CuGenDBv2

Gene ID	Sed0007654
Organism	Sechium edule (Chayote v1)
Description	GATA transcription factor-like protein
Genome location	LG07:4138516..4140871
RNA-Seq Expression	Sed0007654
Synteny	Sed0007654
Gene Ontology terms	NA
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6575793.1 hypothetical protein SDJN03_26432, partial [Cucurbita argyrosperma subsp. sororia]

3.0e-78

68.07

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Query:  MHSKLRAIAPSSNWAFLAAQFRGLRR-GLTTRRTADPAVHANDDNDPAVLSGEPDISKDNLEPDNAKTDYERDEANE-----------AQYASSPRFETT
        M S+L AIA   NW F  AQF+ LRR GLTT RTADP+VHANDDN PAV SGEP+ S+DNLEPD+AK++YERD++ +           AQYASSPR ETT
Subjt:  MHSKLRAIAPSSNWAFLAAQFRGLRR-GLTTRRTADPAVHANDDNDPAVLSGEPDISKDNLEPDNAKTDYERDEANE-----------AQYASSPRFETT

Query:  PVGQASKPITEQKRAHNTVIDNVSCIGVYGGPLSGEKENKETDFKEQEEDDMEYYKHRKASPLAEIEVAETRKPITVATDSTADE--GNDVIGWLPEQLD
        PV QASKPIT+QKRAH+TV+D+VSCIG  GGP   E++N+  D KEQE+D+ EYYKH KASPLAEIE  +TRKPIT ATD TA +  G DVIGWLPEQ D
Subjt:  PVGQASKPITEQKRAHNTVIDNVSCIGVYGGPLSGEKENKETDFKEQEEDDMEYYKHRKASPLAEIEVAETRKPITVATDSTADE--GNDVIGWLPEQLD

Query:  TEKDSLERAREIWKENAMRGDPDAPQSKVLRALRGEDF
        T  DSL+RA EIWK+NAMRGDPDAPQS+VLRALRGE F
Subjt:  TEKDSLERAREIWKENAMRGDPDAPQSKVLRALRGEDF

KAG7014335.1 hypothetical protein SDJN02_24512 [Cucurbita argyrosperma subsp. argyrosperma]

2.3e-78

68.49

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Query:  MHSKLRAIAPSSNWAFLAAQFRGLRR-GLTTRRTADPAVHANDDNDPAVLSGEPDISKDNLEPDNAKTDYERDEANE-----------AQYASSPRFETT
        M S+L AIA   NW F  AQF+ LRR GLTT RTADP+VHANDDN PAV SGEP+ S+DNLEPD+AK++YERD++ +           AQYASSPR ETT
Subjt:  MHSKLRAIAPSSNWAFLAAQFRGLRR-GLTTRRTADPAVHANDDNDPAVLSGEPDISKDNLEPDNAKTDYERDEANE-----------AQYASSPRFETT

Query:  PVGQASKPITEQKRAHNTVIDNVSCIGVYGGPLSGEKENKETDFKEQEEDDMEYYKHRKASPLAEIEVAETRKPITVATDSTADE--GNDVIGWLPEQLD
        PV QASKPIT+QKRAH+TV+ +VSCIG  GGP   E++N+E D KEQEED  EYYKH KASPLAEIE  +TRKPIT ATD TA +  G DVIGWLPEQ D
Subjt:  PVGQASKPITEQKRAHNTVIDNVSCIGVYGGPLSGEKENKETDFKEQEEDDMEYYKHRKASPLAEIEVAETRKPITVATDSTADE--GNDVIGWLPEQLD

Query:  TEKDSLERAREIWKENAMRGDPDAPQSKVLRALRGEDF
        T  DSL+RA EIWK+NAMRGDPDAPQS+VLRALRGE F
Subjt:  TEKDSLERAREIWKENAMRGDPDAPQSKVLRALRGEDF

XP_023548846.1 uncharacterized protein LOC111807374 [Cucurbita pepo subsp. pepo]

1.4e-78

68.49

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Query:  MHSKLRAIAPSSNWAFLAAQFRGLRR-GLTTRRTADPAVHANDDNDPAVLSGEPDISKDNLEPDNAKTDYERDEANE-----------AQYASSPRFETT
        M S+L AIA   NW+F  AQF+ LRR GLTT RTADP+VHANDDN PAV SGEP+ S+DNLEPD+AK +YERD++ +           AQYASSPR ETT
Subjt:  MHSKLRAIAPSSNWAFLAAQFRGLRR-GLTTRRTADPAVHANDDNDPAVLSGEPDISKDNLEPDNAKTDYERDEANE-----------AQYASSPRFETT

Query:  PVGQASKPITEQKRAHNTVIDNVSCIGVYGGPLSGEKENKETDFKEQEEDDMEYYKHRKASPLAEIEVAETRKPITVATDSTADE--GNDVIGWLPEQLD
        PV QASKPIT+QKRAH+TV+ +VSCIG  GGP   E++N+E D KEQEED+ EYYKH KASPLAEIE  +TRKPIT ATD TA +  G DVIGWLPEQ D
Subjt:  PVGQASKPITEQKRAHNTVIDNVSCIGVYGGPLSGEKENKETDFKEQEEDDMEYYKHRKASPLAEIEVAETRKPITVATDSTADE--GNDVIGWLPEQLD

Query:  TEKDSLERAREIWKENAMRGDPDAPQSKVLRALRGEDF
        T  DSL RA+EIWK+NAMRGDPDAPQS+VLRALRGE F
Subjt:  TEKDSLERAREIWKENAMRGDPDAPQSKVLRALRGEDF

XP_038899333.1 uncharacterized protein LOC120086662 isoform X1 [Benincasa hispida]

8.5e-81

69.75

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Query:  MHSKLRAIAPSSNWAFLAAQFRGLRR-GLTTRRTADPAVHANDDNDPAVLSGEPDISKDNLEPDNAKTDYERDEAN-----------EAQYASSPRFETT
        M S+L AIAP SNWA   AQF+ LRR  LTTRRTADP+VHANDDNDPAVLSGEP+ S+DNLEPDN K +YER +             +AQ+ASSPR ET 
Subjt:  MHSKLRAIAPSSNWAFLAAQFRGLRR-GLTTRRTADPAVHANDDNDPAVLSGEPDISKDNLEPDNAKTDYERDEAN-----------EAQYASSPRFETT

Query:  PVGQASKPITEQKRAHNTVIDNVSCIGVYGGPLSGEKENKETDFKEQEEDDMEYYKHRKASPLAEIEVAETRKPITVATDSTA--DEGNDVIGWLPEQLD
         VGQASKPIT+QKR  +TV D VSCIGVYGGPL   KEN+ T+ KEQEED+ +YYKH KASPLAEIE A+TRKPIT ATD TA   +G DVIGWLPEQLD
Subjt:  PVGQASKPITEQKRAHNTVIDNVSCIGVYGGPLSGEKENKETDFKEQEEDDMEYYKHRKASPLAEIEVAETRKPITVATDSTA--DEGNDVIGWLPEQLD

Query:  TEKDSLERAREIWKENAMRGDPDAPQSKVLRALRGEDF
        T  DSL RA EIWK+NAMRGDPDAPQS++LRALRGE F
Subjt:  TEKDSLERAREIWKENAMRGDPDAPQSKVLRALRGEDF

XP_038899334.1 uncharacterized protein LOC120086662 isoform X2 [Benincasa hispida]

8.0e-79

69.33

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Query:  MHSKLRAIAPSSNWAFLAAQFRGLRR-GLTTRRTADPAVHANDDNDPAVLSGEPDISKDNLEPDNAKTDYERDEAN-----------EAQYASSPRFETT
        M S+L AIAP SNWA   AQF+ LRR  LTTRRTADP+VHANDDNDPAVLSGEP+   DNLEPDN K +YER +             +AQ+ASSPR ET 
Subjt:  MHSKLRAIAPSSNWAFLAAQFRGLRR-GLTTRRTADPAVHANDDNDPAVLSGEPDISKDNLEPDNAKTDYERDEAN-----------EAQYASSPRFETT

Query:  PVGQASKPITEQKRAHNTVIDNVSCIGVYGGPLSGEKENKETDFKEQEEDDMEYYKHRKASPLAEIEVAETRKPITVATDSTA--DEGNDVIGWLPEQLD
         VGQASKPIT+QKR  +TV D VSCIGVYGGPL   KEN+ T+ KEQEED+ +YYKH KASPLAEIE A+TRKPIT ATD TA   +G DVIGWLPEQLD
Subjt:  PVGQASKPITEQKRAHNTVIDNVSCIGVYGGPLSGEKENKETDFKEQEEDDMEYYKHRKASPLAEIEVAETRKPITVATDSTA--DEGNDVIGWLPEQLD

Query:  TEKDSLERAREIWKENAMRGDPDAPQSKVLRALRGEDF
        T  DSL RA EIWK+NAMRGDPDAPQS++LRALRGE F
Subjt:  TEKDSLERAREIWKENAMRGDPDAPQSKVLRALRGEDF

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K9G7 Uncharacterized protein

3.9e-79

63.74

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Query:  LISTSYLYFNKQNQNF--PRRRVPNQNRDMHSKLRAIAPSSNWAFLAAQFRGLRRG---LTTRRTADPAVHAN---DDNDPAVLSGEPDISKDNLEPDNA
        ++  S L+ NK N     P   V  +   M S LRAIAP SNWAF   QF+ LRRG   LTT RTADP++HAN   DDNDPAVLSGEP+ S+DNLEPDNA
Subjt:  LISTSYLYFNKQNQNF--PRRRVPNQNRDMHSKLRAIAPSSNWAFLAAQFRGLRRG---LTTRRTADPAVHAN---DDNDPAVLSGEPDISKDNLEPDNA

Query:  KTDYE-RDEANE-----------AQYASSPRFETTPVGQASKPITEQKRAHNTVIDNVSCIGVYGGPLSGEKENKETDFKEQEEDDMEYYKHRKASPLAE
        K +Y+ RD+  +           AQ+ASSPR ETT VGQASKPIT+QKRAH+  ID+VSCIGVYGGPL   KEN+ T+ KE+EED+ +YYKH KASPLAE
Subjt:  KTDYE-RDEANE-----------AQYASSPRFETTPVGQASKPITEQKRAHNTVIDNVSCIGVYGGPLSGEKENKETDFKEQEEDDMEYYKHRKASPLAE

Query:  IEVAETRKPITVATDSTADEGND--VIGWLPEQLDTEKDSLERAREIWKENAMRGDPDAPQSKVLRALRGEDF
        IE A+TRKPIT ATD TA +G    VIGWLPEQ+DT  DSL RA EIWK+NAMRGDPDAPQS+VLRALRGE+F
Subjt:  IEVAETRKPITVATDSTADEGND--VIGWLPEQLDTEKDSLERAREIWKENAMRGDPDAPQSKVLRALRGEDF

A0A1S3BR22 uncharacterized protein LOC103492778

1.9e-78

66.8

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Query:  MHSKLRAIAPSSNWAFLAAQFRGLRR-GLTTRRTADPAVHANDD--NDPAVLSGEPDISKDNLEPDNAKTDYE-RDE-----------ANEAQYASSPRF
        M S+LRAIAP SNWA    QF+GLRR GLTT RTADP+VHANDD  NDP+VLSGEP+ S+DNLEPDNAK +YE RD+            ++AQ+ASSPR 
Subjt:  MHSKLRAIAPSSNWAFLAAQFRGLRR-GLTTRRTADPAVHANDD--NDPAVLSGEPDISKDNLEPDNAKTDYE-RDE-----------ANEAQYASSPRF

Query:  ETTPVGQASKPITEQKRAHNTVIDNVSCIGVYGGPLSGEKENKETDFKEQE---------EDDMEYYKHRKASPLAEIEVAETRKPITVATDSTAD--EG
        ETT VGQASKPIT+QKRAH+  ID+VSCIGVYGGPL   KE++ T+ K++E         ED+ +YYKH KASPLAEIE  +TRKPIT ATD TAD  +G
Subjt:  ETTPVGQASKPITEQKRAHNTVIDNVSCIGVYGGPLSGEKENKETDFKEQE---------EDDMEYYKHRKASPLAEIEVAETRKPITVATDSTAD--EG

Query:  NDVIGWLPEQLDTEKDSLERAREIWKENAMRGDPDAPQSKVLRALRGEDF
          VIGWLPEQ+DT  DSL RA EIWK+NAMRGDPDAPQS+VLRALRGEDF
Subjt:  NDVIGWLPEQLDTEKDSLERAREIWKENAMRGDPDAPQSKVLRALRGEDF

A0A5D3D3D5 Uncharacterized protein

7.3e-78

66.67

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Query:  MHSKLRAIAPSSNWAFLAAQFRGLRR-GLTTRRTADPAVHANDD--NDPAVLSGEPDISKDNLEPDNAKTDYE-RDE-----------ANEAQYASSPRF
        M S+LRAIAP SNWA    Q +GLRR GLTT RTADP+VHANDD  NDP+VLSGEP+ S+DNLEPDNAK +YE RD+            ++AQ+ASSPR 
Subjt:  MHSKLRAIAPSSNWAFLAAQFRGLRR-GLTTRRTADPAVHANDD--NDPAVLSGEPDISKDNLEPDNAKTDYE-RDE-----------ANEAQYASSPRF

Query:  ETTPVGQASKPITEQKRAHNTVIDNVSCIGVYGGPLSGEKENKETDFKEQE--------EDDMEYYKHRKASPLAEIEVAETRKPITVATDSTAD--EGN
        ETT VGQASKPIT+QKRAH+  ID+VSCIGVYGGPL   KE++ T+ K++E        ED+ +YYKH KASPLAEIE  +TRKPIT ATD TAD  +G 
Subjt:  ETTPVGQASKPITEQKRAHNTVIDNVSCIGVYGGPLSGEKENKETDFKEQE--------EDDMEYYKHRKASPLAEIEVAETRKPITVATDSTAD--EGN

Query:  DVIGWLPEQLDTEKDSLERAREIWKENAMRGDPDAPQSKVLRALRGEDF
         VIGWLPEQ+DT  DSL RA EIWK+NAMRGDPDAPQS+VLRALRGEDF
Subjt:  DVIGWLPEQLDTEKDSLERAREIWKENAMRGDPDAPQSKVLRALRGEDF

A0A6J1GPT4 uncharacterized protein LOC111456388

9.5e-78

67.23

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Query:  MHSKLRAIAPSSNWAFLAAQFRGLRR-GLTTRRTADPAVHANDDNDPAVLSGEPDISKDNLEPDNAKTDYERDEANE-----------AQYASSPRFETT
        M S+L AIA   NW F  AQF+ LRR GLTT RTADP+VHANDDN PAV SGEP+ S+DNLEPD+AK++YERD++ +           AQYASSPR ETT
Subjt:  MHSKLRAIAPSSNWAFLAAQFRGLRR-GLTTRRTADPAVHANDDNDPAVLSGEPDISKDNLEPDNAKTDYERDEANE-----------AQYASSPRFETT

Query:  PVGQASKPITEQKRAHNTVIDNVSCIGVYGGPLSGEKENKETDFKEQEEDDMEYYKHRKASPLAEIEVAETRKPITVATDSTADE--GNDVIGWLPEQLD
        PV QASKPIT+QKRAH+TV+ +VSCIG  GGP   E++N+E D KEQ++D+ EYYKH KASPLAEIE  +TRKPIT ATD TA +  G D+IGWLPEQ D
Subjt:  PVGQASKPITEQKRAHNTVIDNVSCIGVYGGPLSGEKENKETDFKEQEEDDMEYYKHRKASPLAEIEVAETRKPITVATDSTADE--GNDVIGWLPEQLD

Query:  TEKDSLERAREIWKENAMRGDPDAPQSKVLRALRGEDF
        T  DSL+RA EIWK+NAMRGDPDAPQS+VLRALRGE F
Subjt:  TEKDSLERAREIWKENAMRGDPDAPQSKVLRALRGEDF

A0A6J1JL82 uncharacterized protein LOC111487953

1.0e-76

68.07

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Query:  MHSKLRAIAPSSNWAFLAAQFRGLRR-GLTTRRTADPAVHANDDNDPAVLSGEPDISKDNLEPDNAKTDYERDEANE-----------AQYASSPRFETT
        M S+L AIA   NWAF  AQF+ LRR GLTT RTADP+VHANDDN PAV SGEP+ S+DNLEPD AK +Y  D++ +           AQYASSPR ETT
Subjt:  MHSKLRAIAPSSNWAFLAAQFRGLRR-GLTTRRTADPAVHANDDNDPAVLSGEPDISKDNLEPDNAKTDYERDEANE-----------AQYASSPRFETT

Query:  PVGQASKPITEQKRAHNTVIDNVSCIGVYGGPLSGEKENKETDFKEQEEDDMEYYKHRKASPLAEIEVAETRKPITVATDSTADE--GNDVIGWLPEQLD
        PV QASKPIT+QKRAH+TV+ +VSCIG  GGP   E++N+E D KEQEED+ EYYKH KASPLAEIE A+TRKPIT ATD TA +  G DVI WLPEQ D
Subjt:  PVGQASKPITEQKRAHNTVIDNVSCIGVYGGPLSGEKENKETDFKEQEEDDMEYYKHRKASPLAEIEVAETRKPITVATDSTADE--GNDVIGWLPEQLD

Query:  TEKDSLERAREIWKENAMRGDPDAPQSKVLRALRGEDF
        T  DSL RA EIWK+NAMRGDPDAPQS+VLRALRGE F
Subjt:  TEKDSLERAREIWKENAMRGDPDAPQSKVLRALRGEDF

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G02700.1 unknown protein

1.2e-37

44.08

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Query:  MHSKLRAIAPSSNWAFLAAQFRGLRRGLTTR-RTADPAVHA-NDDNDPAVLSGEPDISKDNLEPDNAKTDYERDEAN-----------EAQYASSPRFET
        M S+L A A ++         R L  G +T  RTADP +HA ND  DPA+   +P+   D   P  A  +   D              ++  A++ + E+
Subjt:  MHSKLRAIAPSSNWAFLAAQFRGLRRGLTTR-RTADPAVHA-NDDNDPAVLSGEPDISKDNLEPDNAKTDYERDEAN-----------EAQYASSPRFET

Query:  TPVGQASKPITEQKRAHNTV----IDNVSCIGVYGGPL-SGEKENKETDFKEQE-EDDMEYYKHRKASPLAEIEVAETRKPITVATDSTA-DEGNDVIGW
        TPVG  S+P  +QKR ++T     +D+VSC G+ G P    E E +E   +E E E D E+YKH KASPL+EIE A+TRKPIT ATD TA   G DVIGW
Subjt:  TPVGQASKPITEQKRAHNTV----IDNVSCIGVYGGPL-SGEKENKETDFKEQE-EDDMEYYKHRKASPLAEIEVAETRKPITVATDSTA-DEGNDVIGW

Query:  LPEQLDTEKDSLERAREIWKENAMRGDPDA-PQSKVLRALRGEDF
        LPEQLDT ++SL +A  I+K NA RGDP+  P S++LR +RGE F
Subjt:  LPEQLDTEKDSLERAREIWKENAMRGDPDA-PQSKVLRALRGEDF

Sequences

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CDS sequence

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ATGAAATTTAAGCCTACAACAACTACCTTACTCTACCTCTTTCCTTATTTGATATCTACCTCTTACTTATATTTTAATAAGCAAAATCAAAATTTCCCCCGCCGAAGAGT
CCCAAATCAAAACAGAGATATGCATTCCAAATTGAGGGCGATCGCACCCAGCTCCAATTGGGCCTTTTTGGCGGCCCAATTCCGAGGCCTCCGGCGAGGTCTGACGACAC
GTCGGACCGCTGACCCTGCCGTTCACGCCAATGACGACAACGACCCGGCCGTTTTATCCGGTGAACCCGATATATCAAAGGATAATTTAGAGCCAGATAATGCAAAAACC
GATTACGAAAGGGACGAAGCTAATGAGGCCCAATACGCATCATCCCCTAGATTCGAAACGACGCCCGTGGGCCAGGCCTCGAAGCCCATTACTGAACAAAAGAGAGCCCA
CAATACAGTGATCGACAACGTGAGCTGCATTGGCGTCTACGGTGGTCCGTTGTCGGGCGAGAAAGAAAACAAAGAGACAGACTTCAAAGAACAGGAAGAAGACGACATGG
AATACTACAAGCACCGGAAGGCGTCCCCGTTAGCCGAGATTGAGGTTGCGGAAACACGGAAACCGATAACCGTGGCGACCGACTCGACGGCGGACGAGGGAAACGATGTG
ATCGGGTGGTTGCCGGAGCAGTTGGATACTGAGAAGGATTCACTCGAGAGAGCTAGGGAGATTTGGAAGGAAAATGCCATGCGTGGGGATCCTGATGCCCCTCAATCCAA
GGTACTTCGTGCTTTGCGTGGTGAAGACTTCTAA

mRNA sequence

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Protein sequence

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MKFKPTTTTLLYLFPYLISTSYLYFNKQNQNFPRRRVPNQNRDMHSKLRAIAPSSNWAFLAAQFRGLRRGLTTRRTADPAVHANDDNDPAVLSGEPDISKDNLEPDNAKT
DYERDEANEAQYASSPRFETTPVGQASKPITEQKRAHNTVIDNVSCIGVYGGPLSGEKENKETDFKEQEEDDMEYYKHRKASPLAEIEVAETRKPITVATDSTADEGNDV
IGWLPEQLDTEKDSLERAREIWKENAMRGDPDAPQSKVLRALRGEDF

Sed0007654 (gene) of Chayote v1 genome