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Sed0007970 (gene) of Chayote v1 genome

Gene IDSed0007970
OrganismSechium edule (Chayote v1)
DescriptionProtein of unknown function, DUF584
Genome locationLG04:42742154..42742818
RNA-Seq ExpressionSed0007970
SyntenySed0007970
Gene Ontology termsNA
InterPro domainsIPR007608 - Senescence regulator S40


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6592046.1 hypothetical protein SDJN03_14392, partial [Cucurbita argyrosperma subsp. sororia]1.6e-3655.14Show/hide
Query:  MDGG--GVSRQSAALWRSFRNGDFEERDVWNVVLHEESAAASKSFDDSKFFGDSSIA---------------------------APKSAPRSIPPRI---
        M GG  GVSRQS+ALWRSFRNGDFEE DVW  VL E+S   SK+ DDS FF DS I                            A +SAPRSIP      
Subjt:  MDGG--GVSRQSAALWRSFRNGDFEERDVWNVVLHEESAAASKSFDDSKFFGDSSIA---------------------------APKSAPRSIPPRI---

Query:  GGKSPRKAGSAEDEDSSGG--------DEEGFEDRVPPHEVIAKRMARAQISSFSVLEGVGRKLKGRDLSKVRNAILTKTGFLES
        G K+PR   S  D+  S G        D+EGF++R+PPHE+IAKR ARAQISSFSV EG+GR LKGRDLSKVRNA+L KTGFLES
Subjt:  GGKSPRKAGSAEDEDSSGG--------DEEGFEDRVPPHEVIAKRMARAQISSFSVLEGVGRKLKGRDLSKVRNAILTKTGFLES

KAG6607798.1 hypothetical protein SDJN03_01140, partial [Cucurbita argyrosperma subsp. sororia]4.9e-3858.76Show/hide
Query:  MDGG--GVSRQSAALWRSFRNGDFEERDVWNVVLHEESAAASKSFDDSKFFGDSSIA--------------------APKSAPRSIPPRI---GGKSPRK
        M GG  G+  QS+ALWRSFRNGDFEE DVWN VL E+S  AS S DD  FF DSSI+                    APKSAPRSIP      G ++P K
Subjt:  MDGG--GVSRQSAALWRSFRNGDFEERDVWNVVLHEESAAASKSFDDSKFFGDSSIA--------------------APKSAPRSIPPRI---GGKSPRK

Query:  ------AGSAEDEDSSGGDEEGFEDRVPPHEVIAKRMARAQISSFSVLEGVGRKLKGRDLSKVRNAILTKTGFLESL
                   +E+    +EEGFE+RVPPHE+IAKR+ RAQISSFSVLEGVGR LKGRDLSKVRNA+LTKTGFLESL
Subjt:  ------AGSAEDEDSSGGDEEGFEDRVPPHEVIAKRMARAQISSFSVLEGVGRKLKGRDLSKVRNAILTKTGFLESL

XP_022139627.1 uncharacterized protein LOC111010482 [Momordica charantia]9.5e-4257.75Show/hide
Query:  MDGG--GVSRQSAALWRSFRNGDFEERDVWNVVLHEESAAASKSFDDSKFFGDSSIA---------------------------APKSAPRSIPPRI---
        M+GG  G+SRQS+ALWRSFRNGDFEE DVW+V+  + +   SKS DDSKFF DSSI                            AP+SAPRSIP      
Subjt:  MDGG--GVSRQSAALWRSFRNGDFEERDVWNVVLHEESAAASKSFDDSKFFGDSSIA---------------------------APKSAPRSIPPRI---

Query:  GGKSPRKAGSAEDEDSSGG---------DEEGFEDRVPPHEVIAKRMARAQISSFSVLEGVGRKLKGRDLSKVRNAILTKTGFLESL
        G K+PRK+    D+D  GG         DEEGF+ RVPPHE+IAKR+ARAQISSFSV EGVGR LKGRDLSKVRNA+LTKTGFLESL
Subjt:  GGKSPRKAGSAEDEDSSGG---------DEEGFEDRVPPHEVIAKRMARAQISSFSVLEGVGRKLKGRDLSKVRNAILTKTGFLESL

XP_022941010.1 uncharacterized protein LOC111446424 [Cucurbita moschata]3.7e-3859.66Show/hide
Query:  MDGG--GVSRQSAALWRSFRNGDFEERDVWNVVLHEESAAASKSFDDSKFFGDSSIA--------------------APKSAPRSIPPRI---GGKSPRK
        M GG  G+  QS+ALWRSFRNGDFEE DVWN VL E+S  AS S DD  FF DSSI+                    APKSAPRSIP      G ++P K
Subjt:  MDGG--GVSRQSAALWRSFRNGDFEERDVWNVVLHEESAAASKSFDDSKFFGDSSIA--------------------APKSAPRSIPPRI---GGKSPRK

Query:  -----AGSAEDEDSSGGDEEGFEDRVPPHEVIAKRMARAQISSFSVLEGVGRKLKGRDLSKVRNAILTKTGFLESL
               + E E+    +EEGFE+RVPPHE+IAKR+ RAQISSFSVLEGVGR LKGRDLSKVRNA+LTKTGFLESL
Subjt:  -----AGSAEDEDSSGGDEEGFEDRVPPHEVIAKRMARAQISSFSVLEGVGRKLKGRDLSKVRNAILTKTGFLESL

XP_023523457.1 uncharacterized protein LOC111787672 [Cucurbita pepo subsp. pepo]3.7e-3859.17Show/hide
Query:  GVSRQSAALWRSFRNGDFEERDVWNVVLHEESAAASKSFDDSKFFGDSSIA--------------------APKSAPRSIPPRI---GGKSPRK----AG
        G+  QS+ALWRSFRNGDFEE DVWN +L E+S  AS S DD  FF DSSI+                    APKSAPRSIP      G ++P K     G
Subjt:  GVSRQSAALWRSFRNGDFEERDVWNVVLHEESAAASKSFDDSKFFGDSSIA--------------------APKSAPRSIPPRI---GGKSPRK----AG

Query:  SAEDEDSSGGDEEGFEDRVPPHEVIAKRMARAQISSFSVLEGVGRKLKGRDLSKVRNAILTKTGFLESL
          ++ +    +EEGFE+RVPPHE+IAKR+ RAQISSFSVLEGVGR LKGRDLSKVRNA+LTKTGFLESL
Subjt:  SAEDEDSSGGDEEGFEDRVPPHEVIAKRMARAQISSFSVLEGVGRKLKGRDLSKVRNAILTKTGFLESL

TrEMBL top hitse value%identityAlignment
A0A5A7SG90 Casein kinase II subunit beta-26.4e-2847.25Show/hide
Query:  MDGGGVSRQSAALWRSFRNGDFEERDVWNVVLHEESAAASKSFDDSKFFGDSSIAAPKSAPRSIPPRIGG-----------------KSPRK--------
        MDG   +  + ALWRSFRNGDFEE+DVWNV+  +ES   S +      F  +  +   SA R IP   GG                 K+PR         
Subjt:  MDGGGVSRQSAALWRSFRNGDFEERDVWNVVLHEESAAASKSFDDSKFFGDSSIAAPKSAPRSIPPRIGG-----------------KSPRK--------

Query:  -----------AGSAEDEDSSGGDEEGFEDRVPPHEVIAKRMARAQISSFSVLEGVGRKLKGRDLSKVRNAILTKTGFLESL
                     S E+E+    + EG E RVPPHE+IAKR+ARAQISSFSV EG GR LKGRDLSKVRNA+LTKTGFLES+
Subjt:  -----------AGSAEDEDSSGGDEEGFEDRVPPHEVIAKRMARAQISSFSVLEGVGRKLKGRDLSKVRNAILTKTGFLESL

A0A6J1CEH3 uncharacterized protein LOC1110104824.6e-4257.75Show/hide
Query:  MDGG--GVSRQSAALWRSFRNGDFEERDVWNVVLHEESAAASKSFDDSKFFGDSSIA---------------------------APKSAPRSIPPRI---
        M+GG  G+SRQS+ALWRSFRNGDFEE DVW+V+  + +   SKS DDSKFF DSSI                            AP+SAPRSIP      
Subjt:  MDGG--GVSRQSAALWRSFRNGDFEERDVWNVVLHEESAAASKSFDDSKFFGDSSIA---------------------------APKSAPRSIPPRI---

Query:  GGKSPRKAGSAEDEDSSGG---------DEEGFEDRVPPHEVIAKRMARAQISSFSVLEGVGRKLKGRDLSKVRNAILTKTGFLESL
        G K+PRK+    D+D  GG         DEEGF+ RVPPHE+IAKR+ARAQISSFSV EGVGR LKGRDLSKVRNA+LTKTGFLESL
Subjt:  GGKSPRKAGSAEDEDSSGG---------DEEGFEDRVPPHEVIAKRMARAQISSFSVLEGVGRKLKGRDLSKVRNAILTKTGFLESL

A0A6J1F7L6 uncharacterized protein LOC1114428612.7e-3454.05Show/hide
Query:  MDGG--GVSRQSAALWRSFRNGDFEERDVWNVVLHEESAAASKSFDDSKFFGDSSI---------------------------AAPKSAPRSIPPRI---
        M GG  G SRQS+ALWRSFRNGDFEE DVW  VL E+S   SK+ DDS FF DS I                            A +SAPRSIP      
Subjt:  MDGG--GVSRQSAALWRSFRNGDFEERDVWNVVLHEESAAASKSFDDSKFFGDSSI---------------------------AAPKSAPRSIPPRI---

Query:  GGKSPRKAGSAEDEDSSGG--------DEEGFEDRVPPHEVIAKRMARAQISSFSVLEGVGRKLKGRDLSKVRNAILTKTGFLES
        G K+ R   S  D+  S G        DEEGF++R+PPHE+IAKR ARAQISSFSV EG+GR LKGRDLS+VRNA+L KTGFLES
Subjt:  GGKSPRKAGSAEDEDSSGG--------DEEGFEDRVPPHEVIAKRMARAQISSFSVLEGVGRKLKGRDLSKVRNAILTKTGFLES

A0A6J1FSC1 uncharacterized protein LOC1114464241.8e-3859.66Show/hide
Query:  MDGG--GVSRQSAALWRSFRNGDFEERDVWNVVLHEESAAASKSFDDSKFFGDSSIA--------------------APKSAPRSIPPRI---GGKSPRK
        M GG  G+  QS+ALWRSFRNGDFEE DVWN VL E+S  AS S DD  FF DSSI+                    APKSAPRSIP      G ++P K
Subjt:  MDGG--GVSRQSAALWRSFRNGDFEERDVWNVVLHEESAAASKSFDDSKFFGDSSIA--------------------APKSAPRSIPPRI---GGKSPRK

Query:  -----AGSAEDEDSSGGDEEGFEDRVPPHEVIAKRMARAQISSFSVLEGVGRKLKGRDLSKVRNAILTKTGFLESL
               + E E+    +EEGFE+RVPPHE+IAKR+ RAQISSFSVLEGVGR LKGRDLSKVRNA+LTKTGFLESL
Subjt:  -----AGSAEDEDSSGGDEEGFEDRVPPHEVIAKRMARAQISSFSVLEGVGRKLKGRDLSKVRNAILTKTGFLESL

A0A6J1IX28 uncharacterized protein LOC1114806859.9e-3758.52Show/hide
Query:  MDGG--GVSRQSAALWRSFRNGDFEERDVWNVVLHEESAAASKSFDDSKFFGDSSIA--------------------APKSAPRSIPPRI---GGKSPRK
        M GG  G+  QS+ALWRSFRNGDFEE DVWN VL E+S  A  S DD  FF DSSI+                    APKSAPRSIP      G ++P K
Subjt:  MDGG--GVSRQSAALWRSFRNGDFEERDVWNVVLHEESAAASKSFDDSKFFGDSSIA--------------------APKSAPRSIPPRI---GGKSPRK

Query:  AGS-----AEDEDSSGGDEEGFEDRVPPHEVIAKRMARAQISSFSVLEGVGRKLKGRDLSKVRNAILTKTGFLESL
                 E E+    +EEG E+RVPPHE+IAKR+ RAQISSFSVLEGVGR LKGRDLSKVRNA+LTKTGFLESL
Subjt:  AGS-----AEDEDSSGGDEEGFEDRVPPHEVIAKRMARAQISSFSVLEGVGRKLKGRDLSKVRNAILTKTGFLESL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G15040.1 Protein of unknown function, DUF5843.2e-1142.7Show/hide
Query:  PKSAPRSIPPRIGGKSPRKAGSAEDEDSSGGDEEGFE-DRVPPHEVIAKRMARAQISSFSVLEGVGRKLKGRDLSKVRNAILTKTGFLE
        P+SAP  +P        R     +  D    DEE  E + +PPHE++A+ +A++ + S SVLEG GR LKGRDL +VRNA+  +TGF++
Subjt:  PKSAPRSIPPRIGGKSPRKAGSAEDEDSSGGDEEGFE-DRVPPHEVIAKRMARAQISSFSVLEGVGRKLKGRDLSKVRNAILTKTGFLE

AT3G45210.1 Protein of unknown function, DUF5841.3e-1255.38Show/hide
Query:  EDEDSSGGDEEGFEDRVPPHEVIAKRMARAQISSFSVLEGVGRKLKGRDLSKVRNAILTKTGFLE
        E+  S   D++G E ++PPHE +AK     +++SFSV EG+GR LKGRD+S+VRNAIL KTGFL+
Subjt:  EDEDSSGGDEEGFEDRVPPHEVIAKRMARAQISSFSVLEGVGRKLKGRDLSKVRNAILTKTGFLE

AT4G04630.1 Protein of unknown function, DUF5841.9e-1941.26Show/hide
Query:  DFEERDVWNVVLHEESAAASKSFDDSKFFGDSSIAA---------------PKSAPRSIP--PRIGG--KSPRKAGSAEDEDSSGGDEEGFEDRVPPHEV
        +F+E DVW+V+   E+++       S F   SS ++                 SAP ++P   ++ G  KS R++       +   DE+     VPPHE 
Subjt:  DFEERDVWNVVLHEESAAASKSFDDSKFFGDSSIAA---------------PKSAPRSIP--PRIGG--KSPRKAGSAEDEDSSGGDEEGFEDRVPPHEV

Query:  IAKRMARAQISSFSVLEGVGRKLKGRDLSKVRNAILTKTGFLE
        +A+++AR QISSFS+ EGVGR LKGRDLSKVRNA+L+KTGFLE
Subjt:  IAKRMARAQISSFSVLEGVGRKLKGRDLSKVRNAILTKTGFLE

AT4G21970.1 Protein of unknown function, DUF5841.9e-1944.06Show/hide
Query:  DFEERDVWNVVLHEESAAASKSFDDSK--FFGDSSIAA---PK-----------SAPRSIP--PRIGGKSPRKAGSAEDEDSSGGDEEGFEDRVPPHEVI
        +F+E +VW+V+   E+         S   F   SS +A   PK           SAP +IP   ++ G S +   S     +   D+EG    VPPHE++
Subjt:  DFEERDVWNVVLHEESAAASKSFDDSK--FFGDSSIAA---PK-----------SAPRSIP--PRIGGKSPRKAGSAEDEDSSGGDEEGFEDRVPPHEVI

Query:  AKRMARAQISSFSVLEGVGRKLKGRDLSKVRNAILTKTGFLES
        AKR+AR QISSFS+ EG+GR LKGRDLSK RNA+LT+TGFLES
Subjt:  AKRMARAQISSFSVLEGVGRKLKGRDLSKVRNAILTKTGFLES

AT5G60680.1 Protein of unknown function, DUF5846.4e-1239.26Show/hide
Query:  DFEERDVWNVVLHEESAAASKSFDDSKFFGD---------SSIAAPKSAPRSIPP----RIGGKSPRKAGSAEDEDSSGGDEEGFEDRVPPHEVIAKRMA
        +F+E D++N + H +S    +    S   G          SS AA  S P ++P       G     +  S ED D    D E   D +PPHE +AK   
Subjt:  DFEERDVWNVVLHEESAAASKSFDDSKFFGD---------SSIAAPKSAPRSIPP----RIGGKSPRKAGSAEDEDSSGGDEEGFEDRVPPHEVIAKRMA

Query:  RAQISSFSVLEGVGRKLKGRDLSKVRNAILTKTGF
          +++SFSV EGVGR LKGRDLS+VRNAI  K GF
Subjt:  RAQISSFSVLEGVGRKLKGRDLSKVRNAILTKTGF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGGCGGCGGCGTGAGCAGGCAGAGCGCCGCTCTGTGGCGGTCATTCCGAAACGGCGATTTCGAAGAACGCGACGTCTGGAACGTCGTCCTCCACGAGGAGTCAGC
CGCGGCTTCCAAATCATTCGACGATTCGAAGTTCTTCGGCGATTCGTCCATCGCGGCTCCGAAATCGGCTCCGAGATCCATTCCGCCGCGCATCGGAGGGAAAAGCCCTA
GGAAGGCCGGTTCGGCGGAGGACGAGGATTCGAGCGGCGGCGACGAGGAAGGATTTGAAGACAGAGTTCCGCCGCATGAAGTGATAGCGAAGAGGATGGCTAGGGCACAG
ATTTCGTCGTTTTCTGTGTTGGAAGGAGTTGGGAGAAAACTGAAAGGGAGAGATCTGAGCAAAGTAAGGAATGCCATTCTTACCAAAACTGGTTTTCTCGAATCGCTATG
A
mRNA sequenceShow/hide mRNA sequence
TCAAAAACGACGTCGTCCAGACCCCCATTTCCCTTTTCCTCTTTAAAAACCTCTCAAATTCCTCGCAGACTCCTTAATCTCCATCTCTGTAGCCATGGACGGCGGCGGCG
TGAGCAGGCAGAGCGCCGCTCTGTGGCGGTCATTCCGAAACGGCGATTTCGAAGAACGCGACGTCTGGAACGTCGTCCTCCACGAGGAGTCAGCCGCGGCTTCCAAATCA
TTCGACGATTCGAAGTTCTTCGGCGATTCGTCCATCGCGGCTCCGAAATCGGCTCCGAGATCCATTCCGCCGCGCATCGGAGGGAAAAGCCCTAGGAAGGCCGGTTCGGC
GGAGGACGAGGATTCGAGCGGCGGCGACGAGGAAGGATTTGAAGACAGAGTTCCGCCGCATGAAGTGATAGCGAAGAGGATGGCTAGGGCACAGATTTCGTCGTTTTCTG
TGTTGGAAGGAGTTGGGAGAAAACTGAAAGGGAGAGATCTGAGCAAAGTAAGGAATGCCATTCTTACCAAAACTGGTTTTCTCGAATCGCTATGACATTTCATTTTACCT
TTAACCAGGGACTTTGTATATAATTTTCTCTTTTTTCTACATTTCAATATTCTGCTTAATATTTTGTTTTTCTTTATTTTATTTTGGTTGCAATAAAGATATTTCTTACT
TGGTT
Protein sequenceShow/hide protein sequence
MDGGGVSRQSAALWRSFRNGDFEERDVWNVVLHEESAAASKSFDDSKFFGDSSIAAPKSAPRSIPPRIGGKSPRKAGSAEDEDSSGGDEEGFEDRVPPHEVIAKRMARAQ
ISSFSVLEGVGRKLKGRDLSKVRNAILTKTGFLESL