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Sed0007405 (gene) of Chayote v1 genome

Gene IDSed0007405
OrganismSechium edule (Chayote v1)
DescriptionActin cytoskeleton-regulatory complex protein
Genome locationLG04:43396868..43397700
RNA-Seq ExpressionSed0007405
SyntenySed0007405
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031619.1 hypothetical protein E6C27_scaffold139G003870 [Cucumis melo var. makuwa]3.5e-2774.51Show/hide
Query:  MAKIC-LFCLILVEILLIQAVATSASETERRRLTAAPQPS-VGSGEEPELAEAPEIRRMGKHHGDKSVAGGGVIIGGLVTAIFAAVFCYIRVTRKRDGVD
        MAK C LFCLI+ EILLIQA+ TS + T    L+AAP+P+  G+ E  ++AEAPEIRR+GKHHGDKSVAGGGVIIGGLVTAIFAAVFCYIRVTRKRDGVD
Subjt:  MAKIC-LFCLILVEILLIQAVATSASETERRRLTAAPQPS-VGSGEEPELAEAPEIRRMGKHHGDKSVAGGGVIIGGLVTAIFAAVFCYIRVTRKRDGVD

Query:  SL
        S+
Subjt:  SL

KAE8645753.1 hypothetical protein Csa_020263 [Cucumis sativus]2.9e-2170.33Show/hide
Query:  MAKIC-LFCLILVEILLIQAVATSASETERRRLTAAPQPS-VGSGEEPELAEAPEIRRMGKHHGDKSVAGGGVIIGGLVTAIFAAVFCYIR
        MAKIC LFCLI+ EI LIQA+ TS + T    L+ AP+ S  G+ E  E+AEAPEIRR+GKHHGDKS+AGGGVIIGGLVTA+FAAVFCYIR
Subjt:  MAKIC-LFCLILVEILLIQAVATSASETERRRLTAAPQPS-VGSGEEPELAEAPEIRRMGKHHGDKSVAGGGVIIGGLVTAIFAAVFCYIR

KAG6572323.1 hypothetical protein SDJN03_29051, partial [Cucurbita argyrosperma subsp. sororia]6.0e-2773.27Show/hide
Query:  MAKICLFCLILVEILLIQAVATSASETERRRLTAAPQPS-VGSGEEPELAEAPEIRRMGKHHGDKSVAGGGVIIGGLVTAIFAAVFCYIRVTRKRDGVDS
        MAKI L CLIL +ILLIQA+A++A+ T    ++AAP+PS   + E P LAEAPEIRR+GKHH DKSVAGGGVIIGGLVTA+FAAVFCYIRVTRKRDGVDS
Subjt:  MAKICLFCLILVEILLIQAVATSASETERRRLTAAPQPS-VGSGEEPELAEAPEIRRMGKHHGDKSVAGGGVIIGGLVTAIFAAVFCYIRVTRKRDGVDS

Query:  L
        +
Subjt:  L

KAG7011935.1 hypothetical protein SDJN02_26843, partial [Cucurbita argyrosperma subsp. argyrosperma]8.6e-2672.28Show/hide
Query:  MAKICLFCLILVEILLIQAVATSASETERRRLTAAPQPS-VGSGEEPELAEAPEIRRMGKHHGDKSVAGGGVIIGGLVTAIFAAVFCYIRVTRKRDGVDS
        MAKI L  LIL +ILLIQA+A++A+ T    ++AAP+PS   + E P LAEAPEIRR+GKHH DKSVAGGGVIIGGLVTA+FAAVFCYIRVTRKRDGVDS
Subjt:  MAKICLFCLILVEILLIQAVATSASETERRRLTAAPQPS-VGSGEEPELAEAPEIRRMGKHHGDKSVAGGGVIIGGLVTAIFAAVFCYIRVTRKRDGVDS

Query:  L
        +
Subjt:  L

KDP32228.1 hypothetical protein JCGZ_13835 [Jatropha curcas]1.0e-1863.92Show/hide
Query:  KICLFCLILVEILLIQAVATSASETERRRLTAAPQPSVGSGEEPELAEAPEIRRMGKHH-GDKSVAGGGVIIGGLVTAIFAAVFCYIRVTRKRDGVD
        ++ + CLIL  IL++QA   +A E+E++  + A QP V S  E E AEAPEIRR+GKHH  DKSVAGGGVIIGGLVTAIFAAVFCYIRVTRK+   D
Subjt:  KICLFCLILVEILLIQAVATSASETERRRLTAAPQPSVGSGEEPELAEAPEIRRMGKHH-GDKSVAGGGVIIGGLVTAIFAAVFCYIRVTRKRDGVD

TrEMBL top hitse value%identityAlignment
A0A067E958 Uncharacterized protein1.4e-1857.02Show/hide
Query:  MAKICLFCLILV-EILLIQAVATSA-------SETERRRLTAAPQPSVGSG----EEPELAEAPEIRRMGK---HHGDKSVAGGGVIIGGLVTAIFAAVF
        MA++ L  L +V EIL++QAVA  +       ++ E  R+   P  SV        +PE AEAPEIRR+GK   HH DKSVAGGGVIIGGLVTAIFAAVF
Subjt:  MAKICLFCLILV-EILLIQAVATSA-------SETERRRLTAAPQPSVGSG----EEPELAEAPEIRRMGK---HHGDKSVAGGGVIIGGLVTAIFAAVF

Query:  CYIRVTRKRDGVDS
        CYIRVTRKR+G D+
Subjt:  CYIRVTRKRDGVDS

A0A067KB75 Uncharacterized protein4.9e-1963.92Show/hide
Query:  KICLFCLILVEILLIQAVATSASETERRRLTAAPQPSVGSGEEPELAEAPEIRRMGKHH-GDKSVAGGGVIIGGLVTAIFAAVFCYIRVTRKRDGVD
        ++ + CLIL  IL++QA   +A E+E++  + A QP V S  E E AEAPEIRR+GKHH  DKSVAGGGVIIGGLVTAIFAAVFCYIRVTRK+   D
Subjt:  KICLFCLILVEILLIQAVATSASETERRRLTAAPQPSVGSGEEPELAEAPEIRRMGKHH-GDKSVAGGGVIIGGLVTAIFAAVFCYIRVTRKRDGVD

A0A0A0K3N0 Uncharacterized protein7.6e-2872.55Show/hide
Query:  MAKIC-LFCLILVEILLIQAVATSASETERRRLTAAPQPS-VGSGEEPELAEAPEIRRMGKHHGDKSVAGGGVIIGGLVTAIFAAVFCYIRVTRKRDGVD
        MAKIC LFCLI+ EI LIQA+ TS + T    L+ AP+ S  G+ E  E+AEAPEIRR+GKHHGDKS+AGGGVIIGGLVTA+FAAVFCYIRVTRKRDGVD
Subjt:  MAKIC-LFCLILVEILLIQAVATSASETERRRLTAAPQPS-VGSGEEPELAEAPEIRRMGKHHGDKSVAGGGVIIGGLVTAIFAAVFCYIRVTRKRDGVD

Query:  SL
        S+
Subjt:  SL

A0A2N9IXN3 Uncharacterized protein3.8e-1954.24Show/hide
Query:  MAKICLFCLILVEILLIQAVATSASETERRRL---------------TAAPQPSVGSGEEPE------LAEAPEIRRMGKHHGDKSVAGGGVIIGGLVTA
        M ++ LFCLIL EIL++QA+A  +  +E                     A QP     E PE      +AEAP IRRMGKHH DKS+AGGGVIIGGL TA
Subjt:  MAKICLFCLILVEILLIQAVATSASETERRRL---------------TAAPQPSVGSGEEPE------LAEAPEIRRMGKHHGDKSVAGGGVIIGGLVTA

Query:  IFAAVFCYIRVTRKRDGV
        IFA VFCYIRVTRKRDGV
Subjt:  IFAAVFCYIRVTRKRDGV

A0A5D3C590 Uncharacterized protein1.7e-2774.51Show/hide
Query:  MAKIC-LFCLILVEILLIQAVATSASETERRRLTAAPQPS-VGSGEEPELAEAPEIRRMGKHHGDKSVAGGGVIIGGLVTAIFAAVFCYIRVTRKRDGVD
        MAK C LFCLI+ EILLIQA+ TS + T    L+AAP+P+  G+ E  ++AEAPEIRR+GKHHGDKSVAGGGVIIGGLVTAIFAAVFCYIRVTRKRDGVD
Subjt:  MAKIC-LFCLILVEILLIQAVATSASETERRRLTAAPQPS-VGSGEEPELAEAPEIRRMGKHHGDKSVAGGGVIIGGLVTAIFAAVFCYIRVTRKRDGVD

Query:  SL
        S+
Subjt:  SL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G09280.1 unknown protein1.2e-0940.43Show/hide
Query:  AKICLFCLILVEILLIQAVATSASETERRRLTAAPQPSVGSGEEPELAEAPEIRRMGKHHG--DKSVAGGGVIIGGLVTAIFAAVFCYIRVTRK
        AK  + C +L  +  + A ++ A     R+L     P     E PE++   E  R G HH   ++SVAGGGVI+GGL T     VFCYIR TRK
Subjt:  AKICLFCLILVEILLIQAVATSASETERRRLTAAPQPSVGSGEEPELAEAPEIRRMGKHHG--DKSVAGGGVIIGGLVTAIFAAVFCYIRVTRK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAAAATTTGCCTCTTTTGCTTAATTCTTGTCGAGATCTTGCTGATTCAAGCAGTGGCTACATCTGCCTCAGAAACAGAACGCCGCCGCCTGACGGCGGCGCCACA
GCCATCGGTCGGCAGCGGGGAAGAGCCTGAATTGGCGGAGGCGCCGGAGATCCGGCGGATGGGAAAGCACCACGGCGATAAGTCGGTGGCCGGCGGCGGAGTCATCATCG
GCGGCCTCGTAACGGCCATTTTTGCGGCTGTTTTTTGTTATATTCGGGTTACTAGAAAAAGAGATGGGGTTGATTCTCTTCGTTGA
mRNA sequenceShow/hide mRNA sequence
CAAATCCCAACAAAACAACACACACTTGACTAAACAAGCACCACATTTTGAAAAAAAAATCCATTAAATTCCAAACAAACCCCACAACAAACTCTCTCTATTTAACACCC
AAAAATCTCAATTCCCCCACAAAACACAAATCCCCAACACTGAAATTCAGAAACCCATTTTCACAAACCTCTTTAAATCAATCAAAGCTTCTTCATTTCCAAATCTCATG
GCCAAAATTTGCCTCTTTTGCTTAATTCTTGTCGAGATCTTGCTGATTCAAGCAGTGGCTACATCTGCCTCAGAAACAGAACGCCGCCGCCTGACGGCGGCGCCACAGCC
ATCGGTCGGCAGCGGGGAAGAGCCTGAATTGGCGGAGGCGCCGGAGATCCGGCGGATGGGAAAGCACCACGGCGATAAGTCGGTGGCCGGCGGCGGAGTCATCATCGGCG
GCCTCGTAACGGCCATTTTTGCGGCTGTTTTTTGTTATATTCGGGTTACTAGAAAAAGAGATGGGGTTGATTCTCTTCGTTGAGATTGGTCCAAATTTCAAAGAATTTTT
CTTGATGCATAAATATATTCTTTGGATTCTTACATTTTTTGGGAAGATACTTTTTAGAGTGCTTGTTTCATCGTTTTTTTCCTTTTCTCTTTTGGTCCATAATTTAGTGT
TTTGTGTGTGTGTTGTGTGTTTGGCTCTGAATGTAAAAGGCAATGTTCATAGTCTATATTGAAGATCTAGTTTTTAAAAAAACATAGGAGAAGATCTGATTATCCAAATA
AATTTAGAGCTTTCGTTTCAGTGGTATTCGAGTGAAAATAGTTTTTTTTTTAATAAAAAATTT
Protein sequenceShow/hide protein sequence
MAKICLFCLILVEILLIQAVATSASETERRRLTAAPQPSVGSGEEPELAEAPEIRRMGKHHGDKSVAGGGVIIGGLVTAIFAAVFCYIRVTRKRDGVDSLR