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Sed0007630 (gene) of Chayote v1 genome

Gene IDSed0007630
OrganismSechium edule (Chayote v1)
DescriptionTranscription initiation factor TFIID subunit 11-like
Genome locationLG03:5777869..5778895
RNA-Seq ExpressionSed0007630
SyntenySed0007630
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022141363.1 prothymosin alpha-B [Momordica charantia]1.2e-5874.63Show/hide
Query:  MAETTSVDEVTFDAKRKPDPGCEAKEERSSKIQKLEAVEEDSCDSVKNGENGVHKHSGEQIDGSS--AEGKDGEVLGADVDAVEADDEE-DYEDEEDDDS
        MAETTS +E TFDAKRKPDP CEAKEE S+KIQKLE V+++SC  VK  ENG HK S E ID  S  AEGKDGEV GA VDA EADDEE D ED ED++ 
Subjt:  MAETTSVDEVTFDAKRKPDPGCEAKEERSSKIQKLEAVEEDSCDSVKNGENGVHKHSGEQIDGSS--AEGKDGEVLGADVDAVEADDEE-DYEDEEDDDS

Query:  EEDSEKSSEKAAEDRKGKGIVKVDKGKGKLIEEDDDDED-SSDDDGSELGSDESDLSDDPLAEVDLDNILPSRTRRRAVHPGVYFATDLVNNDDDSSDSD
        E D E+ + +A EDRKGKGIVK DKGKGKLIEEDDDD+D  S D GSELGS+ESDLSDDPL EVDLDNILPSRTRRR VHPGVYFA DL N+DDDSSDSD
Subjt:  EEDSEKSSEKAAEDRKGKGIVKVDKGKGKLIEEDDDDED-SSDDDGSELGSDESDLSDDPLAEVDLDNILPSRTRRRAVHPGVYFATDLVNNDDDSSDSD

Query:  A
        A
Subjt:  A

XP_022939215.1 prostatic spermine-binding protein isoform X2 [Cucurbita moschata]4.7e-5270.24Show/hide
Query:  MAET-TSVDEVTFDAKRKP-DPGCEAKEERSSKIQKLEAVEEDSCDSV-KNGENGVHKHSGEQID--GSSAEGKDGEVLGADVDAVEADDEEDYEDEEDD
        MAET +S +E  FDAKRKP DP CEAKEERS+KIQKLE VE + C+ V KNG+NG HK   +QID   S+AEGKD  VL ADVDA      ++ ED++D+
Subjt:  MAET-TSVDEVTFDAKRKP-DPGCEAKEERSSKIQKLEAVEEDSCDSV-KNGENGVHKHSGEQID--GSSAEGKDGEVLGADVDAVEADDEEDYEDEEDD

Query:  DSEEDSEKSSEKAA-EDRKGKGIVKVDKGKGKLIEEDDDDEDSSD--DDGSELGSDESDLSDDPLAEVDLDNILPSRTRRRAVHPGVYFATDLVNNDDDS
        D  E+ EKSS KAA EDRKGKGI+K DKGKGKLIEEDDDD+D  D  DDGSE  ++ESDLSDDPLAEVDLDNILPSRTRRR VHPGVYFATDL N DDDS
Subjt:  DSEEDSEKSSEKAA-EDRKGKGIVKVDKGKGKLIEEDDDDEDSSD--DDGSELGSDESDLSDDPLAEVDLDNILPSRTRRRAVHPGVYFATDLVNNDDDS

Query:  SDSDA
        SDSDA
Subjt:  SDSDA

XP_022992871.1 nucleolin-like [Cucurbita maxima]1.6e-5270.73Show/hide
Query:  MAET-TSVDEVTFDAKRKP-DPGCEAKEERSSKIQKLEAVEEDSCDSV-KNGENGVHKHSGEQID--GSSAEGKDGEVLGADVDAVEADDEEDYEDEEDD
        MAET +S +E  FDAKRKP DP CEAKEERS+KIQKLE VE + C+ V KNG+NG HK   EQID   S+AEGKD  V  ADVDA   ++ EDY DE+D 
Subjt:  MAET-TSVDEVTFDAKRKP-DPGCEAKEERSSKIQKLEAVEEDSCDSV-KNGENGVHKHSGEQID--GSSAEGKDGEVLGADVDAVEADDEEDYEDEEDD

Query:  DSEEDSEKSSEKAAEDRKGKGIVKVDKGKGKLIEEDDDDED---SSDDDGSELGSDESDLSDDPLAEVDLDNILPSRTRRRAVHPGVYFATDLVNNDDDS
           E+ EKSS KAA+DRKGKGI+K DKGKGKLIEEDDDD+D    S DDGSE  ++ESDLSDDPLAEVDLDNILPSRTRRR VHPGVYFATDL N DDDS
Subjt:  DSEEDSEKSSEKAAEDRKGKGIVKVDKGKGKLIEEDDDDED---SSDDDGSELGSDESDLSDDPLAEVDLDNILPSRTRRRAVHPGVYFATDLVNNDDDS

Query:  SDSDA
        SDSDA
Subjt:  SDSDA

XP_023551083.1 nucleolin-like [Cucurbita pepo subsp. pepo]1.4e-5169.9Show/hide
Query:  MAET-TSVDEVTFDAKRKP-DPGCEAKEERSSKIQKLEAVEEDSCDSV-KNGENGVHKHSGEQID--GSSAEGKDGEVLGADVDAVEADDEEDYEDEEDD
        MAET +S +E  FD KRKP DP CEAKEERS+KIQKLE VE + C+ V KNG+NG HK   EQID   S+AEGKD  VL ADVDA      ++ ED++D+
Subjt:  MAET-TSVDEVTFDAKRKP-DPGCEAKEERSSKIQKLEAVEEDSCDSV-KNGENGVHKHSGEQID--GSSAEGKDGEVLGADVDAVEADDEEDYEDEEDD

Query:  DSEEDSEKSSEKAA-EDRKGKGIVKVDKGKGKLIEEDDDDED---SSDDDGSELGSDESDLSDDPLAEVDLDNILPSRTRRRAVHPGVYFATDLVNNDDD
        D  E+ EKSS KAA EDRKGKGI+K DKGKGKLIEEDDDD+D    S DDGSE  ++ESDLSDDPLAEVDLDNILPSRTRRR VHPGVYFATDL N DDD
Subjt:  DSEEDSEKSSEKAA-EDRKGKGIVKVDKGKGKLIEEDDDDED---SSDDDGSELGSDESDLSDDPLAEVDLDNILPSRTRRRAVHPGVYFATDLVNNDDD

Query:  SSDSDA
        SSDSDA
Subjt:  SSDSDA

XP_038906649.1 pheromone-processing carboxypeptidase KEX1 [Benincasa hispida]9.1e-5672.2Show/hide
Query:  MAETTSVDEVTFDAKRKP-DPGCEAKEERSSKIQKLEAVE-EDSCDSV-KNGENG-VHKHSGEQID---GSSAEGKDGE-VLGADVDAVEADDEEDYEDE
        MAETT+++EV FDAKRKP DP CEAKEERS+K+QKLE VE E+SC+ V KNGENG  HK + E ID    S AEGKD + V+GAD+DA      ++ ED+
Subjt:  MAETTSVDEVTFDAKRKP-DPGCEAKEERSSKIQKLEAVE-EDSCDSV-KNGENG-VHKHSGEQID---GSSAEGKDGE-VLGADVDAVEADDEEDYEDE

Query:  EDDDSEEDSEKSSEKAAEDRKGKGIVKVDKGKGKLIEEDDDDEDSSDDDGSELGSDESDLSDDPLAEVDLDNILPSRTRRRAVHPGVYFATDLVNNDDDS
        ED+D  E+ EKSS KAAEDRKGKGI+K DKGKGKLIEEDDDD++ S DDGSEL S+ESDLSDDPLAEVDLDNILPSRTRRR VHPGVYFATDL N+DDDS
Subjt:  EDDDSEEDSEKSSEKAAEDRKGKGIVKVDKGKGKLIEEDDDDEDSSDDDGSELGSDESDLSDDPLAEVDLDNILPSRTRRRAVHPGVYFATDLVNNDDDS

Query:  SDSDA
        SDSDA
Subjt:  SDSDA

TrEMBL top hitse value%identityAlignment
A0A0A0KMR8 Uncharacterized protein2.5e-5170.24Show/hide
Query:  MAETTS-VDEVTFDAKRKPDPGC-EAKEERSSKIQKLEAVE-EDSCDSV-KNGENGVHKHSGEQIDGSSA---EGK-DGEVLGADVDAVEADDEEDYEDE
        MAE T+  +EV FDAKRKP   C + KEERS+KIQKLE VE E+SC+ V  N ENG HK S EQ+D  S+   EGK D  V GA +DA   D+EEDYEDE
Subjt:  MAETTS-VDEVTFDAKRKPDPGC-EAKEERSSKIQKLEAVE-EDSCDSV-KNGENGVHKHSGEQIDGSSA---EGK-DGEVLGADVDAVEADDEEDYEDE

Query:  EDDDSEEDSEKSSEKAAEDRKGKGIVKVDKGKGKLIEEDDDDEDSSDDDGSELGSDESDLSDDPLAEVDLDNILPSRTRRRAVHPGVYFATDLVNNDDDS
        +D    ED EKSS K AEDRKGKGI+K DKGKGKLIEEDDDD++ S DDGS+L S+ESDLSDDPLAEVDLDNILPSRTRRR VHPGVYFATDL N+DDDS
Subjt:  EDDDSEEDSEKSSEKAAEDRKGKGIVKVDKGKGKLIEEDDDDEDSSDDDGSELGSDESDLSDDPLAEVDLDNILPSRTRRRAVHPGVYFATDLVNNDDDS

Query:  SDSDA
        SDSDA
Subjt:  SDSDA

A0A5D3E1E7 Acidic repeat-containing protein4.3e-5170.24Show/hide
Query:  MAETTS-VDEVTFDAKRKPDPGC-EAKEERSSKIQKLEAVE-EDSCDSVK-NGENGVHKHSGEQIDGSSA---EGKDGE-VLGADVDAVEADDEEDYEDE
        MAE T+  +EV FDAKRKP   C + KEE S+KIQKLE VE E+SC+ VK N ENG HK S EQID  S+   EGKD + V GA +DA   D+EEDYEDE
Subjt:  MAETTS-VDEVTFDAKRKPDPGC-EAKEERSSKIQKLEAVE-EDSCDSVK-NGENGVHKHSGEQIDGSSA---EGKDGE-VLGADVDAVEADDEEDYEDE

Query:  EDDDSEEDSEKSSEKAAEDRKGKGIVKVDKGKGKLIEEDDDDEDSSDDDGSELGSDESDLSDDPLAEVDLDNILPSRTRRRAVHPGVYFATDLVNNDDDS
        +D    ED EKSS K A DRKGKGI+K DKGKGKLIEEDDDD++ S DDGS+L S+ESDLSDDPLAEVDLDNILPSRTRRR VHPGVYFATDL N+DDDS
Subjt:  EDDDSEEDSEKSSEKAAEDRKGKGIVKVDKGKGKLIEEDDDDEDSSDDDGSELGSDESDLSDDPLAEVDLDNILPSRTRRRAVHPGVYFATDLVNNDDDS

Query:  SDSDA
        SDSDA
Subjt:  SDSDA

A0A6J1CKB5 prothymosin alpha-B5.6e-5974.63Show/hide
Query:  MAETTSVDEVTFDAKRKPDPGCEAKEERSSKIQKLEAVEEDSCDSVKNGENGVHKHSGEQIDGSS--AEGKDGEVLGADVDAVEADDEE-DYEDEEDDDS
        MAETTS +E TFDAKRKPDP CEAKEE S+KIQKLE V+++SC  VK  ENG HK S E ID  S  AEGKDGEV GA VDA EADDEE D ED ED++ 
Subjt:  MAETTSVDEVTFDAKRKPDPGCEAKEERSSKIQKLEAVEEDSCDSVKNGENGVHKHSGEQIDGSS--AEGKDGEVLGADVDAVEADDEE-DYEDEEDDDS

Query:  EEDSEKSSEKAAEDRKGKGIVKVDKGKGKLIEEDDDDED-SSDDDGSELGSDESDLSDDPLAEVDLDNILPSRTRRRAVHPGVYFATDLVNNDDDSSDSD
        E D E+ + +A EDRKGKGIVK DKGKGKLIEEDDDD+D  S D GSELGS+ESDLSDDPL EVDLDNILPSRTRRR VHPGVYFA DL N+DDDSSDSD
Subjt:  EEDSEKSSEKAAEDRKGKGIVKVDKGKGKLIEEDDDDED-SSDDDGSELGSDESDLSDDPLAEVDLDNILPSRTRRRAVHPGVYFATDLVNNDDDSSDSD

Query:  A
        A
Subjt:  A

A0A6J1FM23 prostatic spermine-binding protein isoform X22.3e-5270.24Show/hide
Query:  MAET-TSVDEVTFDAKRKP-DPGCEAKEERSSKIQKLEAVEEDSCDSV-KNGENGVHKHSGEQID--GSSAEGKDGEVLGADVDAVEADDEEDYEDEEDD
        MAET +S +E  FDAKRKP DP CEAKEERS+KIQKLE VE + C+ V KNG+NG HK   +QID   S+AEGKD  VL ADVDA      ++ ED++D+
Subjt:  MAET-TSVDEVTFDAKRKP-DPGCEAKEERSSKIQKLEAVEEDSCDSV-KNGENGVHKHSGEQID--GSSAEGKDGEVLGADVDAVEADDEEDYEDEEDD

Query:  DSEEDSEKSSEKAA-EDRKGKGIVKVDKGKGKLIEEDDDDEDSSD--DDGSELGSDESDLSDDPLAEVDLDNILPSRTRRRAVHPGVYFATDLVNNDDDS
        D  E+ EKSS KAA EDRKGKGI+K DKGKGKLIEEDDDD+D  D  DDGSE  ++ESDLSDDPLAEVDLDNILPSRTRRR VHPGVYFATDL N DDDS
Subjt:  DSEEDSEKSSEKAA-EDRKGKGIVKVDKGKGKLIEEDDDDEDSSD--DDGSELGSDESDLSDDPLAEVDLDNILPSRTRRRAVHPGVYFATDLVNNDDDS

Query:  SDSDA
        SDSDA
Subjt:  SDSDA

A0A6J1K0H1 nucleolin-like7.8e-5370.73Show/hide
Query:  MAET-TSVDEVTFDAKRKP-DPGCEAKEERSSKIQKLEAVEEDSCDSV-KNGENGVHKHSGEQID--GSSAEGKDGEVLGADVDAVEADDEEDYEDEEDD
        MAET +S +E  FDAKRKP DP CEAKEERS+KIQKLE VE + C+ V KNG+NG HK   EQID   S+AEGKD  V  ADVDA   ++ EDY DE+D 
Subjt:  MAET-TSVDEVTFDAKRKP-DPGCEAKEERSSKIQKLEAVEEDSCDSV-KNGENGVHKHSGEQID--GSSAEGKDGEVLGADVDAVEADDEEDYEDEEDD

Query:  DSEEDSEKSSEKAAEDRKGKGIVKVDKGKGKLIEEDDDDED---SSDDDGSELGSDESDLSDDPLAEVDLDNILPSRTRRRAVHPGVYFATDLVNNDDDS
           E+ EKSS KAA+DRKGKGI+K DKGKGKLIEEDDDD+D    S DDGSE  ++ESDLSDDPLAEVDLDNILPSRTRRR VHPGVYFATDL N DDDS
Subjt:  DSEEDSEKSSEKAAEDRKGKGIVKVDKGKGKLIEEDDDDED---SSDDDGSELGSDESDLSDDPLAEVDLDNILPSRTRRRAVHPGVYFATDLVNNDDDS

Query:  SDSDA
        SDSDA
Subjt:  SDSDA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G12830.1 unknown protein3.0e-2545.45Show/hide
Query:  MAETTSVDEVTFDAKRKPDPGCEAKEERSSKIQK----LEAVEEDSCDSVKNGENGVH--KHSGEQIDGS--------SAEGKDGEVLGADVDAVEADDE
        MA+  +  + +F  KRK D  C+ ++  ++K QK    L + + +S D   NG   +     S E+  G+        +AE  +  V+G DV A E  ++
Subjt:  MAETTSVDEVTFDAKRKPDPGCEAKEERSSKIQK----LEAVEEDSCDSVKNGENGVH--KHSGEQIDGS--------SAEGKDGEVLGADVDAVEADDE

Query:  EDYEDEEDDDSEEDSEKSSEKAAEDRKGKGIVKVDKGKGKLIE-EDDDDEDSSDDDGSELG---SDESDLSDDPLAEVDLDNILPSRTRRRAVHPGVYFA
        ED EDEE+DD EE+ E+       DRKGKGI + DKGKGK+IE E+ DDED SDDD  + G    DESD SDDPLAEVDLDNILPSRTRRR+  PGV+  
Subjt:  EDYEDEEDDDSEEDSEKSSEKAAEDRKGKGIVKVDKGKGKLIE-EDDDDEDSSDDDGSELG---SDESDLSDDPLAEVDLDNILPSRTRRRAVHPGVYFA

Query:  TDLVN-----NDDDSSDSDA
         +  N      DD+SSDSDA
Subjt:  TDLVN-----NDDDSSDSDA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGAAACTACCAGCGTAGACGAGGTTACATTTGATGCGAAGCGCAAACCTGATCCCGGCTGTGAAGCGAAAGAGGAGCGTTCGAGCAAAATTCAGAAGCTCGAGGC
GGTTGAGGAAGATTCTTGTGATTCTGTGAAGAATGGTGAGAATGGAGTCCATAAGCATAGTGGTGAACAGATTGATGGCAGTTCTGCGGAAGGGAAAGACGGTGAAGTTC
TTGGAGCTGATGTTGATGCGGTTGAAGCAGATGATGAGGAGGATTACGAGGATGAAGAGGATGATGACAGTGAGGAGGATAGTGAGAAGTCGAGTGAGAAAGCGGCTGAG
GATCGTAAGGGAAAGGGAATCGTGAAGGTTGACAAAGGAAAGGGGAAATTGATTGAGGAAGATGACGATGATGAAGATTCCAGTGATGATGATGGAAGTGAATTAGGCTC
TGATGAGAGCGATTTGTCGGATGATCCCCTTGCGGAGGTAGATTTGGACAACATTCTTCCTTCGAGAACACGGAGGCGGGCTGTTCATCCCGGAGTTTATTTTGCTACTG
ATCTGGTGAACAATGACGATGATAGCAGTGATAGCGATGCGTAA
mRNA sequenceShow/hide mRNA sequence
CGAAAAAAAAAGTGATTTTCACCCGAATTTCCCCTTTTACCCCTTGGAAGGCTCGAAACAATTGGAACTGGAAATTGTGAATCGAAATTCTAGATCGTCGGTTGTTCGTC
CACTTCTATCAAAAACCCTAATTCGTTTCGTCGATTGATTCTGCAAATTAGGTCTCGAAGTTTCGAAGGTAGGATTCTGCGCCACGTTAATGGCGGAAACTACCAGCGTA
GACGAGGTTACATTTGATGCGAAGCGCAAACCTGATCCCGGCTGTGAAGCGAAAGAGGAGCGTTCGAGCAAAATTCAGAAGCTCGAGGCGGTTGAGGAAGATTCTTGTGA
TTCTGTGAAGAATGGTGAGAATGGAGTCCATAAGCATAGTGGTGAACAGATTGATGGCAGTTCTGCGGAAGGGAAAGACGGTGAAGTTCTTGGAGCTGATGTTGATGCGG
TTGAAGCAGATGATGAGGAGGATTACGAGGATGAAGAGGATGATGACAGTGAGGAGGATAGTGAGAAGTCGAGTGAGAAAGCGGCTGAGGATCGTAAGGGAAAGGGAATC
GTGAAGGTTGACAAAGGAAAGGGGAAATTGATTGAGGAAGATGACGATGATGAAGATTCCAGTGATGATGATGGAAGTGAATTAGGCTCTGATGAGAGCGATTTGTCGGA
TGATCCCCTTGCGGAGGTAGATTTGGACAACATTCTTCCTTCGAGAACACGGAGGCGGGCTGTTCATCCCGGAGTTTATTTTGCTACTGATCTGGTGAACAATGACGATG
ATAGCAGTGATAGCGATGCGTAAAACGAAACACGGAACGAGGAAGGTCAGTAGTATGTAGAACTAATGCGAGTTTGATAATTCTCAGTTTATCTTCTTTAGGGATTATGC
AGCAATGTAATGGATTTCCTTGAATTTCCTCATATATTTGATTTCGAAGGCTATGTTTTTTTCCTACTTTGATATCCGAAGCATTTAGGATTGCTTGCATCTGTGCTTTC
TTTAACATGCCCTTTTCTGAACAACATAGAATTAGAA
Protein sequenceShow/hide protein sequence
MAETTSVDEVTFDAKRKPDPGCEAKEERSSKIQKLEAVEEDSCDSVKNGENGVHKHSGEQIDGSSAEGKDGEVLGADVDAVEADDEEDYEDEEDDDSEEDSEKSSEKAAE
DRKGKGIVKVDKGKGKLIEEDDDDEDSSDDDGSELGSDESDLSDDPLAEVDLDNILPSRTRRRAVHPGVYFATDLVNNDDDSSDSDA