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Sed0007762 (gene) of Chayote v1 genome

Gene IDSed0007762
OrganismSechium edule (Chayote v1)
DescriptionNAC domain-containing protein
Genome locationLG02:44235924..44236778
RNA-Seq ExpressionSed0007762
SyntenySed0007762
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0009299 - mRNA transcription (biological process)
GO:0009416 - response to light stimulus (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR003441 - NAC domain
IPR036093 - NAC domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7017325.1 NAC domain-containing protein 96, partial [Cucurbita argyrosperma subsp. argyrosperma]2.8e-3753.38Show/hide
Query:  SFTLPVVDLYTQEPSLLWQPFGGIDGQDFFCFTTLNKKKSRIVRKVASNGATWSGENKATRVFSEAIGAFIGSVKRFHYE-NPKLKGSIEDCSWTMYEYT
        S +LPV+D+Y+ EP+++WQ  GG++ +D + FTTL KKKSRI+RKV  NG TWSGE+K  +VFS A  A IG++KRFHYE +  +  + +DCSW M+EYT
Subjt:  SFTLPVVDLYTQEPSLLWQPFGGIDGQDFFCFTTLNKKKSRIVRKVASNGATWSGENKATRVFSEAIGAFIGSVKRFHYE-NPKLKGSIEDCSWTMYEYT

Query:  LDPAFVPKGKAHDSYVLCKIRKRIVKTVRKGVPTFVQ-PLASWPPTTS
        LDP  +  G  HDSYV+C IRKRI+K VR  V + +Q P     PTT+
Subjt:  LDPAFVPKGKAHDSYVLCKIRKRIVKTVRKGVPTFVQ-PLASWPPTTS

KGN65836.2 hypothetical protein Csa_019715 [Cucumis sativus]3.6e-3755.17Show/hide
Query:  LPVVDLYTQEPSLLWQPFGGIDGQDFFCFTTLNKKKSRIVRKVASNGATWSGENKATRVFSEAI-GAFIGSVKRFHYENPKLKGSIEDCSWTMYEYTLDP
        LPV+DLYTQEPS +WQ   G+D QD + FTTL KKKSRI+RK+ SNG TWSGENK  +VFS  I    +G++KRF YE  ++K   EDC+W MYEYTL+P
Subjt:  LPVVDLYTQEPSLLWQPFGGIDGQDFFCFTTLNKKKSRIVRKVASNGATWSGENKATRVFSEAI-GAFIGSVKRFHYENPKLKGSIEDCSWTMYEYTLDP

Query:  AFVPKGKAHDSYVLCKIRKRIVKTVRKGVPTFVQPLA--SWPPTT
        + VP+G  HDSYVLC IRK+IVK+ +  + +  +  +  +WP T+
Subjt:  AFVPKGKAHDSYVLCKIRKRIVKTVRKGVPTFVQPLA--SWPPTT

XP_008443570.1 PREDICTED: NAC domain-containing protein 105-like [Cucumis melo]4.5e-4058.17Show/hide
Query:  LPVVDLYTQEPSLLWQPFGGIDGQDFFCFTTLNKKKSRIVRKVASNGATWSGENKATRVFSEAIG-AFIGSVKRFHYENPKLKG--SIEDCSWTMYEYTL
        LPV+DLY  EPS +WQ  GG+D QD + FTTL KKKSRI+RKV SNG TWS EN+A +VFS  I    +GSVKRFHY+ PK K    I DC+W MYEYTL
Subjt:  LPVVDLYTQEPSLLWQPFGGIDGQDFFCFTTLNKKKSRIVRKVASNGATWSGENKATRVFSEAIG-AFIGSVKRFHYENPKLKG--SIEDCSWTMYEYTL

Query:  DPAFVPKGKAHDSYVLCKIRKRIVKTVRKGVPTFVQPLASWPPTTSVPAPTQT
        DP+ VPKG  HDSYVLC IRK+IVK+ +  + +  + ++S  PTTS+    QT
Subjt:  DPAFVPKGKAHDSYVLCKIRKRIVKTVRKGVPTFVQPLASWPPTTSVPAPTQT

XP_023528741.1 transcription factor JUNGBRUNNEN 1-like [Cucurbita pepo subsp. pepo]4.7e-3753.38Show/hide
Query:  SFTLPVVDLYTQEPSLLWQPFGGIDGQDFFCFTTLNKKKSRIVRKVASNGATWSGENKATRVFSEAIGAFIGSVKRFHYE-NPKLKGSIEDCSWTMYEYT
        S +LPV+D+Y+ EP+++WQ  GG++ +D + FTTL KKKSRI+RKV  NG TWSGE+K  +VFS A  A IG++KRFHYE +  +  + +DCSW M+EYT
Subjt:  SFTLPVVDLYTQEPSLLWQPFGGIDGQDFFCFTTLNKKKSRIVRKVASNGATWSGENKATRVFSEAIGAFIGSVKRFHYE-NPKLKGSIEDCSWTMYEYT

Query:  LDPAFVPKGKAHDSYVLCKIRKRIVKTVRKGVPTFVQ-PLASWPPTTS
        LDP  +  G  HDSYV+C IRKRI+K VR  V + +Q P     PTT+
Subjt:  LDPAFVPKGKAHDSYVLCKIRKRIVKTVRKGVPTFVQ-PLASWPPTTS

XP_038880323.1 NAC domain-containing protein 96-like [Benincasa hispida]4.5e-4043.21Show/hide
Query:  LPVVDLYTQEPSLLWQPFGGIDGQDFFCFTTLNKKKSRIVRKVASNGATWSGENKATRVFSEAIGAFIGSVKRFHYENPKLKGSIEDCSWTMYEYTLDPA
        L V+DLY +EPS +WQ  GGIDGQD + FT L KKKSR++RKV SNGATWSGENKA  VFS    A IGSVKRFHYEN K+K + ++ SW MYEYTL P 
Subjt:  LPVVDLYTQEPSLLWQPFGGIDGQDFFCFTTLNKKKSRIVRKVASNGATWSGENKATRVFSEAIGAFIGSVKRFHYENPKLKGSIEDCSWTMYEYTLDPA

Query:  FVPKGKAHDSYVLCKIRKRIVKTVRKGVPTFVQPLASWPPTTSVPAPTQTLASSRPTTSVPAPTQTLASSRPTTSVPAPTQTLASSRPTTSMEVYEQNHP
        FVPKG  HDS+VLCK+R +I+K  ++ + T +Q   S+ P   +P  T+      P                      P +     +    +E       
Subjt:  FVPKGKAHDSYVLCKIRKRIVKTVRKGVPTFVQPLASWPPTTSVPAPTQTLASSRPTTSVPAPTQTLASSRPTTSVPAPTQTLASSRPTTSMEVYEQNHP

Query:  IPAEMENYDPNMTFTEDEIRQLLVHMDLK-PVVQENHVPPSNL
        I  E +       FTED+I+QL+   +L+ P +QE+ + P N+
Subjt:  IPAEMENYDPNMTFTEDEIRQLLVHMDLK-PVVQENHVPPSNL

TrEMBL top hitse value%identityAlignment
A0A1S3B8F1 NAC domain-containing protein 105-like2.2e-4058.17Show/hide
Query:  LPVVDLYTQEPSLLWQPFGGIDGQDFFCFTTLNKKKSRIVRKVASNGATWSGENKATRVFSEAIG-AFIGSVKRFHYENPKLKG--SIEDCSWTMYEYTL
        LPV+DLY  EPS +WQ  GG+D QD + FTTL KKKSRI+RKV SNG TWS EN+A +VFS  I    +GSVKRFHY+ PK K    I DC+W MYEYTL
Subjt:  LPVVDLYTQEPSLLWQPFGGIDGQDFFCFTTLNKKKSRIVRKVASNGATWSGENKATRVFSEAIG-AFIGSVKRFHYENPKLKG--SIEDCSWTMYEYTL

Query:  DPAFVPKGKAHDSYVLCKIRKRIVKTVRKGVPTFVQPLASWPPTTSVPAPTQT
        DP+ VPKG  HDSYVLC IRK+IVK+ +  + +  + ++S  PTTS+    QT
Subjt:  DPAFVPKGKAHDSYVLCKIRKRIVKTVRKGVPTFVQPLASWPPTTSVPAPTQT

A0A5A7TSB0 NAC domain-containing protein 105-like protein2.1e-3564.66Show/hide
Query:  LPVVDLYTQEPSLLWQPFGGIDGQDFFCFTTLNKKKSRIVRKVASNGATWSGENKATRVFSEAIG-AFIGSVKRFHYENPKLKG--SIEDCSWTMYEYTL
        LPV+DLY  EPS +WQ  GG+D QD + FTTL KKKSRI+RKV SNG TWS EN+A +VFS  I    +GSVKRFHY+ PK K    I DC+W MYEYTL
Subjt:  LPVVDLYTQEPSLLWQPFGGIDGQDFFCFTTLNKKKSRIVRKVASNGATWSGENKATRVFSEAIG-AFIGSVKRFHYENPKLKG--SIEDCSWTMYEYTL

Query:  DPAFVPKGKAHDSYVL
        DP+ VPKG  HDSYVL
Subjt:  DPAFVPKGKAHDSYVL

A0A5A7UPM7 NAC domain-containing protein 105-like protein2.1e-3557.94Show/hide
Query:  LPVVDLYTQEPSLLWQPFGGIDGQDFFCFTTLNKKKSRIVRKVASNGATWSGENKATRVFSEAIGAFIGSVKRFHYENPKLKGSIEDC----SWTMYEYT
        LPV+D+YTQEP  +W+  GG++G+D   FTTL K+KSRI+RKV SNGA WSGE+KAT+VFS      +G+ KRFHYEN K+   ++DC    SW MYEYT
Subjt:  LPVVDLYTQEPSLLWQPFGGIDGQDFFCFTTLNKKKSRIVRKVASNGATWSGENKATRVFSEAIGAFIGSVKRFHYENPKLKGSIEDC----SWTMYEYT

Query:  LDPAFVPKGKAHDSYVLCKIRKRIVK
        L P  VP+G  HDS+VLC +RK+I+K
Subjt:  LDPAFVPKGKAHDSYVLCKIRKRIVK

A0A5D3BHG6 NAC domain-containing protein 105-like protein2.1e-3557.94Show/hide
Query:  LPVVDLYTQEPSLLWQPFGGIDGQDFFCFTTLNKKKSRIVRKVASNGATWSGENKATRVFSEAIGAFIGSVKRFHYENPKLKGSIEDC----SWTMYEYT
        LPV+D+YTQEP  +W+  GG++G+D   FTTL K+KSRI+RKV SNGA WSGE+KAT+VFS      +G+ KRFHYEN K+   ++DC    SW MYEYT
Subjt:  LPVVDLYTQEPSLLWQPFGGIDGQDFFCFTTLNKKKSRIVRKVASNGATWSGENKATRVFSEAIGAFIGSVKRFHYENPKLKGSIEDC----SWTMYEYT

Query:  LDPAFVPKGKAHDSYVLCKIRKRIVK
        L P  VP+G  HDS+VLC +RK+I+K
Subjt:  LDPAFVPKGKAHDSYVLCKIRKRIVK

A0A6J1F881 NAC domain-containing protein 96-like2.1e-3556.45Show/hide
Query:  FTLPVVDLYTQEPSLLWQPFGGIDGQDFFCFTTLNKKKSRIVRKVASNGATWSGENKATRVF-SEAIGAFIGSVKRFHYENPKLKGSIEDCSWTMYEYTL
        + LPVVDLY++EPS+LWQ +GGID Q    FT L KKKSR++RKV SNG TWSGE+ A ++F S+     +G++KRFHYEN K++ S E+CSW M+EYT+
Subjt:  FTLPVVDLYTQEPSLLWQPFGGIDGQDFFCFTTLNKKKSRIVRKVASNGATWSGENKATRVF-SEAIGAFIGSVKRFHYENPKLKGSIEDCSWTMYEYTL

Query:  DPAFVPKGKAHDSYVLCKIRKRIV
        +P  VP G  HD +V CKIR +I+
Subjt:  DPAFVPKGKAHDSYVLCKIRKRIV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCAAATCATAATGTACCGTCAAGATGCGGCATCATCGTCTTCGCTCCGACCGACGAGGAACTGTTCGAGCTCTATCTTTATCCGAAGATTCTTTGAGGATTGCAA
TGGTTCATTTACTCTACCCGTGGTTGACCTCTACACCCAAGAACCTTCTCTCCTATGGCAACCATTTGGAGGGATTGATGGTCAAGACTTCTTTTGTTTCACCACACTCA
ACAAGAAGAAATCGCGTATCGTCCGAAAGGTTGCCTCCAACGGCGCTACTTGGAGCGGTGAAAACAAAGCAACCCGAGTATTTTCCGAGGCTATCGGTGCCTTTATTGGT
AGTGTCAAACGCTTTCATTACGAGAATCCTAAACTCAAAGGTAGCATCGAGGATTGTTCTTGGACCATGTACGAGTACACTCTCGATCCCGCCTTTGTACCGAAAGGGAA
AGCACATGATTCGTATGTACTTTGCAAGATTCGAAAAAGAATTGTGAAAACAGTGAGGAAAGGGGTTCCAACATTTGTACAACCATTGGCTTCTTGGCCGCCTACAACAT
CAGTTCCAGCACCAACACAAACATTGGCTTCTTCTCGGCCTACAACATCAGTTCCAGCACCAACACAAACATTGGCTTCTTCTCGGCCTACAACATCAGTTCCAGCACCA
ACACAAACATTGGCTTCTTCTCGGCCTACGACATCGATGGAAGTATACGAACAGAATCACCCCATTCCAGCCGAGATGGAGAATTACGACCCAAATATGACATTTACTGA
GGATGAAATTAGACAACTTCTAGTTCATATGGATTTGAAACCGGTTGTGCAGGAGAATCATGTACCACCATCCAATTTGAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATCAAATCATAATGTACCGTCAAGATGCGGCATCATCGTCTTCGCTCCGACCGACGAGGAACTGTTCGAGCTCTATCTTTATCCGAAGATTCTTTGAGGATTGCAA
TGGTTCATTTACTCTACCCGTGGTTGACCTCTACACCCAAGAACCTTCTCTCCTATGGCAACCATTTGGAGGGATTGATGGTCAAGACTTCTTTTGTTTCACCACACTCA
ACAAGAAGAAATCGCGTATCGTCCGAAAGGTTGCCTCCAACGGCGCTACTTGGAGCGGTGAAAACAAAGCAACCCGAGTATTTTCCGAGGCTATCGGTGCCTTTATTGGT
AGTGTCAAACGCTTTCATTACGAGAATCCTAAACTCAAAGGTAGCATCGAGGATTGTTCTTGGACCATGTACGAGTACACTCTCGATCCCGCCTTTGTACCGAAAGGGAA
AGCACATGATTCGTATGTACTTTGCAAGATTCGAAAAAGAATTGTGAAAACAGTGAGGAAAGGGGTTCCAACATTTGTACAACCATTGGCTTCTTGGCCGCCTACAACAT
CAGTTCCAGCACCAACACAAACATTGGCTTCTTCTCGGCCTACAACATCAGTTCCAGCACCAACACAAACATTGGCTTCTTCTCGGCCTACAACATCAGTTCCAGCACCA
ACACAAACATTGGCTTCTTCTCGGCCTACGACATCGATGGAAGTATACGAACAGAATCACCCCATTCCAGCCGAGATGGAGAATTACGACCCAAATATGACATTTACTGA
GGATGAAATTAGACAACTTCTAGTTCATATGGATTTGAAACCGGTTGTGCAGGAGAATCATGTACCACCATCCAATTTGAAGTAA
Protein sequenceShow/hide protein sequence
MDQIIMYRQDAASSSSLRPTRNCSSSIFIRRFFEDCNGSFTLPVVDLYTQEPSLLWQPFGGIDGQDFFCFTTLNKKKSRIVRKVASNGATWSGENKATRVFSEAIGAFIG
SVKRFHYENPKLKGSIEDCSWTMYEYTLDPAFVPKGKAHDSYVLCKIRKRIVKTVRKGVPTFVQPLASWPPTTSVPAPTQTLASSRPTTSVPAPTQTLASSRPTTSVPAP
TQTLASSRPTTSMEVYEQNHPIPAEMENYDPNMTFTEDEIRQLLVHMDLKPVVQENHVPPSNLK