; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0007954 (gene) of Chayote v1 genome

Gene IDSed0007954
OrganismSechium edule (Chayote v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationLG05:36041801..36045605
RNA-Seq ExpressionSed0007954
SyntenySed0007954
Gene Ontology termsGO:0003824 - catalytic activity (molecular function)
InterPro domainsIPR005135 - Endonuclease/exonuclease/phosphatase
IPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BBH07150.1 TatD related DNase [Prunus dulcis]1.5e-3937.24Show/hide
Query:  ESKQSSMDVAFIKSLWGSRDLSWTCLESTGTRGGIVIIWKDSLSSTADI--------------------IKGVYGPNDPRDRSMLWEEFEELRKKCNPNW
        E+K+  +D   +  +WGSR   W    S G  GGI ++W     S  D                     + G+YGP   R+R   WEE  +L   C   W
Subjt:  ESKQSSMDVAFIKSLWGSRDLSWTCLESTGTRGGIVIIWKDSLSSTADI--------------------IKGVYGPNDPRDRSMLWEEFEELRKKCNPNW

Query:  VMGGDFNTIRWTSEKISHFRQVGITQSMRLFNRFIQEANLSNISLSNGGYTWSNLRINPNLSLLDRFLTSESIQSKFSFVSARRLERICFDHFPVGLSLG
         +GGDFN +R+++EK +  R   +T+SMR FN FIQE NL + +L N  +TWSNLR N     LDRFL S S +  F     + L RI  DH P+ L   
Subjt:  VMGGDFNTIRWTSEKISHFRQVGITQSMRLFNRFIQEANLSNISLSNGGYTWSNLRINPNLSLLDRFLTSESIQSKFSFVSARRLERICFDHFPVGLSLG

Query:  KVSWGPAPFRFFNAWLSHKTLLPLVENWWKDNGLKGVSG
        +V WGP+PFRF N WL H      ++ WW ++   G  G
Subjt:  KVSWGPAPFRFFNAWLSHKTLLPLVENWWKDNGLKGVSG

VVA20479.1 Hypothetical predicted protein, partial [Prunus dulcis]1.5e-3937.24Show/hide
Query:  ESKQSSMDVAFIKSLWGSRDLSWTCLESTGTRGGIVIIWKDSLSSTADI--------------------IKGVYGPNDPRDRSMLWEEFEELRKKCNPNW
        E+K+  +D   +  +WGSR   W    S G  GGI ++W     S  D                     + G+YGP   R+R   WEE  +L   C   W
Subjt:  ESKQSSMDVAFIKSLWGSRDLSWTCLESTGTRGGIVIIWKDSLSSTADI--------------------IKGVYGPNDPRDRSMLWEEFEELRKKCNPNW

Query:  VMGGDFNTIRWTSEKISHFRQVGITQSMRLFNRFIQEANLSNISLSNGGYTWSNLRINPNLSLLDRFLTSESIQSKFSFVSARRLERICFDHFPVGLSLG
         +GGDFN +R+++EK +  R   +T+SMR FN FIQE NL + +L N  +TWSNLR N     LDRFL S S +  F     + L RI  DH P+ L   
Subjt:  VMGGDFNTIRWTSEKISHFRQVGITQSMRLFNRFIQEANLSNISLSNGGYTWSNLRINPNLSLLDRFLTSESIQSKFSFVSARRLERICFDHFPVGLSLG

Query:  KVSWGPAPFRFFNAWLSHKTLLPLVENWWKDNGLKGVSG
        +V WGP+PFRF N WL H      ++ WW ++   G  G
Subjt:  KVSWGPAPFRFFNAWLSHKTLLPLVENWWKDNGLKGVSG

XP_021820446.1 uncharacterized protein LOC110762145 [Prunus avium]1.0e-3737.08Show/hide
Query:  EESKQSSMDVAFIKSLWGSRDLSWTCLESTGTRGGIVIIWKDSLSSTADI--------------------IKGVYGPNDPRDRSMLWEEFEELRKKCNPN
        +E+K+  +D   + S+W SR   W  + STG  GGIVIIW     S  D                     + G+YGP   RDR   W E   L   C  N
Subjt:  EESKQSSMDVAFIKSLWGSRDLSWTCLESTGTRGGIVIIWKDSLSSTADI--------------------IKGVYGPNDPRDRSMLWEEFEELRKKCNPN

Query:  WVMGGDFNTIRWTSEKISHFRQVGITQSMRLFNRFIQEANLSNISLSNGGYTWSNLRINPNLSLLDRFLTSESIQSKFSFVSARRLERICFDHFPVGLSL
        W +GGDFN +R+ S+K +     G+T SMR FN FI + NL +  L N  +TWSN R N     LDRFL +   +  F     + L R+  DH P+ L  
Subjt:  WVMGGDFNTIRWTSEKISHFRQVGITQSMRLFNRFIQEANLSNISLSNGGYTWSNLRINPNLSLLDRFLTSESIQSKFSFVSARRLERICFDHFPVGLSL

Query:  GKVSWGPAPFRFFNAWLSHKTLLPLVENWWKDNGLKGVSG
         K+ WGP PFRF N WL H       ++WW +  L G  G
Subjt:  GKVSWGPAPFRFFNAWLSHKTLLPLVENWWKDNGLKGVSG

XP_022158956.1 uncharacterized protein LOC111025405 [Momordica charantia]9.1e-4237.5Show/hide
Query:  EESKQSSMDVAFIKSLWGSRDLSWTCLESTGTRGGIVIIWKDSLSSTADIIKGV--------------------YGPNDPRDRSMLWEEFEELRKKCNPN
        +E+K S MD+  +KSLW +  ++W+ L+++G   GI+I+W D     A++I+GV                    YGP+      + W+E  +L   C  +
Subjt:  EESKQSSMDVAFIKSLWGSRDLSWTCLESTGTRGGIVIIWKDSLSSTADIIKGV--------------------YGPNDPRDRSMLWEEFEELRKKCNPN

Query:  WVMGGDFNTIRWTSEKISHFRQVGITQSMRLFNRFIQEANLSNISLSNGGYTWSNLRINPNLSLLDRFLTSESIQSKFSFVSARRLERICFDHFPVGLSL
        W++ GDFN  RW+ EK S+ R   +T+SM LFN FI++++L ++ L+NG +TWS    N + SL+D FL +     K     A+R+ R   DHFP+ L  
Subjt:  WVMGGDFNTIRWTSEKISHFRQVGITQSMRLFNRFIQEANLSNISLSNGGYTWSNLRINPNLSLLDRFLTSESIQSKFSFVSARRLERICFDHFPVGLSL

Query:  GKVSWGPAPFRFFNAWLSHKTLLPLVENWWKDNGLKGVSG
        G+ +WG  PFRF N WLSHKT  P +E WW +  L G  G
Subjt:  GKVSWGPAPFRFFNAWLSHKTLLPLVENWWKDNGLKGVSG

XP_028075126.1 uncharacterized protein LOC114277426 [Camellia sinensis]2.7e-3836.93Show/hide
Query:  YEESKQSSMDVAFIKSLWGSRDLSWTCLESTGTRGGIVIIWKDSLSSTADII--------------------KGVYGPNDPRDRSMLWEEFEELRKKCNP
        ++E+K    D  FI+S+WG+R   W  L STG  GGI+I+W D + S  +++                     GVYGPN P  R   W+E   L   C P
Subjt:  YEESKQSSMDVAFIKSLWGSRDLSWTCLESTGTRGGIVIIWKDSLSSTADII--------------------KGVYGPNDPRDRSMLWEEFEELRKKCNP

Query:  NWVMGGDFNTIRWTSEKISHFRQVGITQSMRLFNRFIQEANLSNISLSNGGYTWSNLRINPNLSLLDRFLTSESIQSKFSFVSARRLERICFDHFPVGLS
        NW +G DFN +R  SEK++    V   +SMR F+ FI+E  L +  LSN  +TWSNL+ N     LDRFL +   +  F  +      R+  DHFPV L 
Subjt:  NWVMGGDFNTIRWTSEKISHFRQVGITQSMRLFNRFIQEANLSNISLSNGGYTWSNLRINPNLSLLDRFLTSESIQSKFSFVSARRLERICFDHFPVGLS

Query:  LGKVSWGPAPFRFFNAWLSHKTLLPLVENWWKDNGLKGVSG
             WGP+PFRF N WL +++      +WW++  + G  G
Subjt:  LGKVSWGPAPFRFFNAWLSHKTLLPLVENWWKDNGLKGVSG

TrEMBL top hitse value%identityAlignment
A0A6J1E2G6 uncharacterized protein LOC1110254054.4e-4237.5Show/hide
Query:  EESKQSSMDVAFIKSLWGSRDLSWTCLESTGTRGGIVIIWKDSLSSTADIIKGV--------------------YGPNDPRDRSMLWEEFEELRKKCNPN
        +E+K S MD+  +KSLW +  ++W+ L+++G   GI+I+W D     A++I+GV                    YGP+      + W+E  +L   C  +
Subjt:  EESKQSSMDVAFIKSLWGSRDLSWTCLESTGTRGGIVIIWKDSLSSTADIIKGV--------------------YGPNDPRDRSMLWEEFEELRKKCNPN

Query:  WVMGGDFNTIRWTSEKISHFRQVGITQSMRLFNRFIQEANLSNISLSNGGYTWSNLRINPNLSLLDRFLTSESIQSKFSFVSARRLERICFDHFPVGLSL
        W++ GDFN  RW+ EK S+ R   +T+SM LFN FI++++L ++ L+NG +TWS    N + SL+D FL +     K     A+R+ R   DHFP+ L  
Subjt:  WVMGGDFNTIRWTSEKISHFRQVGITQSMRLFNRFIQEANLSNISLSNGGYTWSNLRINPNLSLLDRFLTSESIQSKFSFVSARRLERICFDHFPVGLSL

Query:  GKVSWGPAPFRFFNAWLSHKTLLPLVENWWKDNGLKGVSG
        G+ +WG  PFRF N WLSHKT  P +E WW +  L G  G
Subjt:  GKVSWGPAPFRFFNAWLSHKTLLPLVENWWKDNGLKGVSG

M5VS59 Reverse transcriptase domain-containing protein (Fragment)2.9e-4137.24Show/hide
Query:  ESKQSSMDVAFIKSLWGSRDLSWTCLESTGTRGGIVIIWKDSLSSTADI--------------------IKGVYGPNDPRDRSMLWEEFEELRKKCNPNW
        E+K+ ++D   +  +WGSR   W    S G  GGI ++W     S  D                     + G+YGP   R+R+  WEE  +L   C   W
Subjt:  ESKQSSMDVAFIKSLWGSRDLSWTCLESTGTRGGIVIIWKDSLSSTADI--------------------IKGVYGPNDPRDRSMLWEEFEELRKKCNPNW

Query:  VMGGDFNTIRWTSEKISHFRQVGITQSMRLFNRFIQEANLSNISLSNGGYTWSNLRINPNLSLLDRFLTSESIQSKFSFVSARRLERICFDHFPVGLSLG
         +GGDFN +R+++EK +  R   +T+SMR FN FIQE NL + +L N  +TWSNLR N     LDRFL S S +  F     + L RI  DH P+ L   
Subjt:  VMGGDFNTIRWTSEKISHFRQVGITQSMRLFNRFIQEANLSNISLSNGGYTWSNLRINPNLSLLDRFLTSESIQSKFSFVSARRLERICFDHFPVGLSLG

Query:  KVSWGPAPFRFFNAWLSHKTLLPLVENWWKDNGLKGVSG
        +V WGP+PFRF N WL+H   +  ++ WW ++ + G  G
Subjt:  KVSWGPAPFRFFNAWLSHKTLLPLVENWWKDNGLKGVSG

M5WJ76 Reverse transcriptase domain-containing protein (Fragment)5.4e-4037.24Show/hide
Query:  ESKQSSMDVAFIKSLWGSRDLSWTCLESTGTRGGIVIIWKDSLSSTADI--------------------IKGVYGPNDPRDRSMLWEEFEELRKKCNPNW
        E+K+  +D   +  +WGSR   W    S G  GGI ++W     S  D                     + G+YGP   R+R+  WEE  +L   C   W
Subjt:  ESKQSSMDVAFIKSLWGSRDLSWTCLESTGTRGGIVIIWKDSLSSTADI--------------------IKGVYGPNDPRDRSMLWEEFEELRKKCNPNW

Query:  VMGGDFNTIRWTSEKISHFRQVGITQSMRLFNRFIQEANLSNISLSNGGYTWSNLRINPNLSLLDRFLTSESIQSKFSFVSARRLERICFDHFPVGLSLG
         +GGDFN +R+++EK +  R   +T+SMR FN FIQE NL +  L N  +TWSNLR N     LDRFL S S +  F     + L RI  DH P+ L   
Subjt:  VMGGDFNTIRWTSEKISHFRQVGITQSMRLFNRFIQEANLSNISLSNGGYTWSNLRINPNLSLLDRFLTSESIQSKFSFVSARRLERICFDHFPVGLSLG

Query:  KVSWGPAPFRFFNAWLSHKTLLPLVENWWKDNGLKGVSG
        +V WGP+PFRF N WL+H      ++ WW ++ + G  G
Subjt:  KVSWGPAPFRFFNAWLSHKTLLPLVENWWKDNGLKGVSG

M5WPQ5 Reverse transcriptase domain-containing protein4.1e-4037.24Show/hide
Query:  ESKQSSMDVAFIKSLWGSRDLSWTCLESTGTRGGIVIIWKDSLSSTADI--------------------IKGVYGPNDPRDRSMLWEEFEELRKKCNPNW
        E+K+  +D   +  +WGSR   W    S G  GGI ++W     S  D                     + G+YGP   R+R+  WEE  +L   C   W
Subjt:  ESKQSSMDVAFIKSLWGSRDLSWTCLESTGTRGGIVIIWKDSLSSTADI--------------------IKGVYGPNDPRDRSMLWEEFEELRKKCNPNW

Query:  VMGGDFNTIRWTSEKISHFRQVGITQSMRLFNRFIQEANLSNISLSNGGYTWSNLRINPNLSLLDRFLTSESIQSKFSFVSARRLERICFDHFPVGLSLG
         +GGDFN +R+++EK +  R   +T+SMR FN FIQE NL +  L N  +TWSNLR N     LDRFL S S +  F     + L RI  DH P+ L   
Subjt:  VMGGDFNTIRWTSEKISHFRQVGITQSMRLFNRFIQEANLSNISLSNGGYTWSNLRINPNLSLLDRFLTSESIQSKFSFVSARRLERICFDHFPVGLSLG

Query:  KVSWGPAPFRFFNAWLSHKTLLPLVENWWKDNGLKGVSG
        +V WGP+PFRF N WL+H      ++ WW ++ + G  G
Subjt:  KVSWGPAPFRFFNAWLSHKTLLPLVENWWKDNGLKGVSG

M5XHS0 Reverse transcriptase domain-containing protein (Fragment)4.1e-4037.29Show/hide
Query:  QSSMDVAFIKSLWGSRDLSWTCLESTGTRGGIVIIWKDSLSSTADI--------------------IKGVYGPNDPRDRSMLWEEFEELRKKCNPNWVMG
        Q ++D   +  +WGSR   W    S G  GGI ++W     S  D                     + G+YGP   R+R+  WEE  +L   C   W +G
Subjt:  QSSMDVAFIKSLWGSRDLSWTCLESTGTRGGIVIIWKDSLSSTADI--------------------IKGVYGPNDPRDRSMLWEEFEELRKKCNPNWVMG

Query:  GDFNTIRWTSEKISHFRQVGITQSMRLFNRFIQEANLSNISLSNGGYTWSNLRINPNLSLLDRFLTSESIQSKFSFVSARRLERICFDHFPVGLSLGKVS
        GDFN +R+++EK +  R   +T+SMR FN FIQE NL + +L N  +TWSNLR N     LDRFL S S +  F     + L RI  DH P+ L   +V 
Subjt:  GDFNTIRWTSEKISHFRQVGITQSMRLFNRFIQEANLSNISLSNGGYTWSNLRINPNLSLLDRFLTSESIQSKFSFVSARRLERICFDHFPVGLSLGKVS

Query:  WGPAPFRFFNAWLSHKTLLPLVENWWKDNGLKGVSG
        WGP+PFRF N WL+H      ++ WW ++ + G  G
Subjt:  WGPAPFRFFNAWLSHKTLLPLVENWWKDNGLKGVSG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTCATGGAAAAATTCCGAACTTTTGCAAGGAAAACATACATCCTGTGAAAGTGCTGCAGAACCATACCCCACCGGAGTTACCATTTTTTCCGGCGATGGAGAGGAA
GAAACCCTTTCGAAGAGATGATGATCCGTCAACATCATCAACAGTGCCTCGATCCTATTTGGCTACATTGACTGAGTATGGTGGCCCTGTTTCTCCGACTCCTTTACGCA
TTCAGGTGCCTGATCCGAATGAAGTCCAGATGGATTATCAGAGCAATGAGTATGAGGAATCAAAGCAGAGTTCAATGGATGTTGCTTTTATTAAAAGCTTATGGGGATCC
AGAGATTTGTCTTGGACTTGTCTGGAATCTACTGGAACTAGGGGAGGTATTGTTATCATTTGGAAGGATTCTTTATCCTCCACAGCCGACATTATCAAAGGGGTGTATGG
ACCAAACGATCCAAGGGATAGATCCATGCTTTGGGAAGAGTTCGAAGAACTAAGGAAAAAGTGCAATCCAAATTGGGTGATGGGTGGTGATTTCAACACCATAAGATGGA
CCAGTGAAAAGATTTCTCATTTCAGGCAAGTGGGGATTACTCAATCGATGAGATTGTTCAATAGGTTTATTCAAGAAGCCAACCTTAGCAATATATCTTTGTCAAATGGT
GGTTACACTTGGTCCAATCTCAGAATCAACCCGAATCTCTCGCTCCTGGATAGATTCCTCACATCTGAATCTATCCAATCAAAGTTCAGCTTTGTATCTGCTAGAAGACT
TGAGAGGATTTGCTTTGATCATTTTCCCGTGGGCCTTTCGCTAGGAAAGGTATCTTGGGGTCCAGCTCCTTTTCGCTTTTTCAATGCCTGGTTAAGCCATAAAACTCTGC
TTCCTTTGGTTGAGAACTGGTGGAAAGACAATGGTCTGAAGGGGGTGTCCGGGCCATAG
mRNA sequenceShow/hide mRNA sequence
ATGATTCATGGAAAAATTCCGAACTTTTGCAAGGAAAACATACATCCTGTGAAAGTGCTGCAGAACCATACCCCACCGGAGTTACCATTTTTTCCGGCGATGGAGAGGAA
GAAACCCTTTCGAAGAGATGATGATCCGTCAACATCATCAACAGTGCCTCGATCCTATTTGGCTACATTGACTGAGTATGGTGGCCCTGTTTCTCCGACTCCTTTACGCA
TTCAGGTGCCTGATCCGAATGAAGTCCAGATGGATTATCAGAGCAATGAGTATGAGGAATCAAAGCAGAGTTCAATGGATGTTGCTTTTATTAAAAGCTTATGGGGATCC
AGAGATTTGTCTTGGACTTGTCTGGAATCTACTGGAACTAGGGGAGGTATTGTTATCATTTGGAAGGATTCTTTATCCTCCACAGCCGACATTATCAAAGGGGTGTATGG
ACCAAACGATCCAAGGGATAGATCCATGCTTTGGGAAGAGTTCGAAGAACTAAGGAAAAAGTGCAATCCAAATTGGGTGATGGGTGGTGATTTCAACACCATAAGATGGA
CCAGTGAAAAGATTTCTCATTTCAGGCAAGTGGGGATTACTCAATCGATGAGATTGTTCAATAGGTTTATTCAAGAAGCCAACCTTAGCAATATATCTTTGTCAAATGGT
GGTTACACTTGGTCCAATCTCAGAATCAACCCGAATCTCTCGCTCCTGGATAGATTCCTCACATCTGAATCTATCCAATCAAAGTTCAGCTTTGTATCTGCTAGAAGACT
TGAGAGGATTTGCTTTGATCATTTTCCCGTGGGCCTTTCGCTAGGAAAGGTATCTTGGGGTCCAGCTCCTTTTCGCTTTTTCAATGCCTGGTTAAGCCATAAAACTCTGC
TTCCTTTGGTTGAGAACTGGTGGAAAGACAATGGTCTGAAGGGGGTGTCCGGGCCATAG
Protein sequenceShow/hide protein sequence
MIHGKIPNFCKENIHPVKVLQNHTPPELPFFPAMERKKPFRRDDDPSTSSTVPRSYLATLTEYGGPVSPTPLRIQVPDPNEVQMDYQSNEYEESKQSSMDVAFIKSLWGS
RDLSWTCLESTGTRGGIVIIWKDSLSSTADIIKGVYGPNDPRDRSMLWEEFEELRKKCNPNWVMGGDFNTIRWTSEKISHFRQVGITQSMRLFNRFIQEANLSNISLSNG
GYTWSNLRINPNLSLLDRFLTSESIQSKFSFVSARRLERICFDHFPVGLSLGKVSWGPAPFRFFNAWLSHKTLLPLVENWWKDNGLKGVSGP