CuGenDBv2

Gene ID	Sed0007566
Organism	Sechium edule (Chayote v1)
Description	GTPase
Genome location	LG02:8269533..8285003
RNA-Seq Expression	Sed0007566
Synteny	Sed0007566
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7015761.1 hypothetical protein SDJN02_23399 [Cucurbita argyrosperma subsp. argyrosperma]

1.3e-23

43.81

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Query:  MVLWEITLGTAYFLRLKRTY---LRLRS---------------------------------------GWNLDYWILRFLDRRKPSAQIRKPNGGLVTKNI
        MVLWEITLGTAYFL LKRTY   L+L+                                        G NL  WILR LDR KPSAQIRK +GG + KN 
Subjt:  MVLWEITLGTAYFLRLKRTY---LRLRS---------------------------------------GWNLDYWILRFLDRRKPSAQIRKPNGGLVTKNI

Query:  TKQTPSSF------------NLNSSRQLFTSATDTWPRKFPTISMMAKSSKAATT-------------------NARGWNNGVVREDIRQWMLQ
        TKQ  SS                SSRQLFTS+T+ WP++FPTISM  K S  ATT                     RGW+ GV+REDIRQWMLQ
Subjt:  TKQTPSSF------------NLNSSRQLFTSATDTWPRKFPTISMMAKSSKAATT-------------------NARGWNNGVVREDIRQWMLQ

XP_022145371.1 uncharacterized protein LOC111014837 [Momordica charantia]

6.3e-23

43.22

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Query:  MVLWEITLGTAYFLRLKRTYL-----------------------RLRS-------------------GWNLDYWILRFLDRRKPSAQIRKP------NGG
        MVLWEITLGTAYFL LKRTY                        R+R+                   G NL  WILR+LDR KPSAQIRKP      N  
Subjt:  MVLWEITLGTAYFLRLKRTYL-----------------------RLRS-------------------GWNLDYWILRFLDRRKPSAQIRKP------NGG

Query:  LVTKNITKQTPSSF------------NLNSSRQLFTSATDTWPRKFPTISMMAKSSKAATT------------------NARGWNNGVVREDIRQWMLQ
            N+TKQ PSS             N  SSRQLFTS+T+ W + FPTISMM KS K A T                    RGW++GV+REDIRQWMLQ
Subjt:  LVTKNITKQTPSSF------------NLNSSRQLFTSATDTWPRKFPTISMMAKSSKAATT------------------NARGWNNGVVREDIRQWMLQ

XP_022923349.1 uncharacterized protein LOC111431071 [Cucurbita moschata]

2.2e-23

43.81

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Query:  MVLWEITLGTAYFLRLKRTY---LRLRS---------------------------------------GWNLDYWILRFLDRRKPSAQIRKPNGGLVTKNI
        MVLWEITLGTAYFL LKRTY   L+L+                                        G NL  WILR LDR KPSAQIRK +GG + KN 
Subjt:  MVLWEITLGTAYFLRLKRTY---LRLRS---------------------------------------GWNLDYWILRFLDRRKPSAQIRKPNGGLVTKNI

Query:  TKQ--------TPSSFNL----NSSRQLFTSATDTWPRKFPTISMMAKSSKAATT-------------------NARGWNNGVVREDIRQWMLQ
        TKQ         P S  +     SSRQLFTS+T+ WP++FPTISM  K S  ATT                     RGW+ GV+REDIRQWMLQ
Subjt:  TKQ--------TPSSFNL----NSSRQLFTSATDTWPRKFPTISMMAKSSKAATT-------------------NARGWNNGVVREDIRQWMLQ

XP_022965321.1 uncharacterized protein LOC111465222 [Cucurbita maxima]

9.7e-24

44.56

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Query:  MVLWEITLGTAYFLRLKRTY---LRLRS---------------------------------------GWNLDYWILRFLDRRKPSAQIRKPNGGLVTKNI
        MVLWEITLGTAYFL LKRTY   L+L+                                        G NL  WILR LDR KPSAQIRK +GG + KN 
Subjt:  MVLWEITLGTAYFLRLKRTY---LRLRS---------------------------------------GWNLDYWILRFLDRRKPSAQIRKPNGGLVTKNI

Query:  TKQTPSSFNL------------NSSRQLFTSATDTWPRKFPTISMMAKSSKAATT------------------NARGWNNGVVREDIRQWMLQ
        TKQ  SS  L             SSRQLFTS+T+ WP++FPTISM  K S  ATT                    RGW+ GV+REDIRQWMLQ
Subjt:  TKQTPSSFNL------------NSSRQLFTSATDTWPRKFPTISMMAKSSKAATT------------------NARGWNNGVVREDIRQWMLQ

XP_038903240.1 uncharacterized protein LOC120089886 [Benincasa hispida]

2.1e-26

46.63

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Query:  MVLWEITLGTAYFLRLKRTY---LRLRS---------------------------------------GWNLDYWILRFLDRRKPSAQIRKPNGGLVTKNI
        MVLWEITLGTAYFL LKRTY   L+L+                                        G NL  WILR LDR KPSAQIRK +GG +T N 
Subjt:  MVLWEITLGTAYFLRLKRTY---LRLRS---------------------------------------GWNLDYWILRFLDRRKPSAQIRKPNGGLVTKNI

Query:  TKQTPSSFNL------------NSSRQLFTSATDTWPRKFPTISMMAKSSKAATT------------------NARGWNNGVVREDIRQWMLQ
        TKQ  SS  L            NSSRQLFTS+T+ WP++FPTISMM KSSK+ATT                    RGW++GV+REDIRQWMLQ
Subjt:  TKQTPSSFNL------------NSSRQLFTSATDTWPRKFPTISMMAKSSKAATT------------------NARGWNNGVVREDIRQWMLQ

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L6E7 Uncharacterized protein

9.8e-22

42.19

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Query:  MVLWEITLGTAYFLRLKRTY---------------------LRLRS---------------------GWNLDYWILRFLDRRKPSAQIRKPNG-------
        MVLWEITLGTAYFL LKRTY                     +R R+                     G NL  WILR LDR KPSAQIRK +G       
Subjt:  MVLWEITLGTAYFLRLKRTY---------------------LRLRS---------------------GWNLDYWILRFLDRRKPSAQIRKPNG-------

Query:  -GLVTKNITKQTPSSFNL---NSSRQLFTSATDTWPRKFPTISMMAKSSKAATT------------------NARGWNNGVVREDIRQWMLQ
          + + +I K   SS  L    SSRQLFTS+T+ WP++FPTISMM KSS  A+                     RGW  GV+R+DIRQWMLQ
Subjt:  -GLVTKNITKQTPSSFNL---NSSRQLFTSATDTWPRKFPTISMMAKSSKAATT------------------NARGWNNGVVREDIRQWMLQ

A0A1S3BJL2 uncharacterized protein LOC103490759

9.8e-22

42.49

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Query:  MVLWEITLGTAYFLRLKRTY---LRLRS---------------------------------------GWNLDYWILRFLDRRKPSAQIRKPNGGLVTKNI
        MVLWEITLGTAYFL LKRTY   L+L+                                        G NL  WILR LDR KPSAQIRK +G  +T N 
Subjt:  MVLWEITLGTAYFLRLKRTY---LRLRS---------------------------------------GWNLDYWILRFLDRRKPSAQIRKPNGGLVTKNI

Query:  TKQTPSSFNL------------NSSRQLFTSATDTWPRKFPTISMMAKSSKAATT------------------NARGWNNGVVREDIRQWMLQ
         KQ  SS  L             SSRQLFTS+T+ WP++FPTISMM KSS  A+                     RGW  GV+REDIR+W+LQ
Subjt:  TKQTPSSFNL------------NSSRQLFTSATDTWPRKFPTISMMAKSSKAATT------------------NARGWNNGVVREDIRQWMLQ

A0A6J1CW49 uncharacterized protein LOC111014837

3.1e-23

43.22

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Query:  MVLWEITLGTAYFLRLKRTYL-----------------------RLRS-------------------GWNLDYWILRFLDRRKPSAQIRKP------NGG
        MVLWEITLGTAYFL LKRTY                        R+R+                   G NL  WILR+LDR KPSAQIRKP      N  
Subjt:  MVLWEITLGTAYFLRLKRTYL-----------------------RLRS-------------------GWNLDYWILRFLDRRKPSAQIRKP------NGG

Query:  LVTKNITKQTPSSF------------NLNSSRQLFTSATDTWPRKFPTISMMAKSSKAATT------------------NARGWNNGVVREDIRQWMLQ
            N+TKQ PSS             N  SSRQLFTS+T+ W + FPTISMM KS K A T                    RGW++GV+REDIRQWMLQ
Subjt:  LVTKNITKQTPSSF------------NLNSSRQLFTSATDTWPRKFPTISMMAKSSKAATT------------------NARGWNNGVVREDIRQWMLQ

A0A6J1E656 uncharacterized protein LOC111431071

1.0e-23

43.81

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Query:  MVLWEITLGTAYFLRLKRTY---LRLRS---------------------------------------GWNLDYWILRFLDRRKPSAQIRKPNGGLVTKNI
        MVLWEITLGTAYFL LKRTY   L+L+                                        G NL  WILR LDR KPSAQIRK +GG + KN 
Subjt:  MVLWEITLGTAYFLRLKRTY---LRLRS---------------------------------------GWNLDYWILRFLDRRKPSAQIRKPNGGLVTKNI

Query:  TKQ--------TPSSFNL----NSSRQLFTSATDTWPRKFPTISMMAKSSKAATT-------------------NARGWNNGVVREDIRQWMLQ
        TKQ         P S  +     SSRQLFTS+T+ WP++FPTISM  K S  ATT                     RGW+ GV+REDIRQWMLQ
Subjt:  TKQ--------TPSSFNL----NSSRQLFTSATDTWPRKFPTISMMAKSSKAATT-------------------NARGWNNGVVREDIRQWMLQ

A0A6J1HLD5 uncharacterized protein LOC111465222

4.7e-24

44.56

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Query:  MVLWEITLGTAYFLRLKRTY---LRLRS---------------------------------------GWNLDYWILRFLDRRKPSAQIRKPNGGLVTKNI
        MVLWEITLGTAYFL LKRTY   L+L+                                        G NL  WILR LDR KPSAQIRK +GG + KN 
Subjt:  MVLWEITLGTAYFLRLKRTY---LRLRS---------------------------------------GWNLDYWILRFLDRRKPSAQIRKPNGGLVTKNI

Query:  TKQTPSSFNL------------NSSRQLFTSATDTWPRKFPTISMMAKSSKAATT------------------NARGWNNGVVREDIRQWMLQ
        TKQ  SS  L             SSRQLFTS+T+ WP++FPTISM  K S  ATT                    RGW+ GV+REDIRQWMLQ
Subjt:  TKQTPSSFNL------------NSSRQLFTSATDTWPRKFPTISMMAKSSKAATT------------------NARGWNNGVVREDIRQWMLQ

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G32260.1 unknown protein

1.6e-11

32.18

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Query:  MVLWEITLGTAYFLRLKRTY---------------------LRLRS---------------------GWNLDYWILRFLDRRKPSAQIR-------KPNG
        MV WEITLGTAYFL L+RTY                     L  R+                     G NL  WILR+LD+ KP+AQIR         N 
Subjt:  MVLWEITLGTAYFLRLKRTY---------------------LRLRS---------------------GWNLDYWILRFLDRRKPSAQIR-------KPNG

Query:  GL----------VTKNITKQTPSSFNLNSSRQLFTSATDTWPRKFPTISMMAKSSK--AATTNAR-------------------GWNNGVVREDIRQWML
         +            K+ T  T +  N  S R LFTS      + FP++SMM +  +    TT  R                   G  NGVVR+DI QWM 
Subjt:  GL----------VTKNITKQTPSSFNLNSSRQLFTSATDTWPRKFPTISMMAKSSK--AATTNAR-------------------GWNNGVVREDIRQWML

Query:  QK
        Q+
Subjt:  QK

AT2G35480.1 unknown protein

3.8e-10

30.96

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Query:  MVLWEITLGTAYFLRLKRTY---------------------------------LRLRS---------GWNLDYWILRFLDRRKPSAQIRKP---------
        MVLWE+ LGTAYFL ++RTY                                 LR+           G NL  WILR LDR KPSAQ+  P         
Subjt:  MVLWEITLGTAYFLRLKRTY---------------------------------LRLRS---------GWNLDYWILRFLDRRKPSAQIRKP---------

Query:  -----NGGLVTKNITKQTPSSFNLNSSRQLFTSATDTWPRKFPTISMM-------------------AKSSKAATTNARGWNNGVVREDIRQWMLQK
                 +  ++  QTP   N    R LF S  + +  K+P  SMM                    +SS      ARG  N V+R+DI QWM+QK
Subjt:  -----NGGLVTKNITKQTPSSFNLNSSRQLFTSATDTWPRKFPTISMM-------------------AKSSKAATTNARGWNNGVVREDIRQWMLQK

Sequences

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CDS sequence

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ATGGTGTTATGGGAGATCACTTTAGGAACCGCCTATTTCTTAAGGCTGAAGCGAACCTATCTGAGACTTAGAAGTGGTTGGAATCTCGATTACTGGATTCTACGATTTCT
GGACAGACGTAAACCATCAGCCCAAATTCGTAAGCCAAACGGTGGATTGGTTACAAAAAACATAACGAAGCAGACTCCAAGCTCGTTTAATCTGAACTCTTCTAGACAGT
TATTTACTTCAGCAACAGATACATGGCCTAGGAAATTTCCTACAATTTCCATGATGGCGAAGTCTTCAAAGGCAGCCACAACAAATGCAAGAGGATGGAATAATGGGGTG
GTCAGGGAAGATATAAGGCAATGGATGTTGCAAAAATAG

mRNA sequence

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Protein sequence

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MVLWEITLGTAYFLRLKRTYLRLRSGWNLDYWILRFLDRRKPSAQIRKPNGGLVTKNITKQTPSSFNLNSSRQLFTSATDTWPRKFPTISMMAKSSKAATTNARGWNNGV
VREDIRQWMLQK

Sed0007566 (gene) of Chayote v1 genome