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Sed0007613 (gene) of Chayote v1 genome

Gene IDSed0007613
OrganismSechium edule (Chayote v1)
DescriptionChlorophyll a-b binding protein, chloroplastic
Genome locationLG10:33259814..33262332
RNA-Seq ExpressionSed0007613
SyntenySed0007613
Gene Ontology termsGO:0009416 - response to light stimulus (biological process)
GO:0009768 - photosynthesis, light harvesting in photosystem I (biological process)
GO:0018298 - protein-chromophore linkage (biological process)
GO:0009522 - photosystem I (cellular component)
GO:0009523 - photosystem II (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016168 - chlorophyll binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001344 - Chlorophyll A-B binding protein, plant and chromista
IPR022796 - Chlorophyll A-B binding protein
IPR023329 - Chlorophyll a/b binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607551.1 Chlorophyll a-b binding protein CP26, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]5.3e-14990.72Show/hide
Query:  MASLAASTAAASLGVSEMLRNPLSFSGTSGRLAPSASNPMASKTVAFFKKKPGVAPKAKPSAAAPVDDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV
        MASLAASTAAASLGVSEMLRNPLSFSG S R A SAS+P+ SK VA F KKP   PK KPSA +P +DELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV
Subjt:  MASLAASTAAASLGVSEMLRNPLSFSGTSGRLAPSASNPMASKTVAFFKKKPGVAPKAKPSAAAPVDDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV

Query:  PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKYGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLVLAVIAEVVLVGGAEYYR
        PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNK+GANCGPEAVWFKTGALLLDGNTLNYFGNNIPINL++AV AEVVLVGGAEYYR
Subjt:  PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKYGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLVLAVIAEVVLVGGAEYYR

Query:  ITNGLNLEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFFIQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL
        I NGLN EDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGF+ QAYVTGEGPVENLAKHLSDPF NNLLTVISGNAERVPTL
Subjt:  ITNGLNLEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFFIQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL

KAG7037190.1 Chlorophyll a-b binding protein CP26, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-14991.07Show/hide
Query:  MASLAASTAAASLGVSEMLRNPLSFSGTSGRLAPSASNPMASKTVAFFKKKPGVAPKAKPSAAAPVDDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV
        MASLAASTAAASLGVSEMLRNPLSFSG S R A SAS+P+ SK VA F KKP  APK KPSA +P +DELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV
Subjt:  MASLAASTAAASLGVSEMLRNPLSFSGTSGRLAPSASNPMASKTVAFFKKKPGVAPKAKPSAAAPVDDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV

Query:  PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKYGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLVLAVIAEVVLVGGAEYYR
        PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNK+GANCGPEAVWFKTGALLLDGNTLNYFGNNIPINL++AV AEVVLVGGAEYYR
Subjt:  PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKYGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLVLAVIAEVVLVGGAEYYR

Query:  ITNGLNLEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFFIQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL
        I NGLN EDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGF+ QAYVTGEGPVENLAKHLSDPF NNLLTVISGNAERVPTL
Subjt:  ITNGLNLEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFFIQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL

XP_022932496.1 chlorophyll a-b binding protein CP26, chloroplastic-like [Cucurbita moschata]1.8e-14991.07Show/hide
Query:  MASLAASTAAASLGVSEMLRNPLSFSGTSGRLAPSASNPMASKTVAFFKKKPGVAPKAKPSAAAPVDDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV
        MASLAASTAAASLGVSEMLRNPLSFSG S R A SAS+P+ SK VA F KKP  APK KPSA +P +DELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV
Subjt:  MASLAASTAAASLGVSEMLRNPLSFSGTSGRLAPSASNPMASKTVAFFKKKPGVAPKAKPSAAAPVDDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV

Query:  PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKYGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLVLAVIAEVVLVGGAEYYR
        PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNK+GANCGPEAVWFKTGALLLDGNTLNYFGNNIPINL++AV AEVVLVGGAEYYR
Subjt:  PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKYGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLVLAVIAEVVLVGGAEYYR

Query:  ITNGLNLEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFFIQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL
        I NGLN EDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGF+ QAYVTGEGPVENLAKHLSDPF NNLLTVISGNAERVPTL
Subjt:  ITNGLNLEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFFIQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL

XP_022973438.1 chlorophyll a-b binding protein CP26, chloroplastic [Cucurbita maxima]6.2e-15091.07Show/hide
Query:  MASLAASTAAASLGVSEMLRNPLSFSGTSGRLAPSASNPMASKTVAFFKKKPGVAPKAKPSAAAPVDDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV
        MASLAASTAAASLGVSEMLRNPLS SG S R A SAS+P+ SK VA F KKP  APK KPSA +PV+DELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV
Subjt:  MASLAASTAAASLGVSEMLRNPLSFSGTSGRLAPSASNPMASKTVAFFKKKPGVAPKAKPSAAAPVDDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV

Query:  PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKYGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLVLAVIAEVVLVGGAEYYR
        PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNK+GANCGPEAVWFKTGALLLDGNTLNYFGNNIPINL++AV+AEVVLVGGAEYYR
Subjt:  PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKYGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLVLAVIAEVVLVGGAEYYR

Query:  ITNGLNLEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFFIQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL
        I NGLN EDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGF+ QAYVTGEGPVENLAKHLSDPF NNLLTVISGNAERVPTL
Subjt:  ITNGLNLEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFFIQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL

XP_038889943.1 chlorophyll a-b binding protein CP26, chloroplastic [Benincasa hispida]1.3e-15091.75Show/hide
Query:  MASLAASTAAASLGVSEMLRNPLSFSGTSGRLAPSASNPMASKTVAFFKKKPGVAPKAKPSAAAPVDDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV
        MASLAASTAAASLGVSEMLRNPLSFSG S R APSAS+P   KTVA F KKP    K KPSA +PV+DELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV
Subjt:  MASLAASTAAASLGVSEMLRNPLSFSGTSGRLAPSASNPMASKTVAFFKKKPGVAPKAKPSAAAPVDDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV

Query:  PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKYGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLVLAVIAEVVLVGGAEYYR
        PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNK+GANCGPEAVWFKTGALLLDGNTLNYFGNNIPINL++AVIAEVVLVGGAEYYR
Subjt:  PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKYGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLVLAVIAEVVLVGGAEYYR

Query:  ITNGLNLEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFFIQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL
        I NGLN EDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGF+ QAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL
Subjt:  ITNGLNLEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFFIQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL

TrEMBL top hitse value%identityAlignment
A0A0A0KXR5 Chlorophyll a-b binding protein, chloroplastic1.4e-14790.72Show/hide
Query:  MASLAASTAAASLGVSEMLRNPLSFSGTSGRLAPSASNPMASKTVAFFKKKPGVAPKAKPSAAAPVDDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV
        MASLAASTAAASLGVSEMLRNPLSF   S R APS S P   KTVA F KKP    K KPSAA+PV+DELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV
Subjt:  MASLAASTAAASLGVSEMLRNPLSFSGTSGRLAPSASNPMASKTVAFFKKKPGVAPKAKPSAAAPVDDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV

Query:  PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKYGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLVLAVIAEVVLVGGAEYYR
        PGDYGYDPFGLSKKPEDF+KYQAFELIHARWAMLGAAGFIIPEAFNK+GANCGPEAVWFKTGALLLDGNTLNYFGNNIPINL++AVIAEVVLVGGAEYYR
Subjt:  PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKYGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLVLAVIAEVVLVGGAEYYR

Query:  ITNGLNLEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFFIQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL
        I NGLN EDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGF+ QAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL
Subjt:  ITNGLNLEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFFIQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL

A0A1S3CBI9 Chlorophyll a-b binding protein, chloroplastic3.1e-14790.38Show/hide
Query:  MASLAASTAAASLGVSEMLRNPLSFSGTSGRLAPSASNPMASKTVAFFKKKPGVAPKAKPSAAAPVDDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV
        MASLAASTAAASLGVSEMLRNPLSFS  S    PSAS+P   KTVA F KKP    K KP+ A+PV+DELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV
Subjt:  MASLAASTAAASLGVSEMLRNPLSFSGTSGRLAPSASNPMASKTVAFFKKKPGVAPKAKPSAAAPVDDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV

Query:  PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKYGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLVLAVIAEVVLVGGAEYYR
        PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNK+GANCGPEAVWFKTGALLLDGNTLNYFGNNIPINL++AVIAEVVLVGGAEYYR
Subjt:  PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKYGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLVLAVIAEVVLVGGAEYYR

Query:  ITNGLNLEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFFIQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL
        I NGLN EDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGF+ QAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL
Subjt:  ITNGLNLEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFFIQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL

A0A6J1DTI7 Chlorophyll a-b binding protein, chloroplastic1.4e-14791.44Show/hide
Query:  MASLAASTAAASLGVSEMLRNPLSFSGTSGRLAPSASNPMASKTVAFFKKKPGVAPKAKPSAA-APVDDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGE
        MASLAASTAAASLGVSEMLRNPLSF G S R APSAS+ +  KTVA F KKP  A KAKPSAA +PV+DELAKWYGPDRRIFLPDGLLDRSEIPEYLNGE
Subjt:  MASLAASTAAASLGVSEMLRNPLSFSGTSGRLAPSASNPMASKTVAFFKKKPGVAPKAKPSAA-APVDDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGE

Query:  VPGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKYGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLVLAVIAEVVLVGGAEYY
        VPGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNK+GANCGPEAVWFKTGALLLDGNTLNYFGNNIPINL++AVIAEVVLVGGAEYY
Subjt:  VPGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKYGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLVLAVIAEVVLVGGAEYY

Query:  RITNGLNLEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFFIQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL
        RI NGLN EDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGF+ QAYVTGEGPVENLAKHLSDPFGNNLLTVISGN ERVPTL
Subjt:  RITNGLNLEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFFIQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL

A0A6J1EWI5 Chlorophyll a-b binding protein, chloroplastic8.7e-15091.07Show/hide
Query:  MASLAASTAAASLGVSEMLRNPLSFSGTSGRLAPSASNPMASKTVAFFKKKPGVAPKAKPSAAAPVDDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV
        MASLAASTAAASLGVSEMLRNPLSFSG S R A SAS+P+ SK VA F KKP  APK KPSA +P +DELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV
Subjt:  MASLAASTAAASLGVSEMLRNPLSFSGTSGRLAPSASNPMASKTVAFFKKKPGVAPKAKPSAAAPVDDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV

Query:  PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKYGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLVLAVIAEVVLVGGAEYYR
        PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNK+GANCGPEAVWFKTGALLLDGNTLNYFGNNIPINL++AV AEVVLVGGAEYYR
Subjt:  PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKYGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLVLAVIAEVVLVGGAEYYR

Query:  ITNGLNLEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFFIQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL
        I NGLN EDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGF+ QAYVTGEGPVENLAKHLSDPF NNLLTVISGNAERVPTL
Subjt:  ITNGLNLEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFFIQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL

A0A6J1ID20 Chlorophyll a-b binding protein, chloroplastic3.0e-15091.07Show/hide
Query:  MASLAASTAAASLGVSEMLRNPLSFSGTSGRLAPSASNPMASKTVAFFKKKPGVAPKAKPSAAAPVDDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV
        MASLAASTAAASLGVSEMLRNPLS SG S R A SAS+P+ SK VA F KKP  APK KPSA +PV+DELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV
Subjt:  MASLAASTAAASLGVSEMLRNPLSFSGTSGRLAPSASNPMASKTVAFFKKKPGVAPKAKPSAAAPVDDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV

Query:  PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKYGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLVLAVIAEVVLVGGAEYYR
        PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNK+GANCGPEAVWFKTGALLLDGNTLNYFGNNIPINL++AV+AEVVLVGGAEYYR
Subjt:  PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKYGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLVLAVIAEVVLVGGAEYYR

Query:  ITNGLNLEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFFIQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL
        I NGLN EDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGF+ QAYVTGEGPVENLAKHLSDPF NNLLTVISGNAERVPTL
Subjt:  ITNGLNLEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFFIQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL

SwissProt top hitse value%identityAlignment
P07369 Chlorophyll a-b binding protein 3C, chloroplastic1.2e-5848.33Show/hide
Query:  LGVSEMLRNPLSFSGTSGRLAPSASNPMASKTVAFFKKKPGVAPKAKPSAAAPVDDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLS
        +  S M  +  +F+G + +L+PS+S    +  V   K     A KAKP+++       + WYGPDR  +L        E P YL GE PGDYG+D  GLS
Subjt:  LGVSEMLRNPLSFSGTSGRLAPSASNPMASKTVAFFKKKPGVAPKAKPSAAAPVDDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLS

Query:  KKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKYGANCGPEAVWFKTGALLLDGNTLNYFGNN--IPINLVLAVIA-EVVLVGGAEYYRITNGL--NL
          PE F+K +  E+IH RWAMLGA G + PE   + G   G EAVWFK G+ +     L+Y GN   +    +LA+ A +VVL+G  E YRI  G    +
Subjt:  KKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKYGANCGPEAVWFKTGALLLDGNTLNYFGNN--IPINLVLAVIA-EVVLVGGAEYYRITNGL--NL

Query:  EDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFFIQAYVTGEGPVENLAKHLSDPFGNN
         D L+PGG FDPLGLADDP+  A LKVKEIKNGRLAMF+M GFF+QA VTG+GP+ENLA HL+DP  NN
Subjt:  EDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFFIQAYVTGEGPVENLAKHLSDPFGNN

P12330 Chlorophyll a-b binding protein 1, chloroplastic2.2e-5750.39Show/hide
Query:  SGTSGRLAPSASNPMASKTVAFFKKKPGVAPKAKPSAAAPVDDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFSKYQAFE
        S    R APS S+ +  +     +K    A K KP+A++      + WYG DR ++L  G L   E P YL GE PGDYG+D  GLS  PE F+K +  E
Subjt:  SGTSGRLAPSASNPMASKTVAFFKKKPGVAPKAKPSAAAPVDDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFSKYQAFE

Query:  LIHARWAMLGAAGFIIPEAFNKYGANCGPEAVWFKTGALLLDGNTLNYFGNN--IPINLVLAVIA-EVVLVGGAEYYRITNGL--NLEDKLHPGGPFDPL
        +IH+RWAMLGA G + PE   + G   G EAVWFK G+ +     L+Y GN   I    +LA+ A +VVL+G  E YRI  G    + D L+PGG FDPL
Subjt:  LIHARWAMLGAAGFIIPEAFNKYGANCGPEAVWFKTGALLLDGNTLNYFGNN--IPINLVLAVIA-EVVLVGGAEYYRITNGL--NLEDKLHPGGPFDPL

Query:  GLADDPDQAAILKVKEIKNGRLAMFAMLGFFIQAYVTGEGPVENLAKHLSDPFGNN
        GLADDP+  A LKVKEIKNGRLAMF+M GFF+QA VTG+GP+ENLA HL+DP  NN
Subjt:  GLADDPDQAAILKVKEIKNGRLAMFAMLGFFIQAYVTGEGPVENLAKHLSDPFGNN

P15193 Chlorophyll a-b binding protein type 2 member 1A, chloroplastic1.7e-5753.36Show/hide
Query:  KPSAAAPVDDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKYGANCGPEAVW
        K S AA +D   + WYGPDR ++L        E P YL GE PGDYG+D  GLS  PE F+K +  E+IH+RWAMLGA G + PE   + G   G EAVW
Subjt:  KPSAAAPVDDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKYGANCGPEAVW

Query:  FKTGALLLDGNTLNYFGNN--IPINLVLAVIA-EVVLVGGAEYYRITNGL--NLEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFFIQ
        FK GA +     L+Y G+   I    +LA+ A +V+L+G  E YR+  G    + D ++PGG FDPLGLADDPD  A LKVKEIKNGRLAMF+M GFF+Q
Subjt:  FKTGALLLDGNTLNYFGNN--IPINLVLAVIA-EVVLVGGAEYYRITNGL--NLEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFFIQ

Query:  AYVTGEGPVENLAKHLSDPFGNN
        A VTG+GP+ENLA HL+DP  NN
Subjt:  AYVTGEGPVENLAKHLSDPFGNN

P27517 Chlorophyll a-b binding protein of LHCII type I, chloroplastic1.2e-5853.42Show/hide
Query:  APVDDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKYGANCGPEAVWFKTGA
        A V     ++YGPDR  FL  G    ++ PEYL GE PGDYG+D  GLS  P+ F++Y+  ELIHARWA+LGA G + PE  ++Y      E VWFK GA
Subjt:  APVDDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKYGANCGPEAVWFKTGA

Query:  LLLDGNTLNYFGNNIPI---NLVLAVIAEVVLVGGAEYYRITNG----LNLEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFFIQAYV
         +     LNY GN   I   +++  +  +VVL+G AE YR   G    L+  D L+PGGPFDPLGLADDPD  A LKVKEIKNGRLAMF+ LGFF+QA V
Subjt:  LLLDGNTLNYFGNNIPI---NLVLAVIAEVVLVGGAEYYRITNG----LNLEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFFIQAYV

Query:  TGEGPVENLAKHLSDPFGN
        TG+GPV+NL  HL+DP  N
Subjt:  TGEGPVENLAKHLSDPFGN

Q9XF89 Chlorophyll a-b binding protein CP26, chloroplastic6.5e-13484.75Show/hide
Query:  ASLGVSEMLRNPLSFSGTSGRLAPSASNPMASKTVAFF-KKKPGVAPKAKPSAAAPVDDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPF
        ASLGVSEML  PL+F   S   AP AS+P   KTVA F KKKP  AP AK  A +   DELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV GDYGYDPF
Subjt:  ASLGVSEMLRNPLSFSGTSGRLAPSASNPMASKTVAFF-KKKPGVAPKAKPSAAAPVDDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPF

Query:  GLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKYGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLVLAVIAEVVLVGGAEYYRITNGLNLED
        GL KKPE+F+KYQAFELIHARWAMLGAAGFIIPEA NKYGANCGPEAVWFKTGALLLDGNTLNYFG NIPINLVLAV+AEVVL+GGAEYYRITNGL+ ED
Subjt:  GLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKYGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLVLAVIAEVVLVGGAEYYRITNGLNLED

Query:  KLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFFIQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL
        KLHPGGPFDPLGLA DP+Q A+LKVKEIKNGRLAMFAMLGFFIQAYVTGEGPVENLAKHLSDPFGNNLLTVI+G AER PTL
Subjt:  KLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFFIQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL

Arabidopsis top hitse value%identityAlignment
AT1G29910.1 chlorophyll A/B binding protein 38.6e-5745.56Show/hide
Query:  LGVSEMLRNPLSFSGTSGRLAPSASNPMASKTVAFFKKKPGVAPKAKPSAAAPVDDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLS
        +  S M  +  +F+G +  L+P+AS  + S  V   K           + A P     + WYG DR  +L        E P YL GE PGDYG+D  GLS
Subjt:  LGVSEMLRNPLSFSGTSGRLAPSASNPMASKTVAFFKKKPGVAPKAKPSAAAPVDDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLS

Query:  KKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKYGANCGPEAVWFKTGALLLDGNTLNYFGNN--IPINLVLAVIA-EVVLVGGAEYYRITNGLNL--
          PE F++ +  E+IH+RWAMLGA G + PE   + G   G EAVWFK G+ +     L+Y GN   +    +LA+ A +V+L+G  E YR+     L  
Subjt:  KKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKYGANCGPEAVWFKTGALLLDGNTLNYFGNN--IPINLVLAVIA-EVVLVGGAEYYRITNGLNL--

Query:  -EDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFFIQAYVTGEGPVENLAKHLSDPFGNN
         ED L+PGG FDPLGLA DP+  A LKVKE+KNGRLAMF+M GFF+QA VTG+GP+ENLA HL+DP  NN
Subjt:  -EDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFFIQAYVTGEGPVENLAKHLSDPFGNN

AT1G29920.1 chlorophyll A/B-binding protein 28.6e-5745.56Show/hide
Query:  LGVSEMLRNPLSFSGTSGRLAPSASNPMASKTVAFFKKKPGVAPKAKPSAAAPVDDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLS
        +  S M  +  +F+G +  L+P+AS  + S  V   K           + A P     + WYG DR  +L        E P YL GE PGDYG+D  GLS
Subjt:  LGVSEMLRNPLSFSGTSGRLAPSASNPMASKTVAFFKKKPGVAPKAKPSAAAPVDDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLS

Query:  KKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKYGANCGPEAVWFKTGALLLDGNTLNYFGNN--IPINLVLAVIA-EVVLVGGAEYYRITNGLNL--
          PE F++ +  E+IH+RWAMLGA G + PE   + G   G EAVWFK G+ +     L+Y GN   +    +LA+ A +V+L+G  E YR+     L  
Subjt:  KKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKYGANCGPEAVWFKTGALLLDGNTLNYFGNN--IPINLVLAVIA-EVVLVGGAEYYRITNGLNL--

Query:  -EDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFFIQAYVTGEGPVENLAKHLSDPFGNN
         ED L+PGG FDPLGLA DP+  A LKVKE+KNGRLAMF+M GFF+QA VTG+GP+ENLA HL+DP  NN
Subjt:  -EDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFFIQAYVTGEGPVENLAKHLSDPFGNN

AT1G29930.1 chlorophyll A/B binding protein 15.0e-5745.56Show/hide
Query:  LGVSEMLRNPLSFSGTSGRLAPSASNPMASKTVAFFKKKPGVAPKAKPSAAAPVDDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLS
        +  S M  +  +F+G + +L+P+AS  + S  V   K           + A P     + WYG DR  +L        E P YL GE PGDYG+D  GLS
Subjt:  LGVSEMLRNPLSFSGTSGRLAPSASNPMASKTVAFFKKKPGVAPKAKPSAAAPVDDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLS

Query:  KKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKYGANCGPEAVWFKTGALLLDGNTLNYFGNN--IPINLVLAVIA-EVVLVGGAEYYRITNGLNL--
          PE F++ +  E+IH+RWAMLGA G + PE   + G   G EAVWFK G+ +     L+Y GN   +    +LA+ A +V+L+G  E YR+     L  
Subjt:  KKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKYGANCGPEAVWFKTGALLLDGNTLNYFGNN--IPINLVLAVIA-EVVLVGGAEYYRITNGLNL--

Query:  -EDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFFIQAYVTGEGPVENLAKHLSDPFGNN
         ED L+PGG FDPLGLA DP+  A LKVKE+KNGRLAMF+M GFF+QA VTG+GP+ENLA HL+DP  NN
Subjt:  -EDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFFIQAYVTGEGPVENLAKHLSDPFGNN

AT2G34430.1 light-harvesting chlorophyll-protein complex II subunit B12.8e-5544.44Show/hide
Query:  LGVSEMLRNPLSFSGTSGRLAPSASNPMASKTVAFFKKKPGVAPKAKPSAAAPVDDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLS
        +  S M  +  + +G + +L+P+AS    +  +   K      P   P            WYG DR  +L        E P YL GE PGDYG+D  GLS
Subjt:  LGVSEMLRNPLSFSGTSGRLAPSASNPMASKTVAFFKKKPGVAPKAKPSAAAPVDDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLS

Query:  KKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKYGANCGPEAVWFKTGALLLDGNTLNYFGNN--IPINLVLAVIA-EVVLVGGAEYYRITNGLNL--
          PE F++ +  E+IH+RWAMLGA G + PE   + G   G EAVWFK G+ +     L+Y GN   +    +LA+ A +V+L+G  E YR+     L  
Subjt:  KKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKYGANCGPEAVWFKTGALLLDGNTLNYFGNN--IPINLVLAVIA-EVVLVGGAEYYRITNGLNL--

Query:  -EDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFFIQAYVTGEGPVENLAKHLSDPFGNN
         ED L+PGG FDPLGLA DP+  A LKVKE+KNGRLAMF+M GFF+QA VTG+GP+ENLA HL+DP  NN
Subjt:  -EDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFFIQAYVTGEGPVENLAKHLSDPFGNN

AT4G10340.1 light harvesting complex of photosystem II 54.6e-13584.75Show/hide
Query:  ASLGVSEMLRNPLSFSGTSGRLAPSASNPMASKTVAFF-KKKPGVAPKAKPSAAAPVDDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPF
        ASLGVSEML  PL+F   S   AP AS+P   KTVA F KKKP  AP AK  A +   DELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV GDYGYDPF
Subjt:  ASLGVSEMLRNPLSFSGTSGRLAPSASNPMASKTVAFF-KKKPGVAPKAKPSAAAPVDDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPF

Query:  GLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKYGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLVLAVIAEVVLVGGAEYYRITNGLNLED
        GL KKPE+F+KYQAFELIHARWAMLGAAGFIIPEA NKYGANCGPEAVWFKTGALLLDGNTLNYFG NIPINLVLAV+AEVVL+GGAEYYRITNGL+ ED
Subjt:  GLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKYGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLVLAVIAEVVLVGGAEYYRITNGLNLED

Query:  KLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFFIQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL
        KLHPGGPFDPLGLA DP+Q A+LKVKEIKNGRLAMFAMLGFFIQAYVTGEGPVENLAKHLSDPFGNNLLTVI+G AER PTL
Subjt:  KLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFFIQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGAAGTCCACTAGAATCAACCATATAGCATCTTCAACCTCCACATCTAGTGTTCACCATTTACACAAAATTTTCCATTCTCCACTCTTGGCTTCTGCTTCTTTGGC
TATGGCTTCCCTAGCAGCCTCCACCGCCGCCGCCTCCCTCGGGGTTTCGGAAATGCTGAGGAATCCCCTCAGCTTTTCCGGAACTTCGGGGAGGTTGGCCCCCTCGGCTT
CTAATCCCATGGCCTCCAAGACTGTTGCATTTTTTAAGAAGAAGCCGGGTGTCGCTCCCAAGGCAAAGCCCTCCGCCGCCGCCCCGGTCGACGACGAGCTCGCCAAGTGG
TATGGTCCTGACAGAAGGATTTTCTTGCCCGATGGGCTGTTGGACCGATCCGAAATCCCTGAGTACTTGAACGGAGAAGTCCCCGGAGACTACGGTTACGACCCCTTTGG
ACTCAGCAAGAAACCAGAAGATTTCAGCAAATACCAAGCATTTGAGTTGATCCACGCACGATGGGCCATGCTTGGAGCTGCTGGTTTCATCATCCCTGAGGCCTTCAACA
AGTACGGCGCCAACTGCGGCCCCGAGGCTGTCTGGTTCAAGACTGGAGCTCTGCTTCTTGATGGAAACACATTGAATTACTTTGGAAACAACATTCCCATCAACCTTGTT
CTCGCGGTCATTGCCGAGGTTGTTCTTGTTGGTGGTGCTGAATATTACAGAATCACCAATGGCTTGAACCTTGAGGACAAGCTTCACCCGGGAGGGCCATTTGACCCGTT
GGGGCTGGCAGACGATCCCGACCAGGCGGCAATCTTGAAGGTGAAGGAGATAAAGAATGGAAGATTGGCGATGTTTGCGATGCTCGGGTTTTTCATCCAGGCTTACGTGA
CAGGAGAAGGGCCAGTGGAGAACTTGGCCAAGCATTTAAGTGACCCTTTTGGAAACAACTTGCTCACAGTCATTTCTGGGAATGCTGAAAGAGTTCCAACTCTTTAA
mRNA sequenceShow/hide mRNA sequence
GAAGAAACCACACAACACAATCTAAGATTTCCAAATGGCATTGTTTGATAGGATAGCTCACGTTATCCAAAGCATGCAATAGGAGAGACCAACTGAATGGCCAAATCTGC
CACGTCACCATCCTCCACCAATCACAACACTTCATTGGATTTCTCAGCTCCTCTCCAAACCAATAACCAATCACAAACCTGAATCCTACGTGGCATGTCGAAGTCCACTA
GAATCAACCATATAGCATCTTCAACCTCCACATCTAGTGTTCACCATTTACACAAAATTTTCCATTCTCCACTCTTGGCTTCTGCTTCTTTGGCTATGGCTTCCCTAGCA
GCCTCCACCGCCGCCGCCTCCCTCGGGGTTTCGGAAATGCTGAGGAATCCCCTCAGCTTTTCCGGAACTTCGGGGAGGTTGGCCCCCTCGGCTTCTAATCCCATGGCCTC
CAAGACTGTTGCATTTTTTAAGAAGAAGCCGGGTGTCGCTCCCAAGGCAAAGCCCTCCGCCGCCGCCCCGGTCGACGACGAGCTCGCCAAGTGGTATGGTCCTGACAGAA
GGATTTTCTTGCCCGATGGGCTGTTGGACCGATCCGAAATCCCTGAGTACTTGAACGGAGAAGTCCCCGGAGACTACGGTTACGACCCCTTTGGACTCAGCAAGAAACCA
GAAGATTTCAGCAAATACCAAGCATTTGAGTTGATCCACGCACGATGGGCCATGCTTGGAGCTGCTGGTTTCATCATCCCTGAGGCCTTCAACAAGTACGGCGCCAACTG
CGGCCCCGAGGCTGTCTGGTTCAAGACTGGAGCTCTGCTTCTTGATGGAAACACATTGAATTACTTTGGAAACAACATTCCCATCAACCTTGTTCTCGCGGTCATTGCCG
AGGTTGTTCTTGTTGGTGGTGCTGAATATTACAGAATCACCAATGGCTTGAACCTTGAGGACAAGCTTCACCCGGGAGGGCCATTTGACCCGTTGGGGCTGGCAGACGAT
CCCGACCAGGCGGCAATCTTGAAGGTGAAGGAGATAAAGAATGGAAGATTGGCGATGTTTGCGATGCTCGGGTTTTTCATCCAGGCTTACGTGACAGGAGAAGGGCCAGT
GGAGAACTTGGCCAAGCATTTAAGTGACCCTTTTGGAAACAACTTGCTCACAGTCATTTCTGGGAATGCTGAAAGAGTTCCAACTCTTTAAAATTAATTAATGCAAATCG
TTTAATGTGTTTGTAAAAATTTGTATTGAGGCTATTTGTAGCCCCTCACTCTCAGTGCATTTGAAAGTCATATGAACAAGAGTTTTCATCAAATTTTCTATGAACTTGTG
TGTGTGTTCAATTGGCAGAGAATTGGTGATGAATTTTGATAAGAACCGATCTCTATTACGATATCAAAATAATAGAATTATAAGATAAACC
Protein sequenceShow/hide protein sequence
MSKSTRINHIASSTSTSSVHHLHKIFHSPLLASASLAMASLAASTAAASLGVSEMLRNPLSFSGTSGRLAPSASNPMASKTVAFFKKKPGVAPKAKPSAAAPVDDELAKW
YGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKYGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLV
LAVIAEVVLVGGAEYYRITNGLNLEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFFIQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL