; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0007756 (gene) of Chayote v1 genome

Gene IDSed0007756
OrganismSechium edule (Chayote v1)
Description50S ribosomal protein-like protein
Genome locationLG03:3960578..3961324
RNA-Seq ExpressionSed0007756
SyntenySed0007756
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6602699.1 hypothetical protein SDJN03_07932, partial [Cucurbita argyrosperma subsp. sororia]2.5e-5677.44Show/hide
Query:  MASLHKFKLLASQCAVAASPTRSPSASPVVHLRRRRRKTLRMLLNGPDRRRFPYQ---------DNNSDDETMIPEKSEKDQVRARRKLKDLFVSSPSPP
        MA+LHKFKLLASQCAV  SPTRSP+ASPV+HLRRRRRKTLRMLLN  DRRRFPYQ         D++ DDE MIPEK++K +VRARRKLKDLFVSS    
Subjt:  MASLHKFKLLASQCAVAASPTRSPSASPVVHLRRRRRKTLRMLLNGPDRRRFPYQ---------DNNSDDETMIPEKSEKDQVRARRKLKDLFVSSPSPP

Query:  PPLEDKVSDSRIEDQEGLLMADNPSTAGIGSTSTTRRFLRPISATFRYRFLRRAWRPVLVAIPE
        PPLEDKVSD+RIE+QEGLL A N S AGIG+TSTTRR LRPIS TFRYRFLRRAWRPVLVAIPE
Subjt:  PPLEDKVSDSRIEDQEGLLMADNPSTAGIGSTSTTRRFLRPISATFRYRFLRRAWRPVLVAIPE

XP_022960038.1 uncharacterized protein LOC111460905 [Cucurbita moschata]1.2e-5576.83Show/hide
Query:  MASLHKFKLLASQCAVAASPTRSPSASPVVHLRRRRRKTLRMLLNGPDRRRFPYQ---------DNNSDDETMIPEKSEKDQVRARRKLKDLFVSSPSPP
        MA+LHKFKLLASQCAV  SPTRSP+ASPV+HLRRRRRKTLRMLLN  DRRRFPYQ         D++ DDE MIPEK++K +V+ARRKLKDLFVSS    
Subjt:  MASLHKFKLLASQCAVAASPTRSPSASPVVHLRRRRRKTLRMLLNGPDRRRFPYQ---------DNNSDDETMIPEKSEKDQVRARRKLKDLFVSSPSPP

Query:  PPLEDKVSDSRIEDQEGLLMADNPSTAGIGSTSTTRRFLRPISATFRYRFLRRAWRPVLVAIPE
        PPLEDKVSD RIE+QEGLL A N S AGIG+TSTTRR LRPIS TFRYRFLRRAWRPVLVAIPE
Subjt:  PPLEDKVSDSRIEDQEGLLMADNPSTAGIGSTSTTRRFLRPISATFRYRFLRRAWRPVLVAIPE

XP_022990769.1 uncharacterized protein LOC111487551 [Cucurbita maxima]2.1e-5576.83Show/hide
Query:  MASLHKFKLLASQCAVAASPTRSPSASPVVHLRRRRRKTLRMLLNGPDRRRFPYQ---------DNNSDDETMIPEKSEKDQVRARRKLKDLFVSSPSPP
        MA+LHKFKLLASQCAV  SPTRSP+ASPV+HLRRRRRKTLRMLLN  DRRRFPYQ         D++ DDE MIPEK++K +VRARRKLKDLFVSS    
Subjt:  MASLHKFKLLASQCAVAASPTRSPSASPVVHLRRRRRKTLRMLLNGPDRRRFPYQ---------DNNSDDETMIPEKSEKDQVRARRKLKDLFVSSPSPP

Query:  PPLEDKVSDSRIEDQEGLLMADNPSTAGIGSTSTTRRFLRPISATFRYRFLRRAWRPVLVAIPE
        PPLED VSD RIE+QEGLL A N S AGIG+TSTTRR LRPIS TFRYRFLRRAWRPVLVAIPE
Subjt:  PPLEDKVSDSRIEDQEGLLMADNPSTAGIGSTSTTRRFLRPISATFRYRFLRRAWRPVLVAIPE

XP_023546418.1 uncharacterized protein LOC111805523 [Cucurbita pepo subsp. pepo]4.2e-5677.44Show/hide
Query:  MASLHKFKLLASQCAVAASPTRSPSASPVVHLRRRRRKTLRMLLNGPDRRRFPYQ---------DNNSDDETMIPEKSEKDQVRARRKLKDLFVSSPSPP
        MA+LHKFKLLASQCAV  SPTRSP+ASPV+HLRRRRRKTLRMLLN  DRRRFPYQ         D++ DDE MIPEK++K +VRARRKLKDLFVSS    
Subjt:  MASLHKFKLLASQCAVAASPTRSPSASPVVHLRRRRRKTLRMLLNGPDRRRFPYQ---------DNNSDDETMIPEKSEKDQVRARRKLKDLFVSSPSPP

Query:  PPLEDKVSDSRIEDQEGLLMADNPSTAGIGSTSTTRRFLRPISATFRYRFLRRAWRPVLVAIPE
        PPLEDKVSD RIE+QEGLL A N S AGIG+TSTTRR LRPIS TFRYRFLRRAWRPVLVAIPE
Subjt:  PPLEDKVSDSRIEDQEGLLMADNPSTAGIGSTSTTRRFLRPISATFRYRFLRRAWRPVLVAIPE

XP_038885993.1 uncharacterized protein LOC120076298 [Benincasa hispida]9.4e-5676.97Show/hide
Query:  MASLHKFKLLASQCAVAASPTRSPSASPVVHLRRRRRKTLRMLLNGPDRRRFPYQDNNS----------DDETMIPEKSEKDQVRARRKLKDLFVSSPSP
        MA+LHKFKLLASQCAVA SPTRSP+ASPV+HLRRRRRKTLRMLLN  DRRRFPYQDN++          D + MIPEK+EK +VRARRKLKDLFVSS   
Subjt:  MASLHKFKLLASQCAVAASPTRSPSASPVVHLRRRRRKTLRMLLNGPDRRRFPYQDNNS----------DDETMIPEKSEKDQVRARRKLKDLFVSSPSP

Query:  PPPLEDKVSDSRIEDQEGLLMADNPSTAGIGSTSTTRRFLRPISATFRYRFLRRAWRPVLVAIPE
         PPLEDKVSD RIE++EG L A N S AGIGS STTRR LRPISATFRYRFLRRAWRPVLVAIPE
Subjt:  PPPLEDKVSDSRIEDQEGLLMADNPSTAGIGSTSTTRRFLRPISATFRYRFLRRAWRPVLVAIPE

TrEMBL top hitse value%identityAlignment
A0A1S3B320 uncharacterized protein LOC1034854432.8e-5371.69Show/hide
Query:  MASLHKFKLLASQCAVAASPTRSPSASPVVHLRRRRRKTLRMLLNGPDRRRFPYQDNNSDDE-----------TMIPEKSEKDQVRARRKLKDLFVSSPS
        MA+LHKFKLLASQCAVA SPTRSP+ASP++HLRRRRRKTLRMLLN  DRRRFP+QDN++D +            +IPEK+EK +VRARRKLKDLFVSS  
Subjt:  MASLHKFKLLASQCAVAASPTRSPSASPVVHLRRRRRKTLRMLLNGPDRRRFPYQDNNSDDE-----------TMIPEKSEKDQVRARRKLKDLFVSSPS

Query:  PPPPLEDKVSDSRIEDQEGLLMADNPSTAGIGSTSTTRRFLRPISATFRYRFLRRAWRPVLVAIPE
         PPPLED++SD RIE+QE  + + N + AGIGS STTRR LRP+SATFRYRFLRRAWRPVLVAIPE
Subjt:  PPPPLEDKVSDSRIEDQEGLLMADNPSTAGIGSTSTTRRFLRPISATFRYRFLRRAWRPVLVAIPE

A0A5D3C5R9 Protein PCF11-like2.8e-5371.69Show/hide
Query:  MASLHKFKLLASQCAVAASPTRSPSASPVVHLRRRRRKTLRMLLNGPDRRRFPYQDNNSDDE-----------TMIPEKSEKDQVRARRKLKDLFVSSPS
        MA+LHKFKLLASQCAVA SPTRSP+ASP++HLRRRRRKTLRMLLN  DRRRFP+QDN++D +            +IPEK+EK +VRARRKLKDLFVSS  
Subjt:  MASLHKFKLLASQCAVAASPTRSPSASPVVHLRRRRRKTLRMLLNGPDRRRFPYQDNNSDDE-----------TMIPEKSEKDQVRARRKLKDLFVSSPS

Query:  PPPPLEDKVSDSRIEDQEGLLMADNPSTAGIGSTSTTRRFLRPISATFRYRFLRRAWRPVLVAIPE
         PPPLED++SD RIE+QE  + + N + AGIGS STTRR LRP+SATFRYRFLRRAWRPVLVAIPE
Subjt:  PPPPLEDKVSDSRIEDQEGLLMADNPSTAGIGSTSTTRRFLRPISATFRYRFLRRAWRPVLVAIPE

A0A6J1BYN1 uncharacterized protein LOC1110064613.8e-5577.44Show/hide
Query:  MASLHKFKLLASQCAVAASPTRSPSASPVVHLRRRRRKTLRMLLNGPDRRRFPYQDNNS---------DDETMIPEKSEKDQVRARRKLKDLFVSSPSPP
        MA+LHKFKLLASQC VA SPTRSP+ASPV+HLRRRRRKTLRMLLN  DRRRFPYQDN++         DDE MIPEK+EK +VRARRKLKDLFVSS    
Subjt:  MASLHKFKLLASQCAVAASPTRSPSASPVVHLRRRRRKTLRMLLNGPDRRRFPYQDNNS---------DDETMIPEKSEKDQVRARRKLKDLFVSSPSPP

Query:  PPLEDKVSDSRIEDQEGLLMADNPSTAGIGSTSTTRRFLRPISATFRYRFLRRAWRPVLVAIPE
        PP +DKVSD RIE+QEGLL A N S AGIG TSTTRR LRPIS+TFRYRFLRRAWRPVLVAIPE
Subjt:  PPLEDKVSDSRIEDQEGLLMADNPSTAGIGSTSTTRRFLRPISATFRYRFLRRAWRPVLVAIPE

A0A6J1H7N8 uncharacterized protein LOC1114609055.9e-5676.83Show/hide
Query:  MASLHKFKLLASQCAVAASPTRSPSASPVVHLRRRRRKTLRMLLNGPDRRRFPYQ---------DNNSDDETMIPEKSEKDQVRARRKLKDLFVSSPSPP
        MA+LHKFKLLASQCAV  SPTRSP+ASPV+HLRRRRRKTLRMLLN  DRRRFPYQ         D++ DDE MIPEK++K +V+ARRKLKDLFVSS    
Subjt:  MASLHKFKLLASQCAVAASPTRSPSASPVVHLRRRRRKTLRMLLNGPDRRRFPYQ---------DNNSDDETMIPEKSEKDQVRARRKLKDLFVSSPSPP

Query:  PPLEDKVSDSRIEDQEGLLMADNPSTAGIGSTSTTRRFLRPISATFRYRFLRRAWRPVLVAIPE
        PPLEDKVSD RIE+QEGLL A N S AGIG+TSTTRR LRPIS TFRYRFLRRAWRPVLVAIPE
Subjt:  PPLEDKVSDSRIEDQEGLLMADNPSTAGIGSTSTTRRFLRPISATFRYRFLRRAWRPVLVAIPE

A0A6J1JSX9 uncharacterized protein LOC1114875511.0e-5576.83Show/hide
Query:  MASLHKFKLLASQCAVAASPTRSPSASPVVHLRRRRRKTLRMLLNGPDRRRFPYQ---------DNNSDDETMIPEKSEKDQVRARRKLKDLFVSSPSPP
        MA+LHKFKLLASQCAV  SPTRSP+ASPV+HLRRRRRKTLRMLLN  DRRRFPYQ         D++ DDE MIPEK++K +VRARRKLKDLFVSS    
Subjt:  MASLHKFKLLASQCAVAASPTRSPSASPVVHLRRRRRKTLRMLLNGPDRRRFPYQ---------DNNSDDETMIPEKSEKDQVRARRKLKDLFVSSPSPP

Query:  PPLEDKVSDSRIEDQEGLLMADNPSTAGIGSTSTTRRFLRPISATFRYRFLRRAWRPVLVAIPE
        PPLED VSD RIE+QEGLL A N S AGIG+TSTTRR LRPIS TFRYRFLRRAWRPVLVAIPE
Subjt:  PPLEDKVSDSRIEDQEGLLMADNPSTAGIGSTSTTRRFLRPISATFRYRFLRRAWRPVLVAIPE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G66890.1 FUNCTIONS IN: molecular_function unknown1.2e-1943.45Show/hide
Query:  SLHKFKLLASQCAVAASPTRSPSASPVVHLRRRRRKTLRMLL-NGPDRRRFPYQDNNSDDETMIPEKSEKDQVRARRKLKDLFVSSPSPPPPLE------
        SL KFKLLA+ C+  A    SP+ SPV+HL  RRRKTLR+LL    DR R P   NN D+     +  ++ ++R+ RKL DLFVSS    PP E      
Subjt:  SLHKFKLLASQCAVAASPTRSPSASPVVHLRRRRRKTLRMLL-NGPDRRRFPYQDNNSDDETMIPEKSEKDQVRARRKLKDLFVSSPSPPPPLE------

Query:  --DKVSDSRIEDQEGLLMADNPSTAGIGSTSTTRRF-----LRPISA-TFRYRFLRRAWRPVLVAIPE
          DK +   +E +  + +    + AG G   T RR      +RP+S+ T R R LRR+WRPVLV IPE
Subjt:  --DKVSDSRIEDQEGLLMADNPSTAGIGSTSTTRRF-----LRPISA-TFRYRFLRRAWRPVLVAIPE

AT1G68430.1 unknown protein1.7e-1039.51Show/hide
Query:  MASLHKFKLLASQCAVAA-SPTRSPS--ASPVVHLRRRRRKTLRMLLN--GPDRRRFPYQDNNSDDETMIPEKSEKDQVRARRKLKDLFVSSPSPPPPLE
        MA+L +FK L +QC VAA SPTRSPS   SP+V L RR++ TL+MLL+   P RR          ++  +     KD   A RKLKDLFVSS S     E
Subjt:  MASLHKFKLLASQCAVAA-SPTRSPS--ASPVVHLRRRRRKTLRMLLN--GPDRRRFPYQDNNSDDETMIPEKSEKDQVRARRKLKDLFVSSPSPPPPLE

Query:  DKVSDSRI--EDQEGLLMADNPSTAGIGSTSTTRRFLRPISATFRYRFLRRAWRPVLVAIPE
        ++  D R   + +E +L A                   P+   F  R L+RAWRP L  I E
Subjt:  DKVSDSRI--EDQEGLLMADNPSTAGIGSTSTTRRFLRPISATFRYRFLRRAWRPVLVAIPE

AT5G16200.1 50S ribosomal protein-related7.7e-1640Show/hide
Query:  MASLHKFKLLAS----QCAVAASPTRSPSASPVVHLRRRRRKTLRMLL--NGPDRRR--------FPYQDNNSDDETMIPEKSEKDQVRARRKLKDLFVS
        ++ LHKFKL A+    + + A SPT SP+ SPV +L  RRRKTLRML   +   RRR         P  D NS +      K   +    RRKL++L V+
Subjt:  MASLHKFKLLAS----QCAVAASPTRSPSASPVVHLRRRRRKTLRMLL--NGPDRRR--------FPYQDNNSDDETMIPEKSEKDQVRARRKLKDLFVS

Query:  SPSPPPPLEDKVSDSRIEDQEGLLMADNPSTAGIGSTSTTRRFLRPISA-TFRYRFLRRAWRPVLVAIPE
        SPSPP    + +    I ++   +   N ++ G G   T RRF    S  +FR R LR+ WRPVLV+IPE
Subjt:  SPSPPPPLEDKVSDSRIEDQEGLLMADNPSTAGIGSTSTTRRFLRPISA-TFRYRFLRRAWRPVLVAIPE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCGTTGCATAAATTCAAGCTCTTAGCCTCCCAATGCGCCGTCGCCGCTAGCCCTACCCGTAGCCCCTCCGCTAGCCCCGTCGTCCACCTCCGCCGCCGCCGCCG
CAAAACCCTAAGAATGCTCCTCAATGGCCCCGATCGCCGCCGATTTCCTTATCAGGACAACAACTCCGACGATGAGACTATGATTCCGGAGAAGAGCGAGAAGGATCAGG
TCCGTGCCAGGAGGAAACTCAAGGATTTGTTCGTCTCGTCGCCGTCGCCACCGCCGCCGCTCGAGGATAAGGTTTCCGATAGCCGAATCGAAGATCAGGAGGGATTGTTG
ATGGCGGATAACCCTAGCACTGCCGGAATCGGTTCAACTTCCACCACTCGCCGGTTCTTGAGGCCGATATCGGCGACATTCCGATACAGGTTTCTCCGGCGAGCTTGGCG
GCCAGTTCTCGTCGCCATTCCAGAGTAG
mRNA sequenceShow/hide mRNA sequence
CACACTTTCTCAGTTCTCTCATCCCTAATTCAGATCTCTAACAAAATTGATTCCAAAATTTCAATTTCACAGAACAGAAATCAAGCAACGAATCTCTCAAAATTTCCAAT
GGCTTCGTTGCATAAATTCAAGCTCTTAGCCTCCCAATGCGCCGTCGCCGCTAGCCCTACCCGTAGCCCCTCCGCTAGCCCCGTCGTCCACCTCCGCCGCCGCCGCCGCA
AAACCCTAAGAATGCTCCTCAATGGCCCCGATCGCCGCCGATTTCCTTATCAGGACAACAACTCCGACGATGAGACTATGATTCCGGAGAAGAGCGAGAAGGATCAGGTC
CGTGCCAGGAGGAAACTCAAGGATTTGTTCGTCTCGTCGCCGTCGCCACCGCCGCCGCTCGAGGATAAGGTTTCCGATAGCCGAATCGAAGATCAGGAGGGATTGTTGAT
GGCGGATAACCCTAGCACTGCCGGAATCGGTTCAACTTCCACCACTCGCCGGTTCTTGAGGCCGATATCGGCGACATTCCGATACAGGTTTCTCCGGCGAGCTTGGCGGC
CAGTTCTCGTCGCCATTCCAGAGTAGAAGATTCTCCTTTCTGGTAAAATCTGTACGAAGAAATTCACTTTTGCCTTTACATTTTTATTTTTTTTCCTTTACATTTCTTTT
CATAATAAATTCCGACGAGTTGTCCAGCGGTAGAGATGAAGTAAGAGCAATGTAAATAAAAAATAATTTTGAAAAAATAAAATAAAT
Protein sequenceShow/hide protein sequence
MASLHKFKLLASQCAVAASPTRSPSASPVVHLRRRRRKTLRMLLNGPDRRRFPYQDNNSDDETMIPEKSEKDQVRARRKLKDLFVSSPSPPPPLEDKVSDSRIEDQEGLL
MADNPSTAGIGSTSTTRRFLRPISATFRYRFLRRAWRPVLVAIPE