; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0007491 (gene) of Chayote v1 genome

Gene IDSed0007491
OrganismSechium edule (Chayote v1)
DescriptionReverse transcriptase Ty1/copia-type domain-containing protein
Genome locationLG08:30662023..30662733
RNA-Seq ExpressionSed0007491
SyntenySed0007491
Gene Ontology termsNA
InterPro domainsIPR013103 - Reverse transcriptase, RNA-dependent DNA polymerase
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TQD93593.1 hypothetical protein C1H46_020801 [Malus baccata]1.7e-6457.69Show/hide
Query:  SLFVRRAQQSITYLLLYVDDIVLTGNDTLFVTMLIDKLQDSFDMTALGSLTYFIGLEIKQLSSCIFVSQTKYATDVLQRFGLSNAKPCCTPMMAKSQNTS
        SLFV+   QSI  LLLYVDDI+LTGN    V  +I +L   FDM  LG L YF+GL+I+  SS +FV Q+KY TD+L +  +   KPC TP     +  +
Subjt:  SLFVRRAQQSITYLLLYVDDIVLTGNDTLFVTMLIDKLQDSFDMTALGSLTYFIGLEIKQLSSCIFVSQTKYATDVLQRFGLSNAKPCCTPMMAKSQNTS

Query:  STLCSSDDSTTYRQMVGALHYLTFTRPDIAYAVGKTSQYMNRPTIEQLAAVKRIFRYIKGTLHSSIHFQQGPLNIQAFSDSDWAGDSNDRRSITGFVVFL
            S  D   YR +VGAL YLTFTRPDIAY+V +  Q+M+ P  +   AVKRI RY++GT+H  IHF  G L+I+A++D+DWAGD NDRRS TGFVVFL
Subjt:  STLCSSDDSTTYRQMVGALHYLTFTRPDIAYAVGKTSQYMNRPTIEQLAAVKRIFRYIKGTLHSSIHFQQGPLNIQAFSDSDWAGDSNDRRSITGFVVFL

Query:  GSNPISWISKKQVTVSRSSTEAEYRALAATTAEV
        GSNPISW SKKQ TVSRSSTEAEYRA+A TTAE+
Subjt:  GSNPISWISKKQVTVSRSSTEAEYRALAATTAEV

XP_020415542.1 uncharacterized protein LOC109948051 [Prunus persica]2.1e-6254.27Show/hide
Query:  SLFVRRAQQSITYLLLYVDDIVLTGNDTLFVTMLIDKLQDSFDMTALGSLTYFIGLEIKQLSSCIFVSQTKYATDVLQRFGLSNAKPCCTPMMAKSQNTS
        SLF+R +   +  LLLYVDDI+LTGN+++ +   I  L   FDM  LG LTYF+GL+++  S+ I V+Q+KYA D+L + G++  KPC TP +  ++   
Subjt:  SLFVRRAQQSITYLLLYVDDIVLTGNDTLFVTMLIDKLQDSFDMTALGSLTYFIGLEIKQLSSCIFVSQTKYATDVLQRFGLSNAKPCCTPMMAKSQNTS

Query:  STLCSSDDSTTYRQMVGALHYLTFTRPDIAYAVGKTSQYMNRPTIEQLAAVKRIFRYIKGTLHSSIHFQQGPLNIQAFSDSDWAGDSNDRRSITGFVVFL
               D T YR +VG L YLTF+RPDIA+AV    Q+M+ PT    AAVKR+ RY+ GTL   IHF  G +++QA+SD+DWAGD NDRRS TG VVFL
Subjt:  STLCSSDDSTTYRQMVGALHYLTFTRPDIAYAVGKTSQYMNRPTIEQLAAVKRIFRYIKGTLHSSIHFQQGPLNIQAFSDSDWAGDSNDRRSITGFVVFL

Query:  GSNPISWISKKQVTVSRSSTEAEYRALAATTAEV
        G+NPISW +KKQ TVSRSSTEAEYRALA T+AE+
Subjt:  GSNPISWISKKQVTVSRSSTEAEYRALAATTAEV

XP_022143489.1 uncharacterized protein LOC111013365 [Momordica charantia]1.6e-6759.49Show/hide
Query:  SLFVRRAQQSITYLLLYVDDIVLTGNDTLFVTMLIDKLQDSFDMTALGSLTYFIGLEIKQLSSCIFVSQTKYATDVLQRFGLSNAKPCCTPMMAKSQNTS
        SLFVR    S TYLLLYVDDI++TG+D  ++  LI +L+  FDMT L  L YF+GLEI   ++ + +SQ KY  DVLQRFG+ +AKPC TPM   S    
Subjt:  SLFVRRAQQSITYLLLYVDDIVLTGNDTLFVTMLIDKLQDSFDMTALGSLTYFIGLEIKQLSSCIFVSQTKYATDVLQRFGLSNAKPCCTPMMAKSQNTS

Query:  STLCSSDDSTTYRQMVGALHYLTFTRPDIAYAVGKTSQYMNRPTIEQLAAVKRIFRYIKGTLHSSIHFQQGPLNIQ--AFSDSDWAGDSNDRRSITGFVV
           CS +D   YR ++G+LHYLTFTRPDIA+AVGK SQ+M+ P    L A KRI RY+ G+L  SI FQ+   N++  AFSDSDWAGDS+DRRS +GFV+
Subjt:  STLCSSDDSTTYRQMVGALHYLTFTRPDIAYAVGKTSQYMNRPTIEQLAAVKRIFRYIKGTLHSSIHFQQGPLNIQ--AFSDSDWAGDSNDRRSITGFVV

Query:  FLGSNPISWISKKQVTVSRSSTEAEYRALAATTAEVF
        FLGSNPIS  SKKQ TVSRSSTEAEYR LA+T AE+F
Subjt:  FLGSNPISWISKKQVTVSRSSTEAEYRALAATTAEVF

XP_022152156.1 uncharacterized protein LOC111019945 [Momordica charantia]2.1e-6756.96Show/hide
Query:  SLFVRRAQQSITYLLLYVDDIVLTGNDTLFVTMLIDKLQDSFDMTALGSLTYFIGLEIKQLSSCIFVSQTKYATDVLQRFGLSNAKPCCTPMMAKSQNTS
        SLFVR    S+TYLLLYVDDI++TGN + ++  LI  L+D FDMT LG+L YF+GLEI   S  I V+Q KY  D+L+RFG+ +AKPC TP+   + +  
Subjt:  SLFVRRAQQSITYLLLYVDDIVLTGNDTLFVTMLIDKLQDSFDMTALGSLTYFIGLEIKQLSSCIFVSQTKYATDVLQRFGLSNAKPCCTPMMAKSQNTS

Query:  STLCSSDDSTTYRQMVGALHYLTFTRPDIAYAVGKTSQYMNRPTIEQLAAVKRIFRYIKGTLHSSIHFQQGP---LNIQAFSDSDWAGDSNDRRSITGFV
           CS++D+  YR ++GA +YLTF+RPDIA++V K SQ+M++P +  L A KRI RY+ GT+   + F++ P   L + AFSDSDWAGD+ DRRS TG V
Subjt:  STLCSSDDSTTYRQMVGALHYLTFTRPDIAYAVGKTSQYMNRPTIEQLAAVKRIFRYIKGTLHSSIHFQQGP---LNIQAFSDSDWAGDSNDRRSITGFV

Query:  VFLGSNPISWISKKQVTVSRSSTEAEYRALAATTAEV
        +FLGSNPISW +KKQ TVSRSSTEAEYRALA+TTAE+
Subjt:  VFLGSNPISWISKKQVTVSRSSTEAEYRALAATTAEV

XP_030964983.1 uncharacterized protein LOC115986279, partial [Quercus lobata]9.2e-6353.85Show/hide
Query:  SLFVRRAQQSITYLLLYVDDIVLTGNDTLFVTMLIDKLQDSFDMTALGSLTYFIGLEIKQLSSCIFVSQTKYATDVLQRFGLSNAKPCCTPMMAKSQNTS
        SLFV  +  ++ YLLLYVDDI++TGN +  +  LI  L  +FD+  LG L YF+G++I      + +SQTKYA+++L RF + N+KP  TP  + ++ T 
Subjt:  SLFVRRAQQSITYLLLYVDDIVLTGNDTLFVTMLIDKLQDSFDMTALGSLTYFIGLEIKQLSSCIFVSQTKYATDVLQRFGLSNAKPCCTPMMAKSQNTS

Query:  STLCSSDDSTTYRQMVGALHYLTFTRPDIAYAVGKTSQYMNRPTIEQLAAVKRIFRYIKGTLHSSIHFQQGPLNIQAFSDSDWAGDSNDRRSITGFVVFL
         +     D +TYR MVGAL YLTFTRPD+A++V +  Q+M  PT   L A KR+ RY++GTL   I+F +GPL + AF+D+DWAGD  DR+S TGF+VFL
Subjt:  STLCSSDDSTTYRQMVGALHYLTFTRPDIAYAVGKTSQYMNRPTIEQLAAVKRIFRYIKGTLHSSIHFQQGPLNIQAFSDSDWAGDSNDRRSITGFVVFL

Query:  GSNPISWISKKQVTVSRSSTEAEYRALAATTAEV
        GSNPISW SKKQ TVSRSSTEAEYRALA T AE+
Subjt:  GSNPISWISKKQVTVSRSSTEAEYRALAATTAEV

TrEMBL top hitse value%identityAlignment
A0A2N9G229 Reverse transcriptase Ty1/copia-type domain-containing protein6.9e-6455.32Show/hide
Query:  SLFVRRAQQSITYLLLYVDDIVLTGNDTLFVTMLIDKLQDSFDMTALGSLTYFIGLEIKQLSSCIFVSQTKYATDVLQRFGLSNAKPCCTPMMAKSQNTS
        SLF  +A     YLLLYVDDI++TG     +T LI KLQ +F++  LG L YF+GL++   ++   V QTKYA+D+LQRF ++N KP  TP  + S+ T 
Subjt:  SLFVRRAQQSITYLLLYVDDIVLTGNDTLFVTMLIDKLQDSFDMTALGSLTYFIGLEIKQLSSCIFVSQTKYATDVLQRFGLSNAKPCCTPMMAKSQNTS

Query:  STLCSSDDSTTYRQMVGALHYLTFTRPDIAYAVGKTSQYMNRPTIEQLAAVKRIFRYIKGTLHSSIHFQQGPLNIQAFSDSDWAGDSNDRRSITGFVVFL
               D T++R +VGAL YLTFTRPD+++AV +  Q+M+ PT   L A KRI RYIKG+L S + FQ G LN+QA++D+DWAGD  DRRS +G+VVFL
Subjt:  STLCSSDDSTTYRQMVGALHYLTFTRPDIAYAVGKTSQYMNRPTIEQLAAVKRIFRYIKGTLHSSIHFQQGPLNIQAFSDSDWAGDSNDRRSITGFVVFL

Query:  GSNPISWISKKQVTVSRSSTEAEYRALAATTAEVF
        GS PI+W+SKKQ TVSRSSTEAEYR+LA+ TAEVF
Subjt:  GSNPISWISKKQVTVSRSSTEAEYRALAATTAEVF

A0A2N9GN02 Reverse transcriptase Ty1/copia-type domain-containing protein6.9e-6455.32Show/hide
Query:  SLFVRRAQQSITYLLLYVDDIVLTGNDTLFVTMLIDKLQDSFDMTALGSLTYFIGLEIKQLSSCIFVSQTKYATDVLQRFGLSNAKPCCTPMMAKSQNTS
        SLF  +A     YLLLYVDDI++TG     +T LI KLQ +F++  LG L YF+GL++   ++   V QTKYA+D+LQRF ++N KP  TP  + S+ T 
Subjt:  SLFVRRAQQSITYLLLYVDDIVLTGNDTLFVTMLIDKLQDSFDMTALGSLTYFIGLEIKQLSSCIFVSQTKYATDVLQRFGLSNAKPCCTPMMAKSQNTS

Query:  STLCSSDDSTTYRQMVGALHYLTFTRPDIAYAVGKTSQYMNRPTIEQLAAVKRIFRYIKGTLHSSIHFQQGPLNIQAFSDSDWAGDSNDRRSITGFVVFL
               D T++R +VGAL YLTFTRPD+++AV +  Q+M+ PT   L A KRI RYIKG+L S + FQ G LN+QA++D+DWAGD  DRRS +G+VVFL
Subjt:  STLCSSDDSTTYRQMVGALHYLTFTRPDIAYAVGKTSQYMNRPTIEQLAAVKRIFRYIKGTLHSSIHFQQGPLNIQAFSDSDWAGDSNDRRSITGFVVFL

Query:  GSNPISWISKKQVTVSRSSTEAEYRALAATTAEVF
        GS PI+W+SKKQ TVSRSSTEAEYR+LA+ TAEVF
Subjt:  GSNPISWISKKQVTVSRSSTEAEYRALAATTAEVF

A0A540M4B6 Integrase catalytic domain-containing protein8.1e-6557.69Show/hide
Query:  SLFVRRAQQSITYLLLYVDDIVLTGNDTLFVTMLIDKLQDSFDMTALGSLTYFIGLEIKQLSSCIFVSQTKYATDVLQRFGLSNAKPCCTPMMAKSQNTS
        SLFV+   QSI  LLLYVDDI+LTGN    V  +I +L   FDM  LG L YF+GL+I+  SS +FV Q+KY TD+L +  +   KPC TP     +  +
Subjt:  SLFVRRAQQSITYLLLYVDDIVLTGNDTLFVTMLIDKLQDSFDMTALGSLTYFIGLEIKQLSSCIFVSQTKYATDVLQRFGLSNAKPCCTPMMAKSQNTS

Query:  STLCSSDDSTTYRQMVGALHYLTFTRPDIAYAVGKTSQYMNRPTIEQLAAVKRIFRYIKGTLHSSIHFQQGPLNIQAFSDSDWAGDSNDRRSITGFVVFL
            S  D   YR +VGAL YLTFTRPDIAY+V +  Q+M+ P  +   AVKRI RY++GT+H  IHF  G L+I+A++D+DWAGD NDRRS TGFVVFL
Subjt:  STLCSSDDSTTYRQMVGALHYLTFTRPDIAYAVGKTSQYMNRPTIEQLAAVKRIFRYIKGTLHSSIHFQQGPLNIQAFSDSDWAGDSNDRRSITGFVVFL

Query:  GSNPISWISKKQVTVSRSSTEAEYRALAATTAEV
        GSNPISW SKKQ TVSRSSTEAEYRA+A TTAE+
Subjt:  GSNPISWISKKQVTVSRSSTEAEYRALAATTAEV

A0A6J1CPG5 uncharacterized protein LOC1110133657.9e-6859.49Show/hide
Query:  SLFVRRAQQSITYLLLYVDDIVLTGNDTLFVTMLIDKLQDSFDMTALGSLTYFIGLEIKQLSSCIFVSQTKYATDVLQRFGLSNAKPCCTPMMAKSQNTS
        SLFVR    S TYLLLYVDDI++TG+D  ++  LI +L+  FDMT L  L YF+GLEI   ++ + +SQ KY  DVLQRFG+ +AKPC TPM   S    
Subjt:  SLFVRRAQQSITYLLLYVDDIVLTGNDTLFVTMLIDKLQDSFDMTALGSLTYFIGLEIKQLSSCIFVSQTKYATDVLQRFGLSNAKPCCTPMMAKSQNTS

Query:  STLCSSDDSTTYRQMVGALHYLTFTRPDIAYAVGKTSQYMNRPTIEQLAAVKRIFRYIKGTLHSSIHFQQGPLNIQ--AFSDSDWAGDSNDRRSITGFVV
           CS +D   YR ++G+LHYLTFTRPDIA+AVGK SQ+M+ P    L A KRI RY+ G+L  SI FQ+   N++  AFSDSDWAGDS+DRRS +GFV+
Subjt:  STLCSSDDSTTYRQMVGALHYLTFTRPDIAYAVGKTSQYMNRPTIEQLAAVKRIFRYIKGTLHSSIHFQQGPLNIQ--AFSDSDWAGDSNDRRSITGFVV

Query:  FLGSNPISWISKKQVTVSRSSTEAEYRALAATTAEVF
        FLGSNPIS  SKKQ TVSRSSTEAEYR LA+T AE+F
Subjt:  FLGSNPISWISKKQVTVSRSSTEAEYRALAATTAEVF

A0A6J1DGS4 uncharacterized protein LOC1110199451.0e-6756.96Show/hide
Query:  SLFVRRAQQSITYLLLYVDDIVLTGNDTLFVTMLIDKLQDSFDMTALGSLTYFIGLEIKQLSSCIFVSQTKYATDVLQRFGLSNAKPCCTPMMAKSQNTS
        SLFVR    S+TYLLLYVDDI++TGN + ++  LI  L+D FDMT LG+L YF+GLEI   S  I V+Q KY  D+L+RFG+ +AKPC TP+   + +  
Subjt:  SLFVRRAQQSITYLLLYVDDIVLTGNDTLFVTMLIDKLQDSFDMTALGSLTYFIGLEIKQLSSCIFVSQTKYATDVLQRFGLSNAKPCCTPMMAKSQNTS

Query:  STLCSSDDSTTYRQMVGALHYLTFTRPDIAYAVGKTSQYMNRPTIEQLAAVKRIFRYIKGTLHSSIHFQQGP---LNIQAFSDSDWAGDSNDRRSITGFV
           CS++D+  YR ++GA +YLTF+RPDIA++V K SQ+M++P +  L A KRI RY+ GT+   + F++ P   L + AFSDSDWAGD+ DRRS TG V
Subjt:  STLCSSDDSTTYRQMVGALHYLTFTRPDIAYAVGKTSQYMNRPTIEQLAAVKRIFRYIKGTLHSSIHFQQGP---LNIQAFSDSDWAGDSNDRRSITGFV

Query:  VFLGSNPISWISKKQVTVSRSSTEAEYRALAATTAEV
        +FLGSNPISW +KKQ TVSRSSTEAEYRALA+TTAE+
Subjt:  VFLGSNPISWISKKQVTVSRSSTEAEYRALAATTAEV

SwissProt top hitse value%identityAlignment
P04146 Copia protein1.5e-2835.4Show/hide
Query:  YLLLYVDDIVLTGNDTLFVTMLIDKLQDSFDMTALGSLTYFIGLEIKQLSSCIFVSQTKYATDVLQRFGLSNAKPCCTPMMAKSQNTSSTLCSSDDSTTY
        Y+LLYVDD+V+   D   +      L + F MT L  + +FIG+ I+     I++SQ+ Y   +L +F + N     TP+ +K  N        D +T  
Subjt:  YLLLYVDDIVLTGNDTLFVTMLIDKLQDSFDMTALGSLTYFIGLEIKQLSSCIFVSQTKYATDVLQRFGLSNAKPCCTPMMAKSQNTSSTLCSSDDSTTY

Query:  RQMVGALHYLTF-TRPDIAYAVGKTSQYMNRPTIEQLAAVKRIFRYIKGTLHSSIHFQQG---PLNIQAFSDSDWAGDSNDRRSITGFVV-FLGSNPISW
        R ++G L Y+   TRPD+  AV   S+Y ++   E    +KR+ RY+KGT+   + F++       I  + DSDWAG   DR+S TG++      N I W
Subjt:  RQMVGALHYLTF-TRPDIAYAVGKTSQYMNRPTIEQLAAVKRIFRYIKGTLHSSIHFQQG---PLNIQAFSDSDWAGDSNDRRSITGFVV-FLGSNPISW

Query:  ISKKQVTVSRSSTEAEYRALAATTAE
         +K+Q +V+ SSTEAEY AL     E
Subjt:  ISKKQVTVSRSSTEAEYRALAATTAE

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-948.8e-3237.19Show/hide
Query:  FVRRAQQSITYLLLYVDDIVLTGNDTLFVTMLIDKLQDSFDMTALGSLTYFIGLEI--KQLSSCIFVSQTKYATDVLQRFGLSNAKPCCTPMMAKSQNTS
        F R ++ +   LLLYVDD+++ G D   +  L   L  SFDM  LG     +G++I  ++ S  +++SQ KY   VL+RF + NAKP  TP +A     S
Subjt:  FVRRAQQSITYLLLYVDDIVLTGNDTLFVTMLIDKLQDSFDMTALGSLTYFIGLEI--KQLSSCIFVSQTKYATDVLQRFGLSNAKPCCTPMMAKSQNTS

Query:  STLCSSD-------DSTTYRQMVGALHY-LTFTRPDIAYAVGKTSQYMNRPTIEQLAAVKRIFRYIKGTLHSSIHFQQGPLNIQAFSDSDWAGDSNDRRS
          +C +            Y   VG+L Y +  TRPDIA+AVG  S+++  P  E   AVK I RY++GT    + F      ++ ++D+D AGD ++R+S
Subjt:  STLCSSD-------DSTTYRQMVGALHY-LTFTRPDIAYAVGKTSQYMNRPTIEQLAAVKRIFRYIKGTLHSSIHFQQGPLNIQAFSDSDWAGDSNDRRS

Query:  ITGFVVFLGSNPISWISKKQVTVSRSSTEAEYRALAATTAEV
         TG++       ISW SK Q  V+ S+TEAEY A   T  E+
Subjt:  ITGFVVFLGSNPISWISKKQVTVSRSSTEAEYRALAATTAEV

P92519 Uncharacterized mitochondrial protein AtMg008101.1e-5350.67Show/hide
Query:  YLLLYVDDIVLTGNDTLFVTMLIDKLQDSFDMTALGSLTYFIGLEIKQLSSCIFVSQTKYATDVLQRFGLSNAKPCCTPMMAKSQNTSSTLCSSDDSTTY
        YLLLYVDDI+LTG+    + MLI +L  +F M  LG + YF+G++IK   S +F+SQTKYA  +L   G+ + KP  TP+  K  N+S +     D + +
Subjt:  YLLLYVDDIVLTGNDTLFVTMLIDKLQDSFDMTALGSLTYFIGLEIKQLSSCIFVSQTKYATDVLQRFGLSNAKPCCTPMMAKSQNTSSTLCSSDDSTTY

Query:  RQMVGALHYLTFTRPDIAYAVGKTSQYMNRPTIEQLAAVKRIFRYIKGTLHSSIHF-QQGPLNIQAFSDSDWAGDSNDRRSITGFVVFLGSNPISWISKK
        R +VGAL YLT TRPDI+YAV    Q M+ PT+     +KR+ RY+KGT+   ++  +   LN+QAF DSDWAG ++ RRS TGF  FLG N ISW +K+
Subjt:  RQMVGALHYLTFTRPDIAYAVGKTSQYMNRPTIEQLAAVKRIFRYIKGTLHSSIHF-QQGPLNIQAFSDSDWAGDSNDRRSITGFVVFLGSNPISWISKK

Query:  QVTVSRSSTEAEYRALAATTAEV
        Q TVSRSSTE EYRALA T AE+
Subjt:  QVTVSRSSTEAEYRALAATTAEV

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE11.3e-5146.38Show/hide
Query:  SLFVRRAQQSITYLLLYVDDIVLTGNDTLFVTMLIDKLQDSFDMTALGSLTYFIGLEIKQLSSCIFVSQTKYATDVLQRFGLSNAKPCCTPMMAKSQNTS
        SLFV +  +SI Y+L+YVDDI++TGND   +   +D L   F +     L YF+G+E K++ + + +SQ +Y  D+L R  +  AKP  TPM    + + 
Subjt:  SLFVRRAQQSITYLLLYVDDIVLTGNDTLFVTMLIDKLQDSFDMTALGSLTYFIGLEIKQLSSCIFVSQTKYATDVLQRFGLSNAKPCCTPMMAKSQNTS

Query:  STLCSSDDSTTYRQMVGALHYLTFTRPDIAYAVGKTSQYMNRPTIEQLAAVKRIFRYIKGTLHSSIHFQQG-PLNIQAFSDSDWAGDSNDRRSITGFVVF
         +     D T YR +VG+L YL FTRPDI+YAV + SQ+M+ PT E L A+KRI RY+ GT +  I  ++G  L++ A+SD+DWAGD +D  S  G++V+
Subjt:  STLCSSDDSTTYRQMVGALHYLTFTRPDIAYAVGKTSQYMNRPTIEQLAAVKRIFRYIKGTLHSSIHFQQG-PLNIQAFSDSDWAGDSNDRRSITGFVVF

Query:  LGSNPISWISKKQVTVSRSSTEAEYRALAATTAEV
        LG +PISW SKKQ  V RSSTEAEYR++A T++E+
Subjt:  LGSNPISWISKKQVTVSRSSTEAEYRALAATTAEV

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE23.4e-5245.96Show/hide
Query:  SLFVRRAQQSITYLLLYVDDIVLTGNDTLFVTMLIDKLQDSFDMTALGSLTYFIGLEIKQLSSCIFVSQTKYATDVLQRFGLSNAKPCCTPMMAKSQNTS
        SLFV +  +SI Y+L+YVDDI++TGNDT+ +   +D L   F +     L YF+G+E K++   + +SQ +Y  D+L R  +  AKP  TPM    + T 
Subjt:  SLFVRRAQQSITYLLLYVDDIVLTGNDTLFVTMLIDKLQDSFDMTALGSLTYFIGLEIKQLSSCIFVSQTKYATDVLQRFGLSNAKPCCTPMMAKSQNTS

Query:  STLCSSDDSTTYRQMVGALHYLTFTRPDIAYAVGKTSQYMNRPTIEQLAAVKRIFRYIKGTLHSSIHFQQG-PLNIQAFSDSDWAGDSNDRRSITGFVVF
         +     D T YR +VG+L YL FTRPD++YAV + SQYM+ PT +   A+KR+ RY+ GT    I  ++G  L++ A+SD+DWAGD++D  S  G++V+
Subjt:  STLCSSDDSTTYRQMVGALHYLTFTRPDIAYAVGKTSQYMNRPTIEQLAAVKRIFRYIKGTLHSSIHFQQG-PLNIQAFSDSDWAGDSNDRRSITGFVVF

Query:  LGSNPISWISKKQVTVSRSSTEAEYRALAATTAEV
        LG +PISW SKKQ  V RSSTEAEYR++A T++E+
Subjt:  LGSNPISWISKKQVTVSRSSTEAEYRALAATTAEV

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 81.7e-3840.54Show/hide
Query:  LLLYVDDIVLTGNDTLFVTMLIDKLQDSFDMTALGSLTYFIGLEIKQLSSCIFVSQTKYATDVLQRFGLSNAKPCCTPMMAKSQNTSSTLCSSDDSTTYR
        +L+YVDDI++  N+   V  L  +L+  F +  LG L YF+GLEI + ++ I + Q KYA D+L   GL   KP   PM      ++ +     D+  YR
Subjt:  LLLYVDDIVLTGNDTLFVTMLIDKLQDSFDMTALGSLTYFIGLEIKQLSSCIFVSQTKYATDVLQRFGLSNAKPCCTPMMAKSQNTSSTLCSSDDSTTYR

Query:  QMVGALHYLTFTRPDIAYAVGKTSQYMNRPTIEQLAAVKRIFRYIKGTLHSSIHF-QQGPLNIQAFSDSDWAGDSNDRRSITGFVVFLGSNPISWISKKQ
        +++G L YL  TR DI++AV K SQ+   P +    AV +I  YIKGT+   + +  Q  + +Q FSD+ +    + RRS  G+ +FLG++ ISW SKKQ
Subjt:  QMVGALHYLTFTRPDIAYAVGKTSQYMNRPTIEQLAAVKRIFRYIKGTLHSSIHF-QQGPLNIQAFSDSDWAGDSNDRRSITGFVVFLGSNPISWISKKQ

Query:  VTVSRSSTEAEYRALAATTAEV
          VS+SS EAEYRAL+  T E+
Subjt:  VTVSRSSTEAEYRALAATTAEV

ATMG00240.1 Gag-Pol-related retrotransposon family protein9.3e-1341.56Show/hide
Query:  YLTFTRPDIAYAVGKTSQYMNRPTIEQLAAVKRIFRYIKGTLHSSIHFQ-QGPLNIQAFSDSDWAGDSNDRRSITGF
        YLT TRPD+ +AV + SQ+ +     Q+ AV ++  Y+KGT+   + +     L ++AF+DSDWA   + RRS+TGF
Subjt:  YLTFTRPDIAYAVGKTSQYMNRPTIEQLAAVKRIFRYIKGTLHSSIHFQ-QGPLNIQAFSDSDWAGDSNDRRSITGF

ATMG00810.1 DNA/RNA polymerases superfamily protein7.5e-5550.67Show/hide
Query:  YLLLYVDDIVLTGNDTLFVTMLIDKLQDSFDMTALGSLTYFIGLEIKQLSSCIFVSQTKYATDVLQRFGLSNAKPCCTPMMAKSQNTSSTLCSSDDSTTY
        YLLLYVDDI+LTG+    + MLI +L  +F M  LG + YF+G++IK   S +F+SQTKYA  +L   G+ + KP  TP+  K  N+S +     D + +
Subjt:  YLLLYVDDIVLTGNDTLFVTMLIDKLQDSFDMTALGSLTYFIGLEIKQLSSCIFVSQTKYATDVLQRFGLSNAKPCCTPMMAKSQNTSSTLCSSDDSTTY

Query:  RQMVGALHYLTFTRPDIAYAVGKTSQYMNRPTIEQLAAVKRIFRYIKGTLHSSIHF-QQGPLNIQAFSDSDWAGDSNDRRSITGFVVFLGSNPISWISKK
        R +VGAL YLT TRPDI+YAV    Q M+ PT+     +KR+ RY+KGT+   ++  +   LN+QAF DSDWAG ++ RRS TGF  FLG N ISW +K+
Subjt:  RQMVGALHYLTFTRPDIAYAVGKTSQYMNRPTIEQLAAVKRIFRYIKGTLHSSIHF-QQGPLNIQAFSDSDWAGDSNDRRSITGFVVFLGSNPISWISKK

Query:  QVTVSRSSTEAEYRALAATTAEV
        Q TVSRSSTE EYRALA T AE+
Subjt:  QVTVSRSSTEAEYRALAATTAEV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCTTATTTGTTCGAAGAGCTCAACAATCAATTACCTACCTTCTTCTATACGTGGATGATATCGTCCTCACTGGCAATGATACCTTGTTTGTCACTATGTTGATTGA
CAAACTTCAAGATTCATTTGATATGACTGCCTTGGGCTCCCTCACTTACTTCATTGGGTTGGAAATTAAGCAGTTGTCCTCATGCATTTTTGTAAGTCAAACTAAGTATG
CAACAGATGTATTACAACGTTTTGGTTTGTCTAATGCAAAGCCTTGTTGCACACCTATGATGGCCAAGTCACAAAATACATCTTCTACCTTATGCTCATCAGATGACTCC
ACGACTTATCGACAAATGGTTGGGGCCCTTCATTACTTAACTTTTACCCGACCAGACATAGCCTATGCTGTTGGAAAAACGTCCCAATATATGAATAGACCGACCATTGA
ACAACTTGCAGCTGTCAAAAGAATTTTTCGTTATATTAAAGGCACCTTGCATTCATCTATACACTTTCAGCAAGGACCTCTTAACATTCAGGCCTTCTCTGATTCTGATT
GGGCAGGTGATTCCAACGATCGTCGATCCATAACAGGATTCGTTGTTTTTCTGGGCAGCAATCCGATTTCATGGATATCCAAAAAGCAAGTCACGGTATCGCGAAGCTCC
ACGGAGGCTGAGTATAGGGCTCTTGCTGCCACTACTGCAGAAGTTTTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCCTTATTTGTTCGAAGAGCTCAACAATCAATTACCTACCTTCTTCTATACGTGGATGATATCGTCCTCACTGGCAATGATACCTTGTTTGTCACTATGTTGATTGA
CAAACTTCAAGATTCATTTGATATGACTGCCTTGGGCTCCCTCACTTACTTCATTGGGTTGGAAATTAAGCAGTTGTCCTCATGCATTTTTGTAAGTCAAACTAAGTATG
CAACAGATGTATTACAACGTTTTGGTTTGTCTAATGCAAAGCCTTGTTGCACACCTATGATGGCCAAGTCACAAAATACATCTTCTACCTTATGCTCATCAGATGACTCC
ACGACTTATCGACAAATGGTTGGGGCCCTTCATTACTTAACTTTTACCCGACCAGACATAGCCTATGCTGTTGGAAAAACGTCCCAATATATGAATAGACCGACCATTGA
ACAACTTGCAGCTGTCAAAAGAATTTTTCGTTATATTAAAGGCACCTTGCATTCATCTATACACTTTCAGCAAGGACCTCTTAACATTCAGGCCTTCTCTGATTCTGATT
GGGCAGGTGATTCCAACGATCGTCGATCCATAACAGGATTCGTTGTTTTTCTGGGCAGCAATCCGATTTCATGGATATCCAAAAAGCAAGTCACGGTATCGCGAAGCTCC
ACGGAGGCTGAGTATAGGGCTCTTGCTGCCACTACTGCAGAAGTTTTTTAG
Protein sequenceShow/hide protein sequence
MSLFVRRAQQSITYLLLYVDDIVLTGNDTLFVTMLIDKLQDSFDMTALGSLTYFIGLEIKQLSSCIFVSQTKYATDVLQRFGLSNAKPCCTPMMAKSQNTSSTLCSSDDS
TTYRQMVGALHYLTFTRPDIAYAVGKTSQYMNRPTIEQLAAVKRIFRYIKGTLHSSIHFQQGPLNIQAFSDSDWAGDSNDRRSITGFVVFLGSNPISWISKKQVTVSRSS
TEAEYRALAATTAEVF