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Sed0007326 (gene) of Chayote v1 genome

Gene IDSed0007326
OrganismSechium edule (Chayote v1)
DescriptionCytochrome c oxidase subunit 6B
Genome locationLG01:69651963..69652169
RNA-Seq ExpressionSed0007326
SyntenySed0007326
Gene Ontology termsGO:0005739 - mitochondrion (cellular component)
GO:0045277 - respiratory chain complex IV (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8651459.1 hypothetical protein Csa_002423 [Cucumis sativus]1.3e-1469.01Show/hide
Query:  AAAPLDPHDQMRSRDVSKVARGEQAPRPAHEYGTVSKPPPPSSSSVSS----------DGCGGGEDEDNKV
        +A+ +DPHD+MRSRD+SKVARGEQAPRPAHEYGTVSKPPPPSSSSV S          D   G ED DNKV
Subjt:  AAAPLDPHDQMRSRDVSKVARGEQAPRPAHEYGTVSKPPPPSSSSVSS----------DGCGGGEDEDNKV

XP_019423141.1 PREDICTED: putative cytochrome c oxidase subunit 6b-like [Lupinus angustifolius]1.5e-1368.25Show/hide
Query:  MSAAAPLDPHDQMRSRDVSKVARGEQAPRPAHEYGTVSKPPPPSSSSVSSDG----CGGGEDE
        MSA+AP+DPHD+MR+RDV+KVARGEQAPRPAHEYGTVS PPPPSS++ S++     CG  E +
Subjt:  MSAAAPLDPHDQMRSRDVSKVARGEQAPRPAHEYGTVSKPPPPSSSSVSSDG----CGGGEDE

XP_031737980.1 putative cytochrome c oxidase subunit 6b-like isoform X1 [Cucumis sativus]1.3e-1469.01Show/hide
Query:  AAAPLDPHDQMRSRDVSKVARGEQAPRPAHEYGTVSKPPPPSSSSVSS----------DGCGGGEDEDNKV
        +A+ +DPHD+MRSRD+SKVARGEQAPRPAHEYGTVSKPPPPSSSSV S          D   G ED DNKV
Subjt:  AAAPLDPHDQMRSRDVSKVARGEQAPRPAHEYGTVSKPPPPSSSSVSS----------DGCGGGEDEDNKV

XP_031737981.1 cytochrome c oxidase subunit 6B isoform X2 [Cucumis sativus]1.3e-1469.01Show/hide
Query:  AAAPLDPHDQMRSRDVSKVARGEQAPRPAHEYGTVSKPPPPSSSSVSS----------DGCGGGEDEDNKV
        +A+ +DPHD+MRSRD+SKVARGEQAPRPAHEYGTVSKPPPPSSSSV S          D   G ED DNKV
Subjt:  AAAPLDPHDQMRSRDVSKVARGEQAPRPAHEYGTVSKPPPPSSSSVSS----------DGCGGGEDEDNKV

XP_038886888.1 putative cytochrome c oxidase subunit 6b-like [Benincasa hispida]1.0e-1470Show/hide
Query:  AAAPLDPHDQMRSRDVSKVARGEQAPRPAHEYGTVSKPPPPSSSSVSS----------DGCGGGEDEDNK
        +AA +DPHD+MRSRD+SKV RGEQAPRPAHEYGTVSKPPPPSSSSV S          D   GGED DNK
Subjt:  AAAPLDPHDQMRSRDVSKVARGEQAPRPAHEYGTVSKPPPPSSSSVSS----------DGCGGGEDEDNK

TrEMBL top hitse value%identityAlignment
A0A0A0LEH8 Uncharacterized protein6.5e-1569.01Show/hide
Query:  AAAPLDPHDQMRSRDVSKVARGEQAPRPAHEYGTVSKPPPPSSSSVSS----------DGCGGGEDEDNKV
        +A+ +DPHD+MRSRD+SKVARGEQAPRPAHEYGTVSKPPPPSSSSV S          D   G ED DNKV
Subjt:  AAAPLDPHDQMRSRDVSKVARGEQAPRPAHEYGTVSKPPPPSSSSVSS----------DGCGGGEDEDNKV

A0A1S3CQ05 putative cytochrome c oxidase subunit 6b-like1.6e-1369.57Show/hide
Query:  AAAPLDPHDQMRSRDVSKVARGEQAPRPAHEYGTVSKPPPPSSSSVSS-----DGCGGG---EDEDNKV
        +A+ +DPHD+MRSRDVSKVARGEQAPRPAHEYGTVSKPPPPSS+SV S     D    G   +D+DNKV
Subjt:  AAAPLDPHDQMRSRDVSKVARGEQAPRPAHEYGTVSKPPPPSSSSVSS-----DGCGGG---EDEDNKV

A0A4D6LSG6 Cytochrome c oxidase subunit VIb2.0e-1175.51Show/hide
Query:  AAAPLDPHDQMRSRDVSKVARGEQAPRPAHEYGTVSKPPPPSSSSVSSD
        +AA +DPHD+MR+RDV+KVARGEQAPRPAHEYGTVS PPPPSS+    D
Subjt:  AAAPLDPHDQMRSRDVSKVARGEQAPRPAHEYGTVSKPPPPSSSSVSSD

A0A4P1QQX4 Uncharacterized protein7.2e-1468.25Show/hide
Query:  MSAAAPLDPHDQMRSRDVSKVARGEQAPRPAHEYGTVSKPPPPSSSSVSSDG----CGGGEDE
        MSA+AP+DPHD+MR+RDV+KVARGEQAPRPAHEYGTVS PPPPSS++ S++     CG  E +
Subjt:  MSAAAPLDPHDQMRSRDVSKVARGEQAPRPAHEYGTVSKPPPPSSSSVSSDG----CGGGEDE

A0A5D3E4S8 Putative cytochrome c oxidase subunit 6b-like1.6e-1369.57Show/hide
Query:  AAAPLDPHDQMRSRDVSKVARGEQAPRPAHEYGTVSKPPPPSSSSVSS-----DGCGGG---EDEDNKV
        +A+ +DPHD+MRSRDVSKVARGEQAPRPAHEYGTVSKPPPPSS+SV S     D    G   +D+DNKV
Subjt:  AAAPLDPHDQMRSRDVSKVARGEQAPRPAHEYGTVSKPPPPSSSSVSS-----DGCGGG---EDEDNKV

SwissProt top hitse value%identityAlignment
Q9LPJ2 Putative cytochrome c oxidase subunit 6b-like1.8e-0956.14Show/hide
Query:  AAAPLDPHDQMRSRDVSKVARGEQAPRPAHEYGTVSKPPPPSSSSVSSDGCGGGEDE
        ++A +DPHD+MRSRD+SKVARG+QAPRPAH  GTVS PP   ++  +  G  G E +
Subjt:  AAAPLDPHDQMRSRDVSKVARGEQAPRPAHEYGTVSKPPPPSSSSVSSDGCGGGEDE

Arabidopsis top hitse value%identityAlignment
AT1G32710.1 Cytochrome c oxidase, subunit Vib family protein1.2e-1056.14Show/hide
Query:  AAAPLDPHDQMRSRDVSKVARGEQAPRPAHEYGTVSKPPPPSSSSVSSDGCGGGEDE
        ++A +DPHD+MRSRD+SKVARG+QAPRPAH  GTVS PP   ++  +  G  G E +
Subjt:  AAAPLDPHDQMRSRDVSKVARGEQAPRPAHEYGTVSKPPPPSSSSVSSDGCGGGEDE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGGCGGCGGCTCCGCTCGATCCTCACGACCAGATGAGATCCAGAGACGTCAGCAAGGTGGCTCGGGGTGAGCAAGCCCCACGCCCCGCTCATGAATACGGCACCGT
TTCAAAGCCTCCACCTCCTTCTTCTTCCTCCGTTTCCTCCGACGGTTGTGGTGGTGGCGAAGATGAAGATAATAAGGTTTCCTTTATGAAAATTTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCGGCGGCGGCTCCGCTCGATCCTCACGACCAGATGAGATCCAGAGACGTCAGCAAGGTGGCTCGGGGTGAGCAAGCCCCACGCCCCGCTCATGAATACGGCACCGT
TTCAAAGCCTCCACCTCCTTCTTCTTCCTCCGTTTCCTCCGACGGTTGTGGTGGTGGCGAAGATGAAGATAATAAGGTTTCCTTTATGAAAATTTAG
Protein sequenceShow/hide protein sequence
MSAAAPLDPHDQMRSRDVSKVARGEQAPRPAHEYGTVSKPPPPSSSSVSSDGCGGGEDEDNKVSFMKI