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Sed0007595 (gene) of Chayote v1 genome

Gene IDSed0007595
OrganismSechium edule (Chayote v1)
Descriptionprotein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial
Genome locationLG04:47408504..47411447
RNA-Seq ExpressionSed0007595
SyntenySed0007595
Gene Ontology termsNA
InterPro domainsIPR043459 - NFD6/NOXY2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7022286.1 hypothetical protein SDJN02_16017, partial [Cucurbita argyrosperma subsp. argyrosperma]1.8e-2582.22Show/hide
Query:  MASVCRSLLTAARSRSMAGRTRALSLKTLNPMPASSSSSSSRGLPSVSRIVSSLATLESLMPLHSAVASARLKSKIAVHSSCWSWLSEGF
        MASVCRS+LTA  SR MAGRTR L  KTLNPMP    SSSS+GL SVSRIVSSLAT+ESLMPLHSAVASARLKSKIAV S CWSWLSEGF
Subjt:  MASVCRSLLTAARSRSMAGRTRALSLKTLNPMPASSSSSSSRGLPSVSRIVSSLATLESLMPLHSAVASARLKSKIAVHSSCWSWLSEGF

XP_022136047.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial [Momordica charantia]4.1e-3086.17Show/hide
Query:  MASVCRSLLTAARSRSMAGRTRALSLKTLNPMPASSSSSSSRGLPSVSRIVSSLATLESLMPLHSAVASARLKSKIAVHSSCWSWLSEGFATPL
        MA+VCRSLLTAA SRS+AGRTR L+ KTLNPMP   SSSSSRG+PSVSRIVSSLAT+ESLMPLHSAVASARLKSKIAV S CWSWLSEGFATPL
Subjt:  MASVCRSLLTAARSRSMAGRTRALSLKTLNPMPASSSSSSSRGLPSVSRIVSSLATLESLMPLHSAVASARLKSKIAVHSSCWSWLSEGFATPL

XP_022933658.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like [Cucurbita moschata]9.5e-2780.85Show/hide
Query:  MASVCRSLLTAARSRSMAGRTRALSLKTLNPMPASSSSSSSRGLPSVSRIVSSLATLESLMPLHSAVASARLKSKIAVHSSCWSWLSEGFATPL
        MASVCRS+LTA  +R + GRTR L  KTLNPMP    SSSSRGL SVSRIVSSLAT+ESLMPLHSAVASARLKSKIAV S CWSWLSEGFATPL
Subjt:  MASVCRSLLTAARSRSMAGRTRALSLKTLNPMPASSSSSSSRGLPSVSRIVSSLATLESLMPLHSAVASARLKSKIAVHSSCWSWLSEGFATPL

XP_023531748.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial [Cucurbita pepo subsp. pepo]2.3e-2884.04Show/hide
Query:  MASVCRSLLTAARSRSMAGRTRALSLKTLNPMPASSSSSSSRGLPSVSRIVSSLATLESLMPLHSAVASARLKSKIAVHSSCWSWLSEGFATPL
        MASVCRS+LTA  SRSMAGRTR L  KTLNPMP    SSSS+GL SVSRIVSSLAT+ESLMPLHSAVASARLKSKIAV S CWSWLSEGFATPL
Subjt:  MASVCRSLLTAARSRSMAGRTRALSLKTLNPMPASSSSSSSRGLPSVSRIVSSLATLESLMPLHSAVASARLKSKIAVHSSCWSWLSEGFATPL

XP_038887804.1 protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial [Benincasa hispida]5.5e-2781.91Show/hide
Query:  MASVCRSLLTAARSRSMAGRTRALSLKTLNPMPASSSSSSSRGLPSVSRIVSSLATLESLMPLHSAVASARLKSKIAVHSSCWSWLSEGFATPL
        MASVCRSLLTAA SRSMAGRTR L+ KTLNP+     SSSSRG  SVSRIVSSLAT+ESLMPLHSAVASARLKSKIAV S CW WLSEGF TPL
Subjt:  MASVCRSLLTAARSRSMAGRTRALSLKTLNPMPASSSSSSSRGLPSVSRIVSSLATLESLMPLHSAVASARLKSKIAVHSSCWSWLSEGFATPL

TrEMBL top hitse value%identityAlignment
A0A0A0K7P3 Uncharacterized protein3.3e-2577.66Show/hide
Query:  MASVCRSLLTAARSRSMAGRTRALSLKTLNPMPASSSSSSSRGLPSVSRIVSSLATLESLMPLHSAVASARLKSKIAVHSSCWSWLSEGFATPL
        MASV RSLLTAA SRSM GRT++L+ KTLNP+P   SSSSSR  PS +RIVSSLA +ESLMPLH+AVASARLKSKIAV S CWSWLSEGFAT L
Subjt:  MASVCRSLLTAARSRSMAGRTRALSLKTLNPMPASSSSSSSRGLPSVSRIVSSLATLESLMPLHSAVASARLKSKIAVHSSCWSWLSEGFATPL

A0A6J1C4G8 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial2.0e-3086.17Show/hide
Query:  MASVCRSLLTAARSRSMAGRTRALSLKTLNPMPASSSSSSSRGLPSVSRIVSSLATLESLMPLHSAVASARLKSKIAVHSSCWSWLSEGFATPL
        MA+VCRSLLTAA SRS+AGRTR L+ KTLNPMP   SSSSSRG+PSVSRIVSSLAT+ESLMPLHSAVASARLKSKIAV S CWSWLSEGFATPL
Subjt:  MASVCRSLLTAARSRSMAGRTRALSLKTLNPMPASSSSSSSRGLPSVSRIVSSLATLESLMPLHSAVASARLKSKIAVHSSCWSWLSEGFATPL

A0A6J1F5F6 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like4.6e-2780.85Show/hide
Query:  MASVCRSLLTAARSRSMAGRTRALSLKTLNPMPASSSSSSSRGLPSVSRIVSSLATLESLMPLHSAVASARLKSKIAVHSSCWSWLSEGFATPL
        MASVCRS+LTA  +R + GRTR L  KTLNPMP    SSSSRGL SVSRIVSSLAT+ESLMPLHSAVASARLKSKIAV S CWSWLSEGFATPL
Subjt:  MASVCRSLLTAARSRSMAGRTRALSLKTLNPMPASSSSSSSRGLPSVSRIVSSLATLESLMPLHSAVASARLKSKIAVHSSCWSWLSEGFATPL

A0A6J1GKU0 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like4.7e-2475.26Show/hide
Query:  MASVCRSLLTAAR---SRSMAGRTRALSLKTLNPMPASSSSSSSRGLPSVSRIVSSLATLESLMPLHSAVASARLKSKIAVHSSCWSWLSEGFATPL
        MAS+CRSLL AA    SRSMAGRTR L+  TL P+P    SSSSRG  SVSRI SSLA+++SLMPLHSAVASARLKSKIAV S CWSWLSEGFATPL
Subjt:  MASVCRSLLTAAR---SRSMAGRTRALSLKTLNPMPASSSSSSSRGLPSVSRIVSSLATLESLMPLHSAVASARLKSKIAVHSSCWSWLSEGFATPL

A0A6J1I675 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial1.1e-2376.04Show/hide
Query:  MASVCRSLLTAAR--SRSMAGRTRALSLKTLNPMPASSSSSSSRGLPSVSRIVSSLATLESLMPLHSAVASARLKSKIAVHSSCWSWLSEGFATPL
        MASVCRSLL AA   SRSMAGRTR L+  TL P+P    SSSSRG  SVSRI  SLA+++SLMPLHSAVASARLKSKIAV S CWSWLSEGFATPL
Subjt:  MASVCRSLLTAAR--SRSMAGRTRALSLKTLNPMPASSSSSSSRGLPSVSRIVSSLATLESLMPLHSAVASARLKSKIAVHSSCWSWLSEGFATPL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G55205.1 unknown protein6.4e-0538.46Show/hide
Query:  NPMPASSSSSSSRGLPSVSRIVSSLATLESLMPLHSAVASARLKSKIAVHSSCWSWLSEGFATPL
        +P+ +SS SS++  +    R+   L+   S++PLHSA+ASARL S ++V S  W  + +G + PL
Subjt:  NPMPASSSSSSSRGLPSVSRIVSSLATLESLMPLHSAVASARLKSKIAVHSSCWSWLSEGFATPL

AT1G70350.1 unknown protein7.0e-0438.89Show/hide
Query:  TAARSRSMAGRTRALSLKTLNPMPASSSSSSSRGLPSVSRIVSSLATLE-----SLMPLHSAVASARLKSKIAVHSSCWSWLSEGFATPL
        +AA S S  G++  ++         + SSSS+R  PS+ R+  S   +E     SL+PLHS  ASA L S +++ +  WS LSEGFA+ L
Subjt:  TAARSRSMAGRTRALSLKTLNPMPASSSSSSSRGLPSVSRIVSSLATLE-----SLMPLHSAVASARLKSKIAVHSSCWSWLSEGFATPL

AT3G13674.1 unknown protein3.2e-0439.06Show/hide
Query:  PMPASSSSSSSRGLPSVSRIVSSLATLESLMPLHSAVASARLKSKIAVHSSCWSWLSEGFATPL
        P P  S+S SS     ++R       L S++PLHSA+AS+RL S ++V S  W  + +G + PL
Subjt:  PMPASSSSSSSRGLPSVSRIVSSLATLESLMPLHSAVASARLKSKIAVHSSCWSWLSEGFATPL

AT4G39300.1 unknown protein1.1e-1753.61Show/hide
Query:  MASVCRSLLTAARSRSMAGRTRALSLKTLNPMPASSSS---SSSRGLPSVSRIVSSLATLESLMPLHSAVASARLKSKIAVHSSCWSWLSEGFATPL
        MAS CRS L A  SR++  R+R ++ K+LN  P ++SS   S S+ +P  SR++S+L ++E+++PLHSAVASARL+S IA  SSCWS LS+G ATPL
Subjt:  MASVCRSLLTAARSRSMAGRTRALSLKTLNPMPASSSS---SSSRGLPSVSRIVSSLATLESLMPLHSAVASARLKSKIAVHSSCWSWLSEGFATPL

AT4G39300.2 unknown protein3.0e-1550Show/hide
Query:  MASVCRSLLTAARSRSMAGRTRALSLKTLNPMPASSSS---SSSRGLPSVSRIVSSLATLESLMPLHSAVASARLKSKIAVHSSCWSWLSEGFATP
        MAS CRS L A  SR++  R+R ++ K+LN  P ++SS   S S+ +P  SR++S+L ++E+++PLHSAVASARL+S IA  SSCWS LS+    P
Subjt:  MASVCRSLLTAARSRSMAGRTRALSLKTLNPMPASSSS---SSSRGLPSVSRIVSSLATLESLMPLHSAVASARLKSKIAVHSSCWSWLSEGFATP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCGTTTGCCGATCACTTCTTACGGCGGCGCGTTCAAGGTCCATGGCCGGCCGTACCAGAGCACTCTCTCTTAAAACCCTAAATCCAATGCCTGCTTCTTCATC
TTCTTCTTCTTCCAGAGGCCTCCCTTCCGTTTCCAGGATTGTTTCGTCTTTGGCTACTCTGGAGTCGCTGATGCCACTCCACAGCGCCGTCGCCTCAGCTCGCCTGAAGT
CTAAAATTGCCGTCCACTCCAGTTGCTGGAGCTGGCTTTCTGAAGGATTTGCAACACCTTTGTGA
mRNA sequenceShow/hide mRNA sequence
AAAAATTTGTATTAATAAATAAAGAAAAGAAAAGGCATTAAATGCGAGTACCCAAGGGGTGGGTTTAGAGAAAACCTGAGTTTCGCCTCCTCCGAAGAAGAACCAGAAAT
GGCTTCCGTTTGCCGATCACTTCTTACGGCGGCGCGTTCAAGGTCCATGGCCGGCCGTACCAGAGCACTCTCTCTTAAAACCCTAAATCCAATGCCTGCTTCTTCATCTT
CTTCTTCTTCCAGAGGCCTCCCTTCCGTTTCCAGGATTGTTTCGTCTTTGGCTACTCTGGAGTCGCTGATGCCACTCCACAGCGCCGTCGCCTCAGCTCGCCTGAAGTCT
AAAATTGCCGTCCACTCCAGTTGCTGGAGCTGGCTTTCTGAAGGATTTGCAACACCTTTGTGACATTAAGACTGGCGTAGGGTGACAAATTTGAATCGACTATACAGCTC
AATGACTGGTAGCTGAGAGGACAATTTGTAAGACTTGCGAGGTTTTTCATCTTTCCTACTGATTTTTGTATGATACCTTTATCACAACTTCACAAGGAAGAATCATACAG
ACAACTGTTTTTTAGTTTTGATGATCATTGTATAATGCAATGCAACCACCTTTTCCTGGATATGCAAAGTTATTGATTACAGTCTCTGACCACAAATCTTGAGAGATTGA
TTTGTTTTTAGTCATCTCTCTGTTGCTATTGACTTTGTCCAATAATCTACATGTGATTTTCTCTATGCCTTAAATATGGGG
Protein sequenceShow/hide protein sequence
MASVCRSLLTAARSRSMAGRTRALSLKTLNPMPASSSSSSSRGLPSVSRIVSSLATLESLMPLHSAVASARLKSKIAVHSSCWSWLSEGFATPL