| GenBank top hits | e value | %identity | Alignment |
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| KAG6605170.1 RNA polymerase sigma factor sigA, partial [Cucurbita argyrosperma subsp. sororia] | 1.4e-254 | 91.54 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFPEKVLYVSDHRLGQSQVSPTKSVVIAKSSANFSPSYPSSNRHTQCIKAVKELVDTPSSPTAEPWLHSTSISEDD
MMATAAIIGLGAAKRLLNSSSYYSDF EKVLY++DHRLGQ+QVS TKSVVIAK SA+FSPSYP SNRH QCIKAVKE VDTPSSPTAEPWLH+T+I ED+
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFPEKVLYVSDHRLGQSQVSPTKSVVIAKSSANFSPSYPSSNRHTQCIKAVKELVDTPSSPTAEPWLHSTSISEDD
Query: EIDLKCTVDALLLLQKSMLEKQWNLSFEQTVSTD---GNTKKKVPVTCSGVSARQRRLSSKRKIQSKHVLMTQPKISKQLKPTISPELLQNRSKGYVKGL
E DLKCTV+ALLLLQKSMLEKQWNLSFEQTVSTD G T+KKVPVTCSGVSARQRR+SSKRKIQSKHV M QPKISKQLKP+ISPELLQNR +GYVKGL
Subjt: EIDLKCTVDALLLLQKSMLEKQWNLSFEQTVSTD---GNTKKKVPVTCSGVSARQRRLSSKRKIQSKHVLMTQPKISKQLKPTISPELLQNRSKGYVKGL
Query: VSEELLSHAEVVRLSMKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
VSEE+L H+EVVRLS KIKVGLALEE KTRLKERL CEPSE+QLAISL+ISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
Subjt: VSEELLSHAEVVRLSMKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
Query: GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREA
GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKV+LQEKGITPS+DRIAESLNMSKKKVKNATEAISKVFSLDREA
Subjt: GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREA
Query: FPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKAEVNELINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTGK
FPSLNGLPGETHHSYIADNRLENNPWHGTDTW LK EVN+LINMTL DREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAK K
Subjt: FPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKAEVNELINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTGK
Query: MEAMLLKH
MEAMLLKH
Subjt: MEAMLLKH
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| XP_016902935.1 PREDICTED: RNA polymerase sigma factor sigA [Cucumis melo] | 9.9e-256 | 92.34 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFPEKVLYVSDHRLGQSQVSPTKSVVIAKSSANFSPSYPSSNRHT-QCIKAVKELVDTPSSPTAEPWLHSTSISED
MMAT AIIGLGAAKRLLNSSSYYSDF EK+LY +D+RLGQ+QVSPTKSVVIAKSSANFSPSYP SNRH+ QCIKAVKE V+TPSSPTAEPWL +T+I ED
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFPEKVLYVSDHRLGQSQVSPTKSVVIAKSSANFSPSYPSSNRHT-QCIKAVKELVDTPSSPTAEPWLHSTSISED
Query: DEIDLKCTVDALLLLQKSMLEKQWNLSFEQTVSTD---GNTKKKVPVTCSGVSARQRRLSSKRKIQSKHVLMTQPKISKQLKPTISPELLQNRSKGYVKG
+E DLKCTV+ALLLLQKSMLEKQWNLSFEQTVSTD T KKVPVTCSGVSARQRR+SSKRKIQSKHV M QPKISKQL+PTISPELLQNR KGYVKG
Subjt: DEIDLKCTVDALLLLQKSMLEKQWNLSFEQTVSTD---GNTKKKVPVTCSGVSARQRRLSSKRKIQSKHVLMTQPKISKQLKPTISPELLQNRSKGYVKG
Query: LVSEELLSHAEVVRLSMKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
L+SEELLSHAEVVRLS KIKVGLALEE KTRLKERLGCEPSEDQLAISLKISRAELRSR+MECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Subjt: LVSEELLSHAEVVRLSMKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Query: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKV+LQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
Subjt: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
Query: AFPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKAEVNELINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTG
AFPSLNGLPGETHHSYIADN LENNPWHGTDTWILKAEVN+LINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKT
Subjt: AFPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKAEVNELINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTG
Query: KMEAMLLKH
KMEAML+KH
Subjt: KMEAMLLKH
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| XP_022148631.1 RNA polymerase sigma factor sigA [Momordica charantia] | 4.0e-257 | 92.52 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFPEKVLYVSDHRLGQSQVSPTKSVVIAKSSANFSPSYPSSNRHTQCIKAVKELVDTPSSPTAEPWLHSTSISEDD
MMATAAIIGLGAAKRLLNSSSYYSDFPEK+LY +DHRLGQSQVSPTKSVVIAKSSANFSPS+PSSNRHTQCIKAVKE VDTPSSPT EPWL +++ ED+
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFPEKVLYVSDHRLGQSQVSPTKSVVIAKSSANFSPSYPSSNRHTQCIKAVKELVDTPSSPTAEPWLHSTSISEDD
Query: EIDLKCTVDALLLLQKSMLEKQWNLSFEQTVSTD---GNTKKKVPVTCSGVSARQRRLSSKRKIQSKHVLMTQPKISKQLKPTISPELLQNRSKGYVKGL
EIDLKCTV+ALLLLQKSMLEKQWNLSFEQTV TD G T+KKVPVTCSGVSARQRR+SSKRKIQSK+ M QPKISKQL+ TISPELLQ R KGYVKGL
Subjt: EIDLKCTVDALLLLQKSMLEKQWNLSFEQTVSTD---GNTKKKVPVTCSGVSARQRRLSSKRKIQSKHVLMTQPKISKQLKPTISPELLQNRSKGYVKGL
Query: VSEELLSHAEVVRLSMKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
VSEELLSHAEVVRLS KIKVGLALEERKTRLKERLGCEPSEDQLAISLKISR ELRSRV+ECSLA+EKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
Subjt: VSEELLSHAEVVRLSMKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
Query: GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREA
GLLRGIEKFDSSKGF+ISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREA
Subjt: GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREA
Query: FPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKAEVNELINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTGK
FPSLNGLPGETHHSYIADN LEN+PWHGTDTWILKAEVN+LINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKT K
Subjt: FPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKAEVNELINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTGK
Query: MEAMLLKH
MEAMLLKH
Subjt: MEAMLLKH
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| XP_023533104.1 RNA polymerase sigma factor sigA-like [Cucurbita pepo subsp. pepo] | 8.4e-255 | 91.54 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFPEKVLYVSDHRLGQSQVSPTKSVVIAKSSANFSPSYPSSNRHTQCIKAVKELVDTPSSPTAEPWLHSTSISEDD
MMATAAIIGLGAAKRLLNSSSYYSDF EKVLY++DHRLGQ+QVS TKSVVIAK SA+FSPSYP SNRH QCIKAVKE VDTPSSPTAEPWLH+T+I ED+
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFPEKVLYVSDHRLGQSQVSPTKSVVIAKSSANFSPSYPSSNRHTQCIKAVKELVDTPSSPTAEPWLHSTSISEDD
Query: EIDLKCTVDALLLLQKSMLEKQWNLSFEQTVSTD---GNTKKKVPVTCSGVSARQRRLSSKRKIQSKHVLMTQPKISKQLKPTISPELLQNRSKGYVKGL
E DLKCTV+ALLLLQKSMLEKQWNLSFEQTVSTD G T+KKVPVTCSGVSARQRR+SSKRKIQSKHV + QPKISKQLKP+ISPELLQNR +GYVKGL
Subjt: EIDLKCTVDALLLLQKSMLEKQWNLSFEQTVSTD---GNTKKKVPVTCSGVSARQRRLSSKRKIQSKHVLMTQPKISKQLKPTISPELLQNRSKGYVKGL
Query: VSEELLSHAEVVRLSMKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
VSEE+L H+EVVRLS KIKVGLALEE KTRLKERL CEPSE+QLAISL+ISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
Subjt: VSEELLSHAEVVRLSMKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
Query: GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREA
GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKV+LQEKGITPS+DRIAESLNMSKKKVKNATEAISKVFSLDREA
Subjt: GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREA
Query: FPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKAEVNELINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTGK
FPSLNGLPGETHHSYIADNRLENNPWHGTDTWILK EVN+LINMTL DREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAK K
Subjt: FPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKAEVNELINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTGK
Query: MEAMLLKH
MEAMLLKH
Subjt: MEAMLLKH
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| XP_038902049.1 RNA polymerase sigma factor sigA [Benincasa hispida] | 4.9e-263 | 94.7 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFPEKVLYV-SDHRLGQSQVSPTKSVVIAKSSANFSPSYPSSNRHTQCIKAVKELVDTPSSPTAEPWLHSTSISED
MMATAAIIGLGAAKRLLNSSSYYSDF EK+LYV +DHRLGQ+QVSPTKSVVIAKSSANFSPSYPSSNRH+QCIKAVKE VDTPSSPTAEPWLH+T+I ED
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFPEKVLYV-SDHRLGQSQVSPTKSVVIAKSSANFSPSYPSSNRHTQCIKAVKELVDTPSSPTAEPWLHSTSISED
Query: DEIDLKCTVDALLLLQKSMLEKQWNLSFEQTVSTD---GNTKKKVPVTCSGVSARQRRLSSKRKIQSKHVLMTQPKISKQLKPTISPELLQNRSKGYVKG
+EIDLKCTV+ALLLLQKSMLEKQWNLSFEQTVSTD G T+KKVPVTCSGVSARQRR+SSKRKIQSKHV M QPKISKQL+PTISPELLQNR KGYVKG
Subjt: DEIDLKCTVDALLLLQKSMLEKQWNLSFEQTVSTD---GNTKKKVPVTCSGVSARQRRLSSKRKIQSKHVLMTQPKISKQLKPTISPELLQNRSKGYVKG
Query: LVSEELLSHAEVVRLSMKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
L+SEELLSHAEVVRLS KIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Subjt: LVSEELLSHAEVVRLSMKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Query: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
Subjt: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
Query: AFPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKAEVNELINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTG
AFPSLNGLPGETHHSYIADN LENNPWHGTDTWILKAEVN+LINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKT
Subjt: AFPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKAEVNELINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTG
Query: KMEAMLLKH
KMEAMLLKH
Subjt: KMEAMLLKH
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A1S4E4N5 RNA polymerase sigma factor sigA | 4.8e-256 | 92.34 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFPEKVLYVSDHRLGQSQVSPTKSVVIAKSSANFSPSYPSSNRHT-QCIKAVKELVDTPSSPTAEPWLHSTSISED
MMAT AIIGLGAAKRLLNSSSYYSDF EK+LY +D+RLGQ+QVSPTKSVVIAKSSANFSPSYP SNRH+ QCIKAVKE V+TPSSPTAEPWL +T+I ED
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFPEKVLYVSDHRLGQSQVSPTKSVVIAKSSANFSPSYPSSNRHT-QCIKAVKELVDTPSSPTAEPWLHSTSISED
Query: DEIDLKCTVDALLLLQKSMLEKQWNLSFEQTVSTD---GNTKKKVPVTCSGVSARQRRLSSKRKIQSKHVLMTQPKISKQLKPTISPELLQNRSKGYVKG
+E DLKCTV+ALLLLQKSMLEKQWNLSFEQTVSTD T KKVPVTCSGVSARQRR+SSKRKIQSKHV M QPKISKQL+PTISPELLQNR KGYVKG
Subjt: DEIDLKCTVDALLLLQKSMLEKQWNLSFEQTVSTD---GNTKKKVPVTCSGVSARQRRLSSKRKIQSKHVLMTQPKISKQLKPTISPELLQNRSKGYVKG
Query: LVSEELLSHAEVVRLSMKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
L+SEELLSHAEVVRLS KIKVGLALEE KTRLKERLGCEPSEDQLAISLKISRAELRSR+MECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Subjt: LVSEELLSHAEVVRLSMKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Query: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKV+LQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
Subjt: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
Query: AFPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKAEVNELINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTG
AFPSLNGLPGETHHSYIADN LENNPWHGTDTWILKAEVN+LINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKT
Subjt: AFPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKAEVNELINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTG
Query: KMEAMLLKH
KMEAML+KH
Subjt: KMEAMLLKH
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| A0A5D3BME8 RNA polymerase sigma factor sigA | 4.8e-256 | 92.34 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFPEKVLYVSDHRLGQSQVSPTKSVVIAKSSANFSPSYPSSNRHT-QCIKAVKELVDTPSSPTAEPWLHSTSISED
MMAT AIIGLGAAKRLLNSSSYYSDF EK+LY +D+RLGQ+QVSPTKSVVIAKSSANFSPSYP SNRH+ QCIKAVKE V+TPSSPTAEPWL +T+I ED
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFPEKVLYVSDHRLGQSQVSPTKSVVIAKSSANFSPSYPSSNRHT-QCIKAVKELVDTPSSPTAEPWLHSTSISED
Query: DEIDLKCTVDALLLLQKSMLEKQWNLSFEQTVSTD---GNTKKKVPVTCSGVSARQRRLSSKRKIQSKHVLMTQPKISKQLKPTISPELLQNRSKGYVKG
+E DLKCTV+ALLLLQKSMLEKQWNLSFEQTVSTD T KKVPVTCSGVSARQRR+SSKRKIQSKHV M QPKISKQL+PTISPELLQNR KGYVKG
Subjt: DEIDLKCTVDALLLLQKSMLEKQWNLSFEQTVSTD---GNTKKKVPVTCSGVSARQRRLSSKRKIQSKHVLMTQPKISKQLKPTISPELLQNRSKGYVKG
Query: LVSEELLSHAEVVRLSMKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
L+SEELLSHAEVVRLS KIKVGLALEE KTRLKERLGCEPSEDQLAISLKISRAELRSR+MECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Subjt: LVSEELLSHAEVVRLSMKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Query: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKV+LQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
Subjt: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
Query: AFPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKAEVNELINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTG
AFPSLNGLPGETHHSYIADN LENNPWHGTDTWILKAEVN+LINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKT
Subjt: AFPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKAEVNELINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTG
Query: KMEAMLLKH
KMEAML+KH
Subjt: KMEAMLLKH
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| A0A6J1D604 RNA polymerase sigma factor sigA | 1.9e-257 | 92.52 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFPEKVLYVSDHRLGQSQVSPTKSVVIAKSSANFSPSYPSSNRHTQCIKAVKELVDTPSSPTAEPWLHSTSISEDD
MMATAAIIGLGAAKRLLNSSSYYSDFPEK+LY +DHRLGQSQVSPTKSVVIAKSSANFSPS+PSSNRHTQCIKAVKE VDTPSSPT EPWL +++ ED+
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFPEKVLYVSDHRLGQSQVSPTKSVVIAKSSANFSPSYPSSNRHTQCIKAVKELVDTPSSPTAEPWLHSTSISEDD
Query: EIDLKCTVDALLLLQKSMLEKQWNLSFEQTVSTD---GNTKKKVPVTCSGVSARQRRLSSKRKIQSKHVLMTQPKISKQLKPTISPELLQNRSKGYVKGL
EIDLKCTV+ALLLLQKSMLEKQWNLSFEQTV TD G T+KKVPVTCSGVSARQRR+SSKRKIQSK+ M QPKISKQL+ TISPELLQ R KGYVKGL
Subjt: EIDLKCTVDALLLLQKSMLEKQWNLSFEQTVSTD---GNTKKKVPVTCSGVSARQRRLSSKRKIQSKHVLMTQPKISKQLKPTISPELLQNRSKGYVKGL
Query: VSEELLSHAEVVRLSMKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
VSEELLSHAEVVRLS KIKVGLALEERKTRLKERLGCEPSEDQLAISLKISR ELRSRV+ECSLA+EKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
Subjt: VSEELLSHAEVVRLSMKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
Query: GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREA
GLLRGIEKFDSSKGF+ISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREA
Subjt: GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREA
Query: FPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKAEVNELINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTGK
FPSLNGLPGETHHSYIADN LEN+PWHGTDTWILKAEVN+LINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKT K
Subjt: FPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKAEVNELINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTGK
Query: MEAMLLKH
MEAMLLKH
Subjt: MEAMLLKH
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| A0A6J1G739 RNA polymerase sigma factor sigA-like | 4.2e-252 | 90.75 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFPEKVLYVSDHRLGQSQVSPTKSVVIAKSSANFSPSYPSSNRHTQCIKAVKELVDTPSSPTAEPWLHSTSISEDD
MMATAAIIGLGAAKRLLNSSSYYSDF EKVLY++DHRLGQ+QVS TKSVVIAK SA+FSPSYP SNRH QCIKAVKE VDTPSSPTAEPWL++T+I ED+
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFPEKVLYVSDHRLGQSQVSPTKSVVIAKSSANFSPSYPSSNRHTQCIKAVKELVDTPSSPTAEPWLHSTSISEDD
Query: EIDLKCTVDALLLLQKSMLEKQWNLSFEQTVSTD---GNTKKKVPVTCSGVSARQRRLSSKRKIQSKHVLMTQPKISKQLKPTISPELLQNRSKGYVKGL
E DLKCTV+ALLLLQKSMLEKQWNLSFEQTVSTD G T+KKVPVTCSGVSARQRR++SKRKIQSKHV M QPKISKQ KP+ISPELLQNR +GYVKGL
Subjt: EIDLKCTVDALLLLQKSMLEKQWNLSFEQTVSTD---GNTKKKVPVTCSGVSARQRRLSSKRKIQSKHVLMTQPKISKQLKPTISPELLQNRSKGYVKGL
Query: VSEELLSHAEVVRLSMKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
VSEE+L H+EVVRLS KIKVGLALEE KTRLKERL CEPSE+QLAISL+IS AELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
Subjt: VSEELLSHAEVVRLSMKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
Query: GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREA
GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKV+LQEKGITPS+DRIAESLNMSKKKVKNATEAISKVFSLDREA
Subjt: GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREA
Query: FPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKAEVNELINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTGK
FPSLNGLPGETHHSYIADNRLENNPWHGTDTW LK EVN+LINMTL DREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAK K
Subjt: FPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKAEVNELINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTGK
Query: MEAMLLKH
MEAMLLKH
Subjt: MEAMLLKH
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| A0A6J1KWY7 RNA polymerase sigma factor sigA-like | 1.0e-253 | 91.14 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFPEKVLYVSDHRLGQSQVSPTKSVVIAKSSANFSPSYPSSNRHTQCIKAVKELVDTPSSPTAEPWLHSTSISEDD
MMATAAIIGLGAAKRLLNSSSYYSDF EKVLY++DHRLGQ+QVS TK VVIAK SA+FSPSY SNRH QCIKAVKE VDTPSSPTAEPWLH+T+I ED+
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFPEKVLYVSDHRLGQSQVSPTKSVVIAKSSANFSPSYPSSNRHTQCIKAVKELVDTPSSPTAEPWLHSTSISEDD
Query: EIDLKCTVDALLLLQKSMLEKQWNLSFEQTVSTD---GNTKKKVPVTCSGVSARQRRLSSKRKIQSKHVLMTQPKISKQLKPTISPELLQNRSKGYVKGL
E DLKCTV+ALLLLQKSMLEKQWNLSFEQTVSTD G T+KKVPVTCSGVSARQRR+SSKRKIQSKHV M QPKISKQLKP ISPELLQNR +GYVKGL
Subjt: EIDLKCTVDALLLLQKSMLEKQWNLSFEQTVSTD---GNTKKKVPVTCSGVSARQRRLSSKRKIQSKHVLMTQPKISKQLKPTISPELLQNRSKGYVKGL
Query: VSEELLSHAEVVRLSMKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
VSEE+L H+EVVRLS KIKVGLALEE KTRLKERL C+PSE+QLAISL+ISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
Subjt: VSEELLSHAEVVRLSMKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
Query: GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREA
GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKV+LQEKGITPS+DRIAESLNMSKKKVKNATEAISKVFSLDREA
Subjt: GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREA
Query: FPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKAEVNELINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTGK
FPSLNGLPGETHHSYIADNRLENNPWHGTDTWILK EVN+LINMTL DREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAK K
Subjt: FPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKAEVNELINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTGK
Query: MEAMLLKH
MEAMLLKH
Subjt: MEAMLLKH
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| SwissProt top hits | e value | %identity | Alignment |
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| O22056 RNA polymerase sigma factor sigB | 4.2e-39 | 34.52 | Show/hide |
Query: SKQLKPTISPELLQNRSKGYVKGLV-SEELLSHAEVVRLSMKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVR
S + K ++ E+ N Y++ S +LL+ E LS I+ L LE +T L ER G +P+ Q A + + + LR R+ +L ++K+ SN+R
Subjt: SKQLKPTISPELLQNRSKGYVKGLV-SEELLSHAEVVRLSMKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVR
Query: LVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRL-QEKGITPSLDRIAE
LV+SIA+ Y G + DLVQ G GL+RG EKFD++KGFK STY +WWI+Q V ++L + SR +RLP H+ E ++ A+ +L E G P + IAE
Subjt: LVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRL-QEKGITPSLDRIAE
Query: SLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGTDTWI---LKAEVNELINMTLGDREREIIRLYHGL-DNECLTWEEI
+ +S K++ + SLD++ + N P E IAD + D I ++ +++++++ +LG RE+++IR G+ D T +EI
Subjt: SLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGTDTWI---LKAEVNELINMTLGDREREIIRLYHGL-DNECLTWEEI
Query: SKRIGLSRERVRQVGLVALEKLKKAAKTGKMEAMLL
+ +G+SRERVRQ+ A KLK + ++ L+
Subjt: SKRIGLSRERVRQVGLVALEKLKKAAKTGKMEAMLL
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| O24629 RNA polymerase sigma factor sigA | 3.4e-190 | 69.19 | Show/hide |
Query: MATAAIIGLGAAKRLLNSSSYYSDFPEKVLYVSDHRLGQSQVSPTKSVVIAKSSANFSPSYPSSNRHTQCIKAVKELVDTPSSPTAEPWLHSTSISE---
MATAA+IGL KRLL+SS Y+SD EK L V+DH Q ++ TKS + AK ++N+SPS+PSSNRHTQ KA+KE VD S T +PWL + + E
Subjt: MATAAIIGLGAAKRLLNSSSYYSDFPEKVLYVSDHRLGQSQVSPTKSVVIAKSSANFSPSYPSSNRHTQCIKAVKELVDTPSSPTAEPWLHSTSISE---
Query: ---DDEIDLKCTVDALLLLQKSMLEKQWNLSFEQTVSTD-----GNTKKKVPV-TCSGVSARQRRLSSKRKIQSKHVLMTQPKISKQLKPTISPELLQNR
DD+ + +V+A+LLLQKSMLEK WNLSFE+ VS++ KKK+PV TCSG+SARQRR+ +K+K HV +S +
Subjt: ---DDEIDLKCTVDALLLLQKSMLEKQWNLSFEQTVSTD-----GNTKKKVPV-TCSGVSARQRRLSSKRKIQSKHVLMTQPKISKQLKPTISPELLQNR
Query: SKGYVKGLVSEELLSHAEVVRLSMKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMA
+GYVKG++SE++LSH EVVRLS KIK GL L++ K+RLK+RLGCEPS++QLA+SLKISRAEL++ +MEC LAREKLAMSNVRLVMSIAQRYDN+GAEM+
Subjt: SKGYVKGLVSEELLSHAEVVRLSMKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMA
Query: DLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISK
DLVQGGLIGLLRGIEKFDSSKGF+ISTYVYWWIRQGVSRALV+NSRTLRLPTHLHERLGLIRNAK+RLQEKGITPS+DRIAESLNMS+KKV+NATEA+SK
Subjt: DLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISK
Query: VFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKAEVNELINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKL
VFSLDR+AFPSLNGLPGETHHSYIAD RLENNPWHG D LK EV++LI+ TLG+RE+EIIRLY+GLD ECLTWE+ISKRIGLSRERVRQVGLVALEKL
Subjt: VFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKAEVNELINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKL
Query: KKAAKTGKMEAMLLKH
K AA+ KMEAM+LK+
Subjt: KKAAKTGKMEAMLLKH
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| P26683 RNA polymerase sigma factor SigA | 3.2e-39 | 34.85 | Show/hide |
Query: YVKGLVSEELLSHAEVVRLSMKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLV
Y++ + LL E + L+ KI L LE + RL E+L +P + + A ++++ R R+ A++K+ SN+RLV+SIA++Y N G DL+
Subjt: YVKGLVSEELLSHAEVVRLSMKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLV
Query: QGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLI-RNAKVRLQEKGITPSLDRIAESLNMSKKKV----KNATEAI
Q G +GL+R EKFD KG+K STY WWIRQ ++RA+ + SRT+RLP HL+E + I + K+ QE G P+ + IA + M+ +K+ K+A I
Subjt: QGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLI-RNAKVRLQEKGITPSLDRIAESLNMSKKKV----KNATEAI
Query: SKVFSLDREAFPSLNGL---PGETHHSYIADNRLENNPWHGTDTWILKAEVNELINMTLGDREREIIRLYHGLDN-ECLTWEEISKRIGLSRERVRQVGL
S + +E L GET ++ N +L+ ++ ++++ +L RER+++RL +GLD+ T EEI + ++RER+RQ+
Subjt: SKVFSLDREAFPSLNGL---PGETHHSYIADNRLENNPWHGTDTWILKAEVNELINMTLGDREREIIRLYHGLDN-ECLTWEEISKRIGLSRERVRQVGL
Query: VALEKLK
AL KL+
Subjt: VALEKLK
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| P38023 RNA polymerase sigma factor SigA1 | 1.9e-39 | 36.48 | Show/hide |
Query: YVKGLVSEELLSHAEVVRLSMKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLV
Y++ + LL E + L+ +I LALE + L E+L PS+ + A ++ E R R+ A++K+ SN+RLV+SIA++Y N G DL+
Subjt: YVKGLVSEELLSHAEVVRLSMKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLV
Query: QGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLI-RNAKVRLQEKGITPSLDRIAESLNMSKKKV----KNATEAI
Q G +GL+R EKFD KG+K STY WWIRQ ++RA+ + SRT+RLP HL+E + I + K+ QE G P+ + IA + M+ +K+ K+A I
Subjt: QGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLI-RNAKVRLQEKGITPSLDRIAESLNMSKKKV----KNATEAI
Query: SKVFSLDREAFPSLNGL---PGETHHSYIADNRLENNPWHGTDTWILKAEVNELINMTLGDREREIIRLYHGLDN-ECLTWEEISKRIGLSRERVRQVGL
S + +E L GET +A N L E E + TL RER+++RL +GLD+ T EEI + ++RER+RQ+
Subjt: SKVFSLDREAFPSLNGL---PGETHHSYIADNRLENNPWHGTDTWILKAEVNELINMTLGDREREIIRLYHGLDN-ECLTWEEISKRIGLSRERVRQVGL
Query: VALEKLK
AL KL+
Subjt: VALEKLK
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| Q0J7T6 RNA polymerase sigma factor sigA | 4.6e-131 | 51.6 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSD-FPEKV-LYVSDHRLG---------QSQVSPT----KSVVIAKSSANFSPS-----YPSSNRHTQCIKAVKELVD
M AT A+IGL A RLL++S +D P+KV L V G S P K +A SP + H+ A+
Subjt: MMATAAIIGLGAAKRLLNSSSYYSD-FPEKV-LYVSDHRLG---------QSQVSPT----KSVVIAKSSANFSPS-----YPSSNRHTQCIKAVKELVD
Query: TPSSPTAEPWLHSTSISEDDEIDLKCTVDALLLLQKSMLEKQWNLSFEQ---------TVSTDGNTKKKVPVTCSGVSARQRRLSSKRKIQSKHVLMTQP
P PT P + DL+ +++A++LLQ+SMLEKQW L F+ D +K V V S VSARQRR+S +R+ ++K
Subjt: TPSSPTAEPWLHSTSISEDDEIDLKCTVDALLLLQKSMLEKQWNLSFEQ---------TVSTDGNTKKKVPVTCSGVSARQRRLSSKRKIQSKHVLMTQP
Query: KISKQLKPTISPELLQNRSKGYVKGLVSEELLSHAEVVRLSMKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNV
+ +SPEL+Q+R++ Y++G VS+ELL+H +VV LS KIK G+ L++++++LKE+LG EPS QLA SLKIS ELRSR+ E LARE L MSN+
Subjt: KISKQLKPTISPELLQNRSKGYVKGLVSEELLSHAEVVRLSMKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNV
Query: RLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAE
RLV+SIAQ+YDN+G E+ADL+QGGLIGLLRGIEKFD+S+GF+ISTYVYWWIRQGVSRAL ENS+T RLPT+LHERL IR AK L+++GI P+++ IA
Subjt: RLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAE
Query: SLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKAEVNELINMTLGDREREIIRLYHGLDNECLTWEEISKRI
SLN+S+KKV NATEA++KV SLD++AFPSLNGLPGET HSYI D + N+PWHG + W LK EVN+L+N TL +RER+IIRLYHG+ +C TWE+IS++
Subjt: SLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKAEVNELINMTLGDREREIIRLYHGLDNECLTWEEISKRI
Query: GLSRERVRQVGLVALEKLKKAAKTGKMEAML
GLSRERVRQVGL+A+EKLK AA+ +EA+L
Subjt: GLSRERVRQVGLVALEKLKKAAKTGKMEAML
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT1G08540.1 RNApolymerase sigma subunit 2 | 3.0e-40 | 34.52 | Show/hide |
Query: SKQLKPTISPELLQNRSKGYVKGLV-SEELLSHAEVVRLSMKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVR
S + K ++ E+ N Y++ S +LL+ E LS I+ L LE +T L ER G +P+ Q A + + + LR R+ +L ++K+ SN+R
Subjt: SKQLKPTISPELLQNRSKGYVKGLV-SEELLSHAEVVRLSMKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVR
Query: LVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRL-QEKGITPSLDRIAE
LV+SIA+ Y G + DLVQ G GL+RG EKFD++KGFK STY +WWI+Q V ++L + SR +RLP H+ E ++ A+ +L E G P + IAE
Subjt: LVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRL-QEKGITPSLDRIAE
Query: SLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGTDTWI---LKAEVNELINMTLGDREREIIRLYHGL-DNECLTWEEI
+ +S K++ + SLD++ + N P E IAD + D I ++ +++++++ +LG RE+++IR G+ D T +EI
Subjt: SLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGTDTWI---LKAEVNELINMTLGDREREIIRLYHGL-DNECLTWEEI
Query: SKRIGLSRERVRQVGLVALEKLKKAAKTGKMEAMLL
+ +G+SRERVRQ+ A KLK + ++ L+
Subjt: SKRIGLSRERVRQVGLVALEKLKKAAKTGKMEAMLL
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| AT1G64860.1 sigma factor A | 2.4e-191 | 69.19 | Show/hide |
Query: MATAAIIGLGAAKRLLNSSSYYSDFPEKVLYVSDHRLGQSQVSPTKSVVIAKSSANFSPSYPSSNRHTQCIKAVKELVDTPSSPTAEPWLHSTSISE---
MATAA+IGL KRLL+SS Y+SD EK L V+DH Q ++ TKS + AK ++N+SPS+PSSNRHTQ KA+KE VD S T +PWL + + E
Subjt: MATAAIIGLGAAKRLLNSSSYYSDFPEKVLYVSDHRLGQSQVSPTKSVVIAKSSANFSPSYPSSNRHTQCIKAVKELVDTPSSPTAEPWLHSTSISE---
Query: ---DDEIDLKCTVDALLLLQKSMLEKQWNLSFEQTVSTD-----GNTKKKVPV-TCSGVSARQRRLSSKRKIQSKHVLMTQPKISKQLKPTISPELLQNR
DD+ + +V+A+LLLQKSMLEK WNLSFE+ VS++ KKK+PV TCSG+SARQRR+ +K+K HV +S +
Subjt: ---DDEIDLKCTVDALLLLQKSMLEKQWNLSFEQTVSTD-----GNTKKKVPV-TCSGVSARQRRLSSKRKIQSKHVLMTQPKISKQLKPTISPELLQNR
Query: SKGYVKGLVSEELLSHAEVVRLSMKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMA
+GYVKG++SE++LSH EVVRLS KIK GL L++ K+RLK+RLGCEPS++QLA+SLKISRAEL++ +MEC LAREKLAMSNVRLVMSIAQRYDN+GAEM+
Subjt: SKGYVKGLVSEELLSHAEVVRLSMKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMA
Query: DLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISK
DLVQGGLIGLLRGIEKFDSSKGF+ISTYVYWWIRQGVSRALV+NSRTLRLPTHLHERLGLIRNAK+RLQEKGITPS+DRIAESLNMS+KKV+NATEA+SK
Subjt: DLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISK
Query: VFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKAEVNELINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKL
VFSLDR+AFPSLNGLPGETHHSYIAD RLENNPWHG D LK EV++LI+ TLG+RE+EIIRLY+GLD ECLTWE+ISKRIGLSRERVRQVGLVALEKL
Subjt: VFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKAEVNELINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKL
Query: KKAAKTGKMEAMLLKH
K AA+ KMEAM+LK+
Subjt: KKAAKTGKMEAMLLKH
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| AT1G64860.2 sigma factor A | 3.4e-177 | 68.26 | Show/hide |
Query: MATAAIIGLGAAKRLLNSSSYYSDFPEKVLYVSDHRLGQSQVSPTKSVVIAKSSANFSPSYPSSNRHTQCIKAVKELVDTPSSPTAEPWLHSTSISE---
MATAA+IGL KRLL+SS Y+SD EK L V+DH Q ++ TKS + AK ++N+SPS+PSSNRHTQ KA+KE VD S T +PWL + + E
Subjt: MATAAIIGLGAAKRLLNSSSYYSDFPEKVLYVSDHRLGQSQVSPTKSVVIAKSSANFSPSYPSSNRHTQCIKAVKELVDTPSSPTAEPWLHSTSISE---
Query: ---DDEIDLKCTVDALLLLQKSMLEKQWNLSFEQTVSTD-----GNTKKKVPV-TCSGVSARQRRLSSKRKIQSKHVLMTQPKISKQLKPTISPELLQNR
DD+ + +V+A+LLLQKSMLEK WNLSFE+ VS++ KKK+PV TCSG+SARQRR+ +K+K HV +S +
Subjt: ---DDEIDLKCTVDALLLLQKSMLEKQWNLSFEQTVSTD-----GNTKKKVPV-TCSGVSARQRRLSSKRKIQSKHVLMTQPKISKQLKPTISPELLQNR
Query: SKGYVKGLVSEELLSHAEVVRLSMKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMA
+GYVKG++SE++LSH EVVRLS KIK GL L++ K+RLK+RLGCEPS++QLA+SLKISRAEL++ +MEC LAREKLAMSNVRLVMSIAQRYDN+GAEM+
Subjt: SKGYVKGLVSEELLSHAEVVRLSMKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMA
Query: DLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISK
DLVQGGLIGLLRGIEKFDSSKGF+ISTYVYWWIRQGVSRALV+NSRTLRLPTHLHERLGLIRNAK+RLQEKGITPS+DRIAESLNMS+KKV+NATEA+SK
Subjt: DLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISK
Query: VFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKAEVNELINMTLGDREREIIRLYHGLDNECLTWEEISKRI
VFSLDR+AFPSLNGLPGETHHSYIAD RLENNPWHG D LK EV++LI+ TLG+RE+EIIRLY+GLD ECLTWE+ISKRI
Subjt: VFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKAEVNELINMTLGDREREIIRLYHGLDNECLTWEEISKRI
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| AT2G36990.1 RNApolymerase sigma-subunit F | 1.3e-35 | 29.75 | Show/hide |
Query: DALLLLQKSM-LEKQWNLSFEQTVSTDGNTKKKVPVTCSGVSARQRR--LSSKRKIQSKHVLMTQPKISKQLKPTISPELLQNRSKG------------Y
D + L QK++ KQ L + T + + K T S +S ++ + SKR+++ + PK + P+ + K +
Subjt: DALLLLQKSM-LEKQWNLSFEQTVSTDGNTKKKVPVTCSGVSARQRR--LSSKRKIQSKHVLMTQPKISKQLKPTISPELLQNRSKG------------Y
Query: VKGLVSEELLSHAEVVRLSMKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQ
+ G +++LL+ E L I+ L LE+ KT+L+ + GCEP+ + A ++ IS L+S + +REKL +N+RLV+ IA++Y N G DL+Q
Subjt: VKGLVSEELLSHAEVVRLSMKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQ
Query: GGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNA-KVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFS
G +GL++ +EKF G + +TY YWWIRQ + +++ +NSRT+RLP +++ LG + A K +QE PS + +A + +S +K+ S
Subjt: GGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNA-KVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFS
Query: LDREAFPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKAEVNELINMTLGDREREIIRLYHGLD-NECLTWEEISKRIGLSRERVRQVGLVALEKLKK
+ + + + T D+ +E P +++ V L+N+ L +ER II+L G+D + + EI + GLS+ERVRQ+ AL +LK+
Subjt: LDREAFPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKAEVNELINMTLGDREREIIRLYHGLD-NECLTWEEISKRIGLSRERVRQVGLVALEKLKK
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| AT5G13730.1 sigma factor 4 | 2.2e-35 | 35.64 | Show/hide |
Query: VKGLVSEELLSHAEVVRLSMKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAELRSRVMEC----SLAREKLAMSNVRLVMSIAQRYDNMGAEMA
V G LS E V+L + +K G LE T ++E + +++ L R + + E AREK+ RLV+SIA Y G +
Subjt: VKGLVSEELLSHAEVVRLSMKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAELRSRVMEC----SLAREKLAMSNVRLVMSIAQRYDNMGAEMA
Query: DLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEK-GITPSLDRIAESLNMSKKKVKNATEAIS
DL+Q G IGLLRG E+FD +G+K+STYVYWWI+Q + RA+ SR ++LP + E + A L K PS + IAE LN++ V+ A E
Subjt: DLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEK-GITPSLDRIAESLNMSKKKVKNATEAIS
Query: KVFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKAEVNELINMTLGDREREIIRLYHGLDNEC-LTWEEISKRIGLSRERVRQVGLVALE
SLDR A + G I E P +K E+ +L+ +L RE ++ LY GL+ E +++EEI K + LSRERVRQ+ +AL+
Subjt: KVFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKAEVNELINMTLGDREREIIRLYHGLDNEC-LTWEEISKRIGLSRERVRQVGLVALE
Query: KLK
KL+
Subjt: KLK
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