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Sed0007502 (gene) of Chayote v1 genome

Gene IDSed0007502
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG13:5735965..5736783
RNA-Seq ExpressionSed0007502
SyntenySed0007502
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600516.1 hypothetical protein SDJN03_05749, partial [Cucurbita argyrosperma subsp. sororia]2.5e-3266.42Show/hide
Query:  MMSTIISRLNKKLQAVEISNRCRRSKK--YTPSYIYRDD--------RSTQLPETKKAKKRVRFAETEPAIIAVVGEEETQKTG-VRITVKLTKQEADRM
        M+S +IS LNKKLQAVEISNRCRR+KK   T +Y+YRDD         S Q PE KK KKRVRFAETEP IIA+  EEET+K   VRITVK+TKQEA+RM
Subjt:  MMSTIISRLNKKLQAVEISNRCRRSKK--YTPSYIYRDD--------RSTQLPETKKAKKRVRFAETEPAIIAVVGEEETQKTG-VRITVKLTKQEADRM

Query:  LSRCSNG---DFGDVACELMRIPNARVRSSVLAS
        LSRCS G   + GD ACELMRIP ARVRSS++A+
Subjt:  LSRCSNG---DFGDVACELMRIPNARVRSSVLAS

XP_008451951.1 PREDICTED: uncharacterized protein LOC103493098 [Cucumis melo]1.9e-2759.15Show/hide
Query:  MMSTIISRLNKKLQAVEISNRCRRSKKYTPSYIYRDDRST--------------QLPETKKAKKRVRFAETEPAIIAV-----VGEEETQKTGVRITVKL
        M+S +IS LNKKLQAVEISNRC+R+KK T  Y+YRDD +               Q  E KK KKRVRFA+TEP IIA+       EEET+K  VRITVKL
Subjt:  MMSTIISRLNKKLQAVEISNRCRRSKKYTPSYIYRDDRST--------------QLPETKKAKKRVRFAETEPAIIAV-----VGEEETQKTGVRITVKL

Query:  TKQEADRMLSRCSNG---DFGDVACELMRIPNARVRSSVLAS
        TKQEA+RMLSRCSN    +FGDVA EL+RIP  RV SS++A+
Subjt:  TKQEADRMLSRCSNG---DFGDVACELMRIPNARVRSSVLAS

XP_023522331.1 uncharacterized protein LOC111786247 [Cucurbita pepo subsp. pepo]1.1e-2762.69Show/hide
Query:  MMSTIISRLNKKLQAVEISNRCRRSKKYTPSYIYRDDRSTQ---------LPETKKAKKRVRFAETEPAIIAV-----VGEEETQKTGVRITVKLTKQEA
        M+  +IS LNKKLQAVEISNRCRR+KK T   +YR D S +          PE +K KKRVRFA+TEP IIA+       EEET+K  VRITVKLTKQEA
Subjt:  MMSTIISRLNKKLQAVEISNRCRRSKKYTPSYIYRDDRSTQ---------LPETKKAKKRVRFAETEPAIIAV-----VGEEETQKTGVRITVKLTKQEA

Query:  DRMLSRCSNG---DFGDVACELMRIPNARVRSSV
        +RMLSRCSNG   +FGDVA ELMRIP ARV SS+
Subjt:  DRMLSRCSNG---DFGDVACELMRIPNARVRSSV

XP_023552096.1 uncharacterized protein LOC111809864 [Cucurbita pepo subsp. pepo]2.4e-2761.94Show/hide
Query:  MMSTIISRLNKKLQAVEISNRCRRSKKYTPSYIYRDDRSTQ---------LPETKKAKKRVRFAETEPAIIAV-----VGEEETQKTGVRITVKLTKQEA
        M+  +IS LNKKLQAV+ISNRCRR+KK T   +YR D S +          PE +K KKRVRFA+TEP IIA+       EEET+K  VRITVKLTKQEA
Subjt:  MMSTIISRLNKKLQAVEISNRCRRSKKYTPSYIYRDDRSTQ---------LPETKKAKKRVRFAETEPAIIAV-----VGEEETQKTGVRITVKLTKQEA

Query:  DRMLSRCSNG---DFGDVACELMRIPNARVRSSV
        +RMLSRCSNG   +FGDVA ELMRIP ARV SS+
Subjt:  DRMLSRCSNG---DFGDVACELMRIPNARVRSSV

XP_038906331.1 uncharacterized protein LOC120092170 [Benincasa hispida]8.9e-3061.43Show/hide
Query:  MMSTIISRLNKKLQAVEISNRCRRSKKYTPSYIYRDDRSTQ-----------LPETKKAKKRVRFAETEPAIIAVVG------EEETQKTGVRITVKLTK
        M+S  I  LNKKLQAVEISNRCRR+KK T  Y+YRDD S +            PE KK KKRVRFA+TEP IIA+        EEET+K  VRITVKLTK
Subjt:  MMSTIISRLNKKLQAVEISNRCRRSKKYTPSYIYRDDRSTQ-----------LPETKKAKKRVRFAETEPAIIAVVG------EEETQKTGVRITVKLTK

Query:  QEADRMLSRCSNG---DFGDVACELMRIPNARVRSSVLAS
        +EA+RMLSRCS+G   +FGDVACELMRIP  RV SS++A+
Subjt:  QEADRMLSRCSNG---DFGDVACELMRIPNARVRSSVLAS

TrEMBL top hitse value%identityAlignment
A0A0A0KYE1 Uncharacterized protein4.5e-2757.64Show/hide
Query:  MMSTIISRLNKKLQAVEISNRCRRSKKYTPSYIYRDDRST--------------QLPETKKAKKRVRFAETEPAIIAVVG-------EEETQKTGVRITV
        M+S +IS LNKKLQAVEIS+RC+R+KK   +Y+YRD+ +               Q  E KK KKRVRFA+TEP IIA+         E ET+K  VRITV
Subjt:  MMSTIISRLNKKLQAVEISNRCRRSKKYTPSYIYRDDRST--------------QLPETKKAKKRVRFAETEPAIIAVVG-------EEETQKTGVRITV

Query:  KLTKQEADRMLSRCSNG---DFGDVACELMRIPNARVRSSVLAS
        KLTKQEA+RMLSRCSNG   +FGDVA ELMRIP  RVRSS++A+
Subjt:  KLTKQEADRMLSRCSNG---DFGDVACELMRIPNARVRSSVLAS

A0A1S3BS40 uncharacterized protein LOC1034930989.0e-2859.15Show/hide
Query:  MMSTIISRLNKKLQAVEISNRCRRSKKYTPSYIYRDDRST--------------QLPETKKAKKRVRFAETEPAIIAV-----VGEEETQKTGVRITVKL
        M+S +IS LNKKLQAVEISNRC+R+KK T  Y+YRDD +               Q  E KK KKRVRFA+TEP IIA+       EEET+K  VRITVKL
Subjt:  MMSTIISRLNKKLQAVEISNRCRRSKKYTPSYIYRDDRST--------------QLPETKKAKKRVRFAETEPAIIAV-----VGEEETQKTGVRITVKL

Query:  TKQEADRMLSRCSNG---DFGDVACELMRIPNARVRSSVLAS
        TKQEA+RMLSRCSN    +FGDVA EL+RIP  RV SS++A+
Subjt:  TKQEADRMLSRCSNG---DFGDVACELMRIPNARVRSSVLAS

A0A5D3D246 Uncharacterized protein9.0e-2859.15Show/hide
Query:  MMSTIISRLNKKLQAVEISNRCRRSKKYTPSYIYRDDRST--------------QLPETKKAKKRVRFAETEPAIIAV-----VGEEETQKTGVRITVKL
        M+S +IS LNKKLQAVEISNRC+R+KK T  Y+YRDD +               Q  E KK KKRVRFA+TEP IIA+       EEET+K  VRITVKL
Subjt:  MMSTIISRLNKKLQAVEISNRCRRSKKYTPSYIYRDDRST--------------QLPETKKAKKRVRFAETEPAIIAV-----VGEEETQKTGVRITVKL

Query:  TKQEADRMLSRCSNG---DFGDVACELMRIPNARVRSSVLAS
        TKQEA+RMLSRCSN    +FGDVA EL+RIP  RV SS++A+
Subjt:  TKQEADRMLSRCSNG---DFGDVACELMRIPNARVRSSVLAS

A0A6J1EU86 uncharacterized protein LOC1114376082.0e-2761.94Show/hide
Query:  MMSTIISRLNKKLQAVEISNRCRRSKKYTPSYIYRDDRSTQ---------LPETKKAKKRVRFAETEPAIIAV-----VGEEETQKTGVRITVKLTKQEA
        M+  +IS LNKKLQAVEISNRCRR+KK T   +YR D S +          PE +K KKRVRFA+TEP IIA+       EEET+K  VRITVKLTKQEA
Subjt:  MMSTIISRLNKKLQAVEISNRCRRSKKYTPSYIYRDDRSTQ---------LPETKKAKKRVRFAETEPAIIAV-----VGEEETQKTGVRITVKLTKQEA

Query:  DRMLSRCSNG---DFGDVACELMRIPNARVRSSV
        +RMLSRCS+G   +FGDVA ELMRIP ARV SS+
Subjt:  DRMLSRCSNG---DFGDVACELMRIPNARVRSSV

A0A6J1JBA8 uncharacterized protein LOC1114834364.5e-2761.03Show/hide
Query:  MMSTIISRLNKKLQAVEISNRCRRSKKYTPSYIYRDDRSTQ-----------LPETKKAKKRVRFAETEPAIIAV-----VGEEETQKTGVRITVKLTKQ
        M+  +IS LNKKLQAVEISNRCRR+KK T   +YR D S +            PE +K KKRVRFA+TEP IIA+       EEET+K  VRITVKLTKQ
Subjt:  MMSTIISRLNKKLQAVEISNRCRRSKKYTPSYIYRDDRSTQ-----------LPETKKAKKRVRFAETEPAIIAV-----VGEEETQKTGVRITVKLTKQ

Query:  EADRMLSRCSNG---DFGDVACELMRIPNARVRSSV
        EA+RMLSRCS+G   +FGDVA ELMRIP ARV SS+
Subjt:  EADRMLSRCSNG---DFGDVACELMRIPNARVRSSV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGAGCACCATAATTTCAAGGCTGAACAAAAAACTACAGGCGGTTGAAATCAGCAACCGCTGCAGACGATCGAAGAAGTACACGCCATCATACATTTACAGAGACGA
TCGGAGCACGCAGTTGCCCGAGACGAAGAAAGCGAAGAAGAGAGTGAGATTTGCCGAGACCGAGCCTGCGATAATCGCCGTTGTCGGAGAGGAGGAAACACAGAAAACGG
GGGTGAGAATTACGGTGAAGTTGACGAAGCAGGAAGCGGATCGGATGCTTTCGAGGTGCTCGAATGGCGATTTCGGAGATGTCGCTTGTGAGCTCATGCGGATTCCTAAT
GCTCGTGTTAGGTCTTCTGTACTGGCTAGTTGA
mRNA sequenceShow/hide mRNA sequence
TCTCATCTCTTATTCCTCTATATATAGAGTTCATTTGCCCCTCCTAATTATTACAATTGATCAAAACAACAAAATCTCATCTTTCTTTCATTTTCTCTCTGAATCAGATC
TGCAAATTAAATATGATGAGCACCATAATTTCAAGGCTGAACAAAAAACTACAGGCGGTTGAAATCAGCAACCGCTGCAGACGATCGAAGAAGTACACGCCATCATACAT
TTACAGAGACGATCGGAGCACGCAGTTGCCCGAGACGAAGAAAGCGAAGAAGAGAGTGAGATTTGCCGAGACCGAGCCTGCGATAATCGCCGTTGTCGGAGAGGAGGAAA
CACAGAAAACGGGGGTGAGAATTACGGTGAAGTTGACGAAGCAGGAAGCGGATCGGATGCTTTCGAGGTGCTCGAATGGCGATTTCGGAGATGTCGCTTGTGAGCTCATG
CGGATTCCTAATGCTCGTGTTAGGTCTTCTGTACTGGCTAGTTGAGCTTTTTTTTAACCCTTTCTTCTTAGAGTTGTTCTACAGCTTGATTCTGTTCATGATTTTTTTGG
GGGTTTAATTGGTGTAATAGGATATAGAGTTGTAGGTTTTTTGTCTCTTTAGATCCAGAGATTCAAATCTATTCACTATTCATATATGATTTAGAGTTTAAATTATGTAT
TATTGTATAGTATTAAGTTTTGGAGGAATGATAGGTTAATGAATTTTTTTTTTTTAGTACTTAGTGGGAGGAGAGGGACCAACAAATATCGATTTCCGGACTCGAACTCG
TGATCGTGGAGTTGAAATTGATTAATACCAAACAAGATAACTAACTGCG
Protein sequenceShow/hide protein sequence
MMSTIISRLNKKLQAVEISNRCRRSKKYTPSYIYRDDRSTQLPETKKAKKRVRFAETEPAIIAVVGEEETQKTGVRITVKLTKQEADRMLSRCSNGDFGDVACELMRIPN
ARVRSSVLAS