; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0007388 (gene) of Chayote v1 genome

Gene IDSed0007388
OrganismSechium edule (Chayote v1)
DescriptionPMD domain-containing protein
Genome locationLG04:21846617..21848233
RNA-Seq ExpressionSed0007388
SyntenySed0007388
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041618.1 hypothetical protein E6C27_scaffold93G00910 [Cucumis melo var. makuwa]8.9e-5654.41Show/hide
Query:  MVHFAERVTSGLKYLVILKDKEKLIKDELSLLAEEPLASTLSPTWQHL-NVKFLSELSRELPFEGNDKAWVLKSSMHGRNYNEDPELTLGRRLIEGETHW
        MV+F ER  SG+++LVIL D+ +  +D LSL+ E+  A   +  W  L N   L  LS E+P      AWVL+SS+H    N    LTLG+RLIEG+T W
Subjt:  MVHFAERVTSGLKYLVILKDKEKLIKDELSLLAEEPLASTLSPTWQHL-NVKFLSELSRELPFEGNDKAWVLKSSMHGRNYNEDPELTLGRRLIEGETHW

Query:  NTIMKIHGDWSFIDFYWEWLEFVVGRNEKVLNQNRLRNVVMASLYTYDHCNDVVRAFCEGWCPRTNTLFTAMGEVSISLWDLWDICGLPIKGRFYEEVIP
         T+ K+ G++ F D YWEWLE VVGRN ++L    L +VV ASLYTYD  +DVVRAFCE WCP TNTL T  GE+SISLWDLW   GLPIKG FYEE+IP
Subjt:  NTIMKIHGDWSFIDFYWEWLEFVVGRNEKVLNQNRLRNVVMASLYTYDHCNDVVRAFCEGWCPRTNTLFTAMGEVSISLWDLWDICGLPIKGRFYEEVIP

Query:  TLQE
        + +E
Subjt:  TLQE

KAA0047478.1 hypothetical protein E6C27_scaffold498G00950 [Cucumis melo var. makuwa]1.8e-5654.9Show/hide
Query:  MVHFAERVTSGLKYLVILKDKEKLIKDELSLLAEEPLASTLSPTWQHL-NVKFLSELSRELPFEGNDKAWVLKSSMHGRNYNEDPELTLGRRLIEGETHW
        MV+F ER  SG+++LVIL D+ +  +D LSL+ E+P A   +  W  L N   L  LS E+P      AWVL+SS+H    N    LTLG+RLIEG+T W
Subjt:  MVHFAERVTSGLKYLVILKDKEKLIKDELSLLAEEPLASTLSPTWQHL-NVKFLSELSRELPFEGNDKAWVLKSSMHGRNYNEDPELTLGRRLIEGETHW

Query:  NTIMKIHGDWSFIDFYWEWLEFVVGRNEKVLNQNRLRNVVMASLYTYDHCNDVVRAFCEGWCPRTNTLFTAMGEVSISLWDLWDICGLPIKGRFYEEVIP
         T+ K+ G++ F D YWEWLE VVGRN ++L   RL   V ASLYTYD  +DVVRAFCE WCP TNTL T  GE+SISLWDLW   GLPIKG FYEE IP
Subjt:  NTIMKIHGDWSFIDFYWEWLEFVVGRNEKVLNQNRLRNVVMASLYTYDHCNDVVRAFCEGWCPRTNTLFTAMGEVSISLWDLWDICGLPIKGRFYEEVIP

Query:  TLQE
        + +E
Subjt:  TLQE

KAA0060611.1 hypothetical protein E6C27_scaffold22G004890 [Cucumis melo var. makuwa]6.8e-5653.92Show/hide
Query:  MVHFAERVTSGLKYLVILKDKEKLIKDELSLLAEEPLASTLSPTWQHL-NVKFLSELSRELPFEGNDKAWVLKSSMHGRNYNEDPELTLGRRLIEGETHW
        MV+F ER  SG+++LVIL D+ +L +D LSL+ E+P A   +  W  L N   L  L  E+P      AWVL+SS+H    N    LTLG+RLIEG+T W
Subjt:  MVHFAERVTSGLKYLVILKDKEKLIKDELSLLAEEPLASTLSPTWQHL-NVKFLSELSRELPFEGNDKAWVLKSSMHGRNYNEDPELTLGRRLIEGETHW

Query:  NTIMKIHGDWSFIDFYWEWLEFVVGRNEKVLNQNRLRNVVMASLYTYDHCNDVVRAFCEGWCPRTNTLFTAMGEVSISLWDLWDICGLPIKGRFYEEVIP
         T++K+ G++ F D YWEWLE VVG+N ++L    L   V ASLYTYD   DVVRAFCE WCP TNTL T  GE+SISLWDLW   GLPIKG FYEE IP
Subjt:  NTIMKIHGDWSFIDFYWEWLEFVVGRNEKVLNQNRLRNVVMASLYTYDHCNDVVRAFCEGWCPRTNTLFTAMGEVSISLWDLWDICGLPIKGRFYEEVIP

Query:  TLQE
        + +E
Subjt:  TLQE

TYK02261.1 hypothetical protein E5676_scaffold18G00620 [Cucumis melo var. makuwa]6.8e-5653.92Show/hide
Query:  MVHFAERVTSGLKYLVILKDKEKLIKDELSLLAEEPLASTLSPTWQHL-NVKFLSELSRELPFEGNDKAWVLKSSMHGRNYNEDPELTLGRRLIEGETHW
        MV+F ER  SG+++LVIL D+ +L +D LSL+ E+P A   +  W  L N   L  L  E+P      AWVL+SS+H    N    LTLG+RLIEG+T W
Subjt:  MVHFAERVTSGLKYLVILKDKEKLIKDELSLLAEEPLASTLSPTWQHL-NVKFLSELSRELPFEGNDKAWVLKSSMHGRNYNEDPELTLGRRLIEGETHW

Query:  NTIMKIHGDWSFIDFYWEWLEFVVGRNEKVLNQNRLRNVVMASLYTYDHCNDVVRAFCEGWCPRTNTLFTAMGEVSISLWDLWDICGLPIKGRFYEEVIP
         T++K+ G++ F D YWEWLE VVG+N ++L    L   V ASLYTYD   DVVRAFCE WCP TNTL T  GE+SISLWDLW   GLPIKG FYEE IP
Subjt:  NTIMKIHGDWSFIDFYWEWLEFVVGRNEKVLNQNRLRNVVMASLYTYDHCNDVVRAFCEGWCPRTNTLFTAMGEVSISLWDLWDICGLPIKGRFYEEVIP

Query:  TLQE
        + +E
Subjt:  TLQE

TYK19639.1 hypothetical protein E5676_scaffold242G00260 [Cucumis melo var. makuwa]8.9e-5654.41Show/hide
Query:  MVHFAERVTSGLKYLVILKDKEKLIKDELSLLAEEPLASTLSPTWQHL-NVKFLSELSRELPFEGNDKAWVLKSSMHGRNYNEDPELTLGRRLIEGETHW
        MV+F ER  SG+++LVIL D+ +  +D LSL+ E+  A   +  W  L N   L  LS E+P      AWVL+SS+H    N    LTLG+RLIEG+T W
Subjt:  MVHFAERVTSGLKYLVILKDKEKLIKDELSLLAEEPLASTLSPTWQHL-NVKFLSELSRELPFEGNDKAWVLKSSMHGRNYNEDPELTLGRRLIEGETHW

Query:  NTIMKIHGDWSFIDFYWEWLEFVVGRNEKVLNQNRLRNVVMASLYTYDHCNDVVRAFCEGWCPRTNTLFTAMGEVSISLWDLWDICGLPIKGRFYEEVIP
         T+ K+ G++ F D YWEWLE VVGRN ++L    L +VV ASLYTYD  +DVVRAFCE WCP TNTL T  GE+SISLWDLW   GLPIKG FYEE+IP
Subjt:  NTIMKIHGDWSFIDFYWEWLEFVVGRNEKVLNQNRLRNVVMASLYTYDHCNDVVRAFCEGWCPRTNTLFTAMGEVSISLWDLWDICGLPIKGRFYEEVIP

Query:  TLQE
        + +E
Subjt:  TLQE

TrEMBL top hitse value%identityAlignment
A0A5A7TFC8 PMD domain-containing protein4.3e-5654.41Show/hide
Query:  MVHFAERVTSGLKYLVILKDKEKLIKDELSLLAEEPLASTLSPTWQHL-NVKFLSELSRELPFEGNDKAWVLKSSMHGRNYNEDPELTLGRRLIEGETHW
        MV+F ER  SG+++LVIL D+ +  +D LSL+ E+  A   +  W  L N   L  LS E+P      AWVL+SS+H    N    LTLG+RLIEG+T W
Subjt:  MVHFAERVTSGLKYLVILKDKEKLIKDELSLLAEEPLASTLSPTWQHL-NVKFLSELSRELPFEGNDKAWVLKSSMHGRNYNEDPELTLGRRLIEGETHW

Query:  NTIMKIHGDWSFIDFYWEWLEFVVGRNEKVLNQNRLRNVVMASLYTYDHCNDVVRAFCEGWCPRTNTLFTAMGEVSISLWDLWDICGLPIKGRFYEEVIP
         T+ K+ G++ F D YWEWLE VVGRN ++L    L +VV ASLYTYD  +DVVRAFCE WCP TNTL T  GE+SISLWDLW   GLPIKG FYEE+IP
Subjt:  NTIMKIHGDWSFIDFYWEWLEFVVGRNEKVLNQNRLRNVVMASLYTYDHCNDVVRAFCEGWCPRTNTLFTAMGEVSISLWDLWDICGLPIKGRFYEEVIP

Query:  TLQE
        + +E
Subjt:  TLQE

A0A5A7TX42 Uncharacterized protein8.7e-5754.9Show/hide
Query:  MVHFAERVTSGLKYLVILKDKEKLIKDELSLLAEEPLASTLSPTWQHL-NVKFLSELSRELPFEGNDKAWVLKSSMHGRNYNEDPELTLGRRLIEGETHW
        MV+F ER  SG+++LVIL D+ +  +D LSL+ E+P A   +  W  L N   L  LS E+P      AWVL+SS+H    N    LTLG+RLIEG+T W
Subjt:  MVHFAERVTSGLKYLVILKDKEKLIKDELSLLAEEPLASTLSPTWQHL-NVKFLSELSRELPFEGNDKAWVLKSSMHGRNYNEDPELTLGRRLIEGETHW

Query:  NTIMKIHGDWSFIDFYWEWLEFVVGRNEKVLNQNRLRNVVMASLYTYDHCNDVVRAFCEGWCPRTNTLFTAMGEVSISLWDLWDICGLPIKGRFYEEVIP
         T+ K+ G++ F D YWEWLE VVGRN ++L   RL   V ASLYTYD  +DVVRAFCE WCP TNTL T  GE+SISLWDLW   GLPIKG FYEE IP
Subjt:  NTIMKIHGDWSFIDFYWEWLEFVVGRNEKVLNQNRLRNVVMASLYTYDHCNDVVRAFCEGWCPRTNTLFTAMGEVSISLWDLWDICGLPIKGRFYEEVIP

Query:  TLQE
        + +E
Subjt:  TLQE

A0A5A7V4F4 PMD domain-containing protein3.3e-5653.92Show/hide
Query:  MVHFAERVTSGLKYLVILKDKEKLIKDELSLLAEEPLASTLSPTWQHL-NVKFLSELSRELPFEGNDKAWVLKSSMHGRNYNEDPELTLGRRLIEGETHW
        MV+F ER  SG+++LVIL D+ +L +D LSL+ E+P A   +  W  L N   L  L  E+P      AWVL+SS+H    N    LTLG+RLIEG+T W
Subjt:  MVHFAERVTSGLKYLVILKDKEKLIKDELSLLAEEPLASTLSPTWQHL-NVKFLSELSRELPFEGNDKAWVLKSSMHGRNYNEDPELTLGRRLIEGETHW

Query:  NTIMKIHGDWSFIDFYWEWLEFVVGRNEKVLNQNRLRNVVMASLYTYDHCNDVVRAFCEGWCPRTNTLFTAMGEVSISLWDLWDICGLPIKGRFYEEVIP
         T++K+ G++ F D YWEWLE VVG+N ++L    L   V ASLYTYD   DVVRAFCE WCP TNTL T  GE+SISLWDLW   GLPIKG FYEE IP
Subjt:  NTIMKIHGDWSFIDFYWEWLEFVVGRNEKVLNQNRLRNVVMASLYTYDHCNDVVRAFCEGWCPRTNTLFTAMGEVSISLWDLWDICGLPIKGRFYEEVIP

Query:  TLQE
        + +E
Subjt:  TLQE

A0A5D3BRA8 PMD domain-containing protein3.3e-5653.92Show/hide
Query:  MVHFAERVTSGLKYLVILKDKEKLIKDELSLLAEEPLASTLSPTWQHL-NVKFLSELSRELPFEGNDKAWVLKSSMHGRNYNEDPELTLGRRLIEGETHW
        MV+F ER  SG+++LVIL D+ +L +D LSL+ E+P A   +  W  L N   L  L  E+P      AWVL+SS+H    N    LTLG+RLIEG+T W
Subjt:  MVHFAERVTSGLKYLVILKDKEKLIKDELSLLAEEPLASTLSPTWQHL-NVKFLSELSRELPFEGNDKAWVLKSSMHGRNYNEDPELTLGRRLIEGETHW

Query:  NTIMKIHGDWSFIDFYWEWLEFVVGRNEKVLNQNRLRNVVMASLYTYDHCNDVVRAFCEGWCPRTNTLFTAMGEVSISLWDLWDICGLPIKGRFYEEVIP
         T++K+ G++ F D YWEWLE VVG+N ++L    L   V ASLYTYD   DVVRAFCE WCP TNTL T  GE+SISLWDLW   GLPIKG FYEE IP
Subjt:  NTIMKIHGDWSFIDFYWEWLEFVVGRNEKVLNQNRLRNVVMASLYTYDHCNDVVRAFCEGWCPRTNTLFTAMGEVSISLWDLWDICGLPIKGRFYEEVIP

Query:  TLQE
        + +E
Subjt:  TLQE

A0A5D3D7V4 PMD domain-containing protein4.3e-5654.41Show/hide
Query:  MVHFAERVTSGLKYLVILKDKEKLIKDELSLLAEEPLASTLSPTWQHL-NVKFLSELSRELPFEGNDKAWVLKSSMHGRNYNEDPELTLGRRLIEGETHW
        MV+F ER  SG+++LVIL D+ +  +D LSL+ E+  A   +  W  L N   L  LS E+P      AWVL+SS+H    N    LTLG+RLIEG+T W
Subjt:  MVHFAERVTSGLKYLVILKDKEKLIKDELSLLAEEPLASTLSPTWQHL-NVKFLSELSRELPFEGNDKAWVLKSSMHGRNYNEDPELTLGRRLIEGETHW

Query:  NTIMKIHGDWSFIDFYWEWLEFVVGRNEKVLNQNRLRNVVMASLYTYDHCNDVVRAFCEGWCPRTNTLFTAMGEVSISLWDLWDICGLPIKGRFYEEVIP
         T+ K+ G++ F D YWEWLE VVGRN ++L    L +VV ASLYTYD  +DVVRAFCE WCP TNTL T  GE+SISLWDLW   GLPIKG FYEE+IP
Subjt:  NTIMKIHGDWSFIDFYWEWLEFVVGRNEKVLNQNRLRNVVMASLYTYDHCNDVVRAFCEGWCPRTNTLFTAMGEVSISLWDLWDICGLPIKGRFYEEVIP

Query:  TLQE
        + +E
Subjt:  TLQE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G50770.1 Aminotransferase-like, plant mobile domain family protein5.0e-0427.03Show/hide
Query:  WLEFVVGRNEKVLNQNRLRNVVMASLYTYDHCNDVVRAFCEGWCPRTNTLFTAMGEVSISLWDLWDICGLPIKG
        W   +   +E +  +  +   V AS Y  +   ++V    E WCP T T     GE +I+L D+  + G  + G
Subjt:  WLEFVVGRNEKVLNQNRLRNVVMASLYTYDHCNDVVRAFCEGWCPRTNTLFTAMGEVSISLWDLWDICGLPIKG

AT1G50790.1 Plant mobile domain protein family2.6e-0528.38Show/hide
Query:  WLEFVVGRNEKVLNQNRLRNVVMASLYTYDHCNDVVRAFCEGWCPRTNTLFTAMGEVSISLWDLWDICGLPIKG
        W   +   +E +  +  +   ++AS Y      D+V    E WCP TNT   + GE +I+L D+  + G  + G
Subjt:  WLEFVVGRNEKVLNQNRLRNVVMASLYTYDHCNDVVRAFCEGWCPRTNTLFTAMGEVSISLWDLWDICGLPIKG

AT1G50820.1 Aminotransferase-like, plant mobile domain family protein5.9e-0527.96Show/hide
Query:  NTIMKIHGDWSFID-FYWEWLEFVVGRNEKVLNQNRLRNVVMASLYTYDHCNDVVRAFCEGWCPRTNTLFTAMGEVSISLWDLWDICGLPIKG
        +T +K  G W F +  +  W   +   +E +  +  +   V+AS Y      D+V    E WCP T T     GE +I+L D+  + G  + G
Subjt:  NTIMKIHGDWSFID-FYWEWLEFVVGRNEKVLNQNRLRNVVMASLYTYDHCNDVVRAFCEGWCPRTNTLFTAMGEVSISLWDLWDICGLPIKG

AT1G51538.1 Aminotransferase-like, plant mobile domain family protein4.5e-0523.6Show/hide
Query:  MKIHGDWSFIDFYWEWLEFVVGRNEKVLNQNRLRNVVMASLYTYDHCNDVVRAFCEGWCPRTNTLFTAMGEVSISLWDLWDICGLPIKG
        +  +G WS    +  W + +   +E +  +  +   + AS+Y       ++ A  E WCP T +     GE +I+L D+  + G  ++G
Subjt:  MKIHGDWSFIDFYWEWLEFVVGRNEKVLNQNRLRNVVMASLYTYDHCNDVVRAFCEGWCPRTNTLFTAMGEVSISLWDLWDICGLPIKG

AT4G16050.1 Aminotransferase-like, plant mobile domain family protein2.9e-0425.68Show/hide
Query:  WLEFVVGRNEKVLNQNRLRNVVMASLYTYDHCNDVVRAFCEGWCPRTNTLFTAMGEVSISLWDLWDICGLPIKG
        W++ +V  ++    ++ +   + AS Y       ++ +  + WCP TNT     GE +I+L D+  + G  I G
Subjt:  WLEFVVGRNEKVLNQNRLRNVVMASLYTYDHCNDVVRAFCEGWCPRTNTLFTAMGEVSISLWDLWDICGLPIKG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACATCTGTGAGCACTTGACGAATGAACATCTGGGAGAACTTACACGTTCCAAGTTTATCCTCCCAATGATCATGGTGCATTTTGCCGAACGCGTTACCTCCGGGTT
GAAGTATTTGGTGATTTTGAAGGATAAAGAGAAGTTAATTAAGGATGAACTGTCTTTACTTGCTGAAGAGCCCTTAGCTAGTACTCTTTCCCCTACATGGCAACACCTGA
ATGTCAAGTTTCTGTCTGAACTATCAAGAGAGTTACCCTTTGAAGGCAATGATAAAGCTTGGGTCTTAAAATCTTCAATGCATGGTCGAAATTATAATGAAGACCCTGAA
CTAACATTAGGGCGTCGCTTGATCGAAGGTGAAACTCATTGGAATACCATTATGAAGATTCATGGTGATTGGTCTTTCATTGATTTTTATTGGGAATGGCTAGAATTTGT
CGTTGGTCGTAATGAGAAAGTGCTTAACCAGAATCGCTTACGTAATGTGGTGATGGCTTCTCTCTATACTTATGATCATTGTAATGATGTGGTTCGTGCTTTCTGTGAAG
GTTGGTGCCCCCGGACGAATACCCTTTTTACCGCAATGGGTGAAGTCTCTATCTCGTTATGGGATTTATGGGATATTTGTGGTCTTCCTATCAAAGGAAGATTTTATGAG
GAGGTTATTCCGACTCTACAAGAGCCGATGGAATATCGAGGTAACTATAAGGTTCTCCTAAAAGTTGTGAACACCTATTCCACGCATATTATAAGATAG
mRNA sequenceShow/hide mRNA sequence
ATGAACATCTGTGAGCACTTGACGAATGAACATCTGGGAGAACTTACACGTTCCAAGTTTATCCTCCCAATGATCATGGTGCATTTTGCCGAACGCGTTACCTCCGGGTT
GAAGTATTTGGTGATTTTGAAGGATAAAGAGAAGTTAATTAAGGATGAACTGTCTTTACTTGCTGAAGAGCCCTTAGCTAGTACTCTTTCCCCTACATGGCAACACCTGA
ATGTCAAGTTTCTGTCTGAACTATCAAGAGAGTTACCCTTTGAAGGCAATGATAAAGCTTGGGTCTTAAAATCTTCAATGCATGGTCGAAATTATAATGAAGACCCTGAA
CTAACATTAGGGCGTCGCTTGATCGAAGGTGAAACTCATTGGAATACCATTATGAAGATTCATGGTGATTGGTCTTTCATTGATTTTTATTGGGAATGGCTAGAATTTGT
CGTTGGTCGTAATGAGAAAGTGCTTAACCAGAATCGCTTACGTAATGTGGTGATGGCTTCTCTCTATACTTATGATCATTGTAATGATGTGGTTCGTGCTTTCTGTGAAG
GTTGGTGCCCCCGGACGAATACCCTTTTTACCGCAATGGGTGAAGTCTCTATCTCGTTATGGGATTTATGGGATATTTGTGGTCTTCCTATCAAAGGAAGATTTTATGAG
GAGGTTATTCCGACTCTACAAGAGCCGATGGAATATCGAGGTAACTATAAGGTTCTCCTAAAAGTTGTGAACACCTATTCCACGCATATTATAAGATAG
Protein sequenceShow/hide protein sequence
MNICEHLTNEHLGELTRSKFILPMIMVHFAERVTSGLKYLVILKDKEKLIKDELSLLAEEPLASTLSPTWQHLNVKFLSELSRELPFEGNDKAWVLKSSMHGRNYNEDPE
LTLGRRLIEGETHWNTIMKIHGDWSFIDFYWEWLEFVVGRNEKVLNQNRLRNVVMASLYTYDHCNDVVRAFCEGWCPRTNTLFTAMGEVSISLWDLWDICGLPIKGRFYE
EVIPTLQEPMEYRGNYKVLLKVVNTYSTHIIR