CuGenDBv2

Gene ID	Sed0007536
Organism	Sechium edule (Chayote v1)
Description	DNA-directed RNA polymerase III subunit RPC3
Genome location	LG13:831766..843295
RNA-Seq Expression	Sed0007536
Synteny	Sed0007536
Gene Ontology terms	GO:0006351 - transcription, DNA-templated (biological process) GO:0005666 - RNA polymerase III complex (cellular component) GO:0003697 - single-stranded DNA binding (molecular function) GO:0003899 - DNA-directed 5'-3' RNA polymerase activity (molecular function)
InterPro domains	IPR008806 - RNA polymerase III Rpc82, C -terminal IPR013197 - RNA polymerase III subunit RPC82-related, helix-turn-helix IPR036388 - Winged helix-like DNA-binding domain superfamily IPR039748 - DNA-directed RNA polymerase III subunit RPC3

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6574180.1 DNA-directed RNA polymerase III subunit RPC3, partial [Cucurbita argyrosperma subsp. sororia]

4.3e-238

82.6

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Query:  MVMTQYGIKYAVYIITEHFGNLVAKVCETLLRRGPLTLRLLVRFTELSSSQVNNCLLILIQHNCVQAFTAVTEGEFGAAPKSDTQYLALFSYILHRMRFS
        M  TQYGIKYAV+IIT HFGNLVAKVCETLLRRGPLTLRLLVRFTELSSSQ+NN LLILIQHNCVQAFTAVTEGEFG APK+DTQYLALFS ILHRMRFS
Subjt:  MVMTQYGIKYAVYIITEHFGNLVAKVCETLLRRGPLTLRLLVRFTELSSSQVNNCLLILIQHNCVQAFTAVTEGEFGAAPKSDTQYLALFSYILHRMRFS

Query:  KFMAIALEKLEKDEACEKLLEGLLQNGRLSMEQIIERADSFKHEGNHSIPDVVR----KLLTARFIERCPAPEPTLSPEVEEQAPPRKRGAKAAKVFKVP
        KF+AIA EKLEKD+ CE+LLEGLLQNGRLSMEQIIERA S KH GN  IPDVV     KLL A F+ERCPAPEPTLSP+VEEQ PPRKRGAKAAKV +VP
Subjt:  KFMAIALEKLEKDEACEKLLEGLLQNGRLSMEQIIERADSFKHEGNHSIPDVVR----KLLTARFIERCPAPEPTLSPEVEEQAPPRKRGAKAAKVFKVP

Query:  VTLEQRVVESARPVEVIRFSIDETNTDPEKGEHNSPVSGQKRKHGDLEMMVQESGDADAIIILRANFDEFMRCLRHKACIEHVKSQFDDGVVTVLSAILE
         TLEQR+VESARP+EVIRFSI ETNT+ E+ EH S +SGQKRK GDL+  +QESGDAD II+ RANFDEF+RCLRHKACIEHV+SQFDDG V VLSAILE
Subjt:  VTLEQRVVESARPVEVIRFSIDETNTDPEKGEHNSPVSGQKRKHGDLEMMVQESGDADAIIILRANFDEFMRCLRHKACIEHVKSQFDDGVVTVLSAILE

Query:  ATRSSEKSVKTDITVPLSVDSIYEEATKTEVGRSMTLDRVEASLSALGCSGTEDYKINLQKIIEQAQIDEVESVVLKRYGRDAYRMFRFLSKTGGLVETE
        ATRSSEK VKT+ITVPLS+D+IYEE  K EVGRSMTLDRVEASLSALGCSG EDYKINLQKIIEQAQIDEVES+VLKRYGRDAYRMFRFLSKTGGLVETE
Subjt:  ATRSSEKSVKTDITVPLSVDSIYEEATKTEVGRSMTLDRVEASLSALGCSGTEDYKINLQKIIEQAQIDEVESVVLKRYGRDAYRMFRFLSKTGGLVETE

Query:  KISDSAFVDKNEAPKILYKMWKDEYLHMEKVTITVPRYSLCLLWRVDRFNVWEHVLDEMYHASLNLHLRLAYEVEQNKEVRSIPRAKLSGALEKQHSHWR
        KISDSAFVDKNEAPKILY++WKDEYL+MEKV ITVPR+SLCLLWRVDR+N+WEHVLDEMYHASLNL LR AYE+EQ+KE+ ++P  K  G LEK+++  R
Subjt:  KISDSAFVDKNEAPKILYKMWKDEYLHMEKVTITVPRYSLCLLWRVDRFNVWEHVLDEMYHASLNLHLRLAYEVEQNKEVRSIPRAKLSGALEKQHSHWR

Query:  KVGILLWSSLLKLDDALMLFHDF
         V ILL SSLLKLDDALMLFHDF
Subjt:  KVGILLWSSLLKLDDALMLFHDF

XP_022945853.1 DNA-directed RNA polymerase III subunit RPC3 [Cucurbita moschata]

8.7e-239

82.79

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Query:  MVMTQYGIKYAVYIITEHFGNLVAKVCETLLRRGPLTLRLLVRFTELSSSQVNNCLLILIQHNCVQAFTAVTEGEFGAAPKSDTQYLALFSYILHRMRFS
        M  TQYGIKYAV+IIT HFGNLVAKVCETLLRRGPLTLRLLVRFTELSSSQ+NN LLILIQHNCVQAFTAVTEGEFG APK+DTQYLALFS ILHRMRFS
Subjt:  MVMTQYGIKYAVYIITEHFGNLVAKVCETLLRRGPLTLRLLVRFTELSSSQVNNCLLILIQHNCVQAFTAVTEGEFGAAPKSDTQYLALFSYILHRMRFS

Query:  KFMAIALEKLEKDEACEKLLEGLLQNGRLSMEQIIERADSFKHEGNHSIPDVVR----KLLTARFIERCPAPEPTLSPEVEEQAPPRKRGAKAAKVFKVP
        KF+AIA EKLEKD+ CE+LLEGLLQNGRLSMEQIIERA S KH GN  IPDVV     KLL A F+ERCPAPEPTLSP+VEEQ PPRKRGAKAAKV +VP
Subjt:  KFMAIALEKLEKDEACEKLLEGLLQNGRLSMEQIIERADSFKHEGNHSIPDVVR----KLLTARFIERCPAPEPTLSPEVEEQAPPRKRGAKAAKVFKVP

Query:  VTLEQRVVESARPVEVIRFSIDETNTDPEKGEHNSPVSGQKRKHGDLEMMVQESGDADAIIILRANFDEFMRCLRHKACIEHVKSQFDDGVVTVLSAILE
         TLEQR+VESARP+EVIRFSI ETNT+ E+ EH S +SGQKRK GDL+ M+QESGDAD II+ RANFDEF+RCLRHKACIEHV+SQFDDG V VLSAILE
Subjt:  VTLEQRVVESARPVEVIRFSIDETNTDPEKGEHNSPVSGQKRKHGDLEMMVQESGDADAIIILRANFDEFMRCLRHKACIEHVKSQFDDGVVTVLSAILE

Query:  ATRSSEKSVKTDITVPLSVDSIYEEATKTEVGRSMTLDRVEASLSALGCSGTEDYKINLQKIIEQAQIDEVESVVLKRYGRDAYRMFRFLSKTGGLVETE
        ATRSSEK VKT+ITVPLS+D+IYEE  K EVGRSMTLDRVEASLSALGCSG EDYKINLQKIIEQAQIDEVES+VLKRYGRDAYRMFRFLSKTGGLVETE
Subjt:  ATRSSEKSVKTDITVPLSVDSIYEEATKTEVGRSMTLDRVEASLSALGCSGTEDYKINLQKIIEQAQIDEVESVVLKRYGRDAYRMFRFLSKTGGLVETE

Query:  KISDSAFVDKNEAPKILYKMWKDEYLHMEKVTITVPRYSLCLLWRVDRFNVWEHVLDEMYHASLNLHLRLAYEVEQNKEVRSIPRAKLSGALEKQHSHWR
        KISDSAFVDKNEAPKILY++WKDEYL+MEKV ITVPR+SLCLLWRVDR+N+WEHVLDEMYHASLNL LR AYE+EQ+KE+ ++P  K  G LEK+++  R
Subjt:  KISDSAFVDKNEAPKILYKMWKDEYLHMEKVTITVPRYSLCLLWRVDRFNVWEHVLDEMYHASLNLHLRLAYEVEQNKEVRSIPRAKLSGALEKQHSHWR

Query:  KVGILLWSSLLKLDDALMLFHDF
         V ILL SSLLKLDDALMLFHDF
Subjt:  KVGILLWSSLLKLDDALMLFHDF

XP_022968436.1 DNA-directed RNA polymerase III subunit RPC3 [Cucurbita maxima]

8.7e-239

82.6

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Query:  MVMTQYGIKYAVYIITEHFGNLVAKVCETLLRRGPLTLRLLVRFTELSSSQVNNCLLILIQHNCVQAFTAVTEGEFGAAPKSDTQYLALFSYILHRMRFS
        M  TQYGIKYAV+IIT HFGNLVAKVCETLLRRGPLTLRLL+RFTELSSSQ+NN LLILIQHNCVQAFTAVTEGEFG APK+DTQYLALFS ILHRMRFS
Subjt:  MVMTQYGIKYAVYIITEHFGNLVAKVCETLLRRGPLTLRLLVRFTELSSSQVNNCLLILIQHNCVQAFTAVTEGEFGAAPKSDTQYLALFSYILHRMRFS

Query:  KFMAIALEKLEKDEACEKLLEGLLQNGRLSMEQIIERADSFKHEGNHSIPDVVR----KLLTARFIERCPAPEPTLSPEVEEQAPPRKRGAKAAKVFKVP
        KF+AIA EKLEKD+ CE+LLEGLLQNGRLSMEQIIERA S KH GN  IPDVV     KLL A F+ERCPAPEPTLSP+VEEQ PPRKRGAKAAKV +VP
Subjt:  KFMAIALEKLEKDEACEKLLEGLLQNGRLSMEQIIERADSFKHEGNHSIPDVVR----KLLTARFIERCPAPEPTLSPEVEEQAPPRKRGAKAAKVFKVP

Query:  VTLEQRVVESARPVEVIRFSIDETNTDPEKGEHNSPVSGQKRKHGDLEMMVQESGDADAIIILRANFDEFMRCLRHKACIEHVKSQFDDGVVTVLSAILE
         TLEQR+VESARP+EVIRFSI ETNT+ E+ EH S +SGQKRK GDL+ M+QESGDAD II+ RANFDEF+RCLRHKACIEHV+SQFDDG V VLSAILE
Subjt:  VTLEQRVVESARPVEVIRFSIDETNTDPEKGEHNSPVSGQKRKHGDLEMMVQESGDADAIIILRANFDEFMRCLRHKACIEHVKSQFDDGVVTVLSAILE

Query:  ATRSSEKSVKTDITVPLSVDSIYEEATKTEVGRSMTLDRVEASLSALGCSGTEDYKINLQKIIEQAQIDEVESVVLKRYGRDAYRMFRFLSKTGGLVETE
        ATRSSEK VKT+ITVPLS+++IYEE  K EVGRSMTLDRVEASLSALGCSG EDYKINLQKIIEQAQIDEVES+VLKRYGRDAYRMFRFLSKTGGLVETE
Subjt:  ATRSSEKSVKTDITVPLSVDSIYEEATKTEVGRSMTLDRVEASLSALGCSGTEDYKINLQKIIEQAQIDEVESVVLKRYGRDAYRMFRFLSKTGGLVETE

Query:  KISDSAFVDKNEAPKILYKMWKDEYLHMEKVTITVPRYSLCLLWRVDRFNVWEHVLDEMYHASLNLHLRLAYEVEQNKEVRSIPRAKLSGALEKQHSHWR
        KISDSAFVDKNEAPKILY++WKDEYL+MEKV ITVPRYSLCLLWRVDR+N+WEHVLDEMYHASLNL LR AYE+EQ+KE+ ++P  K  G LEK+++  R
Subjt:  KISDSAFVDKNEAPKILYKMWKDEYLHMEKVTITVPRYSLCLLWRVDRFNVWEHVLDEMYHASLNLHLRLAYEVEQNKEVRSIPRAKLSGALEKQHSHWR

Query:  KVGILLWSSLLKLDDALMLFHDF
         V ILL SSLLKLDDALMLFHDF
Subjt:  KVGILLWSSLLKLDDALMLFHDF

XP_023541704.1 DNA-directed RNA polymerase III subunit RPC3 [Cucurbita pepo subsp. pepo]

5.6e-238

82.41

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Query:  MVMTQYGIKYAVYIITEHFGNLVAKVCETLLRRGPLTLRLLVRFTELSSSQVNNCLLILIQHNCVQAFTAVTEGEFGAAPKSDTQYLALFSYILHRMRFS
        M  TQYGIKYAV+IIT HFGNLVAKVCETLLRRGPLTLRLLVRFTELSSSQ+NN LLILIQHNCVQAFTAVTEGEFG APK+DTQYLALFS ILHRMRFS
Subjt:  MVMTQYGIKYAVYIITEHFGNLVAKVCETLLRRGPLTLRLLVRFTELSSSQVNNCLLILIQHNCVQAFTAVTEGEFGAAPKSDTQYLALFSYILHRMRFS

Query:  KFMAIALEKLEKDEACEKLLEGLLQNGRLSMEQIIERADSFKHEGNHSIPDVVR----KLLTARFIERCPAPEPTLSPEVEEQAPPRKRGAKAAKVFKVP
        KF+AIA EKLEKD+ CE+LLEGLLQNGRLSMEQIIERA S KH GN   PDVV     KLL A F+ERCPAPEPTLSP+VEEQ PPRKRGAKAAKV +VP
Subjt:  KFMAIALEKLEKDEACEKLLEGLLQNGRLSMEQIIERADSFKHEGNHSIPDVVR----KLLTARFIERCPAPEPTLSPEVEEQAPPRKRGAKAAKVFKVP

Query:  VTLEQRVVESARPVEVIRFSIDETNTDPEKGEHNSPVSGQKRKHGDLEMMVQESGDADAIIILRANFDEFMRCLRHKACIEHVKSQFDDGVVTVLSAILE
         TLEQR+VESARP+EVIRFSI ETNT+ E+ EH S +SGQKRK GDL+ M+QESGDAD II+ RANFDEF+RCLRHKACIEHV+SQFDDG V VLSAILE
Subjt:  VTLEQRVVESARPVEVIRFSIDETNTDPEKGEHNSPVSGQKRKHGDLEMMVQESGDADAIIILRANFDEFMRCLRHKACIEHVKSQFDDGVVTVLSAILE

Query:  ATRSSEKSVKTDITVPLSVDSIYEEATKTEVGRSMTLDRVEASLSALGCSGTEDYKINLQKIIEQAQIDEVESVVLKRYGRDAYRMFRFLSKTGGLVETE
        ATRSSEK VKT+ITVPLS+D+IYEE  K EVGRSMTLDRVEASLSALGCSG EDYKINLQKIIEQAQIDEVES+VLKRYGRDAYRMFRFLSKTGGLVETE
Subjt:  ATRSSEKSVKTDITVPLSVDSIYEEATKTEVGRSMTLDRVEASLSALGCSGTEDYKINLQKIIEQAQIDEVESVVLKRYGRDAYRMFRFLSKTGGLVETE

Query:  KISDSAFVDKNEAPKILYKMWKDEYLHMEKVTITVPRYSLCLLWRVDRFNVWEHVLDEMYHASLNLHLRLAYEVEQNKEVRSIPRAKLSGALEKQHSHWR
        KISDSAFVDKNEAPKILY++WKDEYL+MEKV IT+PR+SLCLLWRVDR+N+WEHVLDEMYHASLNL LR AYE+EQ+KE+ ++P  K  G LEK+++  R
Subjt:  KISDSAFVDKNEAPKILYKMWKDEYLHMEKVTITVPRYSLCLLWRVDRFNVWEHVLDEMYHASLNLHLRLAYEVEQNKEVRSIPRAKLSGALEKQHSHWR

Query:  KVGILLWSSLLKLDDALMLFHDF
         V ILL SSLLKLDDALMLFHDF
Subjt:  KVGILLWSSLLKLDDALMLFHDF

XP_038878061.1 DNA-directed RNA polymerase III subunit RPC3 isoform X1 [Benincasa hispida]

1.6e-232

79.54

Show/hide

Query:  MVMTQYGIKYAVYIITEHFGNLVAKVCETLLRRGPLTLRLLVRFTELSSSQVNNCLLILIQHNCVQAFTAVTEGEFGAAPKSDTQYLALFSYILHRMRFS
        MVMTQYGIKYAV+IIT HFGNLVAKVCETLLRRGPLTLRLL+RFTEL+SSQVNN LLILIQHNCVQAFTAVTEGEFG APK+DTQYLALFS +LHRMRFS
Subjt:  MVMTQYGIKYAVYIITEHFGNLVAKVCETLLRRGPLTLRLLVRFTELSSSQVNNCLLILIQHNCVQAFTAVTEGEFGAAPKSDTQYLALFSYILHRMRFS

Query:  KFMAIALEKLEKDEACEKLLEGLLQNGRLSMEQIIERADSFKHEGNHSIPDVVR----KLLTARFIERCPAPEPTLSPEVEEQAPPRKRGAKAAKVFKVP
        KF+AIA EKL KD+ CE+LLEGLLQNGRLSMEQ++ERA S KH GN  IPD+V     KLL A F+ERCPAPEP+LSP+VEEQ PP+KRGAKAAK+ +VP
Subjt:  KFMAIALEKLEKDEACEKLLEGLLQNGRLSMEQIIERADSFKHEGNHSIPDVVR----KLLTARFIERCPAPEPTLSPEVEEQAPPRKRGAKAAKVFKVP

Query:  VTLEQRVVESARPVEVIRFSIDETNTDPEKGEHNSPVSGQKRKHGDLEMMVQESGDADAIIILRANFDEFMRCLRHKACIEHVKSQFDDGVVTVLSAILE
         TLEQRVVESARP+EV+RFS+ +TNT+ EK EH S +SGQKRKH DLE MVQ+SGDAD++I+ RANFDEF+RCLRHKACIEHV+SQFDDGVV VLSAILE
Subjt:  VTLEQRVVESARPVEVIRFSIDETNTDPEKGEHNSPVSGQKRKHGDLEMMVQESGDADAIIILRANFDEFMRCLRHKACIEHVKSQFDDGVVTVLSAILE

Query:  ATRSSEKSVKTDITVPLSVDSIYEEATKTEVGRSMTLDRVEASLSALGCSGTEDYKINLQKIIEQAQIDEVESVVLKRYGRDAYRMFRFLSKTGGLVETE
        ATRSSEK VKT+ITVPLS+D+IYEE  K EVGRSMTLDRVEASLS+LGC G +DY+INL+KIIEQAQIDEVES+VLKRYGRDAYRMFRFLSKTGGLVETE
Subjt:  ATRSSEKSVKTDITVPLSVDSIYEEATKTEVGRSMTLDRVEASLSALGCSGTEDYKINLQKIIEQAQIDEVESVVLKRYGRDAYRMFRFLSKTGGLVETE

Query:  KISDSAFVDKNEAPKILYKMWKDEYLHMEKVTITVPRYSLCLLWRVDRFNVWEHVLDEMYHASLNLHLRLAYEVEQNKEVRSIPRAKLSGALEKQHSHWR
        KISDS+FVDKNEAPKILY++WKDEYL+MEKV +TVPR+SLCLLWRVDR+N+WEHVLDEMYHASLNL LR AYE+E+NKE+ S+P    +  L K+    +
Subjt:  KISDSAFVDKNEAPKILYKMWKDEYLHMEKVTITVPRYSLCLLWRVDRFNVWEHVLDEMYHASLNLHLRLAYEVEQNKEVRSIPRAKLSGALEKQHSHWR

Query:  KVGILLWSSLLKLDDALMLFHDF
        KV  LL SSLLKLDDALMLFHDF
Subjt:  KVGILLWSSLLKLDDALMLFHDF

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LBF3 DNA-directed RNA polymerase III subunit RPC3

2.5e-223

76.67

Show/hide

Query:  MVMTQYGIKYAVYIITEHFGNLVAKVCETLLRRGPLTLRLLVRFTELSSSQVNNCLLILIQHNCVQAFTAVTEGEFGAAPKSDTQYLALFSYILHRMRFS
        MVMTQYGIKYAV+I+T HFGNLVAKVCETLLR+GPLTLRLL+RFTEL+ SQVNN LLILIQHNCVQAFT VTEGEFG APK DT YLALFS ILHRMRFS
Subjt:  MVMTQYGIKYAVYIITEHFGNLVAKVCETLLRRGPLTLRLLVRFTELSSSQVNNCLLILIQHNCVQAFTAVTEGEFGAAPKSDTQYLALFSYILHRMRFS

Query:  KFMAIALEKLEKDEACEKLLEGLLQNGRLSMEQIIERADSFKHEGNHSIPDVVR----KLLTARFIERCPAPEPTLSPEVEEQAPPRKRGAKAAKVFKVP
        KF+AIA +KL +D+ C++LLEGLLQNGRLSMEQ++ERA+S    GNH I DVV     KLL A F+ERCPAPEPTLSP+VEE  PPRKRGAKAAK+ +VP
Subjt:  KFMAIALEKLEKDEACEKLLEGLLQNGRLSMEQIIERADSFKHEGNHSIPDVVR----KLLTARFIERCPAPEPTLSPEVEEQAPPRKRGAKAAKVFKVP

Query:  VTLEQRVVESARPVEVIRFSIDETNTDPEKGEHNSPVSGQKRKHGDLEMMVQESGDADAIIILRANFDEFMRCLRHKACIEHVKSQFDDGVVTVLSAILE
         TLEQR++E+ARPVEV+RFS+ +TN + EK EH+S +SGQKRKH DLE + Q+SGDAD  I+ RAN+DEF+RCLRHKACIEHV+SQFDDGVV VLSAILE
Subjt:  VTLEQRVVESARPVEVIRFSIDETNTDPEKGEHNSPVSGQKRKHGDLEMMVQESGDADAIIILRANFDEFMRCLRHKACIEHVKSQFDDGVVTVLSAILE

Query:  ATRSSEKSVKTDITVPLSVDSIYEEATKTEVGRSMTLDRVEASLSALGCSGTEDYKINLQKIIEQAQIDEVESVVLKRYGRDAYRMFRFLSKTGGLVETE
        ATRSSEK VKT+ITVPLS+D+IYEE  K EVGRSMTLDRVEASL+ALGC G +DYKINL++IIEQAQ DEVES+VLKRYGRDAYRMFRFLSKTGGLVETE
Subjt:  ATRSSEKSVKTDITVPLSVDSIYEEATKTEVGRSMTLDRVEASLSALGCSGTEDYKINLQKIIEQAQIDEVESVVLKRYGRDAYRMFRFLSKTGGLVETE

Query:  KISDSAFVDKNEAPKILYKMWKDEYLHMEKVTITVPRYSLCLLWRVDRFNVWEHVLDEMYHASLNLHLRLAYEVEQNKEVRSIPRAKLSGALEKQHSHWR
        KISDS+FVDKNEAPKILY++WKDEYL+MEKV +TVPR+SLCLLWRVDR+N+WEHVLDEMYHASLNL LRLA+E+E+NKE+ S+P+   +  L K+  H+ 
Subjt:  KISDSAFVDKNEAPKILYKMWKDEYLHMEKVTITVPRYSLCLLWRVDRFNVWEHVLDEMYHASLNLHLRLAYEVEQNKEVRSIPRAKLSGALEKQHSHWR

Query:  KVGILLWSSLLKLDDALMLFHDF
         V  LL SSL+KLDDALMLFHDF
Subjt:  KVGILLWSSLLKLDDALMLFHDF

A0A1S3AYY3 DNA-directed RNA polymerase III subunit RPC3

9.1e-226

76.67

Show/hide

Query:  MVMTQYGIKYAVYIITEHFGNLVAKVCETLLRRGPLTLRLLVRFTELSSSQVNNCLLILIQHNCVQAFTAVTEGEFGAAPKSDTQYLALFSYILHRMRFS
        MVMTQYGIKYAV+I+T HFGNLVAKVCETLLR+GPLTLRLL+RFTEL+ SQVNN LLILIQHNCVQAFT VTEGEFG APK DTQYLALFS ILHRMRFS
Subjt:  MVMTQYGIKYAVYIITEHFGNLVAKVCETLLRRGPLTLRLLVRFTELSSSQVNNCLLILIQHNCVQAFTAVTEGEFGAAPKSDTQYLALFSYILHRMRFS

Query:  KFMAIALEKLEKDEACEKLLEGLLQNGRLSMEQIIERADSFKHEGNHSIPDVVR----KLLTARFIERCPAPEPTLSPEVEEQAPPRKRGAKAAKVFKVP
        KF+AIA +KL +D+ C++LLEGLLQNGRLSMEQ++ERA+S    GN  IPDVV     KLL A F+ERCPAPEPTLSP+VEEQ PPRKRGAKAAK+F+VP
Subjt:  KFMAIALEKLEKDEACEKLLEGLLQNGRLSMEQIIERADSFKHEGNHSIPDVVR----KLLTARFIERCPAPEPTLSPEVEEQAPPRKRGAKAAKVFKVP

Query:  VTLEQRVVESARPVEVIRFSIDETNTDPEKGEHNSPVSGQKRKHGDLEMMVQESGDADAIIILRANFDEFMRCLRHKACIEHVKSQFDDGVVTVLSAILE
         TLEQR++E+ARPVEV+RFS+ +TN + EK EH S +SGQKRKH +LE + Q+SG AD  I+ RAN+DEF+RCLRHKAC+EHV+SQFDDGVV VLSA LE
Subjt:  VTLEQRVVESARPVEVIRFSIDETNTDPEKGEHNSPVSGQKRKHGDLEMMVQESGDADAIIILRANFDEFMRCLRHKACIEHVKSQFDDGVVTVLSAILE

Query:  ATRSSEKSVKTDITVPLSVDSIYEEATKTEVGRSMTLDRVEASLSALGCSGTEDYKINLQKIIEQAQIDEVESVVLKRYGRDAYRMFRFLSKTGGLVETE
        ATRSSEK VKT+ITVPLS+D+IYEE  K EVGRSMTLDRVEASL+ALGC G +DYKINL++I+EQAQ DEVES+VLKRYGRDAYRMFRFLSKTGGLVETE
Subjt:  ATRSSEKSVKTDITVPLSVDSIYEEATKTEVGRSMTLDRVEASLSALGCSGTEDYKINLQKIIEQAQIDEVESVVLKRYGRDAYRMFRFLSKTGGLVETE

Query:  KISDSAFVDKNEAPKILYKMWKDEYLHMEKVTITVPRYSLCLLWRVDRFNVWEHVLDEMYHASLNLHLRLAYEVEQNKEVRSIPRAKLSGALEKQHSHWR
        KISDS+FVDKNEAPKILY++WKDEYL+MEKV ITVPR+SLCLLWRVDR+N+WEHVLDEMYHASLNL LRLA+E+E+NKE+ S+P+   +  L K+  H+ 
Subjt:  KISDSAFVDKNEAPKILYKMWKDEYLHMEKVTITVPRYSLCLLWRVDRFNVWEHVLDEMYHASLNLHLRLAYEVEQNKEVRSIPRAKLSGALEKQHSHWR

Query:  KVGILLWSSLLKLDDALMLFHDF
        KV  LL SSL+KLDDALMLFHDF
Subjt:  KVGILLWSSLLKLDDALMLFHDF

A0A6J1CHB3 DNA-directed RNA polymerase III subunit RPC3

5.7e-228

78.78

Show/hide

Query:  MVMTQYGIKYAVYIITEHFGNLVAKVCETLLRRGPLTLRLLVRFTELSSSQVNNCLLILIQHNCVQAFTAVTEGEFGAAPKSDTQYLALFSYILHRMRFS
        M  TQ GIKYAV+IIT HFGNLVAKVCETLLR+GPLTLRLL+RFTEL+SSQVNN LLILIQHNCVQAFT+VTEGEFG APK+DTQYLALFS ILHRMRFS
Subjt:  MVMTQYGIKYAVYIITEHFGNLVAKVCETLLRRGPLTLRLLVRFTELSSSQVNNCLLILIQHNCVQAFTAVTEGEFGAAPKSDTQYLALFSYILHRMRFS

Query:  KFMAIALEKLEKDEACEKLLEGLLQNGRLSMEQIIERADSFKHEGNHSIPDVVR----KLLTARFIERCPAPEPTLSPEVEEQAPPRKRGAKAAKVFKVP
        KF+A+A EKLEKD+ CE+LLEGLLQNGRLSMEQ++ERA S KH GN  IPDVV     KLLTA F+ERCPAPEP LS +VEEQ PP+KRGAKAAK+ +VP
Subjt:  KFMAIALEKLEKDEACEKLLEGLLQNGRLSMEQIIERADSFKHEGNHSIPDVVR----KLLTARFIERCPAPEPTLSPEVEEQAPPRKRGAKAAKVFKVP

Query:  VTLEQRVVESARPVEVIRFSIDETNTDPEKGEHNSPVSGQKRKHGDLEMMVQESGDADAIIILRANFDEFMRCLRHKACIEHVKSQFDDGVVTVLSAILE
         TLEQR+V  ARP+EV+RFS+ ETNT+ EK E   P+SGQKRKH +LE  VQESGDAD II+ RANFDEF+RCLRHKACIEHV+SQFDDGVV VLSAILE
Subjt:  VTLEQRVVESARPVEVIRFSIDETNTDPEKGEHNSPVSGQKRKHGDLEMMVQESGDADAIIILRANFDEFMRCLRHKACIEHVKSQFDDGVVTVLSAILE

Query:  ATRSSEKSVKTDITVPLSVDSIYEEATKTEVGRSMTLDRVEASLSALGCSGTEDYKINLQKIIEQAQIDEVESVVLKRYGRDAYRMFRFLSKTGGLVETE
        ATRSSEK+VKT+ITVPLS+D+IYEE  K EVGRSMTLDRVEASLSALGC G +DYKINL+KIIEQAQI+EVES+VLKRYGRDAYRMFRFLS+TGGLVETE
Subjt:  ATRSSEKSVKTDITVPLSVDSIYEEATKTEVGRSMTLDRVEASLSALGCSGTEDYKINLQKIIEQAQIDEVESVVLKRYGRDAYRMFRFLSKTGGLVETE

Query:  KISDSAFVDKNEAPKILYKMWKDEYLHMEKVTITVPRYSLCLLWRVDRFNVWEHVLDEMYHASLNLHLRLAYEVEQNKEVRSIPRAKLSGALEKQHSHWR
        KISDS+FVDKNEAPKILY++WKDEYL+MEKV +T PR+SLCLLWRVD++N+WEHVLDEMYHASLNL LR AYE+EQ+KE+ S+P  K  G LEK+++  R
Subjt:  KISDSAFVDKNEAPKILYKMWKDEYLHMEKVTITVPRYSLCLLWRVDRFNVWEHVLDEMYHASLNLHLRLAYEVEQNKEVRSIPRAKLSGALEKQHSHWR

Query:  KVGILLWSSLLKLDDALMLFHDF
         V ILL SSLLKLDDALMLFHDF
Subjt:  KVGILLWSSLLKLDDALMLFHDF

A0A6J1G256 DNA-directed RNA polymerase III subunit RPC3

4.2e-239

82.79

Show/hide

Query:  MVMTQYGIKYAVYIITEHFGNLVAKVCETLLRRGPLTLRLLVRFTELSSSQVNNCLLILIQHNCVQAFTAVTEGEFGAAPKSDTQYLALFSYILHRMRFS
        M  TQYGIKYAV+IIT HFGNLVAKVCETLLRRGPLTLRLLVRFTELSSSQ+NN LLILIQHNCVQAFTAVTEGEFG APK+DTQYLALFS ILHRMRFS
Subjt:  MVMTQYGIKYAVYIITEHFGNLVAKVCETLLRRGPLTLRLLVRFTELSSSQVNNCLLILIQHNCVQAFTAVTEGEFGAAPKSDTQYLALFSYILHRMRFS

Query:  KFMAIALEKLEKDEACEKLLEGLLQNGRLSMEQIIERADSFKHEGNHSIPDVVR----KLLTARFIERCPAPEPTLSPEVEEQAPPRKRGAKAAKVFKVP
        KF+AIA EKLEKD+ CE+LLEGLLQNGRLSMEQIIERA S KH GN  IPDVV     KLL A F+ERCPAPEPTLSP+VEEQ PPRKRGAKAAKV +VP
Subjt:  KFMAIALEKLEKDEACEKLLEGLLQNGRLSMEQIIERADSFKHEGNHSIPDVVR----KLLTARFIERCPAPEPTLSPEVEEQAPPRKRGAKAAKVFKVP

Query:  VTLEQRVVESARPVEVIRFSIDETNTDPEKGEHNSPVSGQKRKHGDLEMMVQESGDADAIIILRANFDEFMRCLRHKACIEHVKSQFDDGVVTVLSAILE
         TLEQR+VESARP+EVIRFSI ETNT+ E+ EH S +SGQKRK GDL+ M+QESGDAD II+ RANFDEF+RCLRHKACIEHV+SQFDDG V VLSAILE
Subjt:  VTLEQRVVESARPVEVIRFSIDETNTDPEKGEHNSPVSGQKRKHGDLEMMVQESGDADAIIILRANFDEFMRCLRHKACIEHVKSQFDDGVVTVLSAILE

Query:  ATRSSEKSVKTDITVPLSVDSIYEEATKTEVGRSMTLDRVEASLSALGCSGTEDYKINLQKIIEQAQIDEVESVVLKRYGRDAYRMFRFLSKTGGLVETE
        ATRSSEK VKT+ITVPLS+D+IYEE  K EVGRSMTLDRVEASLSALGCSG EDYKINLQKIIEQAQIDEVES+VLKRYGRDAYRMFRFLSKTGGLVETE
Subjt:  ATRSSEKSVKTDITVPLSVDSIYEEATKTEVGRSMTLDRVEASLSALGCSGTEDYKINLQKIIEQAQIDEVESVVLKRYGRDAYRMFRFLSKTGGLVETE

Query:  KISDSAFVDKNEAPKILYKMWKDEYLHMEKVTITVPRYSLCLLWRVDRFNVWEHVLDEMYHASLNLHLRLAYEVEQNKEVRSIPRAKLSGALEKQHSHWR
        KISDSAFVDKNEAPKILY++WKDEYL+MEKV ITVPR+SLCLLWRVDR+N+WEHVLDEMYHASLNL LR AYE+EQ+KE+ ++P  K  G LEK+++  R
Subjt:  KISDSAFVDKNEAPKILYKMWKDEYLHMEKVTITVPRYSLCLLWRVDRFNVWEHVLDEMYHASLNLHLRLAYEVEQNKEVRSIPRAKLSGALEKQHSHWR

Query:  KVGILLWSSLLKLDDALMLFHDF
         V ILL SSLLKLDDALMLFHDF
Subjt:  KVGILLWSSLLKLDDALMLFHDF

A0A6J1HUV1 DNA-directed RNA polymerase III subunit RPC3

4.2e-239

82.6

Show/hide

Query:  MVMTQYGIKYAVYIITEHFGNLVAKVCETLLRRGPLTLRLLVRFTELSSSQVNNCLLILIQHNCVQAFTAVTEGEFGAAPKSDTQYLALFSYILHRMRFS
        M  TQYGIKYAV+IIT HFGNLVAKVCETLLRRGPLTLRLL+RFTELSSSQ+NN LLILIQHNCVQAFTAVTEGEFG APK+DTQYLALFS ILHRMRFS
Subjt:  MVMTQYGIKYAVYIITEHFGNLVAKVCETLLRRGPLTLRLLVRFTELSSSQVNNCLLILIQHNCVQAFTAVTEGEFGAAPKSDTQYLALFSYILHRMRFS

Query:  KFMAIALEKLEKDEACEKLLEGLLQNGRLSMEQIIERADSFKHEGNHSIPDVVR----KLLTARFIERCPAPEPTLSPEVEEQAPPRKRGAKAAKVFKVP
        KF+AIA EKLEKD+ CE+LLEGLLQNGRLSMEQIIERA S KH GN  IPDVV     KLL A F+ERCPAPEPTLSP+VEEQ PPRKRGAKAAKV +VP
Subjt:  KFMAIALEKLEKDEACEKLLEGLLQNGRLSMEQIIERADSFKHEGNHSIPDVVR----KLLTARFIERCPAPEPTLSPEVEEQAPPRKRGAKAAKVFKVP

Query:  VTLEQRVVESARPVEVIRFSIDETNTDPEKGEHNSPVSGQKRKHGDLEMMVQESGDADAIIILRANFDEFMRCLRHKACIEHVKSQFDDGVVTVLSAILE
         TLEQR+VESARP+EVIRFSI ETNT+ E+ EH S +SGQKRK GDL+ M+QESGDAD II+ RANFDEF+RCLRHKACIEHV+SQFDDG V VLSAILE
Subjt:  VTLEQRVVESARPVEVIRFSIDETNTDPEKGEHNSPVSGQKRKHGDLEMMVQESGDADAIIILRANFDEFMRCLRHKACIEHVKSQFDDGVVTVLSAILE

Query:  ATRSSEKSVKTDITVPLSVDSIYEEATKTEVGRSMTLDRVEASLSALGCSGTEDYKINLQKIIEQAQIDEVESVVLKRYGRDAYRMFRFLSKTGGLVETE
        ATRSSEK VKT+ITVPLS+++IYEE  K EVGRSMTLDRVEASLSALGCSG EDYKINLQKIIEQAQIDEVES+VLKRYGRDAYRMFRFLSKTGGLVETE
Subjt:  ATRSSEKSVKTDITVPLSVDSIYEEATKTEVGRSMTLDRVEASLSALGCSGTEDYKINLQKIIEQAQIDEVESVVLKRYGRDAYRMFRFLSKTGGLVETE

Query:  KISDSAFVDKNEAPKILYKMWKDEYLHMEKVTITVPRYSLCLLWRVDRFNVWEHVLDEMYHASLNLHLRLAYEVEQNKEVRSIPRAKLSGALEKQHSHWR
        KISDSAFVDKNEAPKILY++WKDEYL+MEKV ITVPRYSLCLLWRVDR+N+WEHVLDEMYHASLNL LR AYE+EQ+KE+ ++P  K  G LEK+++  R
Subjt:  KISDSAFVDKNEAPKILYKMWKDEYLHMEKVTITVPRYSLCLLWRVDRFNVWEHVLDEMYHASLNLHLRLAYEVEQNKEVRSIPRAKLSGALEKQHSHWR

Query:  KVGILLWSSLLKLDDALMLFHDF
         V ILL SSLLKLDDALMLFHDF
Subjt:  KVGILLWSSLLKLDDALMLFHDF

SwissProt top hits

e value

%identity

Alignment

Q2TBL4 DNA-directed RNA polymerase III subunit RPC3

2.1e-22

23.94

Show/hide

Query:  MTQYGIKYAVYIITEHFGNLVAKVCETLLRRGPLTLRLLVRFTELSSSQVNNCLLILIQHNCVQAFTAVTEGEFGAAPKSDTQYLALFSYILHRMRFSKF
        MTQ  IK    ++ EHFG +V K+   L+R G   LR++   T  S  QV   L +LIQHN V          +    +   +Y A  + +L  +R+ ++
Subjt:  MTQYGIKYAVYIITEHFGNLVAKVCETLLRRGPLTLRLLVRFTELSSSQVNNCLLILIQHNCVQAFTAVTEGEFGAAPKSDTQYLALFSYILHRMRFSKF

Query:  MAIALEKLEKDEACEKLLEGLLQNGRLSMEQII--------ERADSFKHEGNHSIPDVVRKLLTARFIERCPAPEPTLSPEVEEQAPPRKRGAKAAKVFK
        +  A  K    +  E ++E LL NG+++M  ++        E  +  K      + +   +L+   F++RCP    T + +     P          ++ 
Subjt:  MAIALEKLEKDEACEKLLEGLLQNGRLSMEQII--------ERADSFKHEGNHSIPDVVRKLLTARFIERCPAPEPTLSPEVEEQAPPRKRGAKAAKVFK

Query:  VPVTLEQRVVESARPVEVIRFSIDETNTDPEKGEHNSPVSGQKRKHGDLEMMVQESGDADAIIILRANFDEFMRCLRHKACIEHVKSQFDDGVVTVLSAI
        VP   +  ++   +     R S DE  T   K +     +  K         + + G     I  +AN D F +  R +A +  V ++ D     ++  +
Subjt:  VPVTLEQRVVESARPVEVIRFSIDETNTDPEKGEHNSPVSGQKRKHGDLEMMVQESGDADAIIILRANFDEFMRCLRHKACIEHVKSQFDDGVVTVLSAI

Query:  LEATRSSEKSVKTDITVPLSVDSIYE------EATKTEVGRSMTL--DRVEASLSALGCSGTEDYKINLQKIIEQAQIDEVESVVLKRYGRDAYRMFRFL
        L  +  +  S     T PLS + I+         +K  + + +TL  D     +   G SG   Y INL K +       +ESVV +R+G    R+FR +
Subjt:  LEATRSSEKSVKTDITVPLSVDSIYE------EATKTEVGRSMTL--DRVEASLSALGCSGTEDYKINLQKIIEQAQIDEVESVVLKRYGRDAYRMFRFL

Query:  SKTGGLVETEKISDSAFVDKNEAPKILYKMWKDEYLHMEKVTITVPRYS---LCLLWRVDRFNVWEHVLDEMYHASLNLHLRLAYEVEQNKEV
         +   L E +++ D A +   EA  +LYKM  + ++ ++++  T P ++      L+ V+  +    +L   Y +  NL  R  +E ++NK +
Subjt:  SKTGGLVETEKISDSAFVDKNEAPKILYKMWKDEYLHMEKVTITVPRYS---LCLLWRVDRFNVWEHVLDEMYHASLNLHLRLAYEVEQNKEV

Q55FJ5 DNA-directed RNA polymerase III subunit rpc3

1.5e-15

19.91

Show/hide

Query:  YGIKYAVYIITEHFGNLVAKVCETLLRRGPLTLRLLVRFTE----LSSSQVNNCLLILIQHNCV---QAFTAVTEGEF-----GAAPKSDTQYLALFSYI
        Y  K A+ I+ E FG+ V KV E L++RG  + +++ +       L+  ++  CLL+LIQHN V   +    +T+ E      G    SD+ Y A+    
Subjt:  YGIKYAVYIITEHFGNLVAKVCETLLRRGPLTLRLLVRFTE----LSSSQVNNCLLILIQHNCV---QAFTAVTEGEF-----GAAPKSDTQYLALFSYI

Query:  LHRMRFSKFMAIALEKLEKDEACEKLLEGLLQNGRLSMEQI------IERADSFKHEGN--HSIPDVVRKLLTARFIERCPAPEPTLSPEVEE--QAPPR
        +HR+RF KF  I   K  K +    +LE L+ +GRL M+ +      I+R D+F+ + +      D   KL+  +FI R P P P    E         +
Subjt:  LHRMRFSKFMAIALEKLEKDEACEKLLEGLLQNGRLSMEQI------IERADSFKHEGN--HSIPDVVRKLLTARFIERCPAPEPTLSPEVEE--QAPPR

Query:  KRGAKAAKVFKV----------------------PVTLEQRVVESARPVEVI--------------RFSIDETNTDPEKGEHNSPVS---GQKRKHGDL-
        K G   A    V                      P++        A  +E++              + +  +T+  P+    N+  +   G+KRK  D+ 
Subjt:  KRGAKAAKVFKV----------------------PVTLEQRVVESARPVEVI--------------RFSIDETNTDPEKGEHNSPVS---GQKRKHGDL-

Query:  -----------------EMMVQESGDA--------------------------------------------------DAIIILRANFDEFMRCLRHKACI
                         E+ V +   A                                                  ++ ++   N+++F+   + KAC 
Subjt:  -----------------EMMVQESGDA--------------------------------------------------DAIIILRANFDEFMRCLRHKACI

Query:  EHVKSQFDDGVVTVLSAILEATRSSEKSVKTDITVPLSVDSIYEEATK-TEVGRSMTLDRVEASLSALGCSGTE------------------DYKINLQK
        + V  + +     + +A+++  + S +S +  +T  +  ++I EE  +  +  + M   ++E  LS +  S                      Y++N+  
Subjt:  EHVKSQFDDGVVTVLSAILEATRSSEKSVKTDITVPLSVDSIYEEATK-TEVGRSMTLDRVEASLSALGCSGTE------------------DYKINLQK

Query:  IIEQAQIDEVESVVLKRYGRDAYRMFRFLSKTGGLVETEKISDSAFVDKNEAPKILYKMWKDEYLHMEKVTITVPRYS--LCLLWRVDRFNVWEHVLDEM
        II   +   VES++ +++G +  R+F+ L     L+E ++I++ A +  NE   +L+ M +   + ++++  +   ++     L+ VD   +     +++
Subjt:  IIEQAQIDEVESVVLKRYGRDAYRMFRFLSKTGGLVETEKISDSAFVDKNEAPKILYKMWKDEYLHMEKVTITVPRYS--LCLLWRVDRFNVWEHVLDEM

Query:  YHASLNLHLRLAYEVEQNKE----VRSIPRAKLSGALEKQHSHWRKVGILLWSSLLKLDDALMLFHDF
        + A  N   RL  E+E +K+    +  +   +++    K +    ++   L + +L LD+ L+  + F
Subjt:  YHASLNLHLRLAYEVEQNKE----VRSIPRAKLSGALEKQHSHWRKVGILLWSSLLKLDDALMLFHDF

Q5XIL3 DNA-directed RNA polymerase III subunit RPC3

6.9e-21

23.94

Show/hide

Query:  MTQYGIKYAVYIITEHFGNLVAKVCETLLRRGPLTLRLLVRFTELSSSQVNNCLLILIQHNCVQAFTAVTEGEFGAAPKSDTQYLALFSYILHRMRFSKF
        MTQ  IK    ++ EHFG +V K+   L+R G   LR++   T+ S  QV   L +LI HN V          +    +   +Y A  S +L  +R+ ++
Subjt:  MTQYGIKYAVYIITEHFGNLVAKVCETLLRRGPLTLRLLVRFTELSSSQVNNCLLILIQHNCVQAFTAVTEGEFGAAPKSDTQYLALFSYILHRMRFSKF

Query:  MAIALEKLEKDEACEKLLEGLLQNGRLSMEQII--------ERADSFKHEGNHSIPDVVRKLLTARFIERCPAPEPTLSPEVEEQAPPRKRGAKAAKVFK
          I   K    +  E ++E LL NG+++M  ++        E  +  K      + +   +L    F++RCP    T S +     P          ++ 
Subjt:  MAIALEKLEKDEACEKLLEGLLQNGRLSMEQII--------ERADSFKHEGNHSIPDVVRKLLTARFIERCPAPEPTLSPEVEEQAPPRKRGAKAAKVFK

Query:  VPVTLEQRVVESARPVEVIRFSIDETNTDPEKGEHNSPVSGQKRKHGDLEMMVQESGDADAIIILRANFDEFMRCLRHKACIEHVKSQFDDGVVTVLSAI
        VP   +  ++   +     R S DE      K         +K +  D E    + G     I  + N D F +  R +A +  V ++ D     ++  +
Subjt:  VPVTLEQRVVESARPVEVIRFSIDETNTDPEKGEHNSPVSGQKRKHGDLEMMVQESGDADAIIILRANFDEFMRCLRHKACIEHVKSQFDDGVVTVLSAI

Query:  LEATRSSEKSVKTDITVPLSVDSIYE------EATKTEVGRSMTL--DRVEASLSALGCSGTEDYKINLQKIIEQAQIDEVESVVLKRYGRDAYRMFRFL
        L  +  +  S     T PLS + I+         +K  + + +TL  D     +   G SG   Y INL K +       +ESV+ +R+G    R+FR +
Subjt:  LEATRSSEKSVKTDITVPLSVDSIYE------EATKTEVGRSMTL--DRVEASLSALGCSGTEDYKINLQKIIEQAQIDEVESVVLKRYGRDAYRMFRFL

Query:  SKTGGLVETEKISDSAFVDKNEAPKILYKMWKDEYLHMEKVTITVPRYS---LCLLWRVDRFNVWEHVLDEMYHASLNLHLRLAYEVEQNKEV
         +   L E +++ D A +   EA  +LYKM  + ++ ++++  T P ++      L+ V+  +    +L   Y +  NL  R  +E ++NK +
Subjt:  SKTGGLVETEKISDSAFVDKNEAPKILYKMWKDEYLHMEKVTITVPRYS---LCLLWRVDRFNVWEHVLDEMYHASLNLHLRLAYEVEQNKEV

Q9BUI4 DNA-directed RNA polymerase III subunit RPC3

6.2e-22

23.73

Show/hide

Query:  MTQYGIKYAVYIITEHFGNLVAKVCETLLRRGPLTLRLLVRFTELSSSQVNNCLLILIQHNCVQAFTAVTEGEFGAAPKSDTQYLALFSYILHRMRFSKF
        MTQ  IK    ++ EHFG +V K+   L+R G   LR++   T  S  QV   L +L+QHN V          +    +   +Y A  S +L  +R+ ++
Subjt:  MTQYGIKYAVYIITEHFGNLVAKVCETLLRRGPLTLRLLVRFTELSSSQVNNCLLILIQHNCVQAFTAVTEGEFGAAPKSDTQYLALFSYILHRMRFSKF

Query:  MAIALEKLEKDEACEKLLEGLLQNGRLSMEQII--------ERADSFKHEGNHSIPDVVRKLLTARFIERCPAPEPTLSPEVEEQAPPRKRGAKAAKVFK
          I   K    +  E ++E LL NG+L+M  ++        E  +  K      + +   +L    F++RCP+   T + +     P          ++ 
Subjt:  MAIALEKLEKDEACEKLLEGLLQNGRLSMEQII--------ERADSFKHEGNHSIPDVVRKLLTARFIERCPAPEPTLSPEVEEQAPPRKRGAKAAKVFK

Query:  VPVTLEQRVVESARPVEVIRFSIDETNTDPEKGEHNSPVSGQKRKHGDLEMMVQESGDADAIIILRANFDEFMRCLRHKACIEHVKSQFDDGVVTVLSAI
        VP   +  ++   +     R S DE      K +     +  K         + + G     I  +AN D F +  R +A +  V ++ D     ++  +
Subjt:  VPVTLEQRVVESARPVEVIRFSIDETNTDPEKGEHNSPVSGQKRKHGDLEMMVQESGDADAIIILRANFDEFMRCLRHKACIEHVKSQFDDGVVTVLSAI

Query:  LEATRSSEKSVKTDITVPLSVDSIYE------EATKTEVGRSMTL--DRVEASLSALGCSGTEDYKINLQKIIEQAQIDEVESVVLKRYGRDAYRMFRFL
        L  +  +  S     T PLS + I+         +K  + + +TL  D     +   G SG   Y INL K +       +ESVV +R+G    R+FR +
Subjt:  LEATRSSEKSVKTDITVPLSVDSIYE------EATKTEVGRSMTL--DRVEASLSALGCSGTEDYKINLQKIIEQAQIDEVESVVLKRYGRDAYRMFRFL

Query:  SKTGGLVETEKISDSAFVDKNEAPKILYKMWKDEYLHMEKVTITVPRYS---LCLLWRVDRFNVWEHVLDEMYHASLNLHLRLAYEVEQNKEV
         +    +E +++ D A +   EA  +LYKM  + ++ ++++  T P ++      L+ V+  +    +L   Y +  NL  R  +E ++NK +
Subjt:  SKTGGLVETEKISDSAFVDKNEAPKILYKMWKDEYLHMEKVTITVPRYS---LCLLWRVDRFNVWEHVLDEMYHASLNLHLRLAYEVEQNKEV

Q9D483 DNA-directed RNA polymerase III subunit RPC3

2.6e-20

23.73

Show/hide

Query:  MTQYGIKYAVYIITEHFGNLVAKVCETLLRRGPLTLRLLVRFTELSSSQVNNCLLILIQHNCVQAFTAVTEGEFGAAPKSDTQYLALFSYILHRMRFSKF
        MTQ  IK    ++ EHFG +V K+   L+R G   LR++   T+ S  QV   L +LI HN V          +    +   +Y A  S +L  +R+ ++
Subjt:  MTQYGIKYAVYIITEHFGNLVAKVCETLLRRGPLTLRLLVRFTELSSSQVNNCLLILIQHNCVQAFTAVTEGEFGAAPKSDTQYLALFSYILHRMRFSKF

Query:  MAIALEKLEKDEACEKLLEGLLQNGRLSMEQII--------ERADSFKHEGNHSIPDVVRKLLTARFIERCPAPEPTLSPEVEEQAPPRKRGAKAAKVFK
          I   K    +  E ++E LL NG+++M  ++        E  +  K      + +   +L    F++RCP    T S +     P          ++ 
Subjt:  MAIALEKLEKDEACEKLLEGLLQNGRLSMEQII--------ERADSFKHEGNHSIPDVVRKLLTARFIERCPAPEPTLSPEVEEQAPPRKRGAKAAKVFK

Query:  VPVTLEQRVVESARPVEVIRFSIDETNTDPEKGEHNSPVSGQKRKHGDLEMMVQESGDADAIIILRANFDEFMRCLRHKACIEHVKSQFDDGVVTVLSAI
        VP   +  ++   +     R S DE  T   K         +K ++ D +    + G     I  + N D F +  R +A +  V ++ D     ++  +
Subjt:  VPVTLEQRVVESARPVEVIRFSIDETNTDPEKGEHNSPVSGQKRKHGDLEMMVQESGDADAIIILRANFDEFMRCLRHKACIEHVKSQFDDGVVTVLSAI

Query:  LEATRSSEKSVKTDITVPLSVDSIYE------EATKTEVGRSMTL--DRVEASLSALGCSGTEDYKINLQKIIEQAQIDEVESVVLKRYGRDAYRMFRFL
        L  +  +  S     T PLS + I+         +K  + + +TL  D     +   G SG   + INL K +       +ESV+ +R+G    R+FR +
Subjt:  LEATRSSEKSVKTDITVPLSVDSIYE------EATKTEVGRSMTL--DRVEASLSALGCSGTEDYKINLQKIIEQAQIDEVESVVLKRYGRDAYRMFRFL

Query:  SKTGGLVETEKISDSAFVDKNEAPKILYKMWKDEYLHMEKVTITVPRYS---LCLLWRVDRFNVWEHVLDEMYHASLNLHLRLAYEVEQNKEV
         +   L E +++ D A +   EA  +LYKM  + ++ ++++  T P ++      L+ V+  +    +L   Y +  NL  R  +E ++NK +
Subjt:  SKTGGLVETEKISDSAFVDKNEAPKILYKMWKDEYLHMEKVTITVPRYS---LCLLWRVDRFNVWEHVLDEMYHASLNLHLRLAYEVEQNKEV

Arabidopsis top hits

e value

%identity

Alignment

AT3G49000.1 RNA polymerase III subunit RPC82 family protein

1.2e-126

47.57

Show/hide

Query:  MVMTQYGIKYAVYIITEHFGNLVAKVCETLLRRGPLTLRLLVRFTE--LSSSQVNNCLLILIQHNCVQAFTAVTEGEFGAAPKSDTQYLALFSYILHRMR
        M M+++GI YA++IIT  FG++V+KVCE LLR+GPL+ R + R  E  ++ ++V + L +LIQHNCVQAF+   E   G+  K+  QY+ LF+ ILHR+R
Subjt:  MVMTQYGIKYAVYIITEHFGNLVAKVCETLLRRGPLTLRLLVRFTE--LSSSQVNNCLLILIQHNCVQAFTAVTEGEFGAAPKSDTQYLALFSYILHRMR

Query:  FSKFMAIALEKLEKDEACEKLLEGLLQNGRLSMEQIIER-ADSFKHEGNHSIPDVVRKLLTARFIERCPAPEPTLSPEVEEQAPPRKRGAKAAKVFKVPV
        ++KF  I  E+L  D  C  +L+GLL NGRL++ Q IER  DS    G+ +I D ++KL+ ARF+ER P+PEP L    +E+ P ++RGAKAAK+ K P 
Subjt:  FSKFMAIALEKLEKDEACEKLLEGLLQNGRLSMEQIIER-ADSFKHEGNHSIPDVVRKLLTARFIERCPAPEPTLSPEVEEQAPPRKRGAKAAKVFKVPV

Query:  TLEQRVVESARPVEVIRFS-IDETNTDPEKGEHNSPVSGQKRKHGDLEMMVQESGDADAIIILRANFDEFMRCLRHKACIEHVKSQFDDGVVTVLSAILE
        TLE++VVE+A PV+ IRF  I E +++    + NS ++  KRK  D+     ++ D+ + +I R NF+EF+  LRHKAC+E VK + D+G   VL A+LE
Subjt:  TLEQRVVESARPVEVIRFS-IDETNTDPEKGEHNSPVSGQKRKHGDLEMMVQESGDADAIIILRANFDEFMRCLRHKACIEHVKSQFDDGVVTVLSAILE

Query:  ATRSSEKSVKTDITVPLSVDSIYEEATKTEVGRSMTLDRVEASLSALGCSGT----------EDYKINLQKIIEQAQIDEVESVVLKRYGRDAYRMFRFL
          RS EK VKTD + P+SV SIYEE  KTE GR+M  +RVEA L  L  + +          + Y ++ + II  AQ DE+E+VV++RYG++A+RMFR+L
Subjt:  ATRSSEKSVKTDITVPLSVDSIYEEATKTEVGRSMTLDRVEASLSALGCSGT----------EDYKINLQKIIEQAQIDEVESVVLKRYGRDAYRMFRFL

Query:  SKTGGLVETEKISDSAFVDKNEAPKILYKMWKDEYLHMEKVTITVP-RYSLCLLWRVDRFNVWEHVLDEMYHASLNLHLRLAYEVEQNKEVRSIPRAKLS
        S+ G  VET+KI+D+A  +K + P+ L KMWKD YLHM+K+ +T P  Y+  LLW+V++  V   +LDEMYHASLNL LRLA+E+E  KE+  +P  KL 
Subjt:  SKTGGLVETEKISDSAFVDKNEAPKILYKMWKDEYLHMEKVTITVP-RYSLCLLWRVDRFNVWEHVLDEMYHASLNLHLRLAYEVEQNKEVRSIPRAKLS

Query:  GALEKQHSHWRKVGILLWSSLLKLDDALMLFHDF
        G L+++    +   +LL S++ KLDDA+MLFHDF
Subjt:  GALEKQHSHWRKVGILLWSSLLKLDDALMLFHDF

Sequences

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CDS sequence

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ATGGTGATGACACAGTACGGCATCAAATATGCCGTCTACATTATCACTGAGCACTTCGGCAATCTCGTCGCGAAAGTGTGTGAAACCCTGCTCCGAAGGGGCCCTTTGAC
GTTGAGGCTTCTTGTTCGATTTACGGAGCTTAGCTCCTCACAGGTCAACAACTGCCTTCTTATTCTCATCCAACATAATTGCGTCCAAGCCTTCACTGCAGTGACAGAAG
GTGAGTTTGGAGCCGCACCCAAGTCTGACACACAATATTTGGCGTTGTTCAGTTACATACTTCATCGTATGAGGTTTTCCAAATTCATGGCGATTGCATTGGAAAAGCTT
GAGAAAGATGAAGCTTGTGAAAAACTTCTTGAGGGTTTGCTGCAGAATGGTAGGCTTTCAATGGAACAAATAATTGAAAGAGCAGATTCTTTTAAACATGAAGGTAACCA
TTCAATTCCAGATGTTGTACGTAAACTTTTGACTGCCCGTTTTATTGAACGCTGTCCAGCCCCCGAACCAACTCTTTCACCCGAAGTCGAAGAACAGGCGCCTCCAAGAA
AAAGAGGTGCTAAGGCTGCCAAGGTGTTTAAAGTACCAGTAACCTTAGAACAGCGCGTTGTAGAATCAGCACGTCCAGTGGAAGTTATAAGATTTTCAATAGATGAAACC
AACACTGACCCTGAAAAGGGTGAACATAATTCACCAGTTTCCGGACAGAAGCGCAAGCATGGTGATCTGGAGATGATGGTACAAGAGTCTGGAGATGCAGATGCTATTAT
TATTTTGCGTGCAAACTTTGATGAGTTTATGAGATGTCTTAGACATAAGGCTTGCATTGAACATGTCAAATCTCAGTTTGATGACGGAGTGGTAACTGTTTTGAGTGCCA
TTTTGGAGGCTACTCGAAGTTCTGAAAAAAGTGTGAAAACAGACATAACAGTTCCTTTATCCGTGGATAGCATATATGAGGAGGCAACGAAGACTGAAGTAGGACGTAGT
ATGACCTTAGATAGGGTTGAAGCTTCTCTCTCGGCATTGGGTTGTTCAGGGACGGAAGATTATAAAATTAATTTACAGAAGATCATTGAACAAGCTCAAATTGATGAGGT
TGAATCTGTTGTTTTAAAAAGATATGGAAGAGATGCTTACAGAATGTTCAGATTCCTATCAAAAACTGGTGGTTTGGTTGAGACAGAAAAGATTTCTGACAGTGCATTTG
TCGATAAGAATGAGGCCCCTAAAATTTTATATAAGATGTGGAAGGACGAGTACCTGCACATGGAGAAAGTAACTATAACAGTACCTAGATATTCCTTATGCTTGCTGTGG
AGAGTAGACAGATTTAATGTGTGGGAACATGTTCTGGATGAGATGTATCATGCTTCATTGAACTTGCATCTACGACTGGCTTACGAGGTGGAACAGAACAAAGAGGTTAG
GAGTATTCCTCGAGCCAAACTTAGTGGGGCGCTCGAGAAACAACACAGTCATTGGAGGAAGGTCGGGATTCTCCTGTGGTCGTCGTTGCTGAAGCTCGATGATGCCTTGA
TGCTTTTCCATGACTTCTAA

mRNA sequence

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GCCGAGTTTCCTTTGTGCCCCAATCGCCGTCTTCCTTTAGCAACTCCCTTCTCAAACCAGTTGTCTCCCGCCATTGTTACCAACCTTCTACGCAACAATCTTTGTTCGTC
TTTTACTCACCGGCGCCGGATTTTCTAACCCGCACGCTTCTCCGACCGGTCTCGAAGCGAAAATCTCTTTCGTTTCGAGTTTCTGCTGAATCAGTGCTTTCCGACATTCT
AGTTTGTGGATGTCAATTATAGTTTCTTGATATTGTTGAAGAACAGAAATCTTTGAGAAGGCAATCATGGTGATGACACAGTACGGCATCAAATATGCCGTCTACATTAT
CACTGAGCACTTCGGCAATCTCGTCGCGAAAGTGTGTGAAACCCTGCTCCGAAGGGGCCCTTTGACGTTGAGGCTTCTTGTTCGATTTACGGAGCTTAGCTCCTCACAGG
TCAACAACTGCCTTCTTATTCTCATCCAACATAATTGCGTCCAAGCCTTCACTGCAGTGACAGAAGGTGAGTTTGGAGCCGCACCCAAGTCTGACACACAATATTTGGCG
TTGTTCAGTTACATACTTCATCGTATGAGGTTTTCCAAATTCATGGCGATTGCATTGGAAAAGCTTGAGAAAGATGAAGCTTGTGAAAAACTTCTTGAGGGTTTGCTGCA
GAATGGTAGGCTTTCAATGGAACAAATAATTGAAAGAGCAGATTCTTTTAAACATGAAGGTAACCATTCAATTCCAGATGTTGTACGTAAACTTTTGACTGCCCGTTTTA
TTGAACGCTGTCCAGCCCCCGAACCAACTCTTTCACCCGAAGTCGAAGAACAGGCGCCTCCAAGAAAAAGAGGTGCTAAGGCTGCCAAGGTGTTTAAAGTACCAGTAACC
TTAGAACAGCGCGTTGTAGAATCAGCACGTCCAGTGGAAGTTATAAGATTTTCAATAGATGAAACCAACACTGACCCTGAAAAGGGTGAACATAATTCACCAGTTTCCGG
ACAGAAGCGCAAGCATGGTGATCTGGAGATGATGGTACAAGAGTCTGGAGATGCAGATGCTATTATTATTTTGCGTGCAAACTTTGATGAGTTTATGAGATGTCTTAGAC
ATAAGGCTTGCATTGAACATGTCAAATCTCAGTTTGATGACGGAGTGGTAACTGTTTTGAGTGCCATTTTGGAGGCTACTCGAAGTTCTGAAAAAAGTGTGAAAACAGAC
ATAACAGTTCCTTTATCCGTGGATAGCATATATGAGGAGGCAACGAAGACTGAAGTAGGACGTAGTATGACCTTAGATAGGGTTGAAGCTTCTCTCTCGGCATTGGGTTG
TTCAGGGACGGAAGATTATAAAATTAATTTACAGAAGATCATTGAACAAGCTCAAATTGATGAGGTTGAATCTGTTGTTTTAAAAAGATATGGAAGAGATGCTTACAGAA
TGTTCAGATTCCTATCAAAAACTGGTGGTTTGGTTGAGACAGAAAAGATTTCTGACAGTGCATTTGTCGATAAGAATGAGGCCCCTAAAATTTTATATAAGATGTGGAAG
GACGAGTACCTGCACATGGAGAAAGTAACTATAACAGTACCTAGATATTCCTTATGCTTGCTGTGGAGAGTAGACAGATTTAATGTGTGGGAACATGTTCTGGATGAGAT
GTATCATGCTTCATTGAACTTGCATCTACGACTGGCTTACGAGGTGGAACAGAACAAAGAGGTTAGGAGTATTCCTCGAGCCAAACTTAGTGGGGCGCTCGAGAAACAAC
ACAGTCATTGGAGGAAGGTCGGGATTCTCCTGTGGTCGTCGTTGCTGAAGCTCGATGATGCCTTGATGCTTTTCCATGACTTCTAACTGAAGGATTTGGATCAGTTGCTG
TTTGAAGAGTGAATATGGAAGACGCATTCAGAACAAAATAGTGGTTAGCAGTGCTGTTTCTTTTTCCATTAGGATATTGGAATTTCATATATTGTTATTAAAAAAATATT
ATTATATAACATCATTGACAGATTCTCTGCCAAAAGAATATAATTAAGAAGTTGCATATTTGAAATTATCCACCCCAAATTTTGTTTGAATTACAAGACAGAATCCCCTG
ACGATTGTACATTCGGAGTTTTCTATGAATTCAAAGGAAAAATTATATTATTTGCTTCCAAAAGAAAAATACGATTGTATTTTTTTTCTTCTAG

Protein sequence

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MVMTQYGIKYAVYIITEHFGNLVAKVCETLLRRGPLTLRLLVRFTELSSSQVNNCLLILIQHNCVQAFTAVTEGEFGAAPKSDTQYLALFSYILHRMRFSKFMAIALEKL
EKDEACEKLLEGLLQNGRLSMEQIIERADSFKHEGNHSIPDVVRKLLTARFIERCPAPEPTLSPEVEEQAPPRKRGAKAAKVFKVPVTLEQRVVESARPVEVIRFSIDET
NTDPEKGEHNSPVSGQKRKHGDLEMMVQESGDADAIIILRANFDEFMRCLRHKACIEHVKSQFDDGVVTVLSAILEATRSSEKSVKTDITVPLSVDSIYEEATKTEVGRS
MTLDRVEASLSALGCSGTEDYKINLQKIIEQAQIDEVESVVLKRYGRDAYRMFRFLSKTGGLVETEKISDSAFVDKNEAPKILYKMWKDEYLHMEKVTITVPRYSLCLLW
RVDRFNVWEHVLDEMYHASLNLHLRLAYEVEQNKEVRSIPRAKLSGALEKQHSHWRKVGILLWSSLLKLDDALMLFHDF

Sed0007536 (gene) of Chayote v1 genome