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Sed0007522 (gene) of Chayote v1 genome

Gene IDSed0007522
OrganismSechium edule (Chayote v1)
DescriptionCalcium-binding EF-hand
Genome locationLG05:26726998..26727863
RNA-Seq ExpressionSed0007522
SyntenySed0007522
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7018108.1 hypothetical protein SDJN02_19976, partial [Cucurbita argyrosperma subsp. argyrosperma]4.3e-6391.49Show/hide
Query:  MAVVVIDGSTVKNFVNDEAQFKKSIDEAFAALDLNCDGVLSRSELRKAFETLRLIETHFGVDEATPPEKLTQLYDSIFEQFDCDHSGTVDAEEFRSEMKN
        MAVVVIDGSTV+NFVNDE+ FKKS+DEAFAALDLN DGVLSRSELRKAFETLRLIETHFGVD  TPPEKLTQLYDSIFE+FDCD SGTVDAEEFR+EMKN
Subjt:  MAVVVIDGSTVKNFVNDEAQFKKSIDEAFAALDLNCDGVLSRSELRKAFETLRLIETHFGVDEATPPEKLTQLYDSIFEQFDCDHSGTVDAEEFRSEMKN

Query:  ILLAIADGLGSSPIQMALHDGDQSFLKQAADLEASKLSQSS
        ILLAIADGLGSSPIQMAL DGDQSFLKQAADLEASKL+QSS
Subjt:  ILLAIADGLGSSPIQMALHDGDQSFLKQAADLEASKLSQSS

XP_022934103.1 uncharacterized protein LOC111441377 [Cucurbita moschata]1.9e-6391.55Show/hide
Query:  MAVVVIDGSTVKNFVNDEAQFKKSIDEAFAALDLNCDGVLSRSELRKAFETLRLIETHFGVDEATPPEKLTQLYDSIFEQFDCDHSGTVDAEEFRSEMKN
        MAVVVIDGSTV+NFVNDE+ FKKS+DEAFAALDLN DGVLSRSELRKAFETLRLIETHFGVD  TPPEKLTQLYDSIFE+FDCD SGTVDAEEFR+EMKN
Subjt:  MAVVVIDGSTVKNFVNDEAQFKKSIDEAFAALDLNCDGVLSRSELRKAFETLRLIETHFGVDEATPPEKLTQLYDSIFEQFDCDHSGTVDAEEFRSEMKN

Query:  ILLAIADGLGSSPIQMALHDGDQSFLKQAADLEASKLSQSSA
        ILLAIADGLGSSPIQMAL DGDQSFLKQAADLEASKL+QSSA
Subjt:  ILLAIADGLGSSPIQMALHDGDQSFLKQAADLEASKLSQSSA

XP_022983603.1 uncharacterized protein LOC111482160 [Cucurbita maxima]6.6e-6492.25Show/hide
Query:  MAVVVIDGSTVKNFVNDEAQFKKSIDEAFAALDLNCDGVLSRSELRKAFETLRLIETHFGVDEATPPEKLTQLYDSIFEQFDCDHSGTVDAEEFRSEMKN
        MAVVVIDGSTV+NFVNDE+ FKKS+DEAFAALDLN DGVLSRSELRKAFETLRLIETHFGVD  TPPEKLTQLYDSIFEQFDCD SGTVDAEEFR+EMKN
Subjt:  MAVVVIDGSTVKNFVNDEAQFKKSIDEAFAALDLNCDGVLSRSELRKAFETLRLIETHFGVDEATPPEKLTQLYDSIFEQFDCDHSGTVDAEEFRSEMKN

Query:  ILLAIADGLGSSPIQMALHDGDQSFLKQAADLEASKLSQSSA
        ILLAIADGLGSSPIQMAL DGDQSFLKQAADLEASKL+QSSA
Subjt:  ILLAIADGLGSSPIQMALHDGDQSFLKQAADLEASKLSQSSA

XP_023526874.1 uncharacterized protein LOC111790245 [Cucurbita pepo subsp. pepo]1.5e-6391.55Show/hide
Query:  MAVVVIDGSTVKNFVNDEAQFKKSIDEAFAALDLNCDGVLSRSELRKAFETLRLIETHFGVDEATPPEKLTQLYDSIFEQFDCDHSGTVDAEEFRSEMKN
        MAVVVIDGSTV+NFVNDE+ FKKS+DEAFA+LDLN DGVLSRSELRKAFETLRLIETHFGVD  TPPEKLTQLYDSIFEQFDCD SGTVDAEEFR+EMKN
Subjt:  MAVVVIDGSTVKNFVNDEAQFKKSIDEAFAALDLNCDGVLSRSELRKAFETLRLIETHFGVDEATPPEKLTQLYDSIFEQFDCDHSGTVDAEEFRSEMKN

Query:  ILLAIADGLGSSPIQMALHDGDQSFLKQAADLEASKLSQSSA
        ILLAIADGLGSSPIQMAL DGDQSFLKQAADLEASKL+QSSA
Subjt:  ILLAIADGLGSSPIQMALHDGDQSFLKQAADLEASKLSQSSA

XP_038905172.1 uncharacterized protein LOC120091281 [Benincasa hispida]6.1e-6290.78Show/hide
Query:  MAVVVIDGSTVKNFVNDEAQFKKSIDEAFAALDLNCDGVLSRSELRKAFETLRLIETHFGVDEATPPEKLTQLYDSIFEQFDCDHSGTVDAEEFRSEMKN
        MAVVVIDGSTV+NFVNDE+ FKKSIDEAFAALDLN DGVLSRSELRKAFETLRLIETHFGVD  T PE+LTQLYDSIFEQFDCD SGTVDA+EFR+EMKN
Subjt:  MAVVVIDGSTVKNFVNDEAQFKKSIDEAFAALDLNCDGVLSRSELRKAFETLRLIETHFGVDEATPPEKLTQLYDSIFEQFDCDHSGTVDAEEFRSEMKN

Query:  ILLAIADGLGSSPIQMALHDGDQSFLKQAADLEASKLSQSS
        ILLAIADGLGSSPIQMAL DGDQSFLKQAADLEASKL+QSS
Subjt:  ILLAIADGLGSSPIQMALHDGDQSFLKQAADLEASKLSQSS

TrEMBL top hitse value%identityAlignment
A0A0A0L9X6 Uncharacterized protein2.5e-6189.36Show/hide
Query:  MAVVVIDGSTVKNFVNDEAQFKKSIDEAFAALDLNCDGVLSRSELRKAFETLRLIETHFGVDEATPPEKLTQLYDSIFEQFDCDHSGTVDAEEFRSEMKN
        MAVVV+DGSTV+NFVNDE+ F KSID+AFA+LDLN DGVLSRSELRKAFETLRLIETHFGVD AT PE+LTQLYDSIFEQFDCD SGTVDAEEFR+EMKN
Subjt:  MAVVVIDGSTVKNFVNDEAQFKKSIDEAFAALDLNCDGVLSRSELRKAFETLRLIETHFGVDEATPPEKLTQLYDSIFEQFDCDHSGTVDAEEFRSEMKN

Query:  ILLAIADGLGSSPIQMALHDGDQSFLKQAADLEASKLSQSS
        ILLAIADGLGSSPIQMAL DGDQSFLKQAADLEASKL QSS
Subjt:  ILLAIADGLGSSPIQMALHDGDQSFLKQAADLEASKLSQSS

A0A5A7UE76 Calcium-binding EF-hand5.6e-6189.36Show/hide
Query:  MAVVVIDGSTVKNFVNDEAQFKKSIDEAFAALDLNCDGVLSRSELRKAFETLRLIETHFGVDEATPPEKLTQLYDSIFEQFDCDHSGTVDAEEFRSEMKN
        MAVVVIDGSTV+NFVNDE  F KSID+AFA+LDLN DGVLSRSELRKAFETLRLIETHFGVD AT PE+LTQLYDSIFEQFDCD SGTVDAEEFR+EMKN
Subjt:  MAVVVIDGSTVKNFVNDEAQFKKSIDEAFAALDLNCDGVLSRSELRKAFETLRLIETHFGVDEATPPEKLTQLYDSIFEQFDCDHSGTVDAEEFRSEMKN

Query:  ILLAIADGLGSSPIQMALHDGDQSFLKQAADLEASKLSQSS
        ILLAIADGLGSSPIQMAL DGD+SFLKQAADLEASKL QSS
Subjt:  ILLAIADGLGSSPIQMALHDGDQSFLKQAADLEASKLSQSS

A0A6J1F6Q4 uncharacterized protein LOC1114413779.2e-6491.55Show/hide
Query:  MAVVVIDGSTVKNFVNDEAQFKKSIDEAFAALDLNCDGVLSRSELRKAFETLRLIETHFGVDEATPPEKLTQLYDSIFEQFDCDHSGTVDAEEFRSEMKN
        MAVVVIDGSTV+NFVNDE+ FKKS+DEAFAALDLN DGVLSRSELRKAFETLRLIETHFGVD  TPPEKLTQLYDSIFE+FDCD SGTVDAEEFR+EMKN
Subjt:  MAVVVIDGSTVKNFVNDEAQFKKSIDEAFAALDLNCDGVLSRSELRKAFETLRLIETHFGVDEATPPEKLTQLYDSIFEQFDCDHSGTVDAEEFRSEMKN

Query:  ILLAIADGLGSSPIQMALHDGDQSFLKQAADLEASKLSQSSA
        ILLAIADGLGSSPIQMAL DGDQSFLKQAADLEASKL+QSSA
Subjt:  ILLAIADGLGSSPIQMALHDGDQSFLKQAADLEASKLSQSSA

A0A6J1GC30 uncharacterized protein LOC1114526145.6e-6187.32Show/hide
Query:  MAVVVIDGSTVKNFVNDEAQFKKSIDEAFAALDLNCDGVLSRSELRKAFETLRLIETHFGVDEATPPEKLTQLYDSIFEQFDCDHSGTVDAEEFRSEMKN
        M VVVIDGSTV+NFVNDE+ FKKS+++AFAALDLN DGVLSR+ELRKAFETLRLIETHFGVD ATPPE+LTQLYDSIFEQFDCD SG+VDA+EFR+EMKN
Subjt:  MAVVVIDGSTVKNFVNDEAQFKKSIDEAFAALDLNCDGVLSRSELRKAFETLRLIETHFGVDEATPPEKLTQLYDSIFEQFDCDHSGTVDAEEFRSEMKN

Query:  ILLAIADGLGSSPIQMALHDGDQSFLKQAADLEASKLSQSSA
        ILLAIADGLGSSPIQMAL D DQSFLKQAADLEASKL+QSSA
Subjt:  ILLAIADGLGSSPIQMALHDGDQSFLKQAADLEASKLSQSSA

A0A6J1J7W5 uncharacterized protein LOC1114821603.2e-6492.25Show/hide
Query:  MAVVVIDGSTVKNFVNDEAQFKKSIDEAFAALDLNCDGVLSRSELRKAFETLRLIETHFGVDEATPPEKLTQLYDSIFEQFDCDHSGTVDAEEFRSEMKN
        MAVVVIDGSTV+NFVNDE+ FKKS+DEAFAALDLN DGVLSRSELRKAFETLRLIETHFGVD  TPPEKLTQLYDSIFEQFDCD SGTVDAEEFR+EMKN
Subjt:  MAVVVIDGSTVKNFVNDEAQFKKSIDEAFAALDLNCDGVLSRSELRKAFETLRLIETHFGVDEATPPEKLTQLYDSIFEQFDCDHSGTVDAEEFRSEMKN

Query:  ILLAIADGLGSSPIQMALHDGDQSFLKQAADLEASKLSQSSA
        ILLAIADGLGSSPIQMAL DGDQSFLKQAADLEASKL+QSSA
Subjt:  ILLAIADGLGSSPIQMALHDGDQSFLKQAADLEASKLSQSSA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G54530.1 Calcium-binding EF hand family protein4.0e-1132.5Show/hide
Query:  MAVVVIDGSTVKNFVNDEAQFKKSIDEAFAALDLNCDGVLSRSELRKAFETLRLIETHFGVDEATPPEKLTQLYDSIFEQFDCDHSGTVDAEEFRSEMKN
        M   VI   T+  F++D   F+   ++ F  LDL+ +G+LS SELR+    +  +E+     E  P ++   +Y++IFE+F  D    +  + FR  +  
Subjt:  MAVVVIDGSTVKNFVNDEAQFKKSIDEAFAALDLNCDGVLSRSELRKAFETLRLIETHFGVDEATPPEKLTQLYDSIFEQFDCDHSGTVDAEEFRSEMKN

Query:  ILLAIADGLGSSPIQMALHD
        IL A+A G+G+SP+ M +H+
Subjt:  ILLAIADGLGSSPIQMALHD

AT2G44310.1 Calcium-binding EF-hand family protein1.5e-5373.24Show/hide
Query:  MAVVVIDGSTVKNFVNDEAQFKKSIDEAFAALDLNCDGVLSRSELRKAFETLRLIETHFGVDEATPPEKLTQLYDSIFEQFDCDHSGTVDAEEFRSEMKN
        M VV+IDGSTV++FV+DE QFKKS+DE FAALDLN DGVLSRSELRKAFE++RL+E+HFGVD  TP ++LT LYDSIFE+FD D SG+VD EEFRSEMK 
Subjt:  MAVVVIDGSTVKNFVNDEAQFKKSIDEAFAALDLNCDGVLSRSELRKAFETLRLIETHFGVDEATPPEKLTQLYDSIFEQFDCDHSGTVDAEEFRSEMKN

Query:  ILLAIADGLGSSPIQMALHDGDQSFLKQAADLEASKLSQSSA
        I+LAIADGLGS PI M L D D +FLK+AADLEASKL ++S+
Subjt:  ILLAIADGLGSSPIQMALHDGDQSFLKQAADLEASKLSQSSA

AT4G38810.2 Calcium-binding EF-hand family protein5.4e-0831.09Show/hide
Query:  VIDGSTVKNFVNDEAQFKKSIDEAFAALDLNCDGVLSRSELRKAFETLRLIETHFGVD-EATPPEKLTQLYDSIFEQFDCDHSGTVDAEEFRSEMKNILL
        V+DGS +   V +E  F K +++ F  LD + DG LS +EL+ A      I    G+  + T P+    +Y  +  +F       V   EF+  + +ILL
Subjt:  VIDGSTVKNFVNDEAQFKKSIDEAFAALDLNCDGVLSRSELRKAFETLRLIETHFGVD-EATPPEKLTQLYDSIFEQFDCDHSGTVDAEEFRSEMKNILL

Query:  AIADGLGSSPIQMALHDGD
         +A GL   PI +   DG+
Subjt:  AIADGLGSSPIQMALHDGD

AT5G28830.1 calcium-binding EF hand family protein4.5e-1030.25Show/hide
Query:  MAVVVIDGSTVKNFVNDEAQFKKSIDEAFAALDLNCDGVLSRSELRKAFETLRLIETHFGVDEATPPEKLTQLYDSIFEQFDCDHSGTVDAEEFRSEMKN
        + V ++DG+ +K F+ DE  F    +  F  LD    G L +SE+RKA         H GV+   PP     + D I ++ D D    +   +F   ++ 
Subjt:  MAVVVIDGSTVKNFVNDEAQFKKSIDEAFAALDLNCDGVLSRSELRKAFETLRLIETHFGVDEATPPEKLTQLYDSIFEQFDCDHSGTVDAEEFRSEMKN

Query:  ILLAIADGLGSSPIQMALH
        +L  IAD L   PI + L+
Subjt:  ILLAIADGLGSSPIQMALH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGTGGTTGTAATCGACGGATCGACGGTGAAGAACTTCGTGAACGACGAAGCTCAGTTCAAGAAGAGCATCGACGAGGCCTTCGCCGCCCTGGATCTGAACTGCGA
CGGCGTCCTGTCCCGCTCGGAGCTCCGGAAGGCCTTCGAGACGCTCCGGCTGATCGAGACCCACTTCGGCGTCGACGAGGCCACTCCGCCGGAGAAGCTCACGCAGCTCT
ACGATTCCATCTTCGAGCAGTTCGACTGCGACCACAGCGGCACCGTGGACGCCGAGGAGTTTCGGAGCGAGATGAAGAACATCCTCCTCGCCATCGCCGACGGATTAGGC
TCCTCCCCCATCCAGATGGCCCTCCACGACGGCGACCAGAGTTTCCTCAAGCAGGCCGCCGATCTCGAGGCCTCTAAGCTCTCCCAATCGTCCGCCTGA
mRNA sequenceShow/hide mRNA sequence
AGAGAGAGAAAGGAAGAGAGAGAGAGAAAGAGAAAGGTAGAGAGAGAGAGAAAGAGAAAGGTAGAGAGAGAAAGAGAGGAAAAATGGCAGTGGTTGTAATCGACGGATCG
ACGGTGAAGAACTTCGTGAACGACGAAGCTCAGTTCAAGAAGAGCATCGACGAGGCCTTCGCCGCCCTGGATCTGAACTGCGACGGCGTCCTGTCCCGCTCGGAGCTCCG
GAAGGCCTTCGAGACGCTCCGGCTGATCGAGACCCACTTCGGCGTCGACGAGGCCACTCCGCCGGAGAAGCTCACGCAGCTCTACGATTCCATCTTCGAGCAGTTCGACT
GCGACCACAGCGGCACCGTGGACGCCGAGGAGTTTCGGAGCGAGATGAAGAACATCCTCCTCGCCATCGCCGACGGATTAGGCTCCTCCCCCATCCAGATGGCCCTCCAC
GACGGCGACCAGAGTTTCCTCAAGCAGGCCGCCGATCTCGAGGCCTCTAAGCTCTCCCAATCGTCCGCCTGATCGCCATCCCTACGCTTTGCCCTTTCCGTTTCCGTTTC
CTCTGTTCTTCCCTTTTTGTTTAATGTTTTGTTAGTCACCGATATGATTATGTGTGTGAATCTGATTACGGAATAAAATTCATCCTGTTTTCCTGTTTATGCTGGAAACT
GGAAATGCCCATCCAAACTATAGAACAATTTCTAAAATGGGGAAATTTGTTCTTCTTTTTTTATTTCTTCTTTTTCTCACGATATATTCTAGAATTTACCCTCTGGTTCA
TGGAAACAGTATTCTTCACGACGGAACGGCGTCTAATGACTTTTTGGCCATGGGTTTGAATTTGAGATTAATAATATATGTTTTCATTTTCTTCTA
Protein sequenceShow/hide protein sequence
MAVVVIDGSTVKNFVNDEAQFKKSIDEAFAALDLNCDGVLSRSELRKAFETLRLIETHFGVDEATPPEKLTQLYDSIFEQFDCDHSGTVDAEEFRSEMKNILLAIADGLG
SSPIQMALHDGDQSFLKQAADLEASKLSQSSA