; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0007758 (gene) of Chayote v1 genome

Gene IDSed0007758
OrganismSechium edule (Chayote v1)
Descriptionzf-RVT domain-containing protein
Genome locationLG10:7616861..7619163
RNA-Seq ExpressionSed0007758
SyntenySed0007758
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF4346094.1 hypothetical protein G4B88_009149 [Cannabis sativa]1.9e-2545.53Show/hide
Query:  LALEHLGHGPSYTWKRIIWGRDLLLKGLRKRIGNGANTMVFESPWIPRHSSFKIVTIPNEEVKTLRVADLINESGF-WNVEKIQNTLRQVDIDVVLSIPV
        + L ++G  PSY WK IIWGR+LL+KGLRKR+G G   +VF+ PW+PR  SFK  +  N     L V DL+ E+   WNV+ ++    + D   + SIP+
Subjt:  LALEHLGHGPSYTWKRIIWGRDLLLKGLRKRIGNGANTMVFESPWIPRHSSFKIVTIPNEEVKTLRVADLINESGF-WNVEKIQNTLRQVDIDVVLSIPV

Query:  CRTEAEDRWIWHFSKDGEFSVKS
        C+   ED W+WH++ DG +SVKS
Subjt:  CRTEAEDRWIWHFSKDGEFSVKS

KAG2334913.1 hypothetical protein Bca52824_006093 [Brassica carinata]4.4e-2728.62Show/hide
Query:  DDPDCIEKVKAGWNEWGNSSKGLI-ESLNDCRSLLWGWGRNLKKMKWDALRRLRNLIREEFLNPRGPDFVKIHHIEDDLNSLVLAEEKYWKQRSRTNWFH
        ++P+  E V+  WN   N S   + + +  CR  L  W RN        + R R  + EE           +H IE         EE+YWK +S+ NW  
Subjt:  DDPDCIEKVKAGWNEWGNSSKGLI-ESLNDCRSLLWGWGRNLKKMKWDALRRLRNLIREEFLNPRGPDFVKIHHIEDDLNSLVLAEEKYWKQRSRTNWFH

Query:  WGDHNTRWFHKKASLRKDRNFVSGVLDNSEVWVESNIGMKNAFKDHFSQIFTSSNPR-------------VDQMDLAL-EHL-------------GHGPS
         GD NT+ FH  A  RK +NF++ + D   +   S          +F+++F++S P               +QM+L L +H+              + PS
Subjt:  WGDHNTRWFHKKASLRKDRNFVSGVLDNSEVWVESNIGMKNAFKDHFSQIFTSSNPR-------------VDQMDLAL-EHL-------------GHGPS

Query:  YTWKRIIWGRDLLLKGLRKRIGNGANTMVFESPWIPRHSSFKIVTIPNEEVKTLRVADLINESGFWNVEKIQNTLRQVDIDVVLSIPVCRTEAEDRWIWH
        Y W+ II+GR+LL+KGL K IGNG +T+V+   WI      + V         L+V  L++++G WNVE +       ++  +  +  C  E  D ++W 
Subjt:  YTWKRIIWGRDLLLKGLRKRIGNGANTMVFESPWIPRHSSFKIVTIPNEEVKTLRVADLINESGFWNVEKIQNTLRQVDIDVVLSIPVCRTEAEDRWIWH

Query:  FSKDGEFSVKS
        +S+ G ++VK+
Subjt:  FSKDGEFSVKS

KAG7572583.1 Ribonuclease H-like superfamily [Arabidopsis suecica]2.5e-3027.67Show/hide
Query:  IEKVKAGWNEWGNSSKG-LIESLNDCRSLLWGWGRNLKKMKWDALRRLRN---LIREEFLNPRGPDFVKIHHIEDDLNSLVLAEEKYWKQRSRTNWFHWG
        +E +  GWN      +G  +E L +CR  +  W ++L       +  L++   L + + L PR     +I  +   L      EE YW Q+SR+     G
Subjt:  IEKVKAGWNEWGNSSKG-LIESLNDCRSLLWGWGRNLKKMKWDALRRLRN---LIREEFLNPRGPDFVKIHHIEDDLNSLVLAEEKYWKQRSRTNWFHWG

Query:  DHNTRWFHKKASLRKDRNFVSGVLDNSEVWVESNIGMKNAFKDHFSQIFTSSNPRVDQMDLA----------------------------------LEHL
        D+N+++FH     R+ RN ++G+ D + +W   +  ++N    +F ++FT++ P   +  LA                                  LE++
Subjt:  DHNTRWFHKKASLRKDRNFVSGVLDNSEVWVESNIGMKNAFKDHFSQIFTSSNPRVDQMDLA----------------------------------LEHL

Query:  -GHGPSYTWKRIIWGRDLLLKGLRKRIGNGANTMVFESPWIPRHSSFKIVTIPNEEVKTLRVADLI-NESGFWNVEKIQNTLRQVDIDVVLSIPVCRTEA
          + PSY W+ I   R L+ KGL KR+G+G +  V+E PWIP        +  +    +L+V DLI + S FWN++ ++      D+ ++ +IPV     
Subjt:  -GHGPSYTWKRIIWGRDLLLKGLRKRIGNGANTMVFESPWIPRHSSFKIVTIPNEEVKTLRVADLI-NESGFWNVEKIQNTLRQVDIDVVLSIPVCRTEA

Query:  EDRWIWHFSKDGEFSVKS
        ED   WHF+K G ++VKS
Subjt:  EDRWIWHFSKDGEFSVKS

PKA49974.1 Putative ribonuclease H protein [Apostasia shenzhenica]3.7e-2644.72Show/hide
Query:  DLALEHLGHGPSYTWKRIIWGRDLLLKGLRKRIGNGANTMVFESPWIPRHSSFKIVTIPNEEVKTLRVADLINESGFWNVEKIQNTLRQVDIDVVLSIPV
        D  +       SY W+ I+WGRDLL  GLR RIGNG +  VF  PW+PR  SF+ +T PN  +   R+ +L+ E G WN EKI + L  +D  ++L +P 
Subjt:  DLALEHLGHGPSYTWKRIIWGRDLLLKGLRKRIGNGANTMVFESPWIPRHSSFKIVTIPNEEVKTLRVADLINESGFWNVEKIQNTLRQVDIDVVLSIPV

Query:  CRTEAEDRWIWHFSKDGEFSVKS
        C T+ +D  IWH+ K G +SVKS
Subjt:  CRTEAEDRWIWHFSKDGEFSVKS

XP_030505522.1 uncharacterized protein LOC115720515 [Cannabis sativa]1.9e-2548.67Show/hide
Query:  PSYTWKRIIWGRDLLLKGLRKRIGNGANTMVFESPWIPRHSSFKIVTIPNEEVKTLRVADLINESGFWNVEKIQNTLRQVDIDVVLSIPVCRTEAEDRWI
        PS  W+ I+WG++LL+KGLR+RIGNGANT VF+ PWIPR  SF  + I  E    + V++LI +SG WN++ I       D  ++LSIP+   E +D W+
Subjt:  PSYTWKRIIWGRDLLLKGLRKRIGNGANTMVFESPWIPRHSSFKIVTIPNEEVKTLRVADLINESGFWNVEKIQNTLRQVDIDVVLSIPVCRTEAEDRWI

Query:  WHFSKDGEFSVKS
        WHF+  G +SVKS
Subjt:  WHFSKDGEFSVKS

XP_030505522.1 uncharacterized protein LOC115720515 [Cannabis sativa]4.7e-1328.92Show/hide
Query:  DPDCIEKVKAGWNEWGNSSKGLIES-LNDCRSLLWGWGRNLKKMKWDALRRLRNLIRE-EFLNPRGPDFVKIHHIEDDLNSLVLAEEKYWKQRSRTNWFH
        + +C   +K  W+    SS   I S +  C + L  W R       + ++   + I E   L        ++  +E+ LN L+  EE YWKQRSR  W  
Subjt:  DPDCIEKVKAGWNEWGNSSKGLIES-LNDCRSLLWGWGRNLKKMKWDALRRLRNLIRE-EFLNPRGPDFVKIHHIEDDLNSLVLAEEKYWKQRSRTNWFH

Query:  WGDHNTRWFHKKASLRKDRNFVSGVLDNSEVWVESNIGMKNAFKDHFSQIFTSSNPRVDQMDLALE
         GD NT++FH+KA  R+  N + G+L+    W      M     + + Q+FT+  P + +++  LE
Subjt:  WGDHNTRWFHKKASLRKDRNFVSGVLDNSEVWVESNIGMKNAFKDHFSQIFTSSNPRVDQMDLALE

TrEMBL top hitse value%identityAlignment
A0A2I0A354 Ribonuclease H protein1.8e-2644.72Show/hide
Query:  DLALEHLGHGPSYTWKRIIWGRDLLLKGLRKRIGNGANTMVFESPWIPRHSSFKIVTIPNEEVKTLRVADLINESGFWNVEKIQNTLRQVDIDVVLSIPV
        D  +       SY W+ I+WGRDLL  GLR RIGNG +  VF  PW+PR  SF+ +T PN  +   R+ +L+ E G WN EKI + L  +D  ++L +P 
Subjt:  DLALEHLGHGPSYTWKRIIWGRDLLLKGLRKRIGNGANTMVFESPWIPRHSSFKIVTIPNEEVKTLRVADLINESGFWNVEKIQNTLRQVDIDVVLSIPV

Query:  CRTEAEDRWIWHFSKDGEFSVKS
        C T+ +D  IWH+ K G +SVKS
Subjt:  CRTEAEDRWIWHFSKDGEFSVKS

A0A7J6DJ25 Uncharacterized protein9.0e-2645.53Show/hide
Query:  LALEHLGHGPSYTWKRIIWGRDLLLKGLRKRIGNGANTMVFESPWIPRHSSFKIVTIPNEEVKTLRVADLINESGF-WNVEKIQNTLRQVDIDVVLSIPV
        + L ++G  PSY WK IIWGR+LL+KGLRKR+G G   +VF+ PW+PR  SFK  +  N     L V DL+ E+   WNV+ ++    + D   + SIP+
Subjt:  LALEHLGHGPSYTWKRIIWGRDLLLKGLRKRIGNGANTMVFESPWIPRHSSFKIVTIPNEEVKTLRVADLINESGF-WNVEKIQNTLRQVDIDVVLSIPV

Query:  CRTEAEDRWIWHFSKDGEFSVKS
        C+   ED W+WH++ DG +SVKS
Subjt:  CRTEAEDRWIWHFSKDGEFSVKS

A0A803MJ30 Uncharacterized protein1.3e-2928.62Show/hide
Query:  DPDCIEKVKAGWNEWGNSSKGLIESLNDCRSLLWGWGR----NLKKMKWDALRRLRNLIREEFLNPRGPDFVKIHHIEDDLNSLVLAEEKYWKQRSRTNW
        +  C + ++  W   G+ S     ++    + L GW +    N  K   D    +  L+ +E   P   +  ++  I++ ++ L   EE +WKQRSR  W
Subjt:  DPDCIEKVKAGWNEWGNSSKGLIESLNDCRSLLWGWGR----NLKKMKWDALRRLRNLIREEFLNPRGPDFVKIHHIEDDLNSLVLAEEKYWKQRSRTNW

Query:  FHWGDHNTRWFHKKASLRKDRNFVSGVLDN-----------SEVW---VESNIGMKNAFKDHFSQIFTSSNPRVDQMDLALEHLGHGPSYTWKRIIWGRD
           GD N+++FH KA  R+ RN +  + D            +EVW     S+  M    K  +        P  + M+  +       S+TW+ ++  R+
Subjt:  FHWGDHNTRWFHKKASLRKDRNFVSGVLDN-----------SEVW---VESNIGMKNAFKDHFSQIFTSSNPRVDQMDLALEHLGHGPSYTWKRIIWGRD

Query:  LLLKGLRKRIGNGANTMVFESPWIPRHSSFKIV---TIPNEEVKTLRVADLINESGFWNVEKIQNTLRQVDIDVVLSIPVCRTEAEDRWIWHFSKDGEFS
        L+ KG RK IG G +T +++ PW+P   +F+++     P E   T  VADLI++ G WN+  + +   Q +++ +  IPV R   ++ W WHF+K G+FS
Subjt:  LLLKGLRKRIGNGANTMVFESPWIPRHSSFKIV---TIPNEEVKTLRVADLINESGFWNVEKIQNTLRQVDIDVVLSIPVCRTEAEDRWIWHFSKDGEFS

Query:  VKSA
        V+SA
Subjt:  VKSA

A0A803MVI4 Uncharacterized protein2.4e-2627.59Show/hide
Query:  DPDCIEKVKAGWNEWGNSSKGLIESLNDCRSLLWGWGRNLKKMKWDALRRLRNLIREEFLNPRGPDFVKIH-----HIEDDLNSLVLAEEKYWKQRSRTN
        +PDC + +KA W +  +S +     L+ C S L  W        +  ++R      E+    +G     ++      +  +L+ L L EE YW  R+R N
Subjt:  DPDCIEKVKAGWNEWGNSSKGLIESLNDCRSLLWGWGRNLKKMKWDALRRLRNLIREEFLNPRGPDFVKIH-----HIEDDLNSLVLAEEKYWKQRSRTN

Query:  WFHWGDHNTRWFHKKASLRKDRNFVSGVLDNSEVWVESNIGMKNAFKDHFSQIFTSSNPRVDQMDLALEHLGHGPSYTWKRIIWGRDLLLKGLRKRIGNG
         F  GD NT +FH KA+ R+ RN + G+ +N+  WV +  G++                            GH PS+TW+ I   + LL+ G+R  +GNG
Subjt:  WFHWGDHNTRWFHKKASLRKDRNFVSGVLDNSEVWVESNIGMKNAFKDHFSQIFTSSNPRVDQMDLALEHLGHGPSYTWKRIIWGRDLLLKGLRKRIGNG

Query:  ANTMVFESPWIPRHSSFKIVTIPNEEV--KTLRVADLINES-GFWNVEKIQNTLRQVDIDVVLSIPVCRTEAEDRWIWHFSKDGEFSVKS
         N  V++  W+   ++F + + P   +    + V+DLI+   G W++  +   L   DI+ VL IP+ ++   D   W  + DG ++VK+
Subjt:  ANTMVFESPWIPRHSSFKIVTIPNEEV--KTLRVADLINES-GFWNVEKIQNTLRQVDIDVVLSIPVCRTEAEDRWIWHFSKDGEFSVKS

A0A803QEQ9 Uncharacterized protein1.0e-2927.73Show/hide
Query:  CIEKVKAGWNEWGNSS-KGLIESLNDCRSLLWGWG----RNLKKMKWDALRRLRNLIREEFLNPRGPDFVKIHHIEDDLNSLVLAEEKYWKQRSRTNWFH
        C + + A W+   +S    L  ++++C S L  W      NLK+   ++ + +  L      +P+   F  + + E  L+ L+  EE YW QR+R +W  
Subjt:  CIEKVKAGWNEWGNSS-KGLIESLNDCRSLLWGWG----RNLKKMKWDALRRLRNLIREEFLNPRGPDFVKIHHIEDDLNSLVLAEEKYWKQRSRTNWFH

Query:  WGDHNTRWFHKKASLRKDRNFVSGVLDNSEVWVESNIGMKNAFKDHFSQIFTSSNPRVDQMDLALEHL--------------------------------
         GD NT++FH++A+ R   N +  + D +     S   + +  + +F  IF S       ++  LE +                                
Subjt:  WGDHNTRWFHKKASLRKDRNFVSGVLDNSEVWVESNIGMKNAFKDHFSQIFTSSNPRVDQMDLALEHL--------------------------------

Query:  -----GHGPSYTWKRIIWGRDLLLKGLRKRIGNGANTMVFESPWIPRHSSFKIVTIPNEEVKTLRVADLINESGFWNVEKIQNTLRQVDIDVVLSIPVCR
             G  PS TW+ I+WG++LL KGLR R+GNG   +    PW+P H+ F        +  +L+VADLI +   W++  I     Q DID +LSIP+  
Subjt:  -----GHGPSYTWKRIIWGRDLLLKGLRKRIGNGANTMVFESPWIPRHSSFKIVTIPNEEVKTLRVADLINESGFWNVEKIQNTLRQVDIDVVLSIPVCR

Query:  TEAEDRWIWHFSKDGEFSVKS
          ++D  IW+ +  G + VKS
Subjt:  TEAEDRWIWHFSKDGEFSVKS

SwissProt top hitse value%identityAlignment
P93295 Uncharacterized mitochondrial protein AtMg003102.5e-0448.78Show/hide
Query:  LGHGPSYTWKRIIWGRDLLLKGLRKRIGNGANTMVFESPWI
        +G  PSY W+ II GR+LL +GL + IG+G +T V+   WI
Subjt:  LGHGPSYTWKRIIWGRDLLLKGLRKRIGNGANTMVFESPWI

Arabidopsis top hitse value%identityAlignment
AT2G22440.1 BEST Arabidopsis thaliana protein match is: Ribonuclease H-like superfamily protein (TAIR:AT4G29090.1)4.9e-0833.72Show/hide
Query:  TMVFESPWIPRHSSFKIVTIPNEEVKTLRVADLINE-SGFWNVEKIQNTLRQVDIDVVLSIPVCRTEAEDRWIWHFSKDGEFSVKS
        T V++ PWIP   +    +I N     L V DLI++ +  W ++++Q  +  VDI ++L I   RT   D + W  +K G ++VKS
Subjt:  TMVFESPWIPRHSSFKIVTIPNEEVKTLRVADLINE-SGFWNVEKIQNTLRQVDIDVVLSIPVCRTEAEDRWIWHFSKDGEFSVKS

AT3G09510.1 Ribonuclease H-like superfamily protein1.3e-0828.7Show/hide
Query:  SYTWKRIIWGRDLLLKGLRKRIGNGANTMVFESPWIPRHSSFKIVTIPNEEVKTLRVADLINESG---FWNVEKIQNTLRQVDIDVVLSIPVCRTEAEDR
        SY W  ++ G  LL KG R  IG+G N  +     +  H    + T   E  K + + +L    G   FW+  KI   + Q D   +  I + +++  D+
Subjt:  SYTWKRIIWGRDLLLKGLRKRIGNGANTMVFESPWIPRHSSFKIVTIPNEEVKTLRVADLINESG---FWNVEKIQNTLRQVDIDVVLSIPVCRTEAEDR

Query:  WIWHFSKDGEFSVKS
         IW+++  GE++V+S
Subjt:  WIWHFSKDGEFSVKS

ATMG00310.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein1.7e-0548.78Show/hide
Query:  LGHGPSYTWKRIIWGRDLLLKGLRKRIGNGANTMVFESPWI
        +G  PSY W+ II GR+LL +GL + IG+G +T V+   WI
Subjt:  LGHGPSYTWKRIIWGRDLLLKGLRKRIGNGANTMVFESPWI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGACCCAGATTGCATTGAAAAGGTAAAAGCTGGTTGGAATGAATGGGGGAATAGCTCAAAAGGTCTAATTGAGTCCTTAAATGATTGTAGATCCCTTCTGTGGGG
ATGGGGGAGGAATCTTAAAAAGATGAAATGGGATGCTTTGAGGAGATTGAGAAATCTTATAAGAGAGGAGTTTTTGAATCCTCGTGGTCCTGATTTTGTGAAAATTCACC
ATATTGAAGATGATCTTAATTCTCTTGTGCTTGCTGAAGAAAAATACTGGAAGCAGCGCTCTAGAACAAATTGGTTTCATTGGGGGGATCATAACACTCGTTGGTTTCAT
AAAAAAGCTTCTTTGCGTAAAGACAGAAATTTCGTTAGTGGTGTTCTGGATAATTCAGAAGTTTGGGTGGAATCTAATATTGGCATGAAGAATGCTTTCAAGGATCACTT
TTCTCAGATATTCACTTCCTCTAATCCTAGAGTGGATCAGATGGACTTGGCTTTAGAACATTTGGGGCATGGTCCTTCTTACACATGGAAAAGAATTATTTGGGGAAGGG
ATCTGTTATTAAAAGGTCTTCGCAAACGCATTGGTAATGGTGCTAACACTATGGTATTTGAATCTCCCTGGATCCCCCGTCATTCTTCCTTTAAAATTGTAACGATTCCA
AATGAGGAAGTTAAAACTCTGCGTGTTGCTGATCTTATTAATGAATCTGGTTTTTGGAATGTTGAAAAGATCCAAAACACACTCAGGCAAGTTGATATTGATGTTGTTCT
TTCAATTCCGGTGTGTAGAACAGAGGCAGAAGATCGTTGGATTTGGCATTTTTCAAAGGATGGAGAATTTTCAGTCAAAAGTGCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGATGACCCAGATTGCATTGAAAAGGTAAAAGCTGGTTGGAATGAATGGGGGAATAGCTCAAAAGGTCTAATTGAGTCCTTAAATGATTGTAGATCCCTTCTGTGGGG
ATGGGGGAGGAATCTTAAAAAGATGAAATGGGATGCTTTGAGGAGATTGAGAAATCTTATAAGAGAGGAGTTTTTGAATCCTCGTGGTCCTGATTTTGTGAAAATTCACC
ATATTGAAGATGATCTTAATTCTCTTGTGCTTGCTGAAGAAAAATACTGGAAGCAGCGCTCTAGAACAAATTGGTTTCATTGGGGGGATCATAACACTCGTTGGTTTCAT
AAAAAAGCTTCTTTGCGTAAAGACAGAAATTTCGTTAGTGGTGTTCTGGATAATTCAGAAGTTTGGGTGGAATCTAATATTGGCATGAAGAATGCTTTCAAGGATCACTT
TTCTCAGATATTCACTTCCTCTAATCCTAGAGTGGATCAGATGGACTTGGCTTTAGAACATTTGGGGCATGGTCCTTCTTACACATGGAAAAGAATTATTTGGGGAAGGG
ATCTGTTATTAAAAGGTCTTCGCAAACGCATTGGTAATGGTGCTAACACTATGGTATTTGAATCTCCCTGGATCCCCCGTCATTCTTCCTTTAAAATTGTAACGATTCCA
AATGAGGAAGTTAAAACTCTGCGTGTTGCTGATCTTATTAATGAATCTGGTTTTTGGAATGTTGAAAAGATCCAAAACACACTCAGGCAAGTTGATATTGATGTTGTTCT
TTCAATTCCGGTGTGTAGAACAGAGGCAGAAGATCGTTGGATTTGGCATTTTTCAAAGGATGGAGAATTTTCAGTCAAAAGTGCCTAG
Protein sequenceShow/hide protein sequence
MDDPDCIEKVKAGWNEWGNSSKGLIESLNDCRSLLWGWGRNLKKMKWDALRRLRNLIREEFLNPRGPDFVKIHHIEDDLNSLVLAEEKYWKQRSRTNWFHWGDHNTRWFH
KKASLRKDRNFVSGVLDNSEVWVESNIGMKNAFKDHFSQIFTSSNPRVDQMDLALEHLGHGPSYTWKRIIWGRDLLLKGLRKRIGNGANTMVFESPWIPRHSSFKIVTIP
NEEVKTLRVADLINESGFWNVEKIQNTLRQVDIDVVLSIPVCRTEAEDRWIWHFSKDGEFSVKSA