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Sed0007854 (gene) of Chayote v1 genome

Gene IDSed0007854
OrganismSechium edule (Chayote v1)
DescriptionCYSTM domain-containing protein
Genome locationLG12:7472505..7473134
RNA-Seq ExpressionSed0007854
SyntenySed0007854
Gene Ontology termsGO:0005886 - plasma membrane (cellular component)
InterPro domainsIPR028144 - Cysteine-rich transmembrane CYSTM domain
IPR044850 - Cysteine-rich and transmembrane domain-containing protein WIH1/2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EEF30889.1 conserved hypothetical protein [Ricinus communis]5.8e-0956.14Show/hide
Query:  MPITEAKQDHHPPGHPTEDVGTGKKRFWDTTKKRGDGSFIDGCLYVLCCCCLCEACF
        MP +E +++  PPG+PT D  T KK+    TKK+GD  FI+GCL+ LCCC LCEACF
Subjt:  MPITEAKQDHHPPGHPTEDVGTGKKRFWDTTKKRGDGSFIDGCLYVLCCCCLCEACF

ESR34507.1 hypothetical protein CICLE_v10006402mg [Citrus clementina]1.4e-0753.57Show/hide
Query:  TEAKQDHHPPGHPTED--VGTGKKRFWDTTKKRGDGSFIDGCLYVLCCCCLCEACF
        +E + +  P G+PTE+   G GKK+    TKK+GD  FI+GCL+ LCCC LCEACF
Subjt:  TEAKQDHHPPGHPTED--VGTGKKRFWDTTKKRGDGSFIDGCLYVLCCCCLCEACF

GFP80864.1 hypothetical protein PHJA_000229700 [Phtheirospermum japonicum]1.1e-0760.42Show/hide
Query:  PPGHPTEDVGTGKK--RFWDTTKKRGDGSFIDGCLYVLCCCCLCEACF
        PPG+PTE+  TGKK  + W  TK +GD  FI+GCL+ LCCC LCE CF
Subjt:  PPGHPTEDVGTGKK--RFWDTTKKRGDGSFIDGCLYVLCCCCLCEACF

OAY43280.1 hypothetical protein MANES_08G056600v8 [Manihot esculenta]6.4e-0854.39Show/hide
Query:  MPITEAKQDHHPPGHPTEDVGTGKKRFWDTTKKRGDGSFIDGCLYVLCCCCLCEACF
        MP +E ++++   G+PTE   TGKK F + +KK+GD  FI+GCL+ LCCC LCEACF
Subjt:  MPITEAKQDHHPPGHPTEDVGTGKKRFWDTTKKRGDGSFIDGCLYVLCCCCLCEACF

XP_007028562.2 PREDICTED: cysteine-rich and transmembrane domain-containing protein A [Theobroma cacao]8.3e-0852.63Show/hide
Query:  MPITEAKQDHHPPGHPTEDVGTGKKRFWDTTKKRGDGSFIDGCLYVLCCCCLCEACF
        MP ++A+++  P G+PT D+   KK F   TKK+GD  FI+GCL+ LCCC LCE CF
Subjt:  MPITEAKQDHHPPGHPTEDVGTGKKRFWDTTKKRGDGSFIDGCLYVLCCCCLCEACF

TrEMBL top hitse value%identityAlignment
A0A2C9VDQ1 CYSTM domain-containing protein3.1e-0854.39Show/hide
Query:  MPITEAKQDHHPPGHPTEDVGTGKKRFWDTTKKRGDGSFIDGCLYVLCCCCLCEACF
        MP +E ++++   G+PTE   TGKK F + +KK+GD  FI+GCL+ LCCC LCEACF
Subjt:  MPITEAKQDHHPPGHPTEDVGTGKKRFWDTTKKRGDGSFIDGCLYVLCCCCLCEACF

A0A4P1R6P7 CYSTM domain-containing protein5.8e-0753.85Show/hide
Query:  EAKQDHHPPGHPTEDVGTGKKRFWDTTKKRGDGSFIDGCLYVLCCCCLCEAC
        E + +  PPG+PTED  T K++F  +TKK+G+  FI+GCL+ LCCC LCE C
Subjt:  EAKQDHHPPGHPTEDVGTGKKRFWDTTKKRGDGSFIDGCLYVLCCCCLCEAC

A0A6P5YWU3 cysteine-rich and transmembrane domain-containing protein WIH29.0e-0847.37Show/hide
Query:  MPITEAKQDHHPPGHPTEDVGTGKKRFWDTTKKRGDGSFIDGCLYVLCCCCLCEACF
        MP +EA+++  P G+P+ +    +K+ +  TKK+GD  FI+GCL+ LCCC LCE CF
Subjt:  MPITEAKQDHHPPGHPTEDVGTGKKRFWDTTKKRGDGSFIDGCLYVLCCCCLCEACF

B9SZT3 CYSTM domain-containing protein2.8e-0956.14Show/hide
Query:  MPITEAKQDHHPPGHPTEDVGTGKKRFWDTTKKRGDGSFIDGCLYVLCCCCLCEACF
        MP +E +++  PPG+PT D  T KK+    TKK+GD  FI+GCL+ LCCC LCEACF
Subjt:  MPITEAKQDHHPPGHPTEDVGTGKKRFWDTTKKRGDGSFIDGCLYVLCCCCLCEACF

V4S2H5 CYSTM domain-containing protein6.9e-0853.57Show/hide
Query:  TEAKQDHHPPGHPTED--VGTGKKRFWDTTKKRGDGSFIDGCLYVLCCCCLCEACF
        +E + +  P G+PTE+   G GKK+    TKK+GD  FI+GCL+ LCCC LCEACF
Subjt:  TEAKQDHHPPGHPTED--VGTGKKRFWDTTKKRGDGSFIDGCLYVLCCCCLCEACF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G32190.1 unknown protein9.2e-0545.65Show/hide
Query:  PPGHPTEDVGTGKKRFWDTTKKRGDGSFIDGCLYVLCCCCLCEACF
        P G+PT D+        + TK +GDG F+ GCL  +CCCC+ +ACF
Subjt:  PPGHPTEDVGTGKKRFWDTTKKRGDGSFIDGCLYVLCCCCLCEACF

AT2G32210.1 unknown protein1.2e-0445.65Show/hide
Query:  PPGHPTEDVGTGKKRFWDTTKKRGDGSFIDGCLYVLCCCCLCEACF
        P G+PT D         + TK +GDG F+ GCL  +CCCC+ +ACF
Subjt:  PPGHPTEDVGTGKKRFWDTTKKRGDGSFIDGCLYVLCCCCLCEACF

AT5G04080.1 unknown protein7.5e-0746.67Show/hide
Query:  QDHHPP-GHP-----TEDVGTGKK----RFWDTTKKRGDGSFIDGCLYVLCCCCLCEACF
        +D +PP G+P     +E  G  KK    RF++ TK++GD  FI+GCL+ LCCC +CE CF
Subjt:  QDHHPP-GHP-----TEDVGTGKK----RFWDTTKKRGDGSFIDGCLYVLCCCCLCEACF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCCATAACAGAAGCAAAACAAGACCACCACCCACCAGGGCACCCGACCGAGGATGTCGGGACAGGGAAGAAACGGTTCTGGGACACCACAAAGAAACGAGGAGACGG
AAGTTTTATTGATGGATGCCTTTATGTCTTGTGCTGCTGCTGCCTTTGTGAGGCATGCTTCCATTCTGTTAAATGA
mRNA sequenceShow/hide mRNA sequence
GCTTCAAAGATGCCCATAACAGAAGCAAAACAAGACCACCACCCACCAGGGCACCCGACCGAGGATGTCGGGACAGGGAAGAAACGGTTCTGGGACACCACAAAGAAACG
AGGAGACGGAAGTTTTATTGATGGATGCCTTTATGTCTTGTGCTGCTGCTGCCTTTGTGAGGCATGCTTCCATTCTGTTAAATGATTTTCCTGCTTGTTGTAATTACTAA
TTAGTGTTATATATATAAATACCATCAACATGAACAATAACTCATGTATTGTATATATCAACTTTAAATATGAGATGGTCTTCTTCTGGTACTTGCCTTGGATTTTCTTG
TTCTAAGTAATAGATCTGATTCATATTGAATCCATATTCATTTGTCTAAAAAAGAGAATAAATTATTCGACGAGGCCACTACAATGAATAGAAAGAAACCGTAACCGTAC
CTCAATTTTGTATCTCGCGGACATTAAGGGCA
Protein sequenceShow/hide protein sequence
MPITEAKQDHHPPGHPTEDVGTGKKRFWDTTKKRGDGSFIDGCLYVLCCCCLCEACFHSVK