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Sed0007891 (gene) of Chayote v1 genome

Gene IDSed0007891
OrganismSechium edule (Chayote v1)
DescriptionTransmembrane protein, putative
Genome locationLG10:28470301..28470666
RNA-Seq ExpressionSed0007891
SyntenySed0007891
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6598392.1 hypothetical protein SDJN03_08170, partial [Cucurbita argyrosperma subsp. sororia]9.6e-4080Show/hide
Query:  MSLPIDPQSPPAPGMQQPYGGHSGSGSVGPVIGVLVVIIVFAVVAVVVGRLCSGKTIMGYGHFDLETWAETKCSSCIDGRISPPPPPMVNVSAPTATLP-
        MSLPI+ QSPPA GM  PYGGH  SGSVGPVIGVLVVIIVFAVVAVVVGRLCSG +IMGYGHFDLE+WAETKCSSCIDGRIS   PP VNVS P A+LP 
Subjt:  MSLPIDPQSPPAPGMQQPYGGHSGSGSVGPVIGVLVVIIVFAVVAVVVGRLCSGKTIMGYGHFDLETWAETKCSSCIDGRISPPPPPMVNVSAPTATLP-

Query:  ---AVETQQETKQEEPASQNPPPNA
           AV TQQETKQEEPASQNP  +A
Subjt:  ---AVETQQETKQEEPASQNPPPNA
XP_022144319.1 uncharacterized protein LOC111014030 [Momordica charantia]1.7e-4485.25Show/hide
Query:  MSLPIDPQSPPAPGMQQPYGGHSGSGSVGPVIGVLVVIIVFAVVAVVVGRLCSGKTIMGYGHFDLETWAETKCSSCIDGRISPPPPPMVNVSAPT--ATL
        MSLPI+ QSPPAPGMQQPYGGH  +GSVGPVIGVLVVIIVFAVVAVVVGRLCSGKTIMGYGHFDLE+WAETKCSSCIDGRIS PPPP  NVSA T    L
Subjt:  MSLPIDPQSPPAPGMQQPYGGHSGSGSVGPVIGVLVVIIVFAVVAVVVGRLCSGKTIMGYGHFDLETWAETKCSSCIDGRISPPPPPMVNVSAPT--ATL

Query:  P---AVETQQETKQEEPASQNP
        P   AV+TQQETKQEEPASQNP
Subjt:  P---AVETQQETKQEEPASQNP
XP_023002021.1 uncharacterized protein LOC111496028 [Cucurbita maxima]3.5e-4280.33Show/hide
Query:  MSLPIDPQSPPAPGMQQPYGGHSGS-GSVGPVIGVLVVIIVFAVVAVVVGRLCSGKTIMGYGHFDLETWAETKCSSCIDGRISPPPPPMVNVSAPTATLP
        MSLPID QSPPAPGMQQPYGGH+ S GSVGPVIGVLVVIIVFAVVAVVVGRLCSG++IMGYGHFDLE WAE KCSSCIDGRIS  P P VNVS   A+LP
Subjt:  MSLPIDPQSPPAPGMQQPYGGHSGS-GSVGPVIGVLVVIIVFAVVAVVVGRLCSGKTIMGYGHFDLETWAETKCSSCIDGRISPPPPPMVNVSAPTATLP

Query:  AVETQQETKQEEPASQNPPPNA
        A     +T+Q+EPASQNPPPNA
Subjt:  AVETQQETKQEEPASQNPPPNA
XP_031737057.1 uncharacterized protein LOC116402140 [Cucumis sativus]2.8e-3976.19Show/hide
Query:  MSLPIDPQSPPAPGMQQPYGGHSGSGSVGPVIGVLVVIIVFAVVAVVVGRLCSGKTIMGYGHFDLETWAETKCSSCIDGRISPPPPPM-VNVSAPTATLP
        MSLPI+ QSP  PGMQQ Y GH GSGSVGPVIGVL+VIIVFAVVAVVVGRLCSG++IMGYGHFDLE+WAETKCSSCIDGRI+PPPP +  + +A  ++LP
Subjt:  MSLPIDPQSPPAPGMQQPYGGHSGSGSVGPVIGVLVVIIVFAVVAVVVGRLCSGKTIMGYGHFDLETWAETKCSSCIDGRISPPPPPM-VNVSAPTATLP

Query:  ----AVETQQETKQEEPASQNPPPNA
            AV TQQETKQEEPASQNP  NA
Subjt:  ----AVETQQETKQEEPASQNPPPNA
XP_038885752.1 uncharacterized protein LOC120076044 [Benincasa hispida]2.5e-4078.74Show/hide
Query:  MSLPIDPQSPPAPGMQQPYGGHSGSGSVGPVIGVLVVIIVFAVVAVVVGRLCSGKTIMGYGHFDLETWAETKCSSCIDGRISPPPPPMVNVSAPTATLP-
        MSLPI+ QSPPA  MQQ YGGH GSGSVGPVIGVLVVIIVFAVVAVVVGRLCSG++IMGYGHFDLE+WAETKCSSCIDGRIS PPPP V+  A  A+LP 
Subjt:  MSLPIDPQSPPAPGMQQPYGGHSGSGSVGPVIGVLVVIIVFAVVAVVVGRLCSGKTIMGYGHFDLETWAETKCSSCIDGRISPPPPPMVNVSAPTATLP-

Query:  ---AVETQQETK--QEEPASQNPPPNA
           A   QQETK  QEEPASQNPP NA
Subjt:  ---AVETQQETK--QEEPASQNPPPNA
TrEMBL top hitse value%identityAlignment
A0A0A0LP67 Uncharacterized protein1.4e-3976.19Show/hide
Query:  MSLPIDPQSPPAPGMQQPYGGHSGSGSVGPVIGVLVVIIVFAVVAVVVGRLCSGKTIMGYGHFDLETWAETKCSSCIDGRISPPPPPM-VNVSAPTATLP
        MSLPI+ QSP  PGMQQ Y GH GSGSVGPVIGVL+VIIVFAVVAVVVGRLCSG++IMGYGHFDLE+WAETKCSSCIDGRI+PPPP +  + +A  ++LP
Subjt:  MSLPIDPQSPPAPGMQQPYGGHSGSGSVGPVIGVLVVIIVFAVVAVVVGRLCSGKTIMGYGHFDLETWAETKCSSCIDGRISPPPPPM-VNVSAPTATLP

Query:  ----AVETQQETKQEEPASQNPPPNA
            AV TQQETKQEEPASQNP  NA
Subjt:  ----AVETQQETKQEEPASQNPPPNA
A0A5A7V9H6 Putative transmembrane protein2.3e-3976Show/hide
Query:  MSLPIDPQSPPAPGMQQPYGGHSGSGSVGPVIGVLVVIIVFAVVAVVVGRLCSGKTIMGYGHFDLETWAETKCSSCIDGRISPPPPPMVNVSAPTATLP-
        MS PI+ QSP  PG+QQ Y GH GSGSVGPVIGVLVVIIVFAVVAVVVGRLCSG++IMGYGHFDLE+WAETKCSSCIDGRI+PPPP +   +A  ++LP 
Subjt:  MSLPIDPQSPPAPGMQQPYGGHSGSGSVGPVIGVLVVIIVFAVVAVVVGRLCSGKTIMGYGHFDLETWAETKCSSCIDGRISPPPPPMVNVSAPTATLP-

Query:  ---AVETQQETKQEEPASQNPPPNA
           AV TQQETKQEEPASQNP  NA
Subjt:  ---AVETQQETKQEEPASQNPPPNA
A0A5C7H7B8 Uncharacterized protein5.0e-2658.2Show/hide
Query:  MSLPIDPQSPPAPGMQQPYGGHSGSGSVGPVIGVLVVIIVFAVVAVVVGRLCSGKTIMGYGHFDLETWAETKCSSCIDGRISPPPPPMVNVSAPTATLP-
        MS+P+D Q PP    QQ Y  HS  GSVGPVI VLVVII+  ++A ++GRLCSGKTIMGYG +D+E+WAE+KCS+CIDGRI+ PP P ++VS+ T+ LP 
Subjt:  MSLPIDPQSPPAPGMQQPYGGHSGSGSVGPVIGVLVVIIVFAVVAVVVGRLCSGKTIMGYGHFDLETWAETKCSSCIDGRISPPPPPMVNVSAPTATLP-

Query:  --AVETQQETKQEEPASQNPPP
          + ET QETK EE     P P
Subjt:  --AVETQQETKQEEPASQNPPP
A0A6J1CRZ5 uncharacterized protein LOC1110140308.2e-4585.25Show/hide
Query:  MSLPIDPQSPPAPGMQQPYGGHSGSGSVGPVIGVLVVIIVFAVVAVVVGRLCSGKTIMGYGHFDLETWAETKCSSCIDGRISPPPPPMVNVSAPT--ATL
        MSLPI+ QSPPAPGMQQPYGGH  +GSVGPVIGVLVVIIVFAVVAVVVGRLCSGKTIMGYGHFDLE+WAETKCSSCIDGRIS PPPP  NVSA T    L
Subjt:  MSLPIDPQSPPAPGMQQPYGGHSGSGSVGPVIGVLVVIIVFAVVAVVVGRLCSGKTIMGYGHFDLETWAETKCSSCIDGRISPPPPPMVNVSAPT--ATL

Query:  P---AVETQQETKQEEPASQNP
        P   AV+TQQETKQEEPASQNP
Subjt:  P---AVETQQETKQEEPASQNP
A0A6J1KK79 uncharacterized protein LOC1114960281.7e-4280.33Show/hide
Query:  MSLPIDPQSPPAPGMQQPYGGHSGS-GSVGPVIGVLVVIIVFAVVAVVVGRLCSGKTIMGYGHFDLETWAETKCSSCIDGRISPPPPPMVNVSAPTATLP
        MSLPID QSPPAPGMQQPYGGH+ S GSVGPVIGVLVVIIVFAVVAVVVGRLCSG++IMGYGHFDLE WAE KCSSCIDGRIS  P P VNVS   A+LP
Subjt:  MSLPIDPQSPPAPGMQQPYGGHSGS-GSVGPVIGVLVVIIVFAVVAVVVGRLCSGKTIMGYGHFDLETWAETKCSSCIDGRISPPPPPMVNVSAPTATLP

Query:  AVETQQETKQEEPASQNPPPNA
        A     +T+Q+EPASQNPPPNA
Subjt:  AVETQQETKQEEPASQNPPPNA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G26520.1 unknown protein4.9e-1849.47Show/hide
Query:  SLPIDPQSPPAPGMQQPYGGHS--GSGSVGPVIGVLVVIIVFAVVAVVVGRLCSGKTIMGYGHFDLETWAETKCSSCIDGRI-------SPPPPP
        S+P+  Q PPA  + Q     S  G+ ++GP I V +V+ V  V+A V+GRLCSGKTI+GYG +D+E WAE++C SCIDG I       SP PPP
Subjt:  SLPIDPQSPPAPGMQQPYGGHS--GSGSVGPVIGVLVVIIVFAVVAVVVGRLCSGKTIMGYGHFDLETWAETKCSSCIDGRI-------SPPPPP
AT3G57500.1 unknown protein3.5e-0839.25Show/hide
Query:  IDPQSPPAPGMQQPYGGHSGSGSVGPVIGVLVVIIVFAVVAVVVGRLCSGKTIMGYGHFDLETWAETKCSSCIDGRI-------SPPPPPMVNVSAPTAT
        IDP     P   QP   +S   S+  ++ VL VI + +V+A V  RLC G+ +   G  D+E W E KC SCID  I       SPPPPP    +A   +
Subjt:  IDPQSPPAPGMQQPYGGHSGSGSVGPVIGVLVVIIVFAVVAVVVGRLCSGKTIMGYGHFDLETWAETKCSSCIDGRI-------SPPPPPMVNVSAPTAT

Query:  LPAVETQ
         PA E Q
Subjt:  LPAVETQ

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCACTCCCAATTGATCCACAATCTCCGCCGGCGCCGGGAATGCAGCAACCTTACGGCGGTCATTCGGGCAGCGGCTCCGTCGGTCCGGTCATCGGAGTGCTCGTCGT
CATCATTGTGTTCGCGGTGGTCGCCGTCGTGGTGGGGCGGCTGTGCTCGGGGAAGACCATAATGGGCTACGGCCATTTCGACTTGGAGACTTGGGCGGAGACCAAATGCT
CGTCTTGCATCGACGGAAGGATCAGCCCGCCACCGCCGCCGATGGTCAATGTCTCCGCCCCCACCGCCACTCTTCCGGCGGTCGAAACCCAGCAAGAGACTAAGCAAGAA
GAACCAGCTTCTCAAAATCCACCTCCCAACGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCACTCCCAATTGATCCACAATCTCCGCCGGCGCCGGGAATGCAGCAACCTTACGGCGGTCATTCGGGCAGCGGCTCCGTCGGTCCGGTCATCGGAGTGCTCGTCGT
CATCATTGTGTTCGCGGTGGTCGCCGTCGTGGTGGGGCGGCTGTGCTCGGGGAAGACCATAATGGGCTACGGCCATTTCGACTTGGAGACTTGGGCGGAGACCAAATGCT
CGTCTTGCATCGACGGAAGGATCAGCCCGCCACCGCCGCCGATGGTCAATGTCTCCGCCCCCACCGCCACTCTTCCGGCGGTCGAAACCCAGCAAGAGACTAAGCAAGAA
GAACCAGCTTCTCAAAATCCACCTCCCAACGCTTGA
Protein sequenceShow/hide protein sequence
MSLPIDPQSPPAPGMQQPYGGHSGSGSVGPVIGVLVVIIVFAVVAVVVGRLCSGKTIMGYGHFDLETWAETKCSSCIDGRISPPPPPMVNVSAPTATLPAVETQQETKQE
EPASQNPPPNA