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Sed0007521 (gene) of Chayote v1 genome

Gene IDSed0007521
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG14:4256448..4257833
RNA-Seq ExpressionSed0007521
SyntenySed0007521
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6595252.1 hypothetical protein SDJN03_11805, partial [Cucurbita argyrosperma subsp. sororia]1.2e-1355.45Show/hide
Query:  MSSVDDERRLYECARKYQIIVKQ-----------------------NSRTNNNSSTTATQSTP------NDDEVFVQTITRFLHELRTDSTEPGSSACTQ
        MSSVDDERRLYECARKYQIIVKQ                        S  +NN STT TQ T       NDDE FVQT+TRFLHELRTD+TE  SS  T 
Subjt:  MSSVDDERRLYECARKYQIIVKQ-----------------------NSRTNNNSSTTATQSTP------NDDEVFVQTITRFLHELRTDSTEPGSSACTQ

Query:  N
        N
Subjt:  N

XP_022143962.1 uncharacterized protein LOC111013747 [Momordica charantia]7.8e-1353Show/hide
Query:  MSSVDDERRLYECARKYQIIVKQ------------------------NSRTNNNSSTTATQSTP------NDDEVFVQTITRFLHELRTDSTEPGSSACT
        MS+VDDERRLYECARKYQIIVKQ                        +S   ++SST A Q TP      NDD+ FVQTITRFLHELRTD +E  SS CT
Subjt:  MSSVDDERRLYECARKYQIIVKQ------------------------NSRTNNNSSTTATQSTP------NDDEVFVQTITRFLHELRTDSTEPGSSACT

XP_022963091.1 uncharacterized protein LOC111463394 [Cucurbita moschata]2.7e-1354.46Show/hide
Query:  MSSVDDERRLYECARKYQIIVKQ-----------------------NSRTNNNSSTTATQSTP------NDDEVFVQTITRFLHELRTDSTEPGSSACTQ
        MSSVDDERRLYECARKYQIIVKQ                        S ++NN STT TQ T       N+DE FVQT+TRFLHELRTD+TE  SS  T 
Subjt:  MSSVDDERRLYECARKYQIIVKQ-----------------------NSRTNNNSSTTATQSTP------NDDEVFVQTITRFLHELRTDSTEPGSSACTQ

Query:  N
        N
Subjt:  N

XP_022972657.1 uncharacterized protein LOC111471189 [Cucurbita maxima]1.6e-1354.46Show/hide
Query:  MSSVDDERRLYECARKYQIIVKQ-----------------------NSRTNNNSSTTATQSTP------NDDEVFVQTITRFLHELRTDSTEPGSSACTQ
        MSSVDDERRLYECARKYQIIVKQ                        S ++NN STT TQ T       NDDE FVQT+TRFLHEL+TD+TE  SS  T 
Subjt:  MSSVDDERRLYECARKYQIIVKQ-----------------------NSRTNNNSSTTATQSTP------NDDEVFVQTITRFLHELRTDSTEPGSSACTQ

Query:  N
        N
Subjt:  N

XP_023518736.1 uncharacterized protein LOC111782160 [Cucurbita pepo subsp. pepo]3.5e-1353.47Show/hide
Query:  MSSVDDERRLYECARKYQIIVKQ-----------------------NSRTNNNSSTTATQSTP------NDDEVFVQTITRFLHELRTDSTEPGSSACTQ
        MSSVDDERRLYECARKYQIIVKQ                        S ++NN STT TQ T       NDDE FVQT+TRFLHEL+TD+TE  +S  T 
Subjt:  MSSVDDERRLYECARKYQIIVKQ-----------------------NSRTNNNSSTTATQSTP------NDDEVFVQTITRFLHELRTDSTEPGSSACTQ

Query:  N
        N
Subjt:  N

TrEMBL top hitse value%identityAlignment
A0A0L9T3C0 Uncharacterized protein1.1e-0758.46Show/hide
Query:  VDDERRLYECARKYQIIVKQNSRTNNNSSTTATQSTPNDDEVFVQTITRFLHELRTDSTEPGSSA
        V DE RLYECARKY+ IVKQ SR +  S   A+ +  N +E  VQT+TRFLHELRT ST+   SA
Subjt:  VDDERRLYECARKYQIIVKQNSRTNNNSSTTATQSTPNDDEVFVQTITRFLHELRTDSTEPGSSA

A0A6J1CSB9 uncharacterized protein LOC1110137473.8e-1353Show/hide
Query:  MSSVDDERRLYECARKYQIIVKQ------------------------NSRTNNNSSTTATQSTP------NDDEVFVQTITRFLHELRTDSTEPGSSACT
        MS+VDDERRLYECARKYQIIVKQ                        +S   ++SST A Q TP      NDD+ FVQTITRFLHELRTD +E  SS CT
Subjt:  MSSVDDERRLYECARKYQIIVKQ------------------------NSRTNNNSSTTATQSTP------NDDEVFVQTITRFLHELRTDSTEPGSSACT

A0A6J1HF45 uncharacterized protein LOC1114633941.3e-1354.46Show/hide
Query:  MSSVDDERRLYECARKYQIIVKQ-----------------------NSRTNNNSSTTATQSTP------NDDEVFVQTITRFLHELRTDSTEPGSSACTQ
        MSSVDDERRLYECARKYQIIVKQ                        S ++NN STT TQ T       N+DE FVQT+TRFLHELRTD+TE  SS  T 
Subjt:  MSSVDDERRLYECARKYQIIVKQ-----------------------NSRTNNNSSTTATQSTP------NDDEVFVQTITRFLHELRTDSTEPGSSACTQ

Query:  N
        N
Subjt:  N

A0A6J1I5F9 uncharacterized protein LOC1114711897.6e-1454.46Show/hide
Query:  MSSVDDERRLYECARKYQIIVKQ-----------------------NSRTNNNSSTTATQSTP------NDDEVFVQTITRFLHELRTDSTEPGSSACTQ
        MSSVDDERRLYECARKYQIIVKQ                        S ++NN STT TQ T       NDDE FVQT+TRFLHEL+TD+TE  SS  T 
Subjt:  MSSVDDERRLYECARKYQIIVKQ-----------------------NSRTNNNSSTTATQSTP------NDDEVFVQTITRFLHELRTDSTEPGSSACTQ

Query:  N
        N
Subjt:  N

W9RX69 Uncharacterized protein3.0e-1067.8Show/hide
Query:  VDDERRLYECARKYQIIVKQNSRTNNNSSTT---ATQSTPNDDEVFVQTITRFLHELRT
        VDDERRLY+  RKY  IVKQNSRTNN S+T+   A+    +DDEVF+QTITRFLHEL+T
Subjt:  VDDERRLYECARKYQIIVKQNSRTNNNSSTT---ATQSTPNDDEVFVQTITRFLHELRT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTAGTGTTGATGATGAAAGAAGATTATATGAATGTGCAAGGAAATACCAAATAATTGTGAAACAGAACTCAAGAACAAACAATAATTCATCAACCACTGCAACTCA
ATCAACTCCAAATGATGATGAAGTATTTGTGCAAACCATCACAAGGTTCCTCCACGAACTCCGAACCGATTCGACTGAACCGGGTAGCTCGGCATGTACCCAAAACTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCTAGTGTTGATGATGAAAGAAGATTATATGAATGTGCAAGGAAATACCAAATAATTGTGAAACAGAACTCAAGAACAAACAATAATTCATCAACCACTGCAACTCA
ATCAACTCCAAATGATGATGAAGTATTTGTGCAAACCATCACAAGGTTCCTCCACGAACTCCGAACCGATTCGACTGAACCGGGTAGCTCGGCATGTACCCAAAACTAA
Protein sequenceShow/hide protein sequence
MSSVDDERRLYECARKYQIIVKQNSRTNNNSSTTATQSTPNDDEVFVQTITRFLHELRTDSTEPGSSACTQN