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Sed0007765 (gene) of Chayote v1 genome

Gene IDSed0007765
OrganismSechium edule (Chayote v1)
DescriptionLipoxygenase
Genome locationLG11:3150945..3151166
RNA-Seq ExpressionSed0007765
SyntenySed0007765
Gene Ontology termsGO:0006633 - fatty acid biosynthetic process (biological process)
GO:0031408 - oxylipin biosynthetic process (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0016702 - oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR000907 - Lipoxygenase
IPR013819 - Lipoxygenase, C-terminal
IPR036226 - Lipoxigenase, C-terminal domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF4368418.1 hypothetical protein G4B88_025480 [Cannabis sativa]4.6e-1365.62Show/hide
Query:  DGEVLDAFYRFKRELNKIEVNIKRRNENHNLKNRVGAVKIPYTLLHPTSTKGITCKGIPNSISI
        +G  L AF RF ++L +IE NI RRN + NLKNRVG VK PYTLLHPTS KG+T  GIPNS+SI
Subjt:  DGEVLDAFYRFKRELNKIEVNIKRRNENHNLKNRVGAVKIPYTLLHPTSTKGITCKGIPNSISI

PRQ42206.1 putative linoleate 9S-lipoxygenase [Rosa chinensis]5.5e-1464.29Show/hide
Query:  NLEQIFDGEVLDAFYRFKRELNKIEVNIKRRNENHNLKNRVGAVKIPYTLLHPTSTKGITCKGIPNSISI
        +LE   D EVL+AF RF ++L +IE  I+ RN+N+NLKNRVG VK+PYTLL+PTS +G+T KGIPNSISI
Subjt:  NLEQIFDGEVLDAFYRFKRELNKIEVNIKRRNENHNLKNRVGAVKIPYTLLHPTSTKGITCKGIPNSISI

XP_024189367.2 probable linoleate 9S-lipoxygenase 5 [Rosa chinensis]5.5e-1464.29Show/hide
Query:  NLEQIFDGEVLDAFYRFKRELNKIEVNIKRRNENHNLKNRVGAVKIPYTLLHPTSTKGITCKGIPNSISI
        +LE   D EVL+AF RF ++L +IE  I+ RN+N+NLKNRVG VK+PYTLL+PTS +G+T KGIPNSISI
Subjt:  NLEQIFDGEVLDAFYRFKRELNKIEVNIKRRNENHNLKNRVGAVKIPYTLLHPTSTKGITCKGIPNSISI

XP_030506244.1 probable linoleate 9S-lipoxygenase 5 isoform X1 [Cannabis sativa]6.0e-1364.06Show/hide
Query:  DGEVLDAFYRFKRELNKIEVNIKRRNENHNLKNRVGAVKIPYTLLHPTSTKGITCKGIPNSISI
        +G  L AF RF ++L +IE NI RRN + NLKNRVG +K PYTLLHPTS KG+T  GIPNS+SI
Subjt:  DGEVLDAFYRFKRELNKIEVNIKRRNENHNLKNRVGAVKIPYTLLHPTSTKGITCKGIPNSISI

XP_030506245.1 probable linoleate 9S-lipoxygenase 5 isoform X2 [Cannabis sativa]6.0e-1364.06Show/hide
Query:  DGEVLDAFYRFKRELNKIEVNIKRRNENHNLKNRVGAVKIPYTLLHPTSTKGITCKGIPNSISI
        +G  L AF RF ++L +IE NI RRN + NLKNRVG +K PYTLLHPTS KG+T  GIPNS+SI
Subjt:  DGEVLDAFYRFKRELNKIEVNIKRRNENHNLKNRVGAVKIPYTLLHPTSTKGITCKGIPNSISI

TrEMBL top hitse value%identityAlignment
A0A2P6R6Y4 Lipoxygenase2.6e-1464.29Show/hide
Query:  NLEQIFDGEVLDAFYRFKRELNKIEVNIKRRNENHNLKNRVGAVKIPYTLLHPTSTKGITCKGIPNSISI
        +LE   D EVL+AF RF ++L +IE  I+ RN+N+NLKNRVG VK+PYTLL+PTS +G+T KGIPNSISI
Subjt:  NLEQIFDGEVLDAFYRFKRELNKIEVNIKRRNENHNLKNRVGAVKIPYTLLHPTSTKGITCKGIPNSISI

A0A7J6E8V3 Lipoxygenase2.9e-1364.06Show/hide
Query:  DGEVLDAFYRFKRELNKIEVNIKRRNENHNLKNRVGAVKIPYTLLHPTSTKGITCKGIPNSISI
        +G  L AF RF ++L +IE NI RRN + NLKNRVG +K PYTLLHPTS KG+T  GIPNS+SI
Subjt:  DGEVLDAFYRFKRELNKIEVNIKRRNENHNLKNRVGAVKIPYTLLHPTSTKGITCKGIPNSISI

A0A7J6FCS8 Lipoxygenase2.2e-1365.62Show/hide
Query:  DGEVLDAFYRFKRELNKIEVNIKRRNENHNLKNRVGAVKIPYTLLHPTSTKGITCKGIPNSISI
        +G  L AF RF ++L +IE NI RRN + NLKNRVG VK PYTLLHPTS KG+T  GIPNS+SI
Subjt:  DGEVLDAFYRFKRELNKIEVNIKRRNENHNLKNRVGAVKIPYTLLHPTSTKGITCKGIPNSISI

A0A7J6FIJ4 Lipoxygenase2.9e-1364.06Show/hide
Query:  DGEVLDAFYRFKRELNKIEVNIKRRNENHNLKNRVGAVKIPYTLLHPTSTKGITCKGIPNSISI
        +G  L AF RF ++L +IE NI RRN + NLKNRVG +K PYTLLHPTS KG+T  GIPNS+SI
Subjt:  DGEVLDAFYRFKRELNKIEVNIKRRNENHNLKNRVGAVKIPYTLLHPTSTKGITCKGIPNSISI

A0A803PSW5 Uncharacterized protein2.9e-1364.06Show/hide
Query:  DGEVLDAFYRFKRELNKIEVNIKRRNENHNLKNRVGAVKIPYTLLHPTSTKGITCKGIPNSISI
        +G  L AF RF ++L +IE NI RRN + NLKNRVG +K PYTLLHPTS KG+T  GIPNS+SI
Subjt:  DGEVLDAFYRFKRELNKIEVNIKRRNENHNLKNRVGAVKIPYTLLHPTSTKGITCKGIPNSISI

SwissProt top hitse value%identityAlignment
O24371 Linoleate 13S-lipoxygenase 3-1, chloroplastic1.7e-1353.12Show/hide
Query:  DGEVLDAFYRFKRELNKIEVNIKRRNENHNLKNRVGAVKIPYTLLHPTSTKGITCKGIPNSISI
        D E+++AFY+F  E+ +IE  I  RN N  LKNR GA  +PY LL P+S  G+TC+G+PNS+SI
Subjt:  DGEVLDAFYRFKRELNKIEVNIKRRNENHNLKNRVGAVKIPYTLLHPTSTKGITCKGIPNSISI

P09439 Seed linoleate 9S-lipoxygenase-21.8e-1253.12Show/hide
Query:  DGEVLDAFYRFKRELNKIEVNIKRRNENHNLKNRVGAVKIPYTLLHPTSTKGITCKGIPNSISI
        D + L AF +F  +L +IE  + R+N + +L NR+G V++PYTLLHP S +G+TC+GIPNSISI
Subjt:  DGEVLDAFYRFKRELNKIEVNIKRRNENHNLKNRVGAVKIPYTLLHPTSTKGITCKGIPNSISI

P38414 Linoleate 9S-lipoxygenase1.8e-1255.93Show/hide
Query:  DAFYRFKRELNKIEVNIKRRNENHNLKNRVGAVKIPYTLLHPTSTKGITCKGIPNSISI
        +AF RF ++L +IE  + +RN + +L+NR G VK+PYTLL+P+S +G+TC+GIPNSISI
Subjt:  DAFYRFKRELNKIEVNIKRRNENHNLKNRVGAVKIPYTLLHPTSTKGITCKGIPNSISI

Q9FNX8 Lipoxygenase 4, chloroplastic3.1e-1248.44Show/hide
Query:  DGEVLDAFYRFKRELNKIEVNIKRRNENHNLKNRVGAVKIPYTLLHPTSTKGITCKGIPNSISI
        D E++DAFY F  E+ +IE  I +RN + + +NR GA  +PY L+ P+S  G+TC+G+PNS+SI
Subjt:  DGEVLDAFYRFKRELNKIEVNIKRRNENHNLKNRVGAVKIPYTLLHPTSTKGITCKGIPNSISI

R9WTS6 Lipoxygenase 1, chloroplastic6.3e-1353.12Show/hide
Query:  DGEVLDAFYRFKRELNKIEVNIKRRNENHNLKNRVGAVKIPYTLLHPTSTKGITCKGIPNSISI
        D E+++AFY F  E+ +IE  I++RN + +LKNR GA  +PY LL P+S  G TC+G+PNSISI
Subjt:  DGEVLDAFYRFKRELNKIEVNIKRRNENHNLKNRVGAVKIPYTLLHPTSTKGITCKGIPNSISI

Arabidopsis top hitse value%identityAlignment
AT1G17420.1 lipoxygenase 34.9e-1348.44Show/hide
Query:  DGEVLDAFYRFKRELNKIEVNIKRRNENHNLKNRVGAVKIPYTLLHPTSTKGITCKGIPNSISI
        D E+++AFY F  E+ +IE  I++RN + + +NR GA  +PY LL P+S  G+TC+G+PNS+SI
Subjt:  DGEVLDAFYRFKRELNKIEVNIKRRNENHNLKNRVGAVKIPYTLLHPTSTKGITCKGIPNSISI

AT1G55020.1 lipoxygenase 12.9e-1354.84Show/hide
Query:  EVLDAFYRFKRELNKIEVNIKRRNENHNLKNRVGAVKIPYTLLHPTSTKGITCKGIPNSISI
        E L+AF +F  ++ +IE NI  RN++  LKNR G VK+PYTLL P+S  G+T +GIPNS+SI
Subjt:  EVLDAFYRFKRELNKIEVNIKRRNENHNLKNRVGAVKIPYTLLHPTSTKGITCKGIPNSISI

AT1G67560.1 PLAT/LH2 domain-containing lipoxygenase family protein2.7e-1154.69Show/hide
Query:  DGEVLDAFYRFKRELNKIEVNIKRRNENHNLKNRVGAVKIPYTLLHPTSTKGITCKGIPNSISI
        D +V+  F +F  EL KIE  I  RN++  LKNR GA   PY LL PTS  G+T +GIPNSISI
Subjt:  DGEVLDAFYRFKRELNKIEVNIKRRNENHNLKNRVGAVKIPYTLLHPTSTKGITCKGIPNSISI

AT1G72520.1 PLAT/LH2 domain-containing lipoxygenase family protein2.2e-1348.44Show/hide
Query:  DGEVLDAFYRFKRELNKIEVNIKRRNENHNLKNRVGAVKIPYTLLHPTSTKGITCKGIPNSISI
        D E++DAFY F  E+ +IE  I +RN + + +NR GA  +PY L+ P+S  G+TC+G+PNS+SI
Subjt:  DGEVLDAFYRFKRELNKIEVNIKRRNENHNLKNRVGAVKIPYTLLHPTSTKGITCKGIPNSISI

AT3G22400.1 PLAT/LH2 domain-containing lipoxygenase family protein2.9e-1357.97Show/hide
Query:  DGEVLDAFYRFKRELNKIEVNIKRRNENHNLKNRVGAVKIPYTLLHPTSTK-----GITCKGIPNSISI
        D E L+AF RF +EL  IE NI RRN +   KNR G V IPYTLL+P +T      GIT KGIPNS+SI
Subjt:  DGEVLDAFYRFKRELNKIEVNIKRRNENHNLKNRVGAVKIPYTLLHPTSTK-----GITCKGIPNSISI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACTGCAATCTGGAGCAAATCTTTGATGGGGAAGTTTTAGATGCATTTTATAGATTCAAGAGAGAATTAAATAAAATTGAAGTCAATATTAAGAGAAGAAACGAAAA
TCACAATTTGAAAAATCGAGTTGGAGCTGTGAAGATACCATACACTTTGCTACATCCCACCAGCACAAAAGGCATTACATGTAAAGGAATTCCCAATAGCATTTCTATTT
GA
mRNA sequenceShow/hide mRNA sequence
ATGGACTGCAATCTGGAGCAAATCTTTGATGGGGAAGTTTTAGATGCATTTTATAGATTCAAGAGAGAATTAAATAAAATTGAAGTCAATATTAAGAGAAGAAACGAAAA
TCACAATTTGAAAAATCGAGTTGGAGCTGTGAAGATACCATACACTTTGCTACATCCCACCAGCACAAAAGGCATTACATGTAAAGGAATTCCCAATAGCATTTCTATTT
GA
Protein sequenceShow/hide protein sequence
MDCNLEQIFDGEVLDAFYRFKRELNKIEVNIKRRNENHNLKNRVGAVKIPYTLLHPTSTKGITCKGIPNSISI