CuGenDBv2

Gene ID	Sed0007631
Organism	Sechium edule (Chayote v1)
Description	Vacuolar ATPase assembly integral membrane protein VMA21 homolog
Genome location	LG14:24611627..24615603
RNA-Seq Expression	Sed0007631
Synteny	Sed0007631
Gene Ontology terms	GO:0070072 - vacuolar proton-transporting V-type ATPase complex assembly (biological process) GO:0005789 - endoplasmic reticulum membrane (cellular component) GO:0012507 - ER to Golgi transport vesicle membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0033116 - endoplasmic reticulum-Golgi intermediate compartment membrane (cellular component)
InterPro domains	IPR019013 - Vacuolar ATPase assembly integral membrane protein Vma21

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004134542.1 uncharacterized protein LOC101206493 [Cucumis sativus]

9.0e-42

88.68

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Query:  MANVIMKFFIASLFMWITPIALLYGFNHNLFPGSKQLNPHSLTLLSGFLAVISVNVVIALYIIMALKEPARKHEPDPAFLAEAKASINQSTGKADDPSQA
        MANVIMKFFIASLFMWITPI LL+GFNHN  PGS QLNPHSLTLLSGFLAVISVNVVIA+YIIMA+KEP+ KHEPDP FLAEAKASINQSTGKAD PSQA
Subjt:  MANVIMKFFIASLFMWITPIALLYGFNHNLFPGSKQLNPHSLTLLSGFLAVISVNVVIALYIIMALKEPARKHEPDPAFLAEAKASINQSTGKADDPSQA

Query:  NNKKEE
         NKKEE
Subjt:  NNKKEE

XP_022146488.1 uncharacterized protein LOC111015696 [Momordica charantia]

1.2e-41

88.57

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Query:  MANVIMKFFIASLFMWITPIALLYGFNHNLFPGSKQLNPHSLTLLSGFLAVISVNVVIALYIIMALKEPARKHEPDPAFLAEAKASINQSTGKADDPSQA
        MA+VIMKFF ASLFMWITPIALLYGFNHNL PGS QLNPHSLTLLSGFLAVISVNVVIA+YIIMA+KEPA KHEPDPAFLAEAKASINQS G+ADDPSQA
Subjt:  MANVIMKFFIASLFMWITPIALLYGFNHNLFPGSKQLNPHSLTLLSGFLAVISVNVVIALYIIMALKEPARKHEPDPAFLAEAKASINQSTGKADDPSQA

Query:  NNKKE
        N K++
Subjt:  NNKKE

XP_022926009.1 uncharacterized protein LOC111433255 [Cucurbita moschata]

5.3e-42

88.68

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Query:  MANVIMKFFIASLFMWITPIALLYGFNHNLFPGSKQLNPHSLTLLSGFLAVISVNVVIALYIIMALKEPARKHEPDPAFLAEAKASINQSTGKADDPSQA
        MA VI KFFIASLFMWITPI LLYGFNHNL PGS QLNPHSLTLLSGFLAVISVNVVIA+YIIMA+KEP+ KHEPDPAF+AEAKASINQS GKA+DPSQA
Subjt:  MANVIMKFFIASLFMWITPIALLYGFNHNLFPGSKQLNPHSLTLLSGFLAVISVNVVIALYIIMALKEPARKHEPDPAFLAEAKASINQSTGKADDPSQA

Query:  NNKKEE
        NNKKEE
Subjt:  NNKKEE

XP_022977993.1 uncharacterized protein LOC111478118 [Cucurbita maxima]

4.5e-41

86.79

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Query:  MANVIMKFFIASLFMWITPIALLYGFNHNLFPGSKQLNPHSLTLLSGFLAVISVNVVIALYIIMALKEPARKHEPDPAFLAEAKASINQSTGKADDPSQA
        MA VI KFFIASLFMWITPI LLYGFNHNL PGS  LNPHSLTLLSGFLAVISVNVVIA+YIIMA+KEP+ KHEPDPAF+AEAKASINQ+ GKA+DPSQA
Subjt:  MANVIMKFFIASLFMWITPIALLYGFNHNLFPGSKQLNPHSLTLLSGFLAVISVNVVIALYIIMALKEPARKHEPDPAFLAEAKASINQSTGKADDPSQA

Query:  NNKKEE
        NNKKEE
Subjt:  NNKKEE

XP_038882777.1 protein SUPPRESSOR OF FRI 4-like isoform X1 [Benincasa hispida]

5.8e-41

86.79

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Query:  MANVIMKFFIASLFMWITPIALLYGFNHNLFPGSKQLNPHSLTLLSGFLAVISVNVVIALYIIMALKEPARKHEPDPAFLAEAKASINQSTGKADDPSQA
        MA+VI KFFIASLFMWITPIALLYGFNHNL PGS QLNPHSLTLLSGFLAVISVNVVIA+YIIMA+KEP+ KHEPDPAFL EAKASINQS GK ++PSQA
Subjt:  MANVIMKFFIASLFMWITPIALLYGFNHNLFPGSKQLNPHSLTLLSGFLAVISVNVVIALYIIMALKEPARKHEPDPAFLAEAKASINQSTGKADDPSQA

Query:  NNKKEE
        +NKKEE
Subjt:  NNKKEE

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KPB7 Vacuolar ATPase assembly integral membrane protein VMA21 homolog

4.4e-42

88.68

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Query:  MANVIMKFFIASLFMWITPIALLYGFNHNLFPGSKQLNPHSLTLLSGFLAVISVNVVIALYIIMALKEPARKHEPDPAFLAEAKASINQSTGKADDPSQA
        MANVIMKFFIASLFMWITPI LL+GFNHN  PGS QLNPHSLTLLSGFLAVISVNVVIA+YIIMA+KEP+ KHEPDP FLAEAKASINQSTGKAD PSQA
Subjt:  MANVIMKFFIASLFMWITPIALLYGFNHNLFPGSKQLNPHSLTLLSGFLAVISVNVVIALYIIMALKEPARKHEPDPAFLAEAKASINQSTGKADDPSQA

Query:  NNKKEE
         NKKEE
Subjt:  NNKKEE

A0A1S4DTT6 Vacuolar ATPase assembly integral membrane protein VMA21 homolog

1.1e-40

85.85

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Query:  MANVIMKFFIASLFMWITPIALLYGFNHNLFPGSKQLNPHSLTLLSGFLAVISVNVVIALYIIMALKEPARKHEPDPAFLAEAKASINQSTGKADDPSQA
        MANVI KFFIASLFMWITPI LL+GFNHN  PGS +LNPHSLTLLSGFLAVISVNVVI +YIIMA+KEP+ KHEPDPAFLAEAKASINQSTGKAD PS+A
Subjt:  MANVIMKFFIASLFMWITPIALLYGFNHNLFPGSKQLNPHSLTLLSGFLAVISVNVVIALYIIMALKEPARKHEPDPAFLAEAKASINQSTGKADDPSQA

Query:  NNKKEE
        +NKKEE
Subjt:  NNKKEE

A0A6J1CYA2 Vacuolar ATPase assembly integral membrane protein VMA21 homolog

5.7e-42

88.57

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Query:  MANVIMKFFIASLFMWITPIALLYGFNHNLFPGSKQLNPHSLTLLSGFLAVISVNVVIALYIIMALKEPARKHEPDPAFLAEAKASINQSTGKADDPSQA
        MA+VIMKFF ASLFMWITPIALLYGFNHNL PGS QLNPHSLTLLSGFLAVISVNVVIA+YIIMA+KEPA KHEPDPAFLAEAKASINQS G+ADDPSQA
Subjt:  MANVIMKFFIASLFMWITPIALLYGFNHNLFPGSKQLNPHSLTLLSGFLAVISVNVVIALYIIMALKEPARKHEPDPAFLAEAKASINQSTGKADDPSQA

Query:  NNKKE
        N K++
Subjt:  NNKKE

A0A6J1EJT7 Vacuolar ATPase assembly integral membrane protein VMA21 homolog

2.6e-42

88.68

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Query:  MANVIMKFFIASLFMWITPIALLYGFNHNLFPGSKQLNPHSLTLLSGFLAVISVNVVIALYIIMALKEPARKHEPDPAFLAEAKASINQSTGKADDPSQA
        MA VI KFFIASLFMWITPI LLYGFNHNL PGS QLNPHSLTLLSGFLAVISVNVVIA+YIIMA+KEP+ KHEPDPAF+AEAKASINQS GKA+DPSQA
Subjt:  MANVIMKFFIASLFMWITPIALLYGFNHNLFPGSKQLNPHSLTLLSGFLAVISVNVVIALYIIMALKEPARKHEPDPAFLAEAKASINQSTGKADDPSQA

Query:  NNKKEE
        NNKKEE
Subjt:  NNKKEE

A0A6J1ISV9 Vacuolar ATPase assembly integral membrane protein VMA21 homolog

2.2e-41

86.79

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Query:  MANVIMKFFIASLFMWITPIALLYGFNHNLFPGSKQLNPHSLTLLSGFLAVISVNVVIALYIIMALKEPARKHEPDPAFLAEAKASINQSTGKADDPSQA
        MA VI KFFIASLFMWITPI LLYGFNHNL PGS  LNPHSLTLLSGFLAVISVNVVIA+YIIMA+KEP+ KHEPDPAF+AEAKASINQ+ GKA+DPSQA
Subjt:  MANVIMKFFIASLFMWITPIALLYGFNHNLFPGSKQLNPHSLTLLSGFLAVISVNVVIALYIIMALKEPARKHEPDPAFLAEAKASINQSTGKADDPSQA

Query:  NNKKEE
        NNKKEE
Subjt:  NNKKEE

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G05780.1 Vacuolar ATPase assembly integral membrane protein VMA21-like domain

1.7e-30

65.09

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Query:  MANVIMKFFIASLFMWITPIALLYGFNHNLFPGSKQLNPHSLTLLSGFLAVISVNVVIALYIIMALKEPARKHEPDPAFLAEAKASINQSTGKADDPSQA
        MA V+ KF IAS+FMWI P+A+LYGFNHNL PGS  L+PHSL LLSGFLAV+SVN VI  YI MA+KEPA KH+PD AFLAEAK S+N+ T  A      
Subjt:  MANVIMKFFIASLFMWITPIALLYGFNHNLFPGSKQLNPHSLTLLSGFLAVISVNVVIALYIIMALKEPARKHEPDPAFLAEAKASINQSTGKADDPSQA

Query:  NNKKEE
          KK+E
Subjt:  NNKKEE

AT2G31710.1 Vacuolar ATPase assembly integral membrane protein VMA21-like domain

3.2e-29

62.86

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Query:  MANVIMKFFIASLFMWITPIALLYGFNHNLFPGSKQLNPHSLTLLSGFLAVISVNVVIALYIIMALKEPARKHEPDPAFLAEAKASINQSTGKADDPSQA
        MA V+ KF IAS+FMWI PIA+LYGFN++L PGS  L+PHSLTLLSGFLAV+SVNVVI  YI +ALKEPA KH+PD +F+AEAK S+ + T    +   A
Subjt:  MANVIMKFFIASLFMWITPIALLYGFNHNLFPGSKQLNPHSLTLLSGFLAVISVNVVIALYIIMALKEPARKHEPDPAFLAEAKASINQSTGKADDPSQA

Query:  NNKKE
          K+E
Subjt:  NNKKE

Sequences

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CDS sequence

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ATGGCGAACGTCATTATGAAGTTCTTCATTGCATCACTGTTTATGTGGATAACTCCCATCGCTTTGCTATATGGTTTTAACCACAATTTGTTTCCTGGTTCAAAACAATT
GAATCCACATTCCCTTACACTCTTGAGTGGATTCCTAGCCGTCATATCAGTCAACGTTGTCATTGCCCTTTATATTATAATGGCTTTGAAAGAACCTGCTCGGAAACACG
AACCGGATCCTGCATTTCTTGCCGAGGCAAAAGCTAGTATAAACCAGTCGACTGGAAAAGCTGACGATCCGTCGCAAGCTAATAATAAGAAGGAAGAATAG

mRNA sequence

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CTTTAACTCGAAATAAAAAATATATTCGAAAAACTTTTACATAATTTAGTAAACCCCATATGAACAGAACCCTTGTTCCTCCTCATCTCTGGTTCCATTTCGAAATCGTC
CGAATCTGAATCGAAATCTCTCATCGCTCCTTATTCTTTCTCTTCTGAATCGAAACTGTATTTGAAGCCCCAATTCGGAACTTAGAAACCCTAGTTCGTGGTCCGAATCT
GCAATCGGAGAAACTGAAATCCATCCTCAAGTTCAATTGTGAATCTTCATTTTTTGTATCCATGGCAATGCAAATTCAATTGTGAATCTTCATTTAAGACATTGTTTGCA
AACTAAAGATACCTATGGCGAACGTCATTATGAAGTTCTTCATTGCATCACTGTTTATGTGGATAACTCCCATCGCTTTGCTATATGGTTTTAACCACAATTTGTTTCCT
GGTTCAAAACAATTGAATCCACATTCCCTTACACTCTTGAGTGGATTCCTAGCCGTCATATCAGTCAACGTTGTCATTGCCCTTTATATTATAATGGCTTTGAAAGAACC
TGCTCGGAAACACGAACCGGATCCTGCATTTCTTGCCGAGGCAAAAGCTAGTATAAACCAGTCGACTGGAAAAGCTGACGATCCGTCGCAAGCTAATAATAAGAAGGAAG
AATAGGAAACGGAGAGAAAGAGAGGCTTTGATGAGGAATGCTTTCAAGTTTCAAGCTTAATCTTCCTGGATTTGAGAAGAAAATCAGTCTCATGTGATTATGTTTATGTT
TCTTCTCTAGTTTTGTTTTATTAAGATAGATTCTGCATTACCTTTAACTTGAGTTTTGAAGGTATGCTCCCTTCAAAGTCTCAATTTGAAATTCACCTATGACATTACTC
CTTCGATGTCTCCAGTACCTGGCTTGGGACGGGTGTGGTTATCCTTATTTCAAAAAAAATTAAGATAGATTCTGCATTTAGATTTGATCTTTTTATCTACGGGTGATGTT
CTTCATTTTGTGTTGTCAACTCCTTGGAGAGACTTAAAATAAATTTTAGATTCTTGCATTTCTG

Protein sequence

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MANVIMKFFIASLFMWITPIALLYGFNHNLFPGSKQLNPHSLTLLSGFLAVISVNVVIALYIIMALKEPARKHEPDPAFLAEAKASINQSTGKADDPSQANNKKEE

Sed0007631 (gene) of Chayote v1 genome