; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0007690 (gene) of Chayote v1 genome

Gene IDSed0007690
OrganismSechium edule (Chayote v1)
DescriptionLEA_2 domain-containing protein
Genome locationLG04:1836417..1837496
RNA-Seq ExpressionSed0007690
SyntenySed0007690
Gene Ontology termsNA
InterPro domainsIPR004864 - Late embryogenesis abundant protein, LEA_2 subgroup


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607382.1 hypothetical protein SDJN03_00724, partial [Cucurbita argyrosperma subsp. sororia]9.7e-4949.58Show/hide
Query:  NHDLTPQPNPLSDQPKSSRRVVFSDSLPKH-----RRRRFKFCRRFLACCGWICIAVLGIALTALILVAILTSVLESGLPEIRVRILDLSEFAIQNSTDP
        N+ +  Q + +    K +RRV FSDSLPKH     R  +F F R F A C WIC+AV GIA+T LIL  I  S L+SGLPEI V++LDLS+  IQNST+ 
Subjt:  NHDLTPQPNPLSDQPKSSRRVVFSDSLPKH-----RRRRFKFCRRFLACCGWICIAVLGIALTALILVAILTSVLESGLPEIRVRILDLSEFAIQNSTDP

Query:  NTGLLDARVLMSIQIWNKNEKMELSYSDMEVNFASEGVELGQNMVSGFAQVPGNTTLLKVTMHVEGDS----KALGLEDDRRKMEMNVQVTIKARIDFDL
        N  +L+ +V M+I I NKNEK+ELSYSD+ +   SE +ELG+N++  F+Q PGNTT L VT++V+ DS        LEDDR+K ++ V++T+   + F L
Subjt:  NTGLLDARVLMSIQIWNKNEKMELSYSDMEVNFASEGVELGQNMVSGFAQVPGNTTLLKVTMHVEGDS----KALGLEDDRRKMEMNVQVTIKARIDFDL

Query:  GVFELNQVLIYVDCEFLQSLRVYSVKDPSSCKIRMFLT
        G+F+LN+V I+V C F Q L +Y VK+P  C I MF T
Subjt:  GVFELNQVLIYVDCEFLQSLRVYSVKDPSSCKIRMFLT

XP_008457557.1 PREDICTED: uncharacterized protein LOC103497223 [Cucumis melo]5.7e-4950.65Show/hide
Query:  LSDQPKSSRRVVFSDSLPKHR--------RRRFKFCRRFLACCGWICIAVLGIALTALILVAILTSVLESGLPEIRVRILDLSEFAIQNST--DPNTGLL
        L  Q K SRRV FSDSLPKHR         R  K C R  ACC WIC+ + GI +  LIL  I  S L+SGLPEI VR+L+LS F I+NST  + N  LL
Subjt:  LSDQPKSSRRVVFSDSLPKHR--------RRRFKFCRRFLACCGWICIAVLGIALTALILVAILTSVLESGLPEIRVRILDLSEFAIQNST--DPNTGLL

Query:  DARVLMSIQIWNKNEKMELSYSDMEVNFASEGVELGQNMVSGFAQVPGNTTLLKVTMHVEGDS----KALGLEDDRRKMEMNVQVTIKARIDFDLGVFEL
        +A++ MSI++ NKNEK+ELSYS + VN  SE V+LG++++  F+  PGNTT L VTM+VE  S        LEDDR+K++M+VQV ++A++ F +G+F L
Subjt:  DARVLMSIQIWNKNEKMELSYSDMEVNFASEGVELGQNMVSGFAQVPGNTTLLKVTMHVEGDS----KALGLEDDRRKMEMNVQVTIKARIDFDLGVFEL

Query:  NQVLIYVDCEFLQSLRVYSVKDPSSCKIRMF
          V I+V C+F Q+L VY + +P  C IRMF
Subjt:  NQVLIYVDCEFLQSLRVYSVKDPSSCKIRMF

XP_022949169.1 uncharacterized protein LOC111452600 [Cucurbita moschata]1.7e-4849.79Show/hide
Query:  NHDLTPQPNPLSDQPKSSRRVVFSDSLPKHRR---RRFKFC-RRFLACCGWICIAVLGIALTALILVAILTSVLESGLPEIRVRILDLSEFAIQNSTDPN
        N+ +  Q + +    K +RRV FSDSLPKHR    R  KF     LA C WIC+AV GIA+T LIL  I  S L+SGLPEI V++LDLS+  IQNST+ N
Subjt:  NHDLTPQPNPLSDQPKSSRRVVFSDSLPKHRR---RRFKFC-RRFLACCGWICIAVLGIALTALILVAILTSVLESGLPEIRVRILDLSEFAIQNSTDPN

Query:  TGLLDARVLMSIQIWNKNEKMELSYSDMEVNFASEGVELGQNMVSGFAQVPGNTTLLKVTMHVEGDS----KALGLEDDRRKMEMNVQVTIKARIDFDLG
          +L+ +V M+I I NKNEK+ELSYSD+ +   SE +ELG+N++  F+Q PGNTT L VT++V+ DS        LEDDR+K ++ V++T+   + F LG
Subjt:  TGLLDARVLMSIQIWNKNEKMELSYSDMEVNFASEGVELGQNMVSGFAQVPGNTTLLKVTMHVEGDS----KALGLEDDRRKMEMNVQVTIKARIDFDLG

Query:  VFELNQVLIYVDCEFLQSLRVYSVKDPSSCKIRMFLT
        +F+LN+V I+V C F Q L +Y VK+P  C I MF T
Subjt:  VFELNQVLIYVDCEFLQSLRVYSVKDPSSCKIRMFLT

XP_022998792.1 uncharacterized protein LOC111493353 [Cucurbita maxima]3.1e-4748.74Show/hide
Query:  NHDLTPQPNPLSDQPKSSRRVVFSDSLPKH-----RRRRFKFCRRFLACCGWICIAVLGIALTALILVAILTSVLESGLPEIRVRILDLSEFAIQNSTDP
        N+ +  Q + +    K +RRV FSDSLPKH     R  +F F   F A C WIC+AV GIA+T LIL  I  S L+S LPEI V++LDLS+  IQNST+ 
Subjt:  NHDLTPQPNPLSDQPKSSRRVVFSDSLPKH-----RRRRFKFCRRFLACCGWICIAVLGIALTALILVAILTSVLESGLPEIRVRILDLSEFAIQNSTDP

Query:  NTGLLDARVLMSIQIWNKNEKMELSYSDMEVNFASEGVELGQNMVSGFAQVPGNTTLLKVTMHVEGDS----KALGLEDDRRKMEMNVQVTIKARIDFDL
        N  +L+ +V M+I I NKNEK+ELSYSD+ +   SE +ELG+N++  F+Q PGNTT L VT+ V+ DS        LEDDR+K ++ V++T+   + F L
Subjt:  NTGLLDARVLMSIQIWNKNEKMELSYSDMEVNFASEGVELGQNMVSGFAQVPGNTTLLKVTMHVEGDS----KALGLEDDRRKMEMNVQVTIKARIDFDL

Query:  GVFELNQVLIYVDCEFLQSLRVYSVKDPSSCKIRMFLT
        G+F+LN+V I+V C F Q L +Y VK+P  C I MF T
Subjt:  GVFELNQVLIYVDCEFLQSLRVYSVKDPSSCKIRMFLT

XP_038895624.1 uncharacterized protein LOC120083816 [Benincasa hispida]1.4e-5048.56Show/hide
Query:  MNHDLTPQPNPLSDQPKSSRRVVFSDSLPKHR--------RRRFKFCRRFLACCGWICIAVLGIALTALILVAILTSVLESGLPEIRVRILDLSEFAIQN
        MN+  + Q + L  Q + SRRV FS+SLP+HR        R R K C R  ACC WIC+ V GI L  LIL  I  S L+SGLP+I V++L+LS+F   N
Subjt:  MNHDLTPQPNPLSDQPKSSRRVVFSDSLPKHR--------RRRFKFCRRFLACCGWICIAVLGIALTALILVAILTSVLESGLPEIRVRILDLSEFAIQN

Query:  STDPNTGLLDARVLMSIQIWNKNEKMELSYSDMEVNFASEGVELGQNMVSGFAQVPGNTTLLKVTMHVEGDS----KALGLEDDRRKMEMNVQVTIKARI
        ST+ N  LL+A+V +SI++ NKN+K+ELSYS++ VN AS+ V+LG++++ GF   PGNTT   VTM+V G S        LEDDR++++MNVQVT+++ +
Subjt:  STDPNTGLLDARVLMSIQIWNKNEKMELSYSDMEVNFASEGVELGQNMVSGFAQVPGNTTLLKVTMHVEGDS----KALGLEDDRRKMEMNVQVTIKARI

Query:  DFDLGVFELNQVLIYVDCEFLQSLRVYSVKDPSSCKIRMFLTL
         F +G+F LN V I+V C+F Q L +Y + +P  C IRMF TL
Subjt:  DFDLGVFELNQVLIYVDCEFLQSLRVYSVKDPSSCKIRMFLTL

TrEMBL top hitse value%identityAlignment
A0A1S3C5S1 uncharacterized protein LOC1034972232.8e-4950.65Show/hide
Query:  LSDQPKSSRRVVFSDSLPKHR--------RRRFKFCRRFLACCGWICIAVLGIALTALILVAILTSVLESGLPEIRVRILDLSEFAIQNST--DPNTGLL
        L  Q K SRRV FSDSLPKHR         R  K C R  ACC WIC+ + GI +  LIL  I  S L+SGLPEI VR+L+LS F I+NST  + N  LL
Subjt:  LSDQPKSSRRVVFSDSLPKHR--------RRRFKFCRRFLACCGWICIAVLGIALTALILVAILTSVLESGLPEIRVRILDLSEFAIQNST--DPNTGLL

Query:  DARVLMSIQIWNKNEKMELSYSDMEVNFASEGVELGQNMVSGFAQVPGNTTLLKVTMHVEGDS----KALGLEDDRRKMEMNVQVTIKARIDFDLGVFEL
        +A++ MSI++ NKNEK+ELSYS + VN  SE V+LG++++  F+  PGNTT L VTM+VE  S        LEDDR+K++M+VQV ++A++ F +G+F L
Subjt:  DARVLMSIQIWNKNEKMELSYSDMEVNFASEGVELGQNMVSGFAQVPGNTTLLKVTMHVEGDS----KALGLEDDRRKMEMNVQVTIKARIDFDLGVFEL

Query:  NQVLIYVDCEFLQSLRVYSVKDPSSCKIRMF
          V I+V C+F Q+L VY + +P  C IRMF
Subjt:  NQVLIYVDCEFLQSLRVYSVKDPSSCKIRMF

A0A5A7V2C7 Putative transmembrane protein2.8e-4950.65Show/hide
Query:  LSDQPKSSRRVVFSDSLPKHR--------RRRFKFCRRFLACCGWICIAVLGIALTALILVAILTSVLESGLPEIRVRILDLSEFAIQNST--DPNTGLL
        L  Q K SRRV FSDSLPKHR         R  K C R  ACC WIC+ + GI +  LIL  I  S L+SGLPEI VR+L+LS F I+NST  + N  LL
Subjt:  LSDQPKSSRRVVFSDSLPKHR--------RRRFKFCRRFLACCGWICIAVLGIALTALILVAILTSVLESGLPEIRVRILDLSEFAIQNST--DPNTGLL

Query:  DARVLMSIQIWNKNEKMELSYSDMEVNFASEGVELGQNMVSGFAQVPGNTTLLKVTMHVEGDS----KALGLEDDRRKMEMNVQVTIKARIDFDLGVFEL
        +A++ MSI++ NKNEK+ELSYS + VN  SE V+LG++++  F+  PGNTT L VTM+VE  S        LEDDR+K++M+VQV ++A++ F +G+F L
Subjt:  DARVLMSIQIWNKNEKMELSYSDMEVNFASEGVELGQNMVSGFAQVPGNTTLLKVTMHVEGDS----KALGLEDDRRKMEMNVQVTIKARIDFDLGVFEL

Query:  NQVLIYVDCEFLQSLRVYSVKDPSSCKIRMF
          V I+V C+F Q+L VY + +P  C IRMF
Subjt:  NQVLIYVDCEFLQSLRVYSVKDPSSCKIRMF

A0A6J1E0W1 uncharacterized protein LOC1110249232.2e-3844.2Show/hide
Query:  DQPKSSRRVVFSDSLPKHRRRR---FKFCRRFLACCGWICIAVLGIALTALILVAILTSVLESGLPEIRVRILDLSEFAIQNSTDP--NTGLLDARVLMS
        ++ K  RRV FS+SLP HR       K  RR  A CG ICI   GI L  LI+  I  S L+SGLPEI ++ L LS+F I +ST+   N  +LDARV +S
Subjt:  DQPKSSRRVVFSDSLPKHRRRR---FKFCRRFLACCGWICIAVLGIALTALILVAILTSVLESGLPEIRVRILDLSEFAIQNSTDP--NTGLLDARVLMS

Query:  IQIWNKNEKMELSYSDMEVNFASEGVELGQNMVSGFAQVPGNTTLLKVTMHVEGD----SKALGLEDDRRKMEMNVQVTIKARIDFDLGVFELNQVLIYV
        + + NKN+K+ELSY D+ VN AS+ V+LG++++ GF+  PGNTT L VT +V GD      AL ++++++++EM  QV ++A I F  G+F + +V I+V
Subjt:  IQIWNKNEKMELSYSDMEVNFASEGVELGQNMVSGFAQVPGNTTLLKVTMHVEGD----SKALGLEDDRRKMEMNVQVTIKARIDFDLGVFELNQVLIYV

Query:  DCEFLQSLRVYSVKDPSSCKIRMF
         C+ +Q   + +    +SC IRMF
Subjt:  DCEFLQSLRVYSVKDPSSCKIRMF

A0A6J1GC15 uncharacterized protein LOC1114526008.0e-4949.79Show/hide
Query:  NHDLTPQPNPLSDQPKSSRRVVFSDSLPKHRR---RRFKFC-RRFLACCGWICIAVLGIALTALILVAILTSVLESGLPEIRVRILDLSEFAIQNSTDPN
        N+ +  Q + +    K +RRV FSDSLPKHR    R  KF     LA C WIC+AV GIA+T LIL  I  S L+SGLPEI V++LDLS+  IQNST+ N
Subjt:  NHDLTPQPNPLSDQPKSSRRVVFSDSLPKHRR---RRFKFC-RRFLACCGWICIAVLGIALTALILVAILTSVLESGLPEIRVRILDLSEFAIQNSTDPN

Query:  TGLLDARVLMSIQIWNKNEKMELSYSDMEVNFASEGVELGQNMVSGFAQVPGNTTLLKVTMHVEGDS----KALGLEDDRRKMEMNVQVTIKARIDFDLG
          +L+ +V M+I I NKNEK+ELSYSD+ +   SE +ELG+N++  F+Q PGNTT L VT++V+ DS        LEDDR+K ++ V++T+   + F LG
Subjt:  TGLLDARVLMSIQIWNKNEKMELSYSDMEVNFASEGVELGQNMVSGFAQVPGNTTLLKVTMHVEGDS----KALGLEDDRRKMEMNVQVTIKARIDFDLG

Query:  VFELNQVLIYVDCEFLQSLRVYSVKDPSSCKIRMFLT
        +F+LN+V I+V C F Q L +Y VK+P  C I MF T
Subjt:  VFELNQVLIYVDCEFLQSLRVYSVKDPSSCKIRMFLT

A0A6J1K8Y2 uncharacterized protein LOC1114933531.5e-4748.74Show/hide
Query:  NHDLTPQPNPLSDQPKSSRRVVFSDSLPKH-----RRRRFKFCRRFLACCGWICIAVLGIALTALILVAILTSVLESGLPEIRVRILDLSEFAIQNSTDP
        N+ +  Q + +    K +RRV FSDSLPKH     R  +F F   F A C WIC+AV GIA+T LIL  I  S L+S LPEI V++LDLS+  IQNST+ 
Subjt:  NHDLTPQPNPLSDQPKSSRRVVFSDSLPKH-----RRRRFKFCRRFLACCGWICIAVLGIALTALILVAILTSVLESGLPEIRVRILDLSEFAIQNSTDP

Query:  NTGLLDARVLMSIQIWNKNEKMELSYSDMEVNFASEGVELGQNMVSGFAQVPGNTTLLKVTMHVEGDS----KALGLEDDRRKMEMNVQVTIKARIDFDL
        N  +L+ +V M+I I NKNEK+ELSYSD+ +   SE +ELG+N++  F+Q PGNTT L VT+ V+ DS        LEDDR+K ++ V++T+   + F L
Subjt:  NTGLLDARVLMSIQIWNKNEKMELSYSDMEVNFASEGVELGQNMVSGFAQVPGNTTLLKVTMHVEGDS----KALGLEDDRRKMEMNVQVTIKARIDFDL

Query:  GVFELNQVLIYVDCEFLQSLRVYSVKDPSSCKIRMFLT
        G+F+LN+V I+V C F Q L +Y VK+P  C I MF T
Subjt:  GVFELNQVLIYVDCEFLQSLRVYSVKDPSSCKIRMFLT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G30505.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family7.0e-1329.69Show/hide
Query:  FLACCGWICIAVLGIALTALILVAILTSVLESGLPEIRVRILDLSEFAI-QNSTDPNTGLLDARVLMSIQIWNKNEKMELSYSDMEVNFASEGVELGQNM
        F  CC   C+ V  + +  L++     S ++S LP++ V  L  S   I ++STD    L++A +   +Q+ N N+K  L YS M+ + +SE + LG+  
Subjt:  FLACCGWICIAVLGIALTALILVAILTSVLESGLPEIRVRILDLSEFAI-QNSTDPNTGLLDARVLMSIQIWNKNEKMELSYSDMEVNFASEGVELGQNM

Query:  VSGFAQVPGNTTLLKVTMHVEG----DSKALGLEDDRRKMEMNVQVTIKARIDFDLGVFELNQVLIYVDCEFLQSLRVYSVKDPSSCKIRMF
        +SGF Q PGN T LK+   +      D  A  L +  + +E  V V ++ ++  D   F+++ + I + CE ++   V +   P +C +R+F
Subjt:  VSGFAQVPGNTTLLKVTMHVEG----DSKALGLEDDRRKMEMNVQVTIKARIDFDLGVFELNQVLIYVDCEFLQSLRVYSVKDPSSCKIRMF

AT4G01110.1 unknown protein1.4e-0523.9Show/hide
Query:  RRRRFKFCRRFLACCGWICIAVLGIALTALILVAILTSVLESGLPEIRVRILDLSEFAIQ-NSTDPNTGLLDARVLMSIQIWNKNEKMELSYS--DMEVN
        ++R++  CR F  C   +CI V  + L  ++ V++        LP +R+    +S F             L A     +   N N K+   Y   D+ V+
Subjt:  RRRRFKFCRRFLACCGWICIAVLGIALTALILVAILTSVLESGLPEIRVRILDLSEFAIQ-NSTDPNTGLLDARVLMSIQIWNKNEKMELSYS--DMEVN

Query:  FASEGVE--LGQNMVSGFAQVPGNTTLLKVTMHVE----GDSKALGLEDDRRKMEMNVQVTIKARIDFDLGVFELNQVLIYVDCEFLQSLRVYSVKDPSS
           +  E  LG   V GF + PGN T++ V + V+     D     L  D +  ++ V+V  K ++   +G  ++  V + + C  ++   + S    S 
Subjt:  FASEGVE--LGQNMVSGFAQVPGNTTLLKVTMHVE----GDSKALGLEDDRRKMEMNVQVTIKARIDFDLGVFELNQVLIYVDCEFLQSLRVYSVKDPSS

Query:  CKIRM
        C I+M
Subjt:  CKIRM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATCACGATCTCACTCCTCAACCGAATCCCCTTTCAGACCAACCTAAATCCTCTCGTCGCGTCGTCTTCTCCGATTCCCTTCCCAAACACCGCCGCCGCAGATTCAA
ATTCTGCCGCCGATTCCTAGCCTGTTGCGGTTGGATCTGCATCGCCGTGCTCGGAATCGCTCTAACCGCTCTCATCCTCGTCGCGATTCTAACCTCCGTCCTCGAATCAG
GATTGCCAGAAATCAGAGTAAGAATTCTGGATCTGTCCGAATTCGCGATCCAAAACTCCACGGATCCGAATACTGGACTCCTAGATGCACGAGTTTTGATGTCGATCCAG
ATCTGGAACAAGAATGAGAAAATGGAGCTGAGTTACAGCGATATGGAGGTGAATTTCGCGTCGGAGGGAGTGGAATTAGGGCAGAATATGGTCTCTGGATTCGCACAAGT
GCCTGGAAACACAACGCTTCTGAAAGTAACCATGCATGTGGAGGGAGATTCGAAGGCGTTGGGATTAGAAGATGACCGGAGAAAGATGGAGATGAATGTGCAGGTTACGA
TCAAAGCTAGGATTGATTTTGATCTTGGAGTCTTCGAACTGAACCAGGTACTGATTTATGTAGACTGTGAATTTCTTCAATCGCTTCGTGTTTATAGCGTTAAGGATCCT
TCGTCATGTAAAATTAGAATGTTCCTCACATTGTAA
mRNA sequenceShow/hide mRNA sequence
CTTCAATCTGCCAATTTCTTAATTTTAGCACACTCCCCTTTTCCCGATGGAGATCATTGCCGGAGCAAAATCCCAATCGCTTTTTGAATCCGCAACCACCGGACCGCCGC
CGTCGCCGGCCGGGCACAAGAGACCGATCTCTTGTTCCAATTTCAACGATGAATCACGATCTCACTCCTCAACCGAATCCCCTTTCAGACCAACCTAAATCCTCTCGTCG
CGTCGTCTTCTCCGATTCCCTTCCCAAACACCGCCGCCGCAGATTCAAATTCTGCCGCCGATTCCTAGCCTGTTGCGGTTGGATCTGCATCGCCGTGCTCGGAATCGCTC
TAACCGCTCTCATCCTCGTCGCGATTCTAACCTCCGTCCTCGAATCAGGATTGCCAGAAATCAGAGTAAGAATTCTGGATCTGTCCGAATTCGCGATCCAAAACTCCACG
GATCCGAATACTGGACTCCTAGATGCACGAGTTTTGATGTCGATCCAGATCTGGAACAAGAATGAGAAAATGGAGCTGAGTTACAGCGATATGGAGGTGAATTTCGCGTC
GGAGGGAGTGGAATTAGGGCAGAATATGGTCTCTGGATTCGCACAAGTGCCTGGAAACACAACGCTTCTGAAAGTAACCATGCATGTGGAGGGAGATTCGAAGGCGTTGG
GATTAGAAGATGACCGGAGAAAGATGGAGATGAATGTGCAGGTTACGATCAAAGCTAGGATTGATTTTGATCTTGGAGTCTTCGAACTGAACCAGGTACTGATTTATGTA
GACTGTGAATTTCTTCAATCGCTTCGTGTTTATAGCGTTAAGGATCCTTCGTCATGTAAAATTAGAATGTTCCTCACATTGTAAATTAGAGAATTTAAAACCAAACCTAA
GTGTATGAATTTATCTCAGCTTAGACCATTTCTCAAGTTCATCATCGATCAATACGTGACATGATGGATCGCCAAGATTATAGGTTCCATTCATGAATTGAGTATTTTTG
TTTGTTTGTTTGTTTTTGTTGATGAAACACTCTCTTTACTACAGTTAATATACTGTTTTTCCCTTATTGTTATTTTTTATTAAAATTTCC
Protein sequenceShow/hide protein sequence
MNHDLTPQPNPLSDQPKSSRRVVFSDSLPKHRRRRFKFCRRFLACCGWICIAVLGIALTALILVAILTSVLESGLPEIRVRILDLSEFAIQNSTDPNTGLLDARVLMSIQ
IWNKNEKMELSYSDMEVNFASEGVELGQNMVSGFAQVPGNTTLLKVTMHVEGDSKALGLEDDRRKMEMNVQVTIKARIDFDLGVFELNQVLIYVDCEFLQSLRVYSVKDP
SSCKIRMFLTL