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Sed0007445 (gene) of Chayote v1 genome

Gene IDSed0007445
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG08:39313130..39313566
RNA-Seq ExpressionSed0007445
SyntenySed0007445
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6572977.1 NF-X1-type zinc finger protein NFXL1, partial [Cucurbita argyrosperma subsp. sororia]3.3e-1061.04Show/hide
Query:  MENWKQSSDREN-------GASFPVVHSQVRKIKEESETAVDW---RPEIRP-----PGVNRPISRSPLGFSGRPIS
        ME+WK  ++REN       G  FP VHSQVRKIKEESET +DW   +PEIRP       +NRPISRSPLG SGRPIS
Subjt:  MENWKQSSDREN-------GASFPVVHSQVRKIKEESETAVDW---RPEIRP-----PGVNRPISRSPLGFSGRPIS

KAG6584306.1 DEAD-box ATP-dependent RNA helicase 27, partial [Cucurbita argyrosperma subsp. sororia]5.4e-1364.86Show/hide
Query:  MENWKQSSDREN-GASFPVVHSQVRKIKEESETAVDWR---PEIRPP-----GVNRPISRSPLGFSGRPISVGD
        MENWKQ++  E  G  FP VHSQVRKIKEESE  +DWR   PEI+PP      +NR ISRSPLG SGRPISVG+
Subjt:  MENWKQSSDREN-GASFPVVHSQVRKIKEESETAVDWR---PEIRPP-----GVNRPISRSPLGFSGRPISVGD

KAG7012158.1 hypothetical protein SDJN02_24910, partial [Cucurbita argyrosperma subsp. argyrosperma]4.5e-1262.5Show/hide
Query:  MENWKQSSDREN-------GASFPVVHSQVRKIKEESETAVDW---RPEIRP-----PGVNRPISRSPLGFSGRPISVGD
        ME+WK  ++REN       G  FP VHSQVRKIKEESET +DW   +PEIRP       +NRPISRSPLG SGRPISVGD
Subjt:  MENWKQSSDREN-------GASFPVVHSQVRKIKEESETAVDW---RPEIRP-----PGVNRPISRSPLGFSGRPISVGD

KGN64190.1 hypothetical protein Csa_013611, partial [Cucumis sativus]1.1e-1075Show/hide
Query:  ASFPVVHSQVRKIKEESETAVDWR---PEIRPPGVN-RPISRSPLGFSGRPISVGD
        A FP VHSQVRKIKEES+T +DWR   PEIRPP  + R ISRSPLG SGRPISVGD
Subjt:  ASFPVVHSQVRKIKEESETAVDWR---PEIRPPGVN-RPISRSPLGFSGRPISVGD

TYJ99047.1 hypothetical protein E5676_scaffold248G002510 [Cucumis melo var. makuwa]7.3e-1066.15Show/hide
Query:  KQSSDRENGASFPVVHSQVRKIKEESETAVDWR---PEIRPP-GVNRPISRSPLGFSGRPISVGD
        +++S  +    FP VHSQVRKIKEESET +DWR   PEIRPP    R ISRSPLG SGRPISVGD
Subjt:  KQSSDRENGASFPVVHSQVRKIKEESETAVDWR---PEIRPP-GVNRPISRSPLGFSGRPISVGD

TrEMBL top hitse value%identityAlignment
A0A0A0LQJ2 Uncharacterized protein5.4e-1175Show/hide
Query:  ASFPVVHSQVRKIKEESETAVDWR---PEIRPPGVN-RPISRSPLGFSGRPISVGD
        A FP VHSQVRKIKEES+T +DWR   PEIRPP  + R ISRSPLG SGRPISVGD
Subjt:  ASFPVVHSQVRKIKEESETAVDWR---PEIRPPGVN-RPISRSPLGFSGRPISVGD

A0A0B2SM01 Uncharacterized protein1.1e-0854.29Show/hide
Query:  MENWKQSSDRENGASFPVVHSQVRKIKEESETAVDW---RPEIRP--PGVNRPISRSPLGFSGRPISVGD
        MEN K + D         +HSQV KI++ESE  VDW   +PEIRP    ++R ISRSPLG SGRPISVG+
Subjt:  MENWKQSSDRENGASFPVVHSQVRKIKEESETAVDW---RPEIRP--PGVNRPISRSPLGFSGRPISVGD

A0A151R370 Uncharacterized protein1.3e-0955.56Show/hide
Query:  MENWKQSSDRENGASFPVVHSQVRKIKEESETAVDW---RPEIRPP----GVNRPISRSPLGFSGRPISVGD
        MEN K   D   G     +HSQVRKIK+ESE  +DW   +PE+RP     G +RPISRSPLG SG+PISVG+
Subjt:  MENWKQSSDRENGASFPVVHSQVRKIKEESETAVDW---RPEIRPP----GVNRPISRSPLGFSGRPISVGD

A0A445JUZ4 Uncharacterized protein1.9e-0855.07Show/hide
Query:  MENWKQSSDRENGASFPVVHSQVRKIKEESETAVDW---RPEIRP--PGVNRPISRSPLGFSGRPISVG
        MEN K + D         +HSQV KI++ESE  VDW   +PEIRP    ++R ISRSPLG SGRPISVG
Subjt:  MENWKQSSDRENGASFPVVHSQVRKIKEESETAVDW---RPEIRP--PGVNRPISRSPLGFSGRPISVG

A0A5D3BIV4 Uncharacterized protein3.5e-1066.15Show/hide
Query:  KQSSDRENGASFPVVHSQVRKIKEESETAVDWR---PEIRPP-GVNRPISRSPLGFSGRPISVGD
        +++S  +    FP VHSQVRKIKEESET +DWR   PEIRPP    R ISRSPLG SGRPISVGD
Subjt:  KQSSDRENGASFPVVHSQVRKIKEESETAVDWR---PEIRPP-GVNRPISRSPLGFSGRPISVGD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAACTGGAAGCAGAGCAGCGATCGCGAGAACGGAGCTTCGTTTCCGGTGGTGCATAGCCAGGTGAGGAAGATCAAGGAGGAATCGGAGACCGCCGTCGATTGGCG
GCCGGAGATCAGACCGCCGGGCGTGAACCGGCCCATCTCTCGCTCGCCCCTTGGATTCTCCGGCCGCCCCATTTCGGTGGGGGATTAG
mRNA sequenceShow/hide mRNA sequence
GTTACGTGTGAGACTCGTTTTCTCTCTCTAGAATTGTTGTTATATAAGCCATGGCCGGGCAGTGAGAGAGAGAGAGAGAGAGAGAGGGATTCAGATTCAGAAATGGAGAA
CTGGAAGCAGAGCAGCGATCGCGAGAACGGAGCTTCGTTTCCGGTGGTGCATAGCCAGGTGAGGAAGATCAAGGAGGAATCGGAGACCGCCGTCGATTGGCGGCCGGAGA
TCAGACCGCCGGGCGTGAACCGGCCCATCTCTCGCTCGCCCCTTGGATTCTCCGGCCGCCCCATTTCGGTGGGGGATTAGTCGTAGCCGGAGATCCACAGATTGTATCCA
TTCTTCTCTGTTTTTGTTTCTCTTCTCTTATTCAGATATAGCCTTAACTTTGTTTTTTTCTTTTCTTTTCTTTTTTTCTCCTTTTGTAAATATTATGTTTAATAGAG
Protein sequenceShow/hide protein sequence
MENWKQSSDRENGASFPVVHSQVRKIKEESETAVDWRPEIRPPGVNRPISRSPLGFSGRPISVGD