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Sed0007534 (gene) of Chayote v1 genome

Gene IDSed0007534
OrganismSechium edule (Chayote v1)
DescriptionSodium/calcium exchanger membrane region
Genome locationLG08:3181791..3182354
RNA-Seq ExpressionSed0007534
SyntenySed0007534
Gene Ontology termsNA
InterPro domainsIPR007789 - Protein of unknown function DUF688


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058272.1 hypothetical protein E6C27_scaffold274G005980 [Cucumis melo var. makuwa]2.8e-4663.78Show/hide
Query:  AKDHHHPPLH-ISEKPFSLLQQNDLFVNKILSRPDSSFGRSARLPACRLPGRIPFNWEAQPGLPKHHSSAIPPPADLPPPAAAG---SNTTHVVPKLDPV
        AKDH    LH +SEKPFSLLQ N  FV+KILSR +SSFGRSARLPAC LPG+IPFNWE QPGLPK+  S  PPPA+LPPP+++    S T HVVPK  PV
Subjt:  AKDHHHPPLH-ISEKPFSLLQQNDLFVNKILSRPDSSFGRSARLPACRLPGRIPFNWEAQPGLPKHHSSAIPPPADLPPPAAAG---SNTTHVVPKLDPV

Query:  YKVWFLKKPMRRLRSGVVKQNGAFGSSSS-RRHVVRESESESGRKLNDE----SSLSCVTYSLSRSSSLPSSSNGY-GRRRFKLGGLVKGFIMWAF
         K+WF  K  R+ R   VK+NGA GSSSS RRHV RESE    RK NDE    SSLSC++YSLS +SS  SSS+ Y  RRR KLG L K FI WAF
Subjt:  YKVWFLKKPMRRLRSGVVKQNGAFGSSSS-RRHVVRESESESGRKLNDE----SSLSCVTYSLSRSSSLPSSSNGY-GRRRFKLGGLVKGFIMWAF

KAG6589705.1 Replication protein A 32 kDa subunit B, partial [Cucurbita argyrosperma subsp. sororia]4.6e-4160.22Show/hide
Query:  MAKDHHHPPLHISEKPFSLLQQNDLFVNKILSRPDSSFGRSARLPACRLPGRIPFNWEAQPGLPKHHSSAIPPPADLPPPAAAGSNTTHVVPKLDPVYKV
        M  +H    LH+SE PFSLLQ N+LFV+KILSR +SS GRSARLPACRLPG+IPF WEAQPGLPK   S    P   P      S T H VP+     K+
Subjt:  MAKDHHHPPLHISEKPFSLLQQNDLFVNKILSRPDSSFGRSARLPACRLPGRIPFNWEAQPGLPKHHSSAIPPPADLPPPAAAGSNTTHVVPKLDPVYKV

Query:  WFLKKPMRRLRSGVVKQNGAFG-SSSSRRHVVRESESESGRKLNDE--SSLSCVTYSLSRSSSLPSSSNGYGRRRFKLGGLVKGFI
        WF  KP ++LR+ VVK+NGAFG SSSSRRHV    ESE  RK NDE  SSLSC+++SLS SS   SSSNGY RRR KL  L KGF+
Subjt:  WFLKKPMRRLRSGVVKQNGAFG-SSSSRRHVVRESESESGRKLNDE--SSLSCVTYSLSRSSSLPSSSNGYGRRRFKLGGLVKGFI

KGN65459.1 hypothetical protein Csa_020126 [Cucumis sativus]8.1e-4661.54Show/hide
Query:  AKDHHHPPLH-ISEKPFSLLQQNDLFVNKILSRPDSSFGRSARLPACRLPGRIPFNWEAQPGLPKHHSSAIPPPADLPPPAAAG---SNTTHVVPKLDPV
        AKDH    LH +SEKPFSLLQ N LFV+KILSR +SSFGRSARLPAC LPG++PFNWEAQPGLPK+  S  PPP  LPPP+++    S T HVVPK  PV
Subjt:  AKDHHHPPLH-ISEKPFSLLQQNDLFVNKILSRPDSSFGRSARLPACRLPGRIPFNWEAQPGLPKHHSSAIPPPADLPPPAAAG---SNTTHVVPKLDPV

Query:  YKVWFLKKPMRRLRSGVVKQNGAFGSSSSRRHVVRESESESGRKLNDE----SSLSCVTYSLSRSSSLPSSSNGY-GRRRFKLGGLVKGFIMWAF
         K+WF  K  R+ R   VK++GA GSSS RRHV R+SE    +K NDE    SSLSC++YS+S +SS  SSS+ Y  RRR+KLG L K FI WAF
Subjt:  YKVWFLKKPMRRLRSGVVKQNGAFGSSSSRRHVVRESESESGRKLNDE----SSLSCVTYSLSRSSSLPSSSNGY-GRRRFKLGGLVKGFIMWAF

TYK11824.1 hypothetical protein E5676_scaffold152G00370 [Cucumis melo var. makuwa]1.1e-4563.27Show/hide
Query:  AKDHHHPPLH-ISEKPFSLLQQNDLFVNKILSRPDSSFGRSARLPACRLPGRIPFNWEAQPGLPKHHSSAIPPPADLPPPAAAG---SNTTHVVPKLDPV
        AKDH    LH +SEKPFSLLQ N  FV+KILSR +SSFGRSARLPAC LPG+IPFNWE QPGLPK+  S  PPPA+LPPP+++    S T HVVPK  PV
Subjt:  AKDHHHPPLH-ISEKPFSLLQQNDLFVNKILSRPDSSFGRSARLPACRLPGRIPFNWEAQPGLPKHHSSAIPPPADLPPPAAAG---SNTTHVVPKLDPV

Query:  YKVWFLKKPMRRLRSGVVKQNGAFGSSSS-RRHVVRESESESGRKLND----ESSLSCVTYSLSRSSSLPSSSNGY-GRRRFKLGGLVKGFIMWAF
         K+WF  K  R+ R   VK+NGA GSSSS RRHV RESE    RK ND     SSLSC++YSLS +SS  SSS+ Y  RRR KLG L K FI WAF
Subjt:  YKVWFLKKPMRRLRSGVVKQNGAFGSSSS-RRHVVRESESESGRKLND----ESSLSCVTYSLSRSSSLPSSSNGY-GRRRFKLGGLVKGFIMWAF

XP_022987494.1 uncharacterized protein LOC111485037 [Cucurbita maxima]4.6e-4159.9Show/hide
Query:  MAKDHHHPPLHISEKPFSLLQQNDLFVNKILSRPDSSFGRSARLPACRLPGRIPFNWEAQPGLPKHHSS--AIPPPADLPPPAAAG-SNTTHVVPKLDPV
        M  DH    LH SE PFSLLQ N+LFV+KILSR +SS GRSARLPACRLPG+IPF WEAQPGLPK   S    PPP   PP    G S T H VPK    
Subjt:  MAKDHHHPPLHISEKPFSLLQQNDLFVNKILSRPDSSFGRSARLPACRLPGRIPFNWEAQPGLPKHHSS--AIPPPADLPPPAAAG-SNTTHVVPKLDPV

Query:  YKVWFLKKPMRRLRSGVVKQNGAFGSSSSRRHVVRESESESGRKLNDE-------SSLSCVTYSLSRSSSLPSSSNGYGRRRFKLGGLVKGFIMWAF
         K+W   KP ++LR+ VVK+NGAFGSSSS R  V + ESE  RK NDE       SSLSC+++SLS SS   SSSNGY RRR KL  L KGF+ WAF
Subjt:  YKVWFLKKPMRRLRSGVVKQNGAFGSSSSRRHVVRESESESGRKLNDE-------SSLSCVTYSLSRSSSLPSSSNGYGRRRFKLGGLVKGFIMWAF

TrEMBL top hitse value%identityAlignment
A0A0A0LWV3 Uncharacterized protein3.9e-4661.54Show/hide
Query:  AKDHHHPPLH-ISEKPFSLLQQNDLFVNKILSRPDSSFGRSARLPACRLPGRIPFNWEAQPGLPKHHSSAIPPPADLPPPAAAG---SNTTHVVPKLDPV
        AKDH    LH +SEKPFSLLQ N LFV+KILSR +SSFGRSARLPAC LPG++PFNWEAQPGLPK+  S  PPP  LPPP+++    S T HVVPK  PV
Subjt:  AKDHHHPPLH-ISEKPFSLLQQNDLFVNKILSRPDSSFGRSARLPACRLPGRIPFNWEAQPGLPKHHSSAIPPPADLPPPAAAG---SNTTHVVPKLDPV

Query:  YKVWFLKKPMRRLRSGVVKQNGAFGSSSSRRHVVRESESESGRKLNDE----SSLSCVTYSLSRSSSLPSSSNGY-GRRRFKLGGLVKGFIMWAF
         K+WF  K  R+ R   VK++GA GSSS RRHV R+SE    +K NDE    SSLSC++YS+S +SS  SSS+ Y  RRR+KLG L K FI WAF
Subjt:  YKVWFLKKPMRRLRSGVVKQNGAFGSSSSRRHVVRESESESGRKLNDE----SSLSCVTYSLSRSSSLPSSSNGY-GRRRFKLGGLVKGFIMWAF

A0A3S4PJS0 Putative OSBPoxysterol binding protein-related protein 4B1.8e-0636.69Show/hide
Query:  SLLQQNDLFVNKILSRPDSSFGRSARLPACRLPGRIPFNWEAQPGLPKHHSSAIPPPADLPPPAAAGSNTTHV-VPKLDPVYKVWF--LKKPMRRLRSGV
        SLL+  +LF N+ILSR DSS G S+R+   ++ G++PF WEA+PG+PK    A P P   PPPA    + +H  V K     ++WF   KK  +  +S  
Subjt:  SLLQQNDLFVNKILSRPDSSFGRSARLPACRLPGRIPFNWEAQPGLPKHHSSAIPPPADLPPPAAAGSNTTHV-VPKLDPVYKVWF--LKKPMRRLRSGV

Query:  VKQNGAFGSSSSRRHVVRESESESGRKLNDESSLSCVTY
          Q G+  S  S  +    + S S    N  SS S  ++
Subjt:  VKQNGAFGSSSSRRHVVRESESESGRKLNDESSLSCVTY

A0A5A7UQX0 Uncharacterized protein1.4e-4663.78Show/hide
Query:  AKDHHHPPLH-ISEKPFSLLQQNDLFVNKILSRPDSSFGRSARLPACRLPGRIPFNWEAQPGLPKHHSSAIPPPADLPPPAAAG---SNTTHVVPKLDPV
        AKDH    LH +SEKPFSLLQ N  FV+KILSR +SSFGRSARLPAC LPG+IPFNWE QPGLPK+  S  PPPA+LPPP+++    S T HVVPK  PV
Subjt:  AKDHHHPPLH-ISEKPFSLLQQNDLFVNKILSRPDSSFGRSARLPACRLPGRIPFNWEAQPGLPKHHSSAIPPPADLPPPAAAG---SNTTHVVPKLDPV

Query:  YKVWFLKKPMRRLRSGVVKQNGAFGSSSS-RRHVVRESESESGRKLNDE----SSLSCVTYSLSRSSSLPSSSNGY-GRRRFKLGGLVKGFIMWAF
         K+WF  K  R+ R   VK+NGA GSSSS RRHV RESE    RK NDE    SSLSC++YSLS +SS  SSS+ Y  RRR KLG L K FI WAF
Subjt:  YKVWFLKKPMRRLRSGVVKQNGAFGSSSS-RRHVVRESESESGRKLNDE----SSLSCVTYSLSRSSSLPSSSNGY-GRRRFKLGGLVKGFIMWAF

A0A5D3CKX4 Uncharacterized protein5.1e-4663.27Show/hide
Query:  AKDHHHPPLH-ISEKPFSLLQQNDLFVNKILSRPDSSFGRSARLPACRLPGRIPFNWEAQPGLPKHHSSAIPPPADLPPPAAAG---SNTTHVVPKLDPV
        AKDH    LH +SEKPFSLLQ N  FV+KILSR +SSFGRSARLPAC LPG+IPFNWE QPGLPK+  S  PPPA+LPPP+++    S T HVVPK  PV
Subjt:  AKDHHHPPLH-ISEKPFSLLQQNDLFVNKILSRPDSSFGRSARLPACRLPGRIPFNWEAQPGLPKHHSSAIPPPADLPPPAAAG---SNTTHVVPKLDPV

Query:  YKVWFLKKPMRRLRSGVVKQNGAFGSSSS-RRHVVRESESESGRKLND----ESSLSCVTYSLSRSSSLPSSSNGY-GRRRFKLGGLVKGFIMWAF
         K+WF  K  R+ R   VK+NGA GSSSS RRHV RESE    RK ND     SSLSC++YSLS +SS  SSS+ Y  RRR KLG L K FI WAF
Subjt:  YKVWFLKKPMRRLRSGVVKQNGAFGSSSS-RRHVVRESESESGRKLND----ESSLSCVTYSLSRSSSLPSSSNGY-GRRRFKLGGLVKGFIMWAF

A0A6J1JJ17 uncharacterized protein LOC1114850372.2e-4159.9Show/hide
Query:  MAKDHHHPPLHISEKPFSLLQQNDLFVNKILSRPDSSFGRSARLPACRLPGRIPFNWEAQPGLPKHHSS--AIPPPADLPPPAAAG-SNTTHVVPKLDPV
        M  DH    LH SE PFSLLQ N+LFV+KILSR +SS GRSARLPACRLPG+IPF WEAQPGLPK   S    PPP   PP    G S T H VPK    
Subjt:  MAKDHHHPPLHISEKPFSLLQQNDLFVNKILSRPDSSFGRSARLPACRLPGRIPFNWEAQPGLPKHHSS--AIPPPADLPPPAAAG-SNTTHVVPKLDPV

Query:  YKVWFLKKPMRRLRSGVVKQNGAFGSSSSRRHVVRESESESGRKLNDE-------SSLSCVTYSLSRSSSLPSSSNGYGRRRFKLGGLVKGFIMWAF
         K+W   KP ++LR+ VVK+NGAFGSSSS R  V + ESE  RK NDE       SSLSC+++SLS SS   SSSNGY RRR KL  L KGF+ WAF
Subjt:  YKVWFLKKPMRRLRSGVVKQNGAFGSSSSRRHVVRESESESGRKLNDE-------SSLSCVTYSLSRSSSLPSSSNGYGRRRFKLGGLVKGFIMWAF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAAAGATCATCATCATCCTCCTCTCCATATCTCTGAAAAACCCTTTTCATTACTCCAACAAAATGACTTATTCGTCAACAAAATCCTCTCAAGGCCCGACTCCTC
GTTCGGCCGATCTGCCCGTCTCCCCGCCTGCCGCCTGCCCGGTCGAATCCCCTTCAATTGGGAGGCTCAGCCCGGCCTGCCCAAACACCATTCGTCGGCAATTCCCCCGC
CGGCAGACCTTCCGCCGCCCGCCGCCGCCGGTTCCAACACTACACACGTAGTCCCCAAACTGGACCCGGTTTATAAGGTTTGGTTTTTGAAGAAGCCCATGAGAAGATTG
AGGAGTGGGGTGGTTAAGCAAAACGGTGCGTTTGGATCGTCCTCCTCCCGACGACATGTCGTTCGTGAGAGTGAGAGTGAGAGTGGGAGAAAATTGAACGACGAGTCGTC
GCTGTCTTGTGTTACGTATTCTTTGTCTCGTAGCTCTTCTTTGCCTTCGTCGTCAAATGGCTACGGGCGACGGCGATTTAAACTCGGCGGTTTGGTTAAAGGCTTCATAA
TGTGGGCGTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAAAAGATCATCATCATCCTCCTCTCCATATCTCTGAAAAACCCTTTTCATTACTCCAACAAAATGACTTATTCGTCAACAAAATCCTCTCAAGGCCCGACTCCTC
GTTCGGCCGATCTGCCCGTCTCCCCGCCTGCCGCCTGCCCGGTCGAATCCCCTTCAATTGGGAGGCTCAGCCCGGCCTGCCCAAACACCATTCGTCGGCAATTCCCCCGC
CGGCAGACCTTCCGCCGCCCGCCGCCGCCGGTTCCAACACTACACACGTAGTCCCCAAACTGGACCCGGTTTATAAGGTTTGGTTTTTGAAGAAGCCCATGAGAAGATTG
AGGAGTGGGGTGGTTAAGCAAAACGGTGCGTTTGGATCGTCCTCCTCCCGACGACATGTCGTTCGTGAGAGTGAGAGTGAGAGTGGGAGAAAATTGAACGACGAGTCGTC
GCTGTCTTGTGTTACGTATTCTTTGTCTCGTAGCTCTTCTTTGCCTTCGTCGTCAAATGGCTACGGGCGACGGCGATTTAAACTCGGCGGTTTGGTTAAAGGCTTCATAA
TGTGGGCGTTTTGA
Protein sequenceShow/hide protein sequence
MAKDHHHPPLHISEKPFSLLQQNDLFVNKILSRPDSSFGRSARLPACRLPGRIPFNWEAQPGLPKHHSSAIPPPADLPPPAAAGSNTTHVVPKLDPVYKVWFLKKPMRRL
RSGVVKQNGAFGSSSSRRHVVRESESESGRKLNDESSLSCVTYSLSRSSSLPSSSNGYGRRRFKLGGLVKGFIMWAF