CuGenDBv2

Gene ID	Sed0007339
Organism	Sechium edule (Chayote v1)
Description	Actin
Genome location	LG14:4810504..4811064
RNA-Seq Expression	Sed0007339
Synteny	Sed0007339
Gene Ontology terms	GO:0006488 - dolichol-linked oligosaccharide biosynthetic process (biological process) GO:0005856 - cytoskeleton (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0005524 - ATP binding (molecular function) GO:0106073 - dolichyl pyrophosphate Glc2Man9GlcNAc2 alpha-1,2-glucosyltransferase activity (molecular function)
InterPro domains	IPR004000 - Actin family IPR004001 - Actin, conserved site IPR020902 - Actin/actin-like conserved site IPR043129 - ATPase, nucleotide binding domain

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

AAN08622.1 actin [Phalaenopsis hybrid cultivar]

1.4e-66

100

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Query:  MVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLY
        MVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLY
Subjt:  MVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLY

Query:  ASGRTTGIVLDSGDGVSHTVPIYEGYA
        ASGRTTGIVLDSGDGVSHTVPIYEGYA
Subjt:  ASGRTTGIVLDSGDGVSHTVPIYEGYA

KAG7033838.1 hypothetical protein SDJN02_03563 [Cucurbita argyrosperma subsp. argyrosperma]

1.4e-66

100

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Query:  MVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLY
        MVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLY
Subjt:  MVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLY

Query:  ASGRTTGIVLDSGDGVSHTVPIYEGYA
        ASGRTTGIVLDSGDGVSHTVPIYEGYA
Subjt:  ASGRTTGIVLDSGDGVSHTVPIYEGYA

KAG8367948.1 hypothetical protein BUALT_Bualt16G0125700 [Buddleja alternifolia]

1.4e-66

100

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Query:  MVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLY
        MVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLY
Subjt:  MVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLY

Query:  ASGRTTGIVLDSGDGVSHTVPIYEGYA
        ASGRTTGIVLDSGDGVSHTVPIYEGYA
Subjt:  ASGRTTGIVLDSGDGVSHTVPIYEGYA

XP_008241048.1 PREDICTED: actin [Prunus mume]

1.4e-66

100

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Query:  MVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLY
        MVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLY
Subjt:  MVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLY

Query:  ASGRTTGIVLDSGDGVSHTVPIYEGYA
        ASGRTTGIVLDSGDGVSHTVPIYEGYA
Subjt:  ASGRTTGIVLDSGDGVSHTVPIYEGYA

XP_041998018.1 actin-like [Salvia splendens]

1.4e-66

100

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Query:  MVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLY
        MVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLY
Subjt:  MVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLY

Query:  ASGRTTGIVLDSGDGVSHTVPIYEGYA
        ASGRTTGIVLDSGDGVSHTVPIYEGYA
Subjt:  ASGRTTGIVLDSGDGVSHTVPIYEGYA

TrEMBL top hits

e value

%identity

Alignment

A0A067E8H6 Uncharacterized protein

6.8e-67

100

Show/hide

Query:  MVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLY
        MVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLY
Subjt:  MVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLY

Query:  ASGRTTGIVLDSGDGVSHTVPIYEGYA
        ASGRTTGIVLDSGDGVSHTVPIYEGYA
Subjt:  ASGRTTGIVLDSGDGVSHTVPIYEGYA

A0A2H5NYC1 Uncharacterized protein

6.8e-67

100

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Query:  MVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLY
        MVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLY
Subjt:  MVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLY

Query:  ASGRTTGIVLDSGDGVSHTVPIYEGYA
        ASGRTTGIVLDSGDGVSHTVPIYEGYA
Subjt:  ASGRTTGIVLDSGDGVSHTVPIYEGYA

A0A6I9TDS6 actin

6.8e-67

100

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Query:  MVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLY
        MVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLY
Subjt:  MVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLY

Query:  ASGRTTGIVLDSGDGVSHTVPIYEGYA
        ASGRTTGIVLDSGDGVSHTVPIYEGYA
Subjt:  ASGRTTGIVLDSGDGVSHTVPIYEGYA

A0A6J5V8Q0 Uncharacterized protein

6.8e-67

100

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Query:  MVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLY
        MVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLY
Subjt:  MVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLY

Query:  ASGRTTGIVLDSGDGVSHTVPIYEGYA
        ASGRTTGIVLDSGDGVSHTVPIYEGYA
Subjt:  ASGRTTGIVLDSGDGVSHTVPIYEGYA

M5VYQ8 Uncharacterized protein

6.8e-67

100

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Query:  MVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLY
        MVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLY
Subjt:  MVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLY

Query:  ASGRTTGIVLDSGDGVSHTVPIYEGYA
        ASGRTTGIVLDSGDGVSHTVPIYEGYA
Subjt:  ASGRTTGIVLDSGDGVSHTVPIYEGYA

SwissProt top hits

e value

%identity

Alignment

O81221 Actin

5.3e-69

98.43

Show/hide

Query:  MVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLY
        MVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLY
Subjt:  MVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLY

Query:  ASGRTTGIVLDSGDGVSHTVPIYEGYA
        ASGRTTGIVLDSGDGVSHTVPIYEGYA
Subjt:  ASGRTTGIVLDSGDGVSHTVPIYEGYA

P0CJ46 Actin-1

4.1e-69

99.21

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Query:  MVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLY
        MVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLY
Subjt:  MVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLY

Query:  ASGRTTGIVLDSGDGVSHTVPIYEGYA
        ASGRTTGIVLDSGDGVSHTVPIYEGYA
Subjt:  ASGRTTGIVLDSGDGVSHTVPIYEGYA

P0CJ47 Actin-3

4.1e-69

99.21

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Query:  MVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLY
        MVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLY
Subjt:  MVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLY

Query:  ASGRTTGIVLDSGDGVSHTVPIYEGYA
        ASGRTTGIVLDSGDGVSHTVPIYEGYA
Subjt:  ASGRTTGIVLDSGDGVSHTVPIYEGYA

P30170 Actin-85C (Fragment)

7.0e-69

98.43

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Query:  MVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLY
        MVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLY
Subjt:  MVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLY

Query:  ASGRTTGIVLDSGDGVSHTVPIYEGYA
        ASGRTTGIVLDSGDGVSHTVPIYEGYA
Subjt:  ASGRTTGIVLDSGDGVSHTVPIYEGYA

P53496 Actin-11

7.0e-69

98.43

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Query:  MVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLY
        MVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLY
Subjt:  MVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLY

Query:  ASGRTTGIVLDSGDGVSHTVPIYEGYA
        ASGRTTGIVLDSGDGVSHTVPIYEGYA
Subjt:  ASGRTTGIVLDSGDGVSHTVPIYEGYA

Arabidopsis top hits

e value

%identity

Alignment

AT2G37620.1 actin 1

2.9e-70

99.21

Show/hide

Query:  MVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLY
        MVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLY
Subjt:  MVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLY

Query:  ASGRTTGIVLDSGDGVSHTVPIYEGYA
        ASGRTTGIVLDSGDGVSHTVPIYEGYA
Subjt:  ASGRTTGIVLDSGDGVSHTVPIYEGYA

AT2G37620.2 actin 1

2.9e-70

99.21

Show/hide

Query:  MVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLY
        MVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLY
Subjt:  MVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLY

Query:  ASGRTTGIVLDSGDGVSHTVPIYEGYA
        ASGRTTGIVLDSGDGVSHTVPIYEGYA
Subjt:  ASGRTTGIVLDSGDGVSHTVPIYEGYA

AT3G12110.1 actin-11

5.0e-70

98.43

Show/hide

Query:  MVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLY
        MVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLY
Subjt:  MVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLY

Query:  ASGRTTGIVLDSGDGVSHTVPIYEGYA
        ASGRTTGIVLDSGDGVSHTVPIYEGYA
Subjt:  ASGRTTGIVLDSGDGVSHTVPIYEGYA

AT3G53750.1 actin 3

2.9e-70

99.21

Show/hide

Query:  MVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLY
        MVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLY
Subjt:  MVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLY

Query:  ASGRTTGIVLDSGDGVSHTVPIYEGYA
        ASGRTTGIVLDSGDGVSHTVPIYEGYA
Subjt:  ASGRTTGIVLDSGDGVSHTVPIYEGYA

AT5G09810.1 actin 7

5.0e-70

98.43

Show/hide

Query:  MVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLY
        MVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLY
Subjt:  MVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLY

Query:  ASGRTTGIVLDSGDGVSHTVPIYEGYA
        ASGRTTGIVLDSGDGVSHTVPIYEGYA
Subjt:  ASGRTTGIVLDSGDGVSHTVPIYEGYA

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGTTGGAATGGGACAGAAAGATGCTTATGTGGGGGATGAGGCTCAGTCCAAGCGTGGTATTTTGACTCTCAAATACCCTATTGAGCACGGAATTGTTAGCAACTGGGA
TGACATGGAAAAGATCTGGCATCACACCTTCTATAACGAACTTCGTGTCGCTCCGGAAGAACATCCGATTCTCCTCACTGAGGCACCGCTCAATCCCAAAGCTAACCGTG
AGAAAATGACCCAGATTATGTTTGAGACCTTCAATGCACCAGCTATGTATGTAGCCATTCAAGCTGTTCTTTCCCTTTATGCGAGTGGTCGTACAACTGGTATTGTGCTT
GATTCTGGAGATGGTGTCAGTCACACAGTCCCCATCTACGAAGGATATGCCTTCCGCACGCTATCCTACGTCTCGATCTTGGTGGCCGTGACCTGA

mRNA sequence

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Protein sequence

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MVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVL
DSGDGVSHTVPIYEGYAFRTLSYVSILVAVT

Sed0007339 (gene) of Chayote v1 genome