CuGenDBv2

Gene ID	Sed0007841
Organism	Sechium edule (Chayote v1)
Description	Defensin-like protein
Genome location	LG10:1852750..1856250
RNA-Seq Expression	Sed0007841
Synteny	Sed0007841
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004134712.1 uncharacterized protein LOC101206260 [Cucumis sativus]

1.1e-52

80.33

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Query:  KWVRFALLIWRVFCKKGCDADGDNWEECLEECTEICYKDPVFKDQQWSAFIDRSPGSASYSEECFHACASGCGFKFDVDSGVADKLQANRPAKPVPVVSK
        K+     + WRVFCKKGCDADG+ W+ECLEECTEICYKDPVFKD QWSA+IDRSPGSASYSEECFHAC SGCGFKF+V+   ADK+Q NRPAKP PVVSK
Subjt:  KWVRFALLIWRVFCKKGCDADGDNWEECLEECTEICYKDPVFKDQQWSAFIDRSPGSASYSEECFHACASGCGFKFDVDSGVADKLQANRPAKPVPVVSK

Query:  PAPRPPITESIAKNEDVPSTSA
        P+PRPPITESIAKNED+PSTSA
Subjt:  PAPRPPITESIAKNEDVPSTSA

XP_008439869.1 PREDICTED: uncharacterized protein LOC103484528 isoform X1 [Cucumis melo]

4.2e-52

79.51

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Query:  KWVRFALLIWRVFCKKGCDADGDNWEECLEECTEICYKDPVFKDQQWSAFIDRSPGSASYSEECFHACASGCGFKFDVDSGVADKLQANRPAKPVPVVSK
        K+     + WRVFCKKGCDADG+ W+ECLEECTEICYKDPVFK+ QWSA+IDRSPGSASYSEECFHAC SGCGFKF+V+   ADK+Q NRPAKP PVVSK
Subjt:  KWVRFALLIWRVFCKKGCDADGDNWEECLEECTEICYKDPVFKDQQWSAFIDRSPGSASYSEECFHACASGCGFKFDVDSGVADKLQANRPAKPVPVVSK

Query:  PAPRPPITESIAKNEDVPSTSA
        P+PRPPITESIAKNED+PSTSA
Subjt:  PAPRPPITESIAKNEDVPSTSA

XP_022142369.1 uncharacterized protein LOC111012509 [Momordica charantia]

2.3e-50

77.05

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Query:  KWVRFALLIWRVFCKKGCDADGDNWEECLEECTEICYKDPVFKDQQWSAFIDRSPGSASYSEECFHACASGCGFKFDVDSGVADKLQANRPAKPVPVVSK
        K+     + WRVFCKKGCDADG++WEECLEECTEICYKDPV KD QWSA+IDRSPG+ASYSEECFHAC SGCGFKF+VDS  ADK+Q NRP KP PVV  
Subjt:  KWVRFALLIWRVFCKKGCDADGDNWEECLEECTEICYKDPVFKDQQWSAFIDRSPGSASYSEECFHACASGCGFKFDVDSGVADKLQANRPAKPVPVVSK

Query:  PAPRPPITESIAKNEDVPSTSA
        P+PRPPITES  KNED+PSTSA
Subjt:  PAPRPPITESIAKNEDVPSTSA

XP_022926758.1 uncharacterized protein LOC111433786 [Cucurbita moschata]

9.5e-57

85.25

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Query:  KWVRFALLIWRVFCKKGCDADGDNWEECLEECTEICYKDPVFKDQQWSAFIDRSPGSASYSEECFHACASGCGFKFDVDSGVADKLQANRPAKPVPVVSK
        K+     + WRVFCKKGCDADGD WEECLEECTEICYKDPVFKD QWSA+IDRSPGSASYSEECFHACASGCGFKFDVDSG ADK+QANRP KPVP+VSK
Subjt:  KWVRFALLIWRVFCKKGCDADGDNWEECLEECTEICYKDPVFKDQQWSAFIDRSPGSASYSEECFHACASGCGFKFDVDSGVADKLQANRPAKPVPVVSK

Query:  PAPRPPITESIAKNEDVPSTSA
        PAPRPPITE +AKNED+PSTSA
Subjt:  PAPRPPITESIAKNEDVPSTSA

XP_038883449.1 uncharacterized protein LOC120074406 isoform X1 [Benincasa hispida]

2.2e-53

81.97

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Query:  KWVRFALLIWRVFCKKGCDADGDNWEECLEECTEICYKDPVFKDQQWSAFIDRSPGSASYSEECFHACASGCGFKFDVDSGVADKLQANRPAKPVPVVSK
        K+     + WRVFCKKGCDADG+ WEECLEECTEICYKDPVFKD QWSA+IDRSPGSASYSEECFHAC SGCGFKFDV+   ADK+Q NRPAKPVPVVSK
Subjt:  KWVRFALLIWRVFCKKGCDADGDNWEECLEECTEICYKDPVFKDQQWSAFIDRSPGSASYSEECFHACASGCGFKFDVDSGVADKLQANRPAKPVPVVSK

Query:  PAPRPPITESIAKNEDVPSTSA
        P+PRPPI ESIAKNED+PSTSA
Subjt:  PAPRPPITESIAKNEDVPSTSA

TrEMBL top hits

e value

%identity

Alignment

A0A151T7D9 Uncharacterized protein

1.5e-39

65.57

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Query:  KWVRFALLIWRVFCKKGCDADGDNWEECLEECTEICYKDPVFKDQQWSAFIDRSPGSASYSEECFHACASGCGFKFDVDSGVADKLQANRPAKPVPVVSK
        K+     + WRVFCKKGC++DG+ WEECLEEC +ICYKDPV KDQQWSA+IDRSPG+ASYSEECF AC SGCG+KFDV     DK+  NRP KP P V K
Subjt:  KWVRFALLIWRVFCKKGCDADGDNWEECLEECTEICYKDPVFKDQQWSAFIDRSPGSASYSEECFHACASGCGFKFDVDSGVADKLQANRPAKPVPVVSK

Query:  PAPRPPITESIAKNEDVPSTSA
        P P+P   ESI   ED+P TSA
Subjt:  PAPRPPITESIAKNEDVPSTSA

A0A1S3AZC9 uncharacterized protein LOC103484528 isoform X1

2.0e-52

79.51

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Query:  KWVRFALLIWRVFCKKGCDADGDNWEECLEECTEICYKDPVFKDQQWSAFIDRSPGSASYSEECFHACASGCGFKFDVDSGVADKLQANRPAKPVPVVSK
        K+     + WRVFCKKGCDADG+ W+ECLEECTEICYKDPVFK+ QWSA+IDRSPGSASYSEECFHAC SGCGFKF+V+   ADK+Q NRPAKP PVVSK
Subjt:  KWVRFALLIWRVFCKKGCDADGDNWEECLEECTEICYKDPVFKDQQWSAFIDRSPGSASYSEECFHACASGCGFKFDVDSGVADKLQANRPAKPVPVVSK

Query:  PAPRPPITESIAKNEDVPSTSA
        P+PRPPITESIAKNED+PSTSA
Subjt:  PAPRPPITESIAKNEDVPSTSA

A0A6J1CKR8 uncharacterized protein LOC111012509

1.1e-50

77.05

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Query:  KWVRFALLIWRVFCKKGCDADGDNWEECLEECTEICYKDPVFKDQQWSAFIDRSPGSASYSEECFHACASGCGFKFDVDSGVADKLQANRPAKPVPVVSK
        K+     + WRVFCKKGCDADG++WEECLEECTEICYKDPV KD QWSA+IDRSPG+ASYSEECFHAC SGCGFKF+VDS  ADK+Q NRP KP PVV  
Subjt:  KWVRFALLIWRVFCKKGCDADGDNWEECLEECTEICYKDPVFKDQQWSAFIDRSPGSASYSEECFHACASGCGFKFDVDSGVADKLQANRPAKPVPVVSK

Query:  PAPRPPITESIAKNEDVPSTSA
        P+PRPPITES  KNED+PSTSA
Subjt:  PAPRPPITESIAKNEDVPSTSA

A0A6J1EJ45 uncharacterized protein LOC111433786

4.6e-57

85.25

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Query:  KWVRFALLIWRVFCKKGCDADGDNWEECLEECTEICYKDPVFKDQQWSAFIDRSPGSASYSEECFHACASGCGFKFDVDSGVADKLQANRPAKPVPVVSK
        K+     + WRVFCKKGCDADGD WEECLEECTEICYKDPVFKD QWSA+IDRSPGSASYSEECFHACASGCGFKFDVDSG ADK+QANRP KPVP+VSK
Subjt:  KWVRFALLIWRVFCKKGCDADGDNWEECLEECTEICYKDPVFKDQQWSAFIDRSPGSASYSEECFHACASGCGFKFDVDSGVADKLQANRPAKPVPVVSK

Query:  PAPRPPITESIAKNEDVPSTSA
        PAPRPPITE +AKNED+PSTSA
Subjt:  PAPRPPITESIAKNEDVPSTSA

A0A6J1KVS0 uncharacterized protein LOC111496877

4.6e-57

85.25

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Query:  KWVRFALLIWRVFCKKGCDADGDNWEECLEECTEICYKDPVFKDQQWSAFIDRSPGSASYSEECFHACASGCGFKFDVDSGVADKLQANRPAKPVPVVSK
        K+     + WRVFCKKGCDADGD WEECLEECTEICYKDPVFKD QWSA+IDRSPGSASYSEECFHACASGCGFKFDVDSG ADK+QANRP KPVP+VSK
Subjt:  KWVRFALLIWRVFCKKGCDADGDNWEECLEECTEICYKDPVFKDQQWSAFIDRSPGSASYSEECFHACASGCGFKFDVDSGVADKLQANRPAKPVPVVSK

Query:  PAPRPPITESIAKNEDVPSTSA
        PAPRPPITE +AKNED+PSTSA
Subjt:  PAPRPPITESIAKNEDVPSTSA

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G21720.1 unknown protein

1.8e-37

57.14

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Query:  KWVRFALLIWRVFCKKGCDADGDNWEECLEECTEICYKDPVFKDQQWSAFIDRSPGSASYSEECFHACASGCGFKFDVDSGVADKLQANRPAKPVPVVSK
        K+  F  L WRVFCKKGCDAD D+WE+C+ +C+EICYKDPV KD+ W+A IDRSPG A YSEECFHAC +GCG+KFDV++ + +K++  RP  P P   K
Subjt:  KWVRFALLIWRVFCKKGCDADGDNWEECLEECTEICYKDPVFKDQQWSAFIDRSPGSASYSEECFHACASGCGFKFDVDSGVADKLQANRPAKPVPVVSK

Query:  PAPRPPITES----IAKNEDVPSTSA
        P P PP   S        EDV +TSA
Subjt:  PAPRPPITES----IAKNEDVPSTSA

AT4G21720.2 unknown protein

1.5e-23

55.21

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Query:  ECTEICYKDPVFKDQQWSAFIDRSPGSASYSEECFHACASGCGFKFDVDSGVADKLQANRPAKPVPVVSKPAPRPPITES----IAKNEDVPSTSA
        +C+EICYKDPV KD+ W+A IDRSPG A YSEECFHAC +GCG+KFDV++ + +K++  RP  P P   KP P PP   S        EDV +TSA
Subjt:  ECTEICYKDPVFKDQQWSAFIDRSPGSASYSEECFHACASGCGFKFDVDSGVADKLQANRPAKPVPVVSKPAPRPPITES----IAKNEDVPSTSA

Sequences

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CDS sequence

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ATGTTTTGTCAAAAAAGAAAAAAAAAAAGAATCCCCAAACCCAAAGGATGTACACCCGTAGCCGTAGGTCCAGCCTTTGACAATGCTCATCTGCATATTCCATCTCTTTT
CGGCTCCTTCTTAGCATTTCAAACAGAGAAAAGAAGAAATCCATCGCCAAAGAGAGCGAAAGATTTGAAGGAATTTTGTGTATTATTGTTATATGATGATACCGCAAAAA
TGGGTGCCTCCTTGTGGAAACGAATGCACCCACAAATACGCAGCCCTCACCAAGATTCCTTGTATGTAACTGCTATATCTTTTACCACCCATGTTCTTAAATGGGTGCGT
TTTGCTTTGTTGATTTGGCGGGTTTTTTGCAAAAAGGGGTGTGATGCTGATGGAGATAACTGGGAGGAATGCTTGGAGGAATGCACTGAGATATGCTATAAGGATCCTGT
ATTCAAGGACCAGCAGTGGAGTGCTTTCATTGACCGATCTCCTGGGTCGGCCAGTTACTCAGAGGAATGTTTTCATGCCTGTGCATCGGGTTGCGGATTTAAGTTTGATG
TCGACTCGGGGGTAGCTGACAAACTACAAGCAAACAGGCCTGCAAAGCCAGTACCCGTTGTTTCTAAACCAGCCCCAAGACCTCCAATCACTGAATCCATCGCCAAAAAC
GAAGATGTACCAAGCACTTCTGCATAG

mRNA sequence

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Protein sequence

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MFCQKRKKKRIPKPKGCTPVAVGPAFDNAHLHIPSLFGSFLAFQTEKRRNPSPKRAKDLKEFCVLLLYDDTAKMGASLWKRMHPQIRSPHQDSLYVTAISFTTHVLKWVR
FALLIWRVFCKKGCDADGDNWEECLEECTEICYKDPVFKDQQWSAFIDRSPGSASYSEECFHACASGCGFKFDVDSGVADKLQANRPAKPVPVVSKPAPRPPITESIAKN
EDVPSTSA

Sed0007841 (gene) of Chayote v1 genome