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Sed0007360 (gene) of Chayote v1 genome

Gene IDSed0007360
OrganismSechium edule (Chayote v1)
DescriptionE3 ubiquitin-protein ligase At1g63170-like
Genome locationLG05:45251973..45252573
RNA-Seq ExpressionSed0007360
SyntenySed0007360
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605180.1 E3 ubiquitin-protein ligase RING1, partial [Cucurbita argyrosperma subsp. sororia]1.6e-3555.21Show/hide
Query:  FANASTLRYSLRRNAAVAADDQILQVRLAHCCRLISRSPSIGLPYDILEETPLSPITDALFPLPLREFEDPLLCRYYVAQLLSSKFNLPAEKCNAVAKKA
        FAN+STLRYSLRR       DQ+LQVRL +  RLISRSP  GLPYDILEE P +PI D LFPLPLRE EDPL C  Y+ +L+SS  NL +  CN +A+K 
Subjt:  FANASTLRYSLRRNAAVAADDQILQVRLAHCCRLISRSPSIGLPYDILEETPLSPITDALFPLPLREFEDPLLCRYYVAQLLSSKFNLPAEKCNAVAKKA

Query:  AAFVAEMAAGDYDEKFQLDVEIDWIDVFWVEEQGNCVRVEQGSSVRGLFVEEIVVLEPVSLPA
         + V + AA DYD KFQL  +ID+I +FW EE    VR       RG+ VEE V+LE   + A
Subjt:  AAFVAEMAAGDYDEKFQLDVEIDWIDVFWVEEQGNCVRVEQGSSVRGLFVEEIVVLEPVSLPA

KAG6605222.1 E3 ubiquitin-protein ligase AMFR, partial [Cucurbita argyrosperma subsp. sororia]2.1e-3857.67Show/hide
Query:  FANASTLRYSLRRNAAVAADDQILQVRLAHCCRLISRSPSIGLPYDILEETPLSPITDALFPLPLREFEDPLLCRYYVAQLLSSKFNLPAEKCNAVAKKA
        FANASTLRYSLRRN      DQ+LQ+RL +  RLISRSPS GLPYDILEETP +P+ DALFPLPLRE EDPL C  Y+ +L+SS FNL +   N + +K 
Subjt:  FANASTLRYSLRRNAAVAADDQILQVRLAHCCRLISRSPSIGLPYDILEETPLSPITDALFPLPLREFEDPLLCRYYVAQLLSSKFNLPAEKCNAVAKKA

Query:  AAFVAEMAAGDYDEKFQLDVEIDWIDVFWVEEQGNCVRVEQGSSVRGLFVEEIVVLEPVSLPA
         +FV + AA DYD KFQL  +ID+I +FW+E++G       GS  RG+ VEE VVLE   + A
Subjt:  AAFVAEMAAGDYDEKFQLDVEIDWIDVFWVEEQGNCVRVEQGSSVRGLFVEEIVVLEPVSLPA

XP_022947841.1 NEP1-interacting protein-like 1 [Cucurbita moschata]1.0e-3757.06Show/hide
Query:  FANASTLRYSLRRNAAVAADDQILQVRLAHCCRLISRSPSIGLPYDILEETPLSPITDALFPLPLREFEDPLLCRYYVAQLLSSKFNLPAEKCNAVAKKA
        FANASTLRYSLRRN      DQ+LQ+RL +  RLISRSPS GLPYDILEETP +P+ DALFPLPLRE EDPL C  Y+ +L+SS FNL +   N + +K 
Subjt:  FANASTLRYSLRRNAAVAADDQILQVRLAHCCRLISRSPSIGLPYDILEETPLSPITDALFPLPLREFEDPLLCRYYVAQLLSSKFNLPAEKCNAVAKKA

Query:  AAFVAEMAAGDYDEKFQLDVEIDWIDVFWVEEQGNCVRVEQGSSVRGLFVEEIVVLEPVSLPA
         +FV + AA DYD KFQL  +ID+I +FW+E+        +GS  RG+ VEE VVLE   + A
Subjt:  AAFVAEMAAGDYDEKFQLDVEIDWIDVFWVEEQGNCVRVEQGSSVRGLFVEEIVVLEPVSLPA

XP_023006825.1 NEP1-interacting protein-like 1 [Cucurbita maxima]2.1e-3554.94Show/hide
Query:  ANASTLRYSLRRNAAVAADDQILQVRLAHCCRLISRSPSIGLPYDILEETPLSPITDALFPLPLREFEDPLLCRYYVAQLLSSKFNLPAEKCNAVAKKAA
        ANASTLRYSLRRN      DQ L+ RL +  RLISRSPS GLPYDILEETP +P+ DALFPLPLRE EDPL C  Y+ +L+SS  NL +  CN + +K  
Subjt:  ANASTLRYSLRRNAAVAADDQILQVRLAHCCRLISRSPSIGLPYDILEETPLSPITDALFPLPLREFEDPLLCRYYVAQLLSSKFNLPAEKCNAVAKKAA

Query:  AFVAEMAAGDYDEKFQLDVEIDWIDVFWVEEQGNCVRVEQGSSVRGLFVEEIVVLEPVSLPA
        + V + AA DYD KFQL  +ID+I +FW+E++        GS  RG+ VEE VVL+   + A
Subjt:  AFVAEMAAGDYDEKFQLDVEIDWIDVFWVEEQGNCVRVEQGSSVRGLFVEEIVVLEPVSLPA

XP_023006830.1 E3 ubiquitin-protein ligase At1g63170-like [Cucurbita maxima]1.0e-3756.36Show/hide
Query:  FANASTLRYSLRRNAAVAADDQILQVRLAHCCRLISRSPSIGLPYDILEETPLSPITDALFPLPLREFEDPLLCRYYVAQLLSSKFNLPAEKCNAVAKKA
        FAN+STLRYSLRR+      DQ+LQVRL +  RLIS+SPS GLPYDILEETPL+PI DALFPLPLRE EDPL C  Y+ +L+SS  NL +  CN + +K 
Subjt:  FANASTLRYSLRRNAAVAADDQILQVRLAHCCRLISRSPSIGLPYDILEETPLSPITDALFPLPLREFEDPLLCRYYVAQLLSSKFNLPAEKCNAVAKKA

Query:  AAFVAEMAAGDYDEKFQLDVEIDWIDVFWVEEQGNCVRVEQGSSVRGLFVEEIVVLEPVSLPAPV
         + V + AA DYD KFQL V+ID+I +FW EE    VR       RG+ VEE +VL+   + A V
Subjt:  AAFVAEMAAGDYDEKFQLDVEIDWIDVFWVEEQGNCVRVEQGSSVRGLFVEEIVVLEPVSLPAPV

TrEMBL top hitse value%identityAlignment
A0A0A0L2F8 Uncharacterized protein4.3e-2649.38Show/hide
Query:  NASTLRYSLRRNAAVAADDQILQVRLAHCCRLISRSPSIGLPYDILEETPLSPITDALFPLPLREFEDPLLCRYYVAQLLSSKFNLPAEKCNAVAKKAAA
        +AST RYS+RR   V   +Q LQ+RL    RL+S SPS GLPY+IL+E+   P+ +A FPLPLR+ ED  LC  Y+ QLLSS FNL       ++KK  +
Subjt:  NASTLRYSLRRNAAVAADDQILQVRLAHCCRLISRSPSIGLPYDILEETPLSPITDALFPLPLREFEDPLLCRYYVAQLLSSKFNLPAEKCNAVAKKAAA

Query:  FVAE-MAAGDYDEKFQLDVEIDWIDV-FWV-EEQGNCVRVEQGSSVRGLFVEEIVVLEPV
         V E + AGDYD KF++  EID I + FW  EE+ + V     S  RG+ VEE VVLE V
Subjt:  FVAE-MAAGDYDEKFQLDVEIDWIDV-FWV-EEQGNCVRVEQGSSVRGLFVEEIVVLEPV

A0A6J1G7L1 NEP1-interacting protein-like 14.9e-3857.06Show/hide
Query:  FANASTLRYSLRRNAAVAADDQILQVRLAHCCRLISRSPSIGLPYDILEETPLSPITDALFPLPLREFEDPLLCRYYVAQLLSSKFNLPAEKCNAVAKKA
        FANASTLRYSLRRN      DQ+LQ+RL +  RLISRSPS GLPYDILEETP +P+ DALFPLPLRE EDPL C  Y+ +L+SS FNL +   N + +K 
Subjt:  FANASTLRYSLRRNAAVAADDQILQVRLAHCCRLISRSPSIGLPYDILEETPLSPITDALFPLPLREFEDPLLCRYYVAQLLSSKFNLPAEKCNAVAKKA

Query:  AAFVAEMAAGDYDEKFQLDVEIDWIDVFWVEEQGNCVRVEQGSSVRGLFVEEIVVLEPVSLPA
         +FV + AA DYD KFQL  +ID+I +FW+E+        +GS  RG+ VEE VVLE   + A
Subjt:  AAFVAEMAAGDYDEKFQLDVEIDWIDVFWVEEQGNCVRVEQGSSVRGLFVEEIVVLEPVSLPA

A0A6J1G7R8 E3 ubiquitin-protein ligase MBR2-like3.0e-3555.83Show/hide
Query:  FANASTLRYSLRRNAAVAADDQILQVRLAHCCRLISRSPSIGLPYDILEETPLSPITDALFPLPLREFEDPLLCRYYVAQLLSSKFNLPAEKCNAVAKKA
        FAN+STLRYSLRR       DQ+LQVRL +  RLISRSP  GLPYDILEETP + I D LFPLPLRE EDPL C  Y+ +L+SS  NL +  CN +A+K 
Subjt:  FANASTLRYSLRRNAAVAADDQILQVRLAHCCRLISRSPSIGLPYDILEETPLSPITDALFPLPLREFEDPLLCRYYVAQLLSSKFNLPAEKCNAVAKKA

Query:  AAFVAEMAAGDYDEKFQLDVEIDWIDVFWVEEQGNCVRVEQGSSVRGLFVEEIVVLEPVSLPA
         + V + AA DYD KFQL  +ID+I +FW EE    VR       RG+ VEE VVLE   + A
Subjt:  AAFVAEMAAGDYDEKFQLDVEIDWIDVFWVEEQGNCVRVEQGSSVRGLFVEEIVVLEPVSLPA

A0A6J1L186 NEP1-interacting protein-like 11.0e-3554.94Show/hide
Query:  ANASTLRYSLRRNAAVAADDQILQVRLAHCCRLISRSPSIGLPYDILEETPLSPITDALFPLPLREFEDPLLCRYYVAQLLSSKFNLPAEKCNAVAKKAA
        ANASTLRYSLRRN      DQ L+ RL +  RLISRSPS GLPYDILEETP +P+ DALFPLPLRE EDPL C  Y+ +L+SS  NL +  CN + +K  
Subjt:  ANASTLRYSLRRNAAVAADDQILQVRLAHCCRLISRSPSIGLPYDILEETPLSPITDALFPLPLREFEDPLLCRYYVAQLLSSKFNLPAEKCNAVAKKAA

Query:  AFVAEMAAGDYDEKFQLDVEIDWIDVFWVEEQGNCVRVEQGSSVRGLFVEEIVVLEPVSLPA
        + V + AA DYD KFQL  +ID+I +FW+E++        GS  RG+ VEE VVL+   + A
Subjt:  AFVAEMAAGDYDEKFQLDVEIDWIDVFWVEEQGNCVRVEQGSSVRGLFVEEIVVLEPVSLPA

A0A6J1L191 E3 ubiquitin-protein ligase At1g63170-like4.9e-3856.36Show/hide
Query:  FANASTLRYSLRRNAAVAADDQILQVRLAHCCRLISRSPSIGLPYDILEETPLSPITDALFPLPLREFEDPLLCRYYVAQLLSSKFNLPAEKCNAVAKKA
        FAN+STLRYSLRR+      DQ+LQVRL +  RLIS+SPS GLPYDILEETPL+PI DALFPLPLRE EDPL C  Y+ +L+SS  NL +  CN + +K 
Subjt:  FANASTLRYSLRRNAAVAADDQILQVRLAHCCRLISRSPSIGLPYDILEETPLSPITDALFPLPLREFEDPLLCRYYVAQLLSSKFNLPAEKCNAVAKKA

Query:  AAFVAEMAAGDYDEKFQLDVEIDWIDVFWVEEQGNCVRVEQGSSVRGLFVEEIVVLEPVSLPAPV
         + V + AA DYD KFQL V+ID+I +FW EE    VR       RG+ VEE +VL+   + A V
Subjt:  AAFVAEMAAGDYDEKFQLDVEIDWIDVFWVEEQGNCVRVEQGSSVRGLFVEEIVVLEPVSLPAPV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGGATTTCGCAAACGCCTCCACCCTCCGCTACTCCCTCCGCCGCAACGCCGCCGTCGCCGCCGACGATCAAATCCTCCAAGTCCGATTAGCGCATTGCTGCCGTCT
GATCTCCCGGTCGCCGTCGATCGGACTTCCGTACGATATACTCGAAGAAACGCCGTTAAGCCCAATCACGGATGCTCTGTTTCCTCTGCCTCTGCGAGAATTCGAAGATC
CGTTACTGTGCCGTTACTACGTGGCCCAATTGCTGTCTTCCAAATTCAACCTCCCCGCCGAAAAATGCAACGCCGTTGCGAAGAAAGCGGCGGCGTTCGTGGCGGAGATG
GCCGCCGGCGACTACGACGAGAAGTTCCAGTTGGATGTGGAGATTGATTGGATCGATGTTTTTTGGGTTGAGGAACAGGGGAATTGTGTTCGTGTGGAACAGGGGAGTTC
TGTTCGTGGTTTATTTGTTGAGGAGATTGTGGTTCTTGAGCCTGTTTCTTTGCCGGCGCCGGTGAGAGGCTCGCCGGAGACGAACATTACCAGGAATTGA
mRNA sequenceShow/hide mRNA sequence
CTTCATCTCTTGGTTTCATAATTCAAAGCAAACAATTCTCAGACTCGGTAACTAACAAACAATGCCGGATTTCGCAAACGCCTCCACCCTCCGCTACTCCCTCCGCCGCA
ACGCCGCCGTCGCCGCCGACGATCAAATCCTCCAAGTCCGATTAGCGCATTGCTGCCGTCTGATCTCCCGGTCGCCGTCGATCGGACTTCCGTACGATATACTCGAAGAA
ACGCCGTTAAGCCCAATCACGGATGCTCTGTTTCCTCTGCCTCTGCGAGAATTCGAAGATCCGTTACTGTGCCGTTACTACGTGGCCCAATTGCTGTCTTCCAAATTCAA
CCTCCCCGCCGAAAAATGCAACGCCGTTGCGAAGAAAGCGGCGGCGTTCGTGGCGGAGATGGCCGCCGGCGACTACGACGAGAAGTTCCAGTTGGATGTGGAGATTGATT
GGATCGATGTTTTTTGGGTTGAGGAACAGGGGAATTGTGTTCGTGTGGAACAGGGGAGTTCTGTTCGTGGTTTATTTGTTGAGGAGATTGTGGTTCTTGAGCCTGTTTCT
TTGCCGGCGCCGGTGAGAGGCTCGCCGGAGACGAACATTACCAGGAATTGA
Protein sequenceShow/hide protein sequence
MPDFANASTLRYSLRRNAAVAADDQILQVRLAHCCRLISRSPSIGLPYDILEETPLSPITDALFPLPLREFEDPLLCRYYVAQLLSSKFNLPAEKCNAVAKKAAAFVAEM
AAGDYDEKFQLDVEIDWIDVFWVEEQGNCVRVEQGSSVRGLFVEEIVVLEPVSLPAPVRGSPETNITRN