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Sed0007680 (gene) of Chayote v1 genome

Gene IDSed0007680
OrganismSechium edule (Chayote v1)
DescriptionDirigent protein
Genome locationLG08:1777006..1777483
RNA-Seq ExpressionSed0007680
SyntenySed0007680
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058015.1 dirigent protein 22-like [Cucumis melo var. makuwa]9.5e-1544.69Show/hide
Query:  MAASCKIPLISMAILEAVRLIEALNPN-----------VSGPNAAAIQAAVWRTNCTASDPIAAVFRSVFMTDTPFTAAPELNTT---------------
        MA S KI +ISMAIL AVR IEAL+PN           VSGPN  AIQ A  +TN T +DPIAA+F SVFM D P T  PELN+T               
Subjt:  MAASCKIPLISMAILEAVRLIEALNPN-----------VSGPNAAAIQAAVWRTNCTASDPIAAVFRSVFMTDTPFTAAPELNTT---------------

Query:  ----LLMSLTFARSGGPTTAAHSASAAESD-----RERS-PGNAGRRRDV-GFLAGLTRTFSFREMDAT-GKNVTLIYE
            LLM+LTF   GG    +  +    +      RE    G  G  R V G+   L RT+SFR MDA  G NVTLI++
Subjt:  ----LLMSLTFARSGGPTTAAHSASAAESD-----RERS-PGNAGRRRDV-GFLAGLTRTFSFREMDAT-GKNVTLIYE

KAG6589590.1 Dirigent protein 15, partial [Cucurbita argyrosperma subsp. sororia]7.3e-0740.94Show/hide
Query:  MAASCKIPLISMAILEAVRLIEALNPN-----------VSGPNAAAIQAAVWRTNCTASDPIAAVFRSVFMTDTPFTAAPELNTTL-------LMSLTFA
        MAAS KI LISMAIL    ++EALN N           VSGPN   IQ A  RTN T SDPIAA+F S+FM D P T AP L   +       L ++   
Subjt:  MAASCKIPLISMAILEAVRLIEALNPN-----------VSGPNAAAIQAAVWRTNCTASDPIAAVFRSVFMTDTPFTAAPELNTTL-------LMSLTFA

Query:  RSGGPTTAAH-------------SASAAESDRERSPGNAGRRRDVGFLA
        +   P   A+                  ES  ER+PGNA  R D  F A
Subjt:  RSGGPTTAAH-------------SASAAESDRERSPGNAGRRRDVGFLA

KAG7023279.1 Dirigent protein 15, partial [Cucurbita argyrosperma subsp. argyrosperma]2.5e-0741.61Show/hide
Query:  MAASCKIPLISMAILEAVRLIEALNPN-----------VSGPNAAAIQAAVWRTNCTASDPIAAVFRSVFMTDTPFTAAPELNTTL-------LMSLTFA
        MAAS KI LISMAIL    ++EALN N           VSGPNA  IQ A  RTN T SDPIAA+F S+FM D P T AP L   +       L ++   
Subjt:  MAASCKIPLISMAILEAVRLIEALNPN-----------VSGPNAAAIQAAVWRTNCTASDPIAAVFRSVFMTDTPFTAAPELNTTL-------LMSLTFA

Query:  RSGGPTTAAH-------------SASAAESDRERSPGNAGRRRDVGFLA
        +   P   A+                  ES  ER+PGNA  R D  F A
Subjt:  RSGGPTTAAH-------------SASAAESDRERSPGNAGRRRDVGFLA

XP_022135557.1 dirigent protein 22-like [Momordica charantia]4.6e-1745.81Show/hide
Query:  MAASCKIPLISMAILEAVRLIEALNPN-----------VSGPNAAAIQAAVWRTNCTASDPIAAVFRSVFMTDTPFTAAPELNTT---------------
        MA S K  LIS+AIL A   IEALNPN           VSGPNA A+Q A  RTN T SDPIAA+F SVFM D P TA PELN+T               
Subjt:  MAASCKIPLISMAILEAVRLIEALNPN-----------VSGPNAAAIQAAVWRTNCTASDPIAAVFRSVFMTDTPFTAAPELNTT---------------

Query:  ----LLMSLTFARSGGPTTAAHSASAAE----SDRERSP---GNAGRRRDVGFLAGLTRTFSFREMDAT-GKNVTLIYE
            LLM+LTFA +GG    +  +        S+    P   G    R   G+   L RTFSFREMDA  G NVTLI++
Subjt:  ----LLMSLTFARSGGPTTAAHSASAAE----SDRERSP---GNAGRRRDVGFLAGLTRTFSFREMDAT-GKNVTLIYE

XP_031742018.1 dirigent protein 22-like [Cucumis sativus]2.3e-1343.58Show/hide
Query:  MAASCKIPLISMAILEAVRLIEALNPN-----------VSGPNAAAIQAAVWRTNCTASDPIAAVFRSVFMTDTPFTAAPELNTT---------------
        MA S KI +ISMAIL AV   EAL+PN           VSGPN  AIQ A  +TN   +DPIAA+F SVFM D P T  PELN+T               
Subjt:  MAASCKIPLISMAILEAVRLIEALNPN-----------VSGPNAAAIQAAVWRTNCTASDPIAAVFRSVFMTDTPFTAAPELNTT---------------

Query:  ----LLMSLTFARSGGPTTAAHSASAAESD-----RERS-PGNAGRRRDV-GFLAGLTRTFSFREMDAT-GKNVTLIYE
            LLM+LTF  +GG    +  +    +      RE    G  G  R V G+   L RTFSFR MDA  G NVTLI++
Subjt:  ----LLMSLTFARSGGPTTAAHSASAAESD-----RERS-PGNAGRRRDV-GFLAGLTRTFSFREMDAT-GKNVTLIYE

TrEMBL top hitse value%identityAlignment
A0A0A0LPF3 Dirigent protein1.1e-1343.58Show/hide
Query:  MAASCKIPLISMAILEAVRLIEALNPN-----------VSGPNAAAIQAAVWRTNCTASDPIAAVFRSVFMTDTPFTAAPELNTT---------------
        MA S KI +ISMAIL AV   EAL+PN           VSGPN  AIQ A  +TN   +DPIAA+F SVFM D P T  PELN+T               
Subjt:  MAASCKIPLISMAILEAVRLIEALNPN-----------VSGPNAAAIQAAVWRTNCTASDPIAAVFRSVFMTDTPFTAAPELNTT---------------

Query:  ----LLMSLTFARSGGPTTAAHSASAAESD-----RERS-PGNAGRRRDV-GFLAGLTRTFSFREMDAT-GKNVTLIYE
            LLM+LTF  +GG    +  +    +      RE    G  G  R V G+   L RTFSFR MDA  G NVTLI++
Subjt:  ----LLMSLTFARSGGPTTAAHSASAAESD-----RERS-PGNAGRRRDV-GFLAGLTRTFSFREMDAT-GKNVTLIYE

A0A5D3BJ74 Dirigent protein4.6e-1544.69Show/hide
Query:  MAASCKIPLISMAILEAVRLIEALNPN-----------VSGPNAAAIQAAVWRTNCTASDPIAAVFRSVFMTDTPFTAAPELNTT---------------
        MA S KI +ISMAIL AVR IEAL+PN           VSGPN  AIQ A  +TN T +DPIAA+F SVFM D P T  PELN+T               
Subjt:  MAASCKIPLISMAILEAVRLIEALNPN-----------VSGPNAAAIQAAVWRTNCTASDPIAAVFRSVFMTDTPFTAAPELNTT---------------

Query:  ----LLMSLTFARSGGPTTAAHSASAAESD-----RERS-PGNAGRRRDV-GFLAGLTRTFSFREMDAT-GKNVTLIYE
            LLM+LTF   GG    +  +    +      RE    G  G  R V G+   L RT+SFR MDA  G NVTLI++
Subjt:  ----LLMSLTFARSGGPTTAAHSASAAESD-----RERS-PGNAGRRRDV-GFLAGLTRTFSFREMDAT-GKNVTLIYE

A0A6J1AHG7 Dirigent protein2.8e-0435Show/hide
Query:  VSGPNAAAIQAAVWRTNCTASDPIAAVFRSVFMTDTPFTAAPELNTT-------------------LLMSLTFARSGGP----TTAAHSASAAESDRERS
        V GP   A++ A  R+N T  DPIAA F S+FM D P T  P +N+T                   LLM+LT+A + GP    T +    +   ++    
Subjt:  VSGPNAAAIQAAVWRTNCTASDPIAAVFRSVFMTDTPFTAAPELNTT-------------------LLMSLTFARSGGP----TTAAHSASAAESDRERS

Query:  P--GNAGR-RRDVGFLAGLTRTFSFREMDAT-GKNVTLIY
        P  G  G+ R   G+   L R++S +EMDA  G NVTL++
Subjt:  P--GNAGR-RRDVGFLAGLTRTFSFREMDAT-GKNVTLIY

A0A6J1C315 Dirigent protein2.2e-1745.81Show/hide
Query:  MAASCKIPLISMAILEAVRLIEALNPN-----------VSGPNAAAIQAAVWRTNCTASDPIAAVFRSVFMTDTPFTAAPELNTT---------------
        MA S K  LIS+AIL A   IEALNPN           VSGPNA A+Q A  RTN T SDPIAA+F SVFM D P TA PELN+T               
Subjt:  MAASCKIPLISMAILEAVRLIEALNPN-----------VSGPNAAAIQAAVWRTNCTASDPIAAVFRSVFMTDTPFTAAPELNTT---------------

Query:  ----LLMSLTFARSGGPTTAAHSASAAE----SDRERSP---GNAGRRRDVGFLAGLTRTFSFREMDAT-GKNVTLIYE
            LLM+LTFA +GG    +  +        S+    P   G    R   G+   L RTFSFREMDA  G NVTLI++
Subjt:  ----LLMSLTFARSGGPTTAAHSASAAE----SDRERSP---GNAGRRRDVGFLAGLTRTFSFREMDAT-GKNVTLIYE

A0A7J0H1V1 Dirigent protein3.7e-0434.53Show/hide
Query:  VSGPNAAAIQAAVWRTNCTASDPIAAVFRSVFMTDTPFTAAPELNTT-------------------LLMSLTFARSGGPTTAAHSASAAESDRERSP---
        V GPN  A++ A  R+N ++ DPIAA+F S+F+ D P TA+P+LN+T                   LLM+LT+    GP   +  +   ++   R     
Subjt:  VSGPNAAAIQAAVWRTNCTASDPIAAVFRSVFMTDTPFTAAPELNTT-------------------LLMSLTFARSGGPTTAAHSASAAESDRERSP---

Query:  ---GNAGRRRDVGFLAGLTRTFSFREMDAT-GKNVTLIY
           G  G  R     A L +T+S  +MDA  G NVTLI+
Subjt:  ---GNAGRRRDVGFLAGLTRTFSFREMDAT-GKNVTLIY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGCTTCCTGCAAGATACCGCTGATTTCCATGGCGATTCTCGAAGCTGTTCGTTTGATCGAGGCGTTAAACCCTAATGTGAGTGGTCCGAACGCCGCTGCGATTCA
AGCCGCCGTCTGGCGGACGAACTGCACGGCTTCGGATCCAATCGCCGCCGTGTTTCGGTCCGTTTTCATGACGGATACGCCGTTCACGGCCGCGCCGGAGTTGAACACGA
CTCTTTTGATGTCGCTAACCTTCGCGAGGTCTGGCGGACCGACAACGGCAGCTCATTCAGCGTCGGCGGCGGAATCCGATCGTGAACGAAGTCCGGGAAATGCAGGTCGT
CGGAGAGACGTGGGTTTTCTGGCTGGCCTTACAAGAACATTTTCGTTCCGAGAAATGGATGCAACTGGTAAGAACGTTACTTTGATTTATGAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCGCTTCCTGCAAGATACCGCTGATTTCCATGGCGATTCTCGAAGCTGTTCGTTTGATCGAGGCGTTAAACCCTAATGTGAGTGGTCCGAACGCCGCTGCGATTCA
AGCCGCCGTCTGGCGGACGAACTGCACGGCTTCGGATCCAATCGCCGCCGTGTTTCGGTCCGTTTTCATGACGGATACGCCGTTCACGGCCGCGCCGGAGTTGAACACGA
CTCTTTTGATGTCGCTAACCTTCGCGAGGTCTGGCGGACCGACAACGGCAGCTCATTCAGCGTCGGCGGCGGAATCCGATCGTGAACGAAGTCCGGGAAATGCAGGTCGT
CGGAGAGACGTGGGTTTTCTGGCTGGCCTTACAAGAACATTTTCGTTCCGAGAAATGGATGCAACTGGTAAGAACGTTACTTTGATTTATGAGTGA
Protein sequenceShow/hide protein sequence
MAASCKIPLISMAILEAVRLIEALNPNVSGPNAAAIQAAVWRTNCTASDPIAAVFRSVFMTDTPFTAAPELNTTLLMSLTFARSGGPTTAAHSASAAESDRERSPGNAGR
RRDVGFLAGLTRTFSFREMDATGKNVTLIYE