CuGenDBv2

Gene ID	Sed0007489
Organism	Sechium edule (Chayote v1)
Description	NERD domain-containing protein
Genome location	LG01:65295643..65303335
RNA-Seq Expression	Sed0007489
Synteny	Sed0007489
Gene Ontology terms	NA
InterPro domains	IPR011528 - Nuclease-related domain, NERD

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6605718.1 hypothetical protein SDJN03_03035, partial [Cucurbita argyrosperma subsp. sororia]

2.3e-158

88.51

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Query:  MWAEIVCGFIAFRVLRRFFFQTDELEIETYDSNALFAAASRLEQIYGGKIFVGLRIPDADTGLRQSIDMVLVTKGEAVVICVKNLSGFVSMSADGSWICE
        M+ EI+CGFIAFR+LRRFF Q DELEIET DSNALFA ASRLE+IY GKIFVGLRIPDADTGLRQSIDMVLVTKGEAVV+ VKNLSGFVS+SADGSWICE
Subjt:  MWAEIVCGFIAFRVLRRFFFQTDELEIETYDSNALFAAASRLEQIYGGKIFVGLRIPDADTGLRQSIDMVLVTKGEAVVICVKNLSGFVSMSADGSWICE

Query:  GDDRQKSEILPDPVAETRRWASILESYLVQRGVALPEGYLSWKVLLPNPKFRTGHSNYFPSEVITYDQWIQLKPEPKSLFSGWIKSALRGGKKEMQESTD
        GD RQKSEILPDPVAETRRWASILESYL +RGV LPEGYLSWKVLLPNPKFRT HSNYFPSEVITYDQW+QLKPEPKS+FSGWIKSALRGGKKE+QES D
Subjt:  GDDRQKSEILPDPVAETRRWASILESYLVQRGVALPEGYLSWKVLLPNPKFRTGHSNYFPSEVITYDQWIQLKPEPKSLFSGWIKSALRGGKKEMQESTD

Query:  QKLNFVLNTAPMWDRLELKGNHFVLGEFLEFKGKKEDMAALREIKRSKVSCIVIQKSRMIGFVPSKFRVLYSTRDYRNDGASASEWKEITIGSSTMVVFQ
        +KLNFVLNTAPMWDRLELKGN+ VLGEFLEFKGKKEDM ALREIKRSKVSCIVIQK R +GF PS+ RVLYSTR+Y+N+G SASEWKEITIGS+TMVVFQ
Subjt:  QKLNFVLNTAPMWDRLELKGNHFVLGEFLEFKGKKEDMAALREIKRSKVSCIVIQKSRMIGFVPSKFRVLYSTRDYRNDGASASEWKEITIGSSTMVVFQ

Query:  MEYSSKVRKIKISSIVSLSLSA
        MEYSSKVRKIKISSIVSLSLSA
Subjt:  MEYSSKVRKIKISSIVSLSLSA

KAG7035626.1 hypothetical protein SDJN02_02424 [Cucurbita argyrosperma subsp. argyrosperma]

5.1e-158

88.51

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Query:  MWAEIVCGFIAFRVLRRFFFQTDELEIETYDSNALFAAASRLEQIYGGKIFVGLRIPDADTGLRQSIDMVLVTKGEAVVICVKNLSGFVSMSADGSWICE
        M+ EI+CGFIAFR+LRRFF Q DELEIET DSNALFA ASRLE+IY GKIFVGLRIPDADTGLRQSIDMVLVTKGEAVV+ VKNLSGFVS+SADGSWICE
Subjt:  MWAEIVCGFIAFRVLRRFFFQTDELEIETYDSNALFAAASRLEQIYGGKIFVGLRIPDADTGLRQSIDMVLVTKGEAVVICVKNLSGFVSMSADGSWICE

Query:  GDDRQKSEILPDPVAETRRWASILESYLVQRGVALPEGYLSWKVLLPNPKFRTGHSNYFPSEVITYDQWIQLKPEPKSLFSGWIKSALRGGKKEMQESTD
        GD RQKSEILPDPVAETRRWASILESYL +RGV LPEGYLSWKVLLPNPKFRT HSNYFPSEVITYDQW+QLKPEPKS+FSGWIKSALRGGKKE+QES D
Subjt:  GDDRQKSEILPDPVAETRRWASILESYLVQRGVALPEGYLSWKVLLPNPKFRTGHSNYFPSEVITYDQWIQLKPEPKSLFSGWIKSALRGGKKEMQESTD

Query:  QKLNFVLNTAPMWDRLELKGNHFVLGEFLEFKGKKEDMAALREIKRSKVSCIVIQKSRMIGFVPSKFRVLYSTRDYRNDGASASEWKEITIGSSTMVVFQ
        +KLNFVLNTAPMWDRLELKGN+ VLGEFLEFKGKKEDM ALREIKRSKVSCIVIQK R IGF PS+ RVLYSTR+Y+N+G SASEWKEITIGS+ MVVFQ
Subjt:  QKLNFVLNTAPMWDRLELKGNHFVLGEFLEFKGKKEDMAALREIKRSKVSCIVIQKSRMIGFVPSKFRVLYSTRDYRNDGASASEWKEITIGSSTMVVFQ

Query:  MEYSSKVRKIKISSIVSLSLSA
        MEYSSKVRKIKISSIVSLSLSA
Subjt:  MEYSSKVRKIKISSIVSLSLSA

XP_004148346.1 uncharacterized protein LOC101206635 isoform X1 [Cucumis sativus]

1.4e-160

88.51

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Query:  MWAEIVCGFIAFRVLRRFFFQTDELEIETYDSNALFAAASRLEQIYGGKIFVGLRIPDADTGLRQSIDMVLVTKGEAVVICVKNLSGFVSMSADGSWICE
        MWAEI+CGF+AFRVLRRFFF  DE+EIET DS+ALFA ASRLE++YGGK FVGLRIPDADTGLRQSIDMVLVTKGEAVVICVKNLSGFVSMSADGSWICE
Subjt:  MWAEIVCGFIAFRVLRRFFFQTDELEIETYDSNALFAAASRLEQIYGGKIFVGLRIPDADTGLRQSIDMVLVTKGEAVVICVKNLSGFVSMSADGSWICE

Query:  GDDRQKSEILPDPVAETRRWASILESYLVQRGVALPEGYLSWKVLLPNPKFRTGHSNYFPSEVITYDQWIQLKPEPKSLFSGWIKSALRGGKKEMQESTD
        GD RQKSEILPDPVAETRRW SILESY  QRGVALPEGYLSWKVLLPNPKFRT HSNYFPSEVI YDQWI LKPEPKS+FSGWIKSA  GGKKEMQ+S D
Subjt:  GDDRQKSEILPDPVAETRRWASILESYLVQRGVALPEGYLSWKVLLPNPKFRTGHSNYFPSEVITYDQWIQLKPEPKSLFSGWIKSALRGGKKEMQESTD

Query:  QKLNFVLNTAPMWDRLELKGNHFVLGEFLEFKGKKEDMAALREIKRSKVSCIVIQKSRMIGFVPSKFRVLYSTRDYRNDGASASEWKEITIGSSTMVVFQ
        QKLNFVLNTAPMWDRLEL GN+ VLGEFLEFK KKEDM ALREI+RSKVSCI+IQK R IGFVPS+FRVLYSTRDYRN+GASASEWKE+T+GSSTMVVFQ
Subjt:  QKLNFVLNTAPMWDRLELKGNHFVLGEFLEFKGKKEDMAALREIKRSKVSCIVIQKSRMIGFVPSKFRVLYSTRDYRNDGASASEWKEITIGSSTMVVFQ

Query:  MEYSSKVRKIKISSIVSLSLSA
        MEYSSKVRK+KISSIVSLSLSA
Subjt:  MEYSSKVRKIKISSIVSLSLSA

XP_022957721.1 uncharacterized protein LOC111459180 [Cucurbita moschata]

2.7e-159

89.13

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Query:  MWAEIVCGFIAFRVLRRFFFQTDELEIETYDSNALFAAASRLEQIYGGKIFVGLRIPDADTGLRQSIDMVLVTKGEAVVICVKNLSGFVSMSADGSWICE
        M+ EI+CGFIAFR+LRRFF Q DELEIET DSNALFA ASRLE+IY GKIFVGLRIPDADTGLRQSIDMVLVTKGEAVV+ VKNLSGFVS+SADGSWICE
Subjt:  MWAEIVCGFIAFRVLRRFFFQTDELEIETYDSNALFAAASRLEQIYGGKIFVGLRIPDADTGLRQSIDMVLVTKGEAVVICVKNLSGFVSMSADGSWICE

Query:  GDDRQKSEILPDPVAETRRWASILESYLVQRGVALPEGYLSWKVLLPNPKFRTGHSNYFPSEVITYDQWIQLKPEPKSLFSGWIKSALRGGKKEMQESTD
        GD RQKSEILPDPVAETRRWASILESYL +RGVALPEGYLSWKVLLPNPKFRT HSNYFPSEVITYDQW+QLKPEPKS+FSGWIKSALRGGKKE+QES D
Subjt:  GDDRQKSEILPDPVAETRRWASILESYLVQRGVALPEGYLSWKVLLPNPKFRTGHSNYFPSEVITYDQWIQLKPEPKSLFSGWIKSALRGGKKEMQESTD

Query:  QKLNFVLNTAPMWDRLELKGNHFVLGEFLEFKGKKEDMAALREIKRSKVSCIVIQKSRMIGFVPSKFRVLYSTRDYRNDGASASEWKEITIGSSTMVVFQ
        +KLNFVLNTAPMWDRLELKGN+ VLGEFLEFKGKKEDM ALREIKRSKVSCIVIQK R IGF PS+ RVLYSTR+Y+N+G SASEWKEITIGS+TMVVFQ
Subjt:  QKLNFVLNTAPMWDRLELKGNHFVLGEFLEFKGKKEDMAALREIKRSKVSCIVIQKSRMIGFVPSKFRVLYSTRDYRNDGASASEWKEITIGSSTMVVFQ

Query:  MEYSSKVRKIKISSIVSLSLSA
        MEYSSKVRKIKISSIVSLSLSA
Subjt:  MEYSSKVRKIKISSIVSLSLSA

XP_022995191.1 uncharacterized protein LOC111490811 [Cucurbita maxima]

2.7e-159

89.44

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Query:  MWAEIVCGFIAFRVLRRFFFQTDELEIETYDSNALFAAASRLEQIYGGKIFVGLRIPDADTGLRQSIDMVLVTKGEAVVICVKNLSGFVSMSADGSWICE
        MW EI+CGFIAFR+LRRFF Q D LEIET DSNALFA ASRLE+IY GKIFVGLRIPDADTGLRQSIDMVLVTKGEAVV+ VKNLSGFVS+SADGSWICE
Subjt:  MWAEIVCGFIAFRVLRRFFFQTDELEIETYDSNALFAAASRLEQIYGGKIFVGLRIPDADTGLRQSIDMVLVTKGEAVVICVKNLSGFVSMSADGSWICE

Query:  GDDRQKSEILPDPVAETRRWASILESYLVQRGVALPEGYLSWKVLLPNPKFRTGHSNYFPSEVITYDQWIQLKPEPKSLFSGWIKSALRGGKKEMQESTD
        GD RQKSEILPDPVAETRRWASILESYL +RGVALPEGYLSWKVLLPNPKFRT HSNYFPSEVITYDQWIQLKPE KS+FSGWIKSALRGGKKEMQES D
Subjt:  GDDRQKSEILPDPVAETRRWASILESYLVQRGVALPEGYLSWKVLLPNPKFRTGHSNYFPSEVITYDQWIQLKPEPKSLFSGWIKSALRGGKKEMQESTD

Query:  QKLNFVLNTAPMWDRLELKGNHFVLGEFLEFKGKKEDMAALREIKRSKVSCIVIQKSRMIGFVPSKFRVLYSTRDYRNDGASASEWKEITIGSSTMVVFQ
        +KLNFVLNTAPMWDRLELKGN+ VLGEFLEFKGKKEDM ALREIKRSKVSCIVIQK R IGF PS+ RVLYSTR+Y+N+G SASEWKEITIGS+TMVVFQ
Subjt:  QKLNFVLNTAPMWDRLELKGNHFVLGEFLEFKGKKEDMAALREIKRSKVSCIVIQKSRMIGFVPSKFRVLYSTRDYRNDGASASEWKEITIGSSTMVVFQ

Query:  MEYSSKVRKIKISSIVSLSLSA
        MEYSSKVRKIKISSIVSLSLSA
Subjt:  MEYSSKVRKIKISSIVSLSLSA

TrEMBL top hits

e value

%identity

Alignment

A0A061EYI0 Plasma membrane isoform 1

1.6e-128

70.81

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Query:  MWAEIVCGFIAFRVLRRFFFQTDELEIETYDSNALFAAASRLEQIYGGKIFVGLRIPDADTGLRQSIDMVLVTKGEAVVICVKNLSGFVSMSADGSWICE
        MW EI+CG I +R+ RRFF+  D LE+ET DSNA+F+ A+RLE++YGGK++VGL IPDADTG RQ+IDMVLVTKGEA VI VKNL+GFVS+S DGSW CE
Subjt:  MWAEIVCGFIAFRVLRRFFFQTDELEIETYDSNALFAAASRLEQIYGGKIFVGLRIPDADTGLRQSIDMVLVTKGEAVVICVKNLSGFVSMSADGSWICE

Query:  GDDRQKSEILPDPVAETRRWASILESYLVQRGVALPEGYLSWKVLLPNPKFRTGHSNYFPSEVITYDQWIQLKPEPKSLFSGWIKSALRGGKKEMQESTD
        G    ++E  PDPVAE ++ AS+LESYL QRGVALPEGY S+KV++PNPKFRT + N FPSEVITYDQW+QLKPEPKS+FSGWIK A RGGKKEMQES  
Subjt:  GDDRQKSEILPDPVAETRRWASILESYLVQRGVALPEGYLSWKVLLPNPKFRTGHSNYFPSEVITYDQWIQLKPEPKSLFSGWIKSALRGGKKEMQESTD

Query:  QKLNFVLNTAPMWDRLELKGNHFVLGEFLEFKGKKEDMAALREIKRSKVSCIVIQKSRMIGFVPSKFRVLYSTRDYRNDGASASEWKEITIGSSTMVVFQ
        Q+LNF+L+TAPMWDRLELKGN +VLGEFLEFKGK+ED  ALR IKRSKVS ++IQK+ M G   SK +VLYS RDYR++GASASEWKE+T+ SST V+FQ
Subjt:  QKLNFVLNTAPMWDRLELKGNHFVLGEFLEFKGKKEDMAALREIKRSKVSCIVIQKSRMIGFVPSKFRVLYSTRDYRNDGASASEWKEITIGSSTMVVFQ

Query:  MEYSSKVRKIKISSIVSLSLSA
         + S+KVRK K+SSI S+SLSA
Subjt:  MEYSSKVRKIKISSIVSLSLSA

A0A0A0LKG9 NERD domain-containing protein

7.0e-161

88.51

Show/hide

Query:  MWAEIVCGFIAFRVLRRFFFQTDELEIETYDSNALFAAASRLEQIYGGKIFVGLRIPDADTGLRQSIDMVLVTKGEAVVICVKNLSGFVSMSADGSWICE
        MWAEI+CGF+AFRVLRRFFF  DE+EIET DS+ALFA ASRLE++YGGK FVGLRIPDADTGLRQSIDMVLVTKGEAVVICVKNLSGFVSMSADGSWICE
Subjt:  MWAEIVCGFIAFRVLRRFFFQTDELEIETYDSNALFAAASRLEQIYGGKIFVGLRIPDADTGLRQSIDMVLVTKGEAVVICVKNLSGFVSMSADGSWICE

Query:  GDDRQKSEILPDPVAETRRWASILESYLVQRGVALPEGYLSWKVLLPNPKFRTGHSNYFPSEVITYDQWIQLKPEPKSLFSGWIKSALRGGKKEMQESTD
        GD RQKSEILPDPVAETRRW SILESY  QRGVALPEGYLSWKVLLPNPKFRT HSNYFPSEVI YDQWI LKPEPKS+FSGWIKSA  GGKKEMQ+S D
Subjt:  GDDRQKSEILPDPVAETRRWASILESYLVQRGVALPEGYLSWKVLLPNPKFRTGHSNYFPSEVITYDQWIQLKPEPKSLFSGWIKSALRGGKKEMQESTD

Query:  QKLNFVLNTAPMWDRLELKGNHFVLGEFLEFKGKKEDMAALREIKRSKVSCIVIQKSRMIGFVPSKFRVLYSTRDYRNDGASASEWKEITIGSSTMVVFQ
        QKLNFVLNTAPMWDRLEL GN+ VLGEFLEFK KKEDM ALREI+RSKVSCI+IQK R IGFVPS+FRVLYSTRDYRN+GASASEWKE+T+GSSTMVVFQ
Subjt:  QKLNFVLNTAPMWDRLELKGNHFVLGEFLEFKGKKEDMAALREIKRSKVSCIVIQKSRMIGFVPSKFRVLYSTRDYRNDGASASEWKEITIGSSTMVVFQ

Query:  MEYSSKVRKIKISSIVSLSLSA
        MEYSSKVRK+KISSIVSLSLSA
Subjt:  MEYSSKVRKIKISSIVSLSLSA

A0A6J1DTU9 uncharacterized protein LOC111023945

1.5e-155

85.4

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Query:  MWAEIVCGFIAFRVLRRFFFQTDELEIETYDSNALFAAASRLEQIYGGKIFVGLRIPDADTGLRQSIDMVLVTKGEAVVICVKNLSGFVSMSADGSWICE
        MWAEI+CGFIAFRVLRRFF   DE+EIE  DSNA+FAAASRLE++YGG++F+GLRIPDADTG RQSIDMVLVTKG+AVVI VKNLSG VS+SADGSWICE
Subjt:  MWAEIVCGFIAFRVLRRFFFQTDELEIETYDSNALFAAASRLEQIYGGKIFVGLRIPDADTGLRQSIDMVLVTKGEAVVICVKNLSGFVSMSADGSWICE

Query:  GDDRQKSEILPDPVAETRRWASILESYLVQRGVALPEGYLSWKVLLPNPKFRTGHSNYFPSEVITYDQWIQLKPEPKSLFSGWIKSALRGGKKEMQESTD
        GD  Q+SEI+PDPV ETRRWASILESYL QRGVALPEGYLS KVLLPNPKFRT H NYFPSEV+TYDQ+IQLKPEPKS FSGWIK ALRGGKKEMQES D
Subjt:  GDDRQKSEILPDPVAETRRWASILESYLVQRGVALPEGYLSWKVLLPNPKFRTGHSNYFPSEVITYDQWIQLKPEPKSLFSGWIKSALRGGKKEMQESTD

Query:  QKLNFVLNTAPMWDRLELKGNHFVLGEFLEFKGKKEDMAALREIKRSKVSCIVIQKSRMIGFVPSKFRVLYSTRDYRNDGASASEWKEITIGSSTMVVFQ
        QKLNFVLNTAPMWDRLELKGN+F+LGEF+EFKGKKEDM ALR+IKRSKVSCIVIQ+ RMI FVPS+FRVLYS RDYRNDGASASEWKE+T+GSST+VVFQ
Subjt:  QKLNFVLNTAPMWDRLELKGNHFVLGEFLEFKGKKEDMAALREIKRSKVSCIVIQKSRMIGFVPSKFRVLYSTRDYRNDGASASEWKEITIGSSTMVVFQ

Query:  MEYSSKVRKIKISSIVSLSLSA
        MEYSSKVRKIKIS+I SLSLSA
Subjt:  MEYSSKVRKIKISSIVSLSLSA

A0A6J1H014 uncharacterized protein LOC111459180

1.3e-159

89.13

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Query:  MWAEIVCGFIAFRVLRRFFFQTDELEIETYDSNALFAAASRLEQIYGGKIFVGLRIPDADTGLRQSIDMVLVTKGEAVVICVKNLSGFVSMSADGSWICE
        M+ EI+CGFIAFR+LRRFF Q DELEIET DSNALFA ASRLE+IY GKIFVGLRIPDADTGLRQSIDMVLVTKGEAVV+ VKNLSGFVS+SADGSWICE
Subjt:  MWAEIVCGFIAFRVLRRFFFQTDELEIETYDSNALFAAASRLEQIYGGKIFVGLRIPDADTGLRQSIDMVLVTKGEAVVICVKNLSGFVSMSADGSWICE

Query:  GDDRQKSEILPDPVAETRRWASILESYLVQRGVALPEGYLSWKVLLPNPKFRTGHSNYFPSEVITYDQWIQLKPEPKSLFSGWIKSALRGGKKEMQESTD
        GD RQKSEILPDPVAETRRWASILESYL +RGVALPEGYLSWKVLLPNPKFRT HSNYFPSEVITYDQW+QLKPEPKS+FSGWIKSALRGGKKE+QES D
Subjt:  GDDRQKSEILPDPVAETRRWASILESYLVQRGVALPEGYLSWKVLLPNPKFRTGHSNYFPSEVITYDQWIQLKPEPKSLFSGWIKSALRGGKKEMQESTD

Query:  QKLNFVLNTAPMWDRLELKGNHFVLGEFLEFKGKKEDMAALREIKRSKVSCIVIQKSRMIGFVPSKFRVLYSTRDYRNDGASASEWKEITIGSSTMVVFQ
        +KLNFVLNTAPMWDRLELKGN+ VLGEFLEFKGKKEDM ALREIKRSKVSCIVIQK R IGF PS+ RVLYSTR+Y+N+G SASEWKEITIGS+TMVVFQ
Subjt:  QKLNFVLNTAPMWDRLELKGNHFVLGEFLEFKGKKEDMAALREIKRSKVSCIVIQKSRMIGFVPSKFRVLYSTRDYRNDGASASEWKEITIGSSTMVVFQ

Query:  MEYSSKVRKIKISSIVSLSLSA
        MEYSSKVRKIKISSIVSLSLSA
Subjt:  MEYSSKVRKIKISSIVSLSLSA

A0A6J1K1B0 uncharacterized protein LOC111490811

1.3e-159

89.44

Show/hide

Query:  MWAEIVCGFIAFRVLRRFFFQTDELEIETYDSNALFAAASRLEQIYGGKIFVGLRIPDADTGLRQSIDMVLVTKGEAVVICVKNLSGFVSMSADGSWICE
        MW EI+CGFIAFR+LRRFF Q D LEIET DSNALFA ASRLE+IY GKIFVGLRIPDADTGLRQSIDMVLVTKGEAVV+ VKNLSGFVS+SADGSWICE
Subjt:  MWAEIVCGFIAFRVLRRFFFQTDELEIETYDSNALFAAASRLEQIYGGKIFVGLRIPDADTGLRQSIDMVLVTKGEAVVICVKNLSGFVSMSADGSWICE

Query:  GDDRQKSEILPDPVAETRRWASILESYLVQRGVALPEGYLSWKVLLPNPKFRTGHSNYFPSEVITYDQWIQLKPEPKSLFSGWIKSALRGGKKEMQESTD
        GD RQKSEILPDPVAETRRWASILESYL +RGVALPEGYLSWKVLLPNPKFRT HSNYFPSEVITYDQWIQLKPE KS+FSGWIKSALRGGKKEMQES D
Subjt:  GDDRQKSEILPDPVAETRRWASILESYLVQRGVALPEGYLSWKVLLPNPKFRTGHSNYFPSEVITYDQWIQLKPEPKSLFSGWIKSALRGGKKEMQESTD

Query:  QKLNFVLNTAPMWDRLELKGNHFVLGEFLEFKGKKEDMAALREIKRSKVSCIVIQKSRMIGFVPSKFRVLYSTRDYRNDGASASEWKEITIGSSTMVVFQ
        +KLNFVLNTAPMWDRLELKGN+ VLGEFLEFKGKKEDM ALREIKRSKVSCIVIQK R IGF PS+ RVLYSTR+Y+N+G SASEWKEITIGS+TMVVFQ
Subjt:  QKLNFVLNTAPMWDRLELKGNHFVLGEFLEFKGKKEDMAALREIKRSKVSCIVIQKSRMIGFVPSKFRVLYSTRDYRNDGASASEWKEITIGSSTMVVFQ

Query:  MEYSSKVRKIKISSIVSLSLSA
        MEYSSKVRKIKISSIVSLSLSA
Subjt:  MEYSSKVRKIKISSIVSLSLSA

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G65020.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NERD (InterPro:IPR011528); Has 69 Blast hits to 69 proteins in 27 species: Archae - 0; Bacteria - 18; Metazoa - 8; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink).

5.5e-110

60.56

Show/hide

Query:  MWAEIVCGFIAFRVLRRFFFQTDELEIETYDSNALFAAASRLEQIYGGKIFVGLRIPDADTGLRQSIDMVLVTKGEAVVICVKNLSGFVSMSADGSWICE
        MW EI+CG + ++++RRFF+  +  ++ET DS ALF+ A RLE++YGGK +VGLRIPDADT  RQ ID+VLVTKG+ VVI VKNLSG V++++DGSW+CE
Subjt:  MWAEIVCGFIAFRVLRRFFFQTDELEIETYDSNALFAAASRLEQIYGGKIFVGLRIPDADTGLRQSIDMVLVTKGEAVVICVKNLSGFVSMSADGSWICE

Query:  GDDRQKSEILPDPVAETRRWASILESYLVQRGVALPEGYLSWKVLLPNPKFRTGHSNYFPSEVITYDQWIQLKPEPKSLFSGWIKSALRGGKKEMQESTD
        G     +E  PDP+AE ++ AS+LESYL QRGV L EG +S KV++PNP FRT H+  FPSEVITY+ W QLKP  KS  SGW+K A   G KEMQES+ 
Subjt:  GDDRQKSEILPDPVAETRRWASILESYLVQRGVALPEGYLSWKVLLPNPKFRTGHSNYFPSEVITYDQWIQLKPEPKSLFSGWIKSALRGGKKEMQESTD

Query:  QKLNFVLNTAPMWDRLELKGNHFVLGEFLEFKGKKEDMAALREIKRSKVSCIVIQKSRMIGFVPSKFRVLYSTRDYRNDGASASEWKEITIGSSTMVVFQ
        QKLNF+L TAP WDR+ELK +  VLGEFLEFKGK+ED  ALR IKRSKV  + IQK+ M G  PS+ +VLYS RDYR++G+S +E KE+T+ SST V+FQ
Subjt:  QKLNFVLNTAPMWDRLELKGNHFVLGEFLEFKGKKEDMAALREIKRSKVSCIVIQKSRMIGFVPSKFRVLYSTRDYRNDGASASEWKEITIGSSTMVVFQ

Query:  MEYSSKVRKIKISSIVSLSLSA
           S+K++K K+SS+VS+SLSA
Subjt:  MEYSSKVRKIKISSIVSLSLSA

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGATGGAGAAATTTCCGAAGAGGAGGAAATTCAATTTCTTCTTCTTCATTCATTCATTCATTGTTGTGATCTGTGGATGGAGCAAGTTAGGAGTGATGTGGGCTGAGAT
AGTGTGCGGTTTCATAGCGTTTAGGGTTCTCAGGCGATTCTTTTTTCAAACCGATGAATTGGAGATCGAGACCTATGATTCTAATGCCCTTTTCGCAGCCGCTTCTAGAT
TAGAACAGATTTATGGTGGAAAGATTTTTGTGGGACTTCGAATTCCGGATGCTGACACTGGCTTGCGACAGAGTATTGATATGGTGCTTGTGACCAAAGGGGAAGCAGTG
GTGATATGTGTAAAAAATCTTTCAGGTTTTGTTTCCATGAGTGCTGATGGCAGCTGGATCTGTGAAGGTGATGATAGACAAAAGTCAGAGATTCTGCCTGATCCAGTAGC
TGAGACACGAAGATGGGCATCAATTCTTGAATCATACCTTGTGCAGAGAGGAGTTGCTTTGCCCGAAGGATATTTATCGTGGAAAGTTTTACTTCCCAACCCAAAATTCC
GAACAGGGCATTCAAACTATTTTCCTTCTGAAGTTATCACATATGATCAGTGGATACAGTTGAAACCAGAACCAAAAAGCTTGTTCTCTGGTTGGATAAAGAGTGCTTTG
CGAGGCGGGAAAAAAGAGATGCAGGAATCGACAGATCAGAAGCTAAACTTTGTCCTCAATACTGCACCCATGTGGGATAGGTTGGAGTTAAAAGGAAATCACTTTGTTCT
GGGAGAATTCCTTGAGTTCAAAGGGAAAAAGGAAGATATGGCAGCTTTGAGAGAGATAAAAAGATCAAAAGTTAGTTGCATAGTCATTCAAAAGTCGAGAATGATCGGAT
TTGTTCCATCCAAGTTTCGAGTTCTATACTCTACTCGGGATTATCGAAATGACGGAGCCTCTGCTTCGGAGTGGAAGGAAATAACAATAGGATCCAGTACAATGGTAGTA
TTTCAGATGGAATATTCTTCTAAAGTTCGAAAAATCAAAATATCTTCAATTGTATCTCTATCATTGAGTGCCTGA

mRNA sequence

Show/hide mRNA sequence

CTTTTTCAAAAAAAAAAAAAACAAAAATGGGGTTTTTCTTTTTTGCAAAGTATTATGGACACGTGGCACACGTTGATTAGATATAGTAGGGTCTGAGCCAATGATGGAGA
AATTTCCGAAGAGGAGGAAATTCAATTTCTTCTTCTTCATTCATTCATTCATTGTTGTGATCTGTGGATGGAGCAAGTTAGGAGTGATGTGGGCTGAGATAGTGTGCGGT
TTCATAGCGTTTAGGGTTCTCAGGCGATTCTTTTTTCAAACCGATGAATTGGAGATCGAGACCTATGATTCTAATGCCCTTTTCGCAGCCGCTTCTAGATTAGAACAGAT
TTATGGTGGAAAGATTTTTGTGGGACTTCGAATTCCGGATGCTGACACTGGCTTGCGACAGAGTATTGATATGGTGCTTGTGACCAAAGGGGAAGCAGTGGTGATATGTG
TAAAAAATCTTTCAGGTTTTGTTTCCATGAGTGCTGATGGCAGCTGGATCTGTGAAGGTGATGATAGACAAAAGTCAGAGATTCTGCCTGATCCAGTAGCTGAGACACGA
AGATGGGCATCAATTCTTGAATCATACCTTGTGCAGAGAGGAGTTGCTTTGCCCGAAGGATATTTATCGTGGAAAGTTTTACTTCCCAACCCAAAATTCCGAACAGGGCA
TTCAAACTATTTTCCTTCTGAAGTTATCACATATGATCAGTGGATACAGTTGAAACCAGAACCAAAAAGCTTGTTCTCTGGTTGGATAAAGAGTGCTTTGCGAGGCGGGA
AAAAAGAGATGCAGGAATCGACAGATCAGAAGCTAAACTTTGTCCTCAATACTGCACCCATGTGGGATAGGTTGGAGTTAAAAGGAAATCACTTTGTTCTGGGAGAATTC
CTTGAGTTCAAAGGGAAAAAGGAAGATATGGCAGCTTTGAGAGAGATAAAAAGATCAAAAGTTAGTTGCATAGTCATTCAAAAGTCGAGAATGATCGGATTTGTTCCATC
CAAGTTTCGAGTTCTATACTCTACTCGGGATTATCGAAATGACGGAGCCTCTGCTTCGGAGTGGAAGGAAATAACAATAGGATCCAGTACAATGGTAGTATTTCAGATGG
AATATTCTTCTAAAGTTCGAAAAATCAAAATATCTTCAATTGTATCTCTATCATTGAGTGCCTGAAGATGTCTGGTCAGCTTTCTTATTTTTCTTCCGAGACTTGCTGAG
ATGAGAGAGTGTACTACACATACTTTGTGTTTGTTATTTGGTCGTTTTTTAGTTCAACTATTGGAGATGGAGAATTTGAATTCACAATCTCTTAATCATAGATACGTACT
TATGTCGGTTGAATTATTGCTCTCGTTAGCTTTGGTTGTCATTTTTTTGTGTGTTTATGTCATATATAGTCAAAACTGCAGATAGAAACTTGAGCGTGTAATGTATTTGA
AACAGTGTATATATGATTTATCTATTTTGGGAGGA

Protein sequence

Show/hide protein sequence

MMEKFPKRRKFNFFFFIHSFIVVICGWSKLGVMWAEIVCGFIAFRVLRRFFFQTDELEIETYDSNALFAAASRLEQIYGGKIFVGLRIPDADTGLRQSIDMVLVTKGEAV
VICVKNLSGFVSMSADGSWICEGDDRQKSEILPDPVAETRRWASILESYLVQRGVALPEGYLSWKVLLPNPKFRTGHSNYFPSEVITYDQWIQLKPEPKSLFSGWIKSAL
RGGKKEMQESTDQKLNFVLNTAPMWDRLELKGNHFVLGEFLEFKGKKEDMAALREIKRSKVSCIVIQKSRMIGFVPSKFRVLYSTRDYRNDGASASEWKEITIGSSTMVV
FQMEYSSKVRKIKISSIVSLSLSA

Sed0007489 (gene) of Chayote v1 genome