; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0007748 (gene) of Chayote v1 genome

Gene IDSed0007748
OrganismSechium edule (Chayote v1)
DescriptionAminoacyl-tRNA hydrolase
Genome locationLG03:9745119..9746785
RNA-Seq ExpressionSed0007748
SyntenySed0007748
Gene Ontology termsGO:0004045 - aminoacyl-tRNA hydrolase activity (molecular function)
InterPro domainsIPR002833 - Peptidyl-tRNA hydrolase, PTH2
IPR023476 - Peptidyl-tRNA hydrolase II domain superfamily
IPR042237 - Putative peptidyl-tRNA hydrolase PTRHD1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7020347.1 putative peptidyl-tRNA hydrolase PTRHD1, partial [Cucurbita argyrosperma subsp. argyrosperma]7.1e-8284.66Show/hide
Query:  MTFVISASRFTFSISNSTKLCSTARVWPSSSLGFHNLSWNSSQFSSASMTESPESNSVLPPDDGGAKAEETADVLVQYVVLRRDLIDSWALGSVVTQGCH
        M  VISASRFTFSISNS++LC  ARVW  SS+   + +WNS  FSSASM+ES ES+SVLP DDGGAKAEE ADVLVQYVVLRRDLIDSW LGSVVTQGCH
Subjt:  MTFVISASRFTFSISNSTKLCSTARVWPSSSLGFHNLSWNSSQFSSASMTESPESNSVLPPDDGGAKAEETADVLVQYVVLRRDLIDSWALGSVVTQGCH

Query:  ASVSAIWLNKDDSHTLEYCSPGHIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSPFFKKLKLCK
        ASVSAIWLNKDD HT EYCSP +IDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLW+EQPENIPTCLA+KPYPKSVVSPFFKKLKLCK
Subjt:  ASVSAIWLNKDDSHTLEYCSPGHIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSPFFKKLKLCK

XP_022951520.1 putative peptidyl-tRNA hydrolase PTRHD1 isoform X1 [Cucurbita moschata]3.2e-8285.19Show/hide
Query:  MTFVISASRFTFSISNSTKLCSTARVWPSSSLGFHNLSWNSSQFSSASMTESPESNSVLPPDDGGAKAEETADVLVQYVVLRRDLIDSWALGSVVTQGCH
        M  VISASRFTFSISNS +LC  ARVW  SS+   + +WNS  FSSASM+ES ESNSVLP DDGGAKAEE ADVLVQYVVLRRDLIDSW LGSVVTQGCH
Subjt:  MTFVISASRFTFSISNSTKLCSTARVWPSSSLGFHNLSWNSSQFSSASMTESPESNSVLPPDDGGAKAEETADVLVQYVVLRRDLIDSWALGSVVTQGCH

Query:  ASVSAIWLNKDDSHTLEYCSPGHIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSPFFKKLKLCK
        ASVSAIWLNKDD HT EYCSP +IDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLW+EQPENIPTCLA+KPYPKSVVSPFFKKLKLCK
Subjt:  ASVSAIWLNKDDSHTLEYCSPGHIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSPFFKKLKLCK

XP_022951521.1 putative peptidyl-tRNA hydrolase PTRHD1 isoform X2 [Cucurbita moschata]1.0e-8085.03Show/hide
Query:  MTFVISASRFTFSISNSTKLCSTARVWPSSSLGFHNLSWNSSQFSSASMTESPESNSVLPPDDGGAKAEETADVLVQYVVLRRDLIDSWALGSVVTQGCH
        M  VISASRFTFSISNS +LC  ARVW  SS+   + +WNS  FSSASM+ES ESNSVLP DDGGAKAEE ADVLVQYVVLRRDLIDSW LGSVVTQGCH
Subjt:  MTFVISASRFTFSISNSTKLCSTARVWPSSSLGFHNLSWNSSQFSSASMTESPESNSVLPPDDGGAKAEETADVLVQYVVLRRDLIDSWALGSVVTQGCH

Query:  ASVSAIWLNKDDSHTLEYCSPGHIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSPFFKKLKL
        ASVSAIWLNKDD HT EYCSP +IDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLW+EQPENIPTCLA+KPYPKSVVSPFFKKLKL
Subjt:  ASVSAIWLNKDDSHTLEYCSPGHIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSPFFKKLKL

XP_023002512.1 putative peptidyl-tRNA hydrolase PTRHD1 isoform X1 [Cucurbita maxima]6.4e-8385.71Show/hide
Query:  MTFVISASRFTFSISNSTKLCSTARVWPSSSLGFHNLSWNSSQFSSASMTESPESNSVLPPDDGGAKAEETADVLVQYVVLRRDLIDSWALGSVVTQGCH
        M  VISASRFTFSISNS +LCS ARVW  SS+   + +WNS  FSSASM+ES ESNSVLP DDGGAKAEE ADVLVQYVVLRRDLIDSW LGSVVTQGCH
Subjt:  MTFVISASRFTFSISNSTKLCSTARVWPSSSLGFHNLSWNSSQFSSASMTESPESNSVLPPDDGGAKAEETADVLVQYVVLRRDLIDSWALGSVVTQGCH

Query:  ASVSAIWLNKDDSHTLEYCSPGHIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSPFFKKLKLCK
        ASVSAIWLNKDD HT EYCSP +IDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLW+EQPENIPTCLA+KPYPKSVVSPFFKKLKLCK
Subjt:  ASVSAIWLNKDDSHTLEYCSPGHIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSPFFKKLKLCK

XP_023002513.1 putative peptidyl-tRNA hydrolase PTRHD1 isoform X2 [Cucurbita maxima]2.1e-8185.56Show/hide
Query:  MTFVISASRFTFSISNSTKLCSTARVWPSSSLGFHNLSWNSSQFSSASMTESPESNSVLPPDDGGAKAEETADVLVQYVVLRRDLIDSWALGSVVTQGCH
        M  VISASRFTFSISNS +LCS ARVW  SS+   + +WNS  FSSASM+ES ESNSVLP DDGGAKAEE ADVLVQYVVLRRDLIDSW LGSVVTQGCH
Subjt:  MTFVISASRFTFSISNSTKLCSTARVWPSSSLGFHNLSWNSSQFSSASMTESPESNSVLPPDDGGAKAEETADVLVQYVVLRRDLIDSWALGSVVTQGCH

Query:  ASVSAIWLNKDDSHTLEYCSPGHIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSPFFKKLKL
        ASVSAIWLNKDD HT EYCSP +IDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLW+EQPENIPTCLA+KPYPKSVVSPFFKKLKL
Subjt:  ASVSAIWLNKDDSHTLEYCSPGHIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSPFFKKLKL

TrEMBL top hitse value%identityAlignment
A0A6J1GHT5 Aminoacyl-tRNA hydrolase5.0e-8185.03Show/hide
Query:  MTFVISASRFTFSISNSTKLCSTARVWPSSSLGFHNLSWNSSQFSSASMTESPESNSVLPPDDGGAKAEETADVLVQYVVLRRDLIDSWALGSVVTQGCH
        M  VISASRFTFSISNS +LC  ARVW  SS+   + +WNS  FSSASM+ES ESNSVLP DDGGAKAEE ADVLVQYVVLRRDLIDSW LGSVVTQGCH
Subjt:  MTFVISASRFTFSISNSTKLCSTARVWPSSSLGFHNLSWNSSQFSSASMTESPESNSVLPPDDGGAKAEETADVLVQYVVLRRDLIDSWALGSVVTQGCH

Query:  ASVSAIWLNKDDSHTLEYCSPGHIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSPFFKKLKL
        ASVSAIWLNKDD HT EYCSP +IDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLW+EQPENIPTCLA+KPYPKSVVSPFFKKLKL
Subjt:  ASVSAIWLNKDDSHTLEYCSPGHIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSPFFKKLKL

A0A6J1GJ11 Aminoacyl-tRNA hydrolase1.5e-8285.19Show/hide
Query:  MTFVISASRFTFSISNSTKLCSTARVWPSSSLGFHNLSWNSSQFSSASMTESPESNSVLPPDDGGAKAEETADVLVQYVVLRRDLIDSWALGSVVTQGCH
        M  VISASRFTFSISNS +LC  ARVW  SS+   + +WNS  FSSASM+ES ESNSVLP DDGGAKAEE ADVLVQYVVLRRDLIDSW LGSVVTQGCH
Subjt:  MTFVISASRFTFSISNSTKLCSTARVWPSSSLGFHNLSWNSSQFSSASMTESPESNSVLPPDDGGAKAEETADVLVQYVVLRRDLIDSWALGSVVTQGCH

Query:  ASVSAIWLNKDDSHTLEYCSPGHIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSPFFKKLKLCK
        ASVSAIWLNKDD HT EYCSP +IDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLW+EQPENIPTCLA+KPYPKSVVSPFFKKLKLCK
Subjt:  ASVSAIWLNKDDSHTLEYCSPGHIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSPFFKKLKLCK

A0A6J1HBR1 Aminoacyl-tRNA hydrolase3.7e-7680.63Show/hide
Query:  MTFVISASRFTFSISNSTKL--CSTARVWPSSSLGFHNLSWNSSQFSSASMTESPESNSVLPPDDGGAKAEETADVLVQYVVLRRDLIDSWALGSVVTQG
        M  VISASRFTFSIS STKL  CS +RVWPSSSL   + + NS+ FSS SM+ES ESNS  PPDD     E+TADVL+QYVVLRRDLIDSW LGSVVTQG
Subjt:  MTFVISASRFTFSISNSTKL--CSTARVWPSSSLGFHNLSWNSSQFSSASMTESPESNSVLPPDDGGAKAEETADVLVQYVVLRRDLIDSWALGSVVTQG

Query:  CHASVSAIWLNKDDSHTLEYCSPGHIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSPFFKKLKLCK
        CHASVSA+WLNKDD HT EYCSP +IDSMHKVTLEVKGETQIVNLSEKL+ANSI HKLWIEQPENIPTCLATKPYPKSVVS FFKKLKLCK
Subjt:  CHASVSAIWLNKDDSHTLEYCSPGHIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSPFFKKLKLCK

A0A6J1KJQ6 Aminoacyl-tRNA hydrolase3.1e-8385.71Show/hide
Query:  MTFVISASRFTFSISNSTKLCSTARVWPSSSLGFHNLSWNSSQFSSASMTESPESNSVLPPDDGGAKAEETADVLVQYVVLRRDLIDSWALGSVVTQGCH
        M  VISASRFTFSISNS +LCS ARVW  SS+   + +WNS  FSSASM+ES ESNSVLP DDGGAKAEE ADVLVQYVVLRRDLIDSW LGSVVTQGCH
Subjt:  MTFVISASRFTFSISNSTKLCSTARVWPSSSLGFHNLSWNSSQFSSASMTESPESNSVLPPDDGGAKAEETADVLVQYVVLRRDLIDSWALGSVVTQGCH

Query:  ASVSAIWLNKDDSHTLEYCSPGHIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSPFFKKLKLCK
        ASVSAIWLNKDD HT EYCSP +IDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLW+EQPENIPTCLA+KPYPKSVVSPFFKKLKLCK
Subjt:  ASVSAIWLNKDDSHTLEYCSPGHIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSPFFKKLKLCK

A0A6J1KTS0 Aminoacyl-tRNA hydrolase1.0e-8185.56Show/hide
Query:  MTFVISASRFTFSISNSTKLCSTARVWPSSSLGFHNLSWNSSQFSSASMTESPESNSVLPPDDGGAKAEETADVLVQYVVLRRDLIDSWALGSVVTQGCH
        M  VISASRFTFSISNS +LCS ARVW  SS+   + +WNS  FSSASM+ES ESNSVLP DDGGAKAEE ADVLVQYVVLRRDLIDSW LGSVVTQGCH
Subjt:  MTFVISASRFTFSISNSTKLCSTARVWPSSSLGFHNLSWNSSQFSSASMTESPESNSVLPPDDGGAKAEETADVLVQYVVLRRDLIDSWALGSVVTQGCH

Query:  ASVSAIWLNKDDSHTLEYCSPGHIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSPFFKKLKL
        ASVSAIWLNKDD HT EYCSP +IDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLW+EQPENIPTCLA+KPYPKSVVSPFFKKLKL
Subjt:  ASVSAIWLNKDDSHTLEYCSPGHIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSPFFKKLKL

SwissProt top hitse value%identityAlignment
D3Z4S3 Putative peptidyl-tRNA hydrolase PTRHD19.2e-2447.06Show/hide
Query:  VLVQYVVLRRDLID---SWALGSVVTQGCHASVSAIWLNKDDSHTLEYCSPGHIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWIEQPENIPTCLAT
        +LVQY+VLR+DL     SW  G++V Q CHA+ +A+ L++D  HT  Y     +  M KV LE   ET +  L+E L+  +I H LW+EQPENI TC+A 
Subjt:  VLVQYVVLRRDLID---SWALGSVVTQGCHASVSAIWLNKDDSHTLEYCSPGHIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWIEQPENIPTCLAT

Query:  KPYPKSVVSPFFKKLKLCK
        +PYPK  VS + KK +L K
Subjt:  KPYPKSVVSPFFKKLKLCK

Q3SZ85 Putative peptidyl-tRNA hydrolase PTRHD19.8e-2649.58Show/hide
Query:  VLVQYVVLRRDLID---SWALGSVVTQGCHASVSAIWLNKDDSHTLEYCSPGHIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWIEQPENIPTCLAT
        +LVQY+VLR+DL     SW  G+VV Q CHA+ +A+ L++D  HT  Y     ++ M KV LE   ET +  L+E L+  +I HKLW+EQPENIPTC+A 
Subjt:  VLVQYVVLRRDLID---SWALGSVVTQGCHASVSAIWLNKDDSHTLEYCSPGHIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWIEQPENIPTCLAT

Query:  KPYPKSVVSPFFKKLKLCK
        +PYPK  VS + KK +L K
Subjt:  KPYPKSVVSPFFKKLKLCK

Q6GMV3 Putative peptidyl-tRNA hydrolase PTRHD15.9e-2346.22Show/hide
Query:  VLVQYVVLRRDLID---SWALGSVVTQGCHASVSAIWLNKDDSHTLEYCSPGHIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWIEQPENIPTCLAT
        VLVQY+VLR+DL     SW  G++V Q CHA+ +A+  ++D  HT  Y     +  M KV LE   ET +  L+E L+  +I H LW+EQPENI TC+A 
Subjt:  VLVQYVVLRRDLID---SWALGSVVTQGCHASVSAIWLNKDDSHTLEYCSPGHIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWIEQPENIPTCLAT

Query:  KPYPKSVVSPFFKKLKLCK
        +PYPK  V  + KK +L K
Subjt:  KPYPKSVVSPFFKKLKLCK

Arabidopsis top hitse value%identityAlignment
AT5G10700.1 Peptidyl-tRNA hydrolase II (PTH2) family protein1.1e-5370.75Show/hide
Query:  QFSSASMTESPESNSVLPPDDGGAKAEETADVLVQYVVLRRDLIDSWALGSVVTQGCHASVSAIWLNKDDSHTLEYCSPGHIDSMHKVTLEVKGETQIVN
        +F++AS + S ++  +    D  + AE+  DV+VQYVVLRRDLIDSW LGSVVTQGCHASV+AIW  KDD  TL+YC P HIDSMHKVTLEVKGETQ++N
Subjt:  QFSSASMTESPESNSVLPPDDGGAKAEETADVLVQYVVLRRDLIDSWALGSVVTQGCHASVSAIWLNKDDSHTLEYCSPGHIDSMHKVTLEVKGETQIVN

Query:  LSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSPFFKKLKLCK
        LSEKLK   I HKLW+EQPENIPTC+ATKPYPKS VS FFKKLKLCK
Subjt:  LSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSPFFKKLKLCK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGTTTGTAATTTCAGCATCTCGATTCACATTCTCCATTTCCAATTCCACGAAGCTCTGCTCGACAGCTAGGGTTTGGCCATCTTCTTCACTCGGTTTTCACAATTT
GAGTTGGAATTCCAGTCAATTTAGCTCAGCTTCGATGACTGAATCCCCTGAAAGTAACTCCGTTCTTCCACCGGACGACGGCGGAGCGAAGGCGGAGGAGACCGCCGACG
TTTTGGTTCAGTACGTGGTGCTTCGGAGAGATCTGATCGATTCGTGGGCGCTTGGAAGCGTCGTAACTCAGGGATGCCATGCTTCAGTTTCCGCCATTTGGTTGAACAAA
GATGATTCCCACACTTTGGAGTACTGTAGTCCTGGACACATTGATTCTATGCACAAGGTTACGCTTGAGGTGAAGGGAGAAACCCAAATCGTTAACTTATCAGAGAAACT
TAAAGCAAATTCAATCGTCCATAAACTGTGGATAGAACAACCAGAGAACATTCCAACATGTCTTGCCACAAAGCCCTACCCCAAATCTGTTGTATCACCATTTTTTAAAA
AGCTGAAACTCTGTAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGACGTTTGTAATTTCAGCATCTCGATTCACATTCTCCATTTCCAATTCCACGAAGCTCTGCTCGACAGCTAGGGTTTGGCCATCTTCTTCACTCGGTTTTCACAATTT
GAGTTGGAATTCCAGTCAATTTAGCTCAGCTTCGATGACTGAATCCCCTGAAAGTAACTCCGTTCTTCCACCGGACGACGGCGGAGCGAAGGCGGAGGAGACCGCCGACG
TTTTGGTTCAGTACGTGGTGCTTCGGAGAGATCTGATCGATTCGTGGGCGCTTGGAAGCGTCGTAACTCAGGGATGCCATGCTTCAGTTTCCGCCATTTGGTTGAACAAA
GATGATTCCCACACTTTGGAGTACTGTAGTCCTGGACACATTGATTCTATGCACAAGGTTACGCTTGAGGTGAAGGGAGAAACCCAAATCGTTAACTTATCAGAGAAACT
TAAAGCAAATTCAATCGTCCATAAACTGTGGATAGAACAACCAGAGAACATTCCAACATGTCTTGCCACAAAGCCCTACCCCAAATCTGTTGTATCACCATTTTTTAAAA
AGCTGAAACTCTGTAAGTGA
Protein sequenceShow/hide protein sequence
MTFVISASRFTFSISNSTKLCSTARVWPSSSLGFHNLSWNSSQFSSASMTESPESNSVLPPDDGGAKAEETADVLVQYVVLRRDLIDSWALGSVVTQGCHASVSAIWLNK
DDSHTLEYCSPGHIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSPFFKKLKLCK