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Sed0007988 (gene) of Chayote v1 genome

Gene IDSed0007988
OrganismSechium edule (Chayote v1)
DescriptionL10-interacting MYB domain-containing protein-like isoform X2
Genome locationLG07:20716793..20717664
RNA-Seq ExpressionSed0007988
SyntenySed0007988
Gene Ontology termsNA
InterPro domainsIPR024752 - Myb/SANT-like domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008443406.1 PREDICTED: uncharacterized protein LOC103487000 isoform X1 [Cucumis melo]1.1e-6852.42Show/hide
Query:  MEEAVVKGNRPTTTFTITSWTFMKDELFAKAGYTYTHDHLKNKFNHLRKVYKDFKSLLNDVSGKGWDPVLGTITLEEEQWTNLVK---------------
        ME+ V KGNRPTTTFT TSWT++K++L+ K GY Y+H+ LKNK+N LR  YK+FK LL+D++GKGWDPVLGTITL E QWTNL+K               
Subjt:  MEEAVVKGNRPTTTFTITSWTFMKDELFAKAGYTYTHDHLKNKFNHLRKVYKDFKSLLNDVSGKGWDPVLGTITLEEEQWTNLVK---------------

Query:  --KLMRIYGDTMA-TGIHSLPSTNIQLDFEDENRTEGCAPMGSE---NNKDENQDQSSISKKTKRKRGASNETMETYVQAYI------------------
          KLM IYGDT+A T + +LPST +  D E +N+TE  APM +E   NN+DEN  QSS+SKK+KRKR   N+ M ++ +AY+                  
Subjt:  --KLMRIYGDTMA-TGIHSLPSTNIQLDFEDENRTEGCAPMGSE---NNKDENQDQSSISKKTKRKRGASNETMETYVQAYI------------------

Query:  -------SPQAKDGVDESLDKCLEILNSMVDIDDRAYSNILKRLIEDTTWRRAFLGIPESKRRGFINNI
               S +A+D  DE L+KC++ILNSMVDIDD+AY+ +LK+L+ DTTWR+AFL IPES+RRGF+NN+
Subjt:  -------SPQAKDGVDESLDKCLEILNSMVDIDDRAYSNILKRLIEDTTWRRAFLGIPESKRRGFINNI

XP_016899632.1 PREDICTED: L10-interacting MYB domain-containing protein-like isoform X2 [Cucumis melo]1.1e-6852.42Show/hide
Query:  MEEAVVKGNRPTTTFTITSWTFMKDELFAKAGYTYTHDHLKNKFNHLRKVYKDFKSLLNDVSGKGWDPVLGTITLEEEQWTNLVK---------------
        ME+ V KGNRPTTTFT TSWT++K++L+ K GY Y+H+ LKNK+N LR  YK+FK LL+D++GKGWDPVLGTITL E QWTNL+K               
Subjt:  MEEAVVKGNRPTTTFTITSWTFMKDELFAKAGYTYTHDHLKNKFNHLRKVYKDFKSLLNDVSGKGWDPVLGTITLEEEQWTNLVK---------------

Query:  --KLMRIYGDTMA-TGIHSLPSTNIQLDFEDENRTEGCAPMGSE---NNKDENQDQSSISKKTKRKRGASNETMETYVQAYI------------------
          KLM IYGDT+A T + +LPST +  D E +N+TE  APM +E   NN+DEN  QSS+SKK+KRKR   N+ M ++ +AY+                  
Subjt:  --KLMRIYGDTMA-TGIHSLPSTNIQLDFEDENRTEGCAPMGSE---NNKDENQDQSSISKKTKRKRGASNETMETYVQAYI------------------

Query:  -------SPQAKDGVDESLDKCLEILNSMVDIDDRAYSNILKRLIEDTTWRRAFLGIPESKRRGFINNI
               S +A+D  DE L+KC++ILNSMVDIDD+AY+ +LK+L+ DTTWR+AFL IPES+RRGF+NN+
Subjt:  -------SPQAKDGVDESLDKCLEILNSMVDIDDRAYSNILKRLIEDTTWRRAFLGIPESKRRGFINNI

XP_038904552.1 L10-interacting MYB domain-containing protein-like isoform X1 [Benincasa hispida]1.5e-7054.31Show/hide
Query:  MEEAVVKGNRPTTTFTITSWTFMKDELFAKAGYTYTHDHLKNKFNHLRKVYKDFKSLLNDVSGKGWDPVLGTITLEEEQWTNLVK---------------
        MEE V KGNRPTTTFT TSWT++K++L+ + GY YTH+ LKNK+N LR  YK+FK LL D++GKGWDPVLGTITLEEEQWTNL+K               
Subjt:  MEEAVVKGNRPTTTFTITSWTFMKDELFAKAGYTYTHDHLKNKFNHLRKVYKDFKSLLNDVSGKGWDPVLGTITLEEEQWTNLVK---------------

Query:  --KLMRIYGDTMATGIHSLPSTNIQLDFEDENRTEGCAPMGSE---NNKDENQDQSSISKKTKRKRGASNETMETYVQAYI-------------------
          KLMRIYGDT+A   H+LPS+ +  D E +N+TE  +PM +E   NN+DEN  QSS+SKK+KRKR   N+ M ++ +AYI                   
Subjt:  --KLMRIYGDTMATGIHSLPSTNIQLDFEDENRTEGCAPMGSE---NNKDENQDQSSISKKTKRKRGASNETMETYVQAYI-------------------

Query:  ------SPQAKDGVDESLDKCLEILNSMVDIDDRAYSNILKRLIEDTTWRRAFLGIPESKRRGFINN
              S  A+D  DE L+KC +ILNSMVDIDD+AY+ ILK+L+ DTTWR+AFL IPES+R+GFINN
Subjt:  ------SPQAKDGVDESLDKCLEILNSMVDIDDRAYSNILKRLIEDTTWRRAFLGIPESKRRGFINN

XP_038904553.1 L10-interacting MYB domain-containing protein-like isoform X2 [Benincasa hispida]1.5e-7054.31Show/hide
Query:  MEEAVVKGNRPTTTFTITSWTFMKDELFAKAGYTYTHDHLKNKFNHLRKVYKDFKSLLNDVSGKGWDPVLGTITLEEEQWTNLVK---------------
        MEE V KGNRPTTTFT TSWT++K++L+ + GY YTH+ LKNK+N LR  YK+FK LL D++GKGWDPVLGTITLEEEQWTNL+K               
Subjt:  MEEAVVKGNRPTTTFTITSWTFMKDELFAKAGYTYTHDHLKNKFNHLRKVYKDFKSLLNDVSGKGWDPVLGTITLEEEQWTNLVK---------------

Query:  --KLMRIYGDTMATGIHSLPSTNIQLDFEDENRTEGCAPMGSE---NNKDENQDQSSISKKTKRKRGASNETMETYVQAYI-------------------
          KLMRIYGDT+A   H+LPS+ +  D E +N+TE  +PM +E   NN+DEN  QSS+SKK+KRKR   N+ M ++ +AYI                   
Subjt:  --KLMRIYGDTMATGIHSLPSTNIQLDFEDENRTEGCAPMGSE---NNKDENQDQSSISKKTKRKRGASNETMETYVQAYI-------------------

Query:  ------SPQAKDGVDESLDKCLEILNSMVDIDDRAYSNILKRLIEDTTWRRAFLGIPESKRRGFINN
              S  A+D  DE L+KC +ILNSMVDIDD+AY+ ILK+L+ DTTWR+AFL IPES+R+GFINN
Subjt:  ------SPQAKDGVDESLDKCLEILNSMVDIDDRAYSNILKRLIEDTTWRRAFLGIPESKRRGFINN

XP_038904554.1 L10-interacting MYB domain-containing protein-like isoform X3 [Benincasa hispida]1.5e-7054.31Show/hide
Query:  MEEAVVKGNRPTTTFTITSWTFMKDELFAKAGYTYTHDHLKNKFNHLRKVYKDFKSLLNDVSGKGWDPVLGTITLEEEQWTNLVK---------------
        MEE V KGNRPTTTFT TSWT++K++L+ + GY YTH+ LKNK+N LR  YK+FK LL D++GKGWDPVLGTITLEEEQWTNL+K               
Subjt:  MEEAVVKGNRPTTTFTITSWTFMKDELFAKAGYTYTHDHLKNKFNHLRKVYKDFKSLLNDVSGKGWDPVLGTITLEEEQWTNLVK---------------

Query:  --KLMRIYGDTMATGIHSLPSTNIQLDFEDENRTEGCAPMGSE---NNKDENQDQSSISKKTKRKRGASNETMETYVQAYI-------------------
          KLMRIYGDT+A   H+LPS+ +  D E +N+TE  +PM +E   NN+DEN  QSS+SKK+KRKR   N+ M ++ +AYI                   
Subjt:  --KLMRIYGDTMATGIHSLPSTNIQLDFEDENRTEGCAPMGSE---NNKDENQDQSSISKKTKRKRGASNETMETYVQAYI-------------------

Query:  ------SPQAKDGVDESLDKCLEILNSMVDIDDRAYSNILKRLIEDTTWRRAFLGIPESKRRGFINN
              S  A+D  DE L+KC +ILNSMVDIDD+AY+ ILK+L+ DTTWR+AFL IPES+R+GFINN
Subjt:  ------SPQAKDGVDESLDKCLEILNSMVDIDDRAYSNILKRLIEDTTWRRAFLGIPESKRRGFINN

TrEMBL top hitse value%identityAlignment
A0A1S3B8P1 uncharacterized protein LOC103487000 isoform X15.1e-6952.42Show/hide
Query:  MEEAVVKGNRPTTTFTITSWTFMKDELFAKAGYTYTHDHLKNKFNHLRKVYKDFKSLLNDVSGKGWDPVLGTITLEEEQWTNLVK---------------
        ME+ V KGNRPTTTFT TSWT++K++L+ K GY Y+H+ LKNK+N LR  YK+FK LL+D++GKGWDPVLGTITL E QWTNL+K               
Subjt:  MEEAVVKGNRPTTTFTITSWTFMKDELFAKAGYTYTHDHLKNKFNHLRKVYKDFKSLLNDVSGKGWDPVLGTITLEEEQWTNLVK---------------

Query:  --KLMRIYGDTMA-TGIHSLPSTNIQLDFEDENRTEGCAPMGSE---NNKDENQDQSSISKKTKRKRGASNETMETYVQAYI------------------
          KLM IYGDT+A T + +LPST +  D E +N+TE  APM +E   NN+DEN  QSS+SKK+KRKR   N+ M ++ +AY+                  
Subjt:  --KLMRIYGDTMA-TGIHSLPSTNIQLDFEDENRTEGCAPMGSE---NNKDENQDQSSISKKTKRKRGASNETMETYVQAYI------------------

Query:  -------SPQAKDGVDESLDKCLEILNSMVDIDDRAYSNILKRLIEDTTWRRAFLGIPESKRRGFINNI
               S +A+D  DE L+KC++ILNSMVDIDD+AY+ +LK+L+ DTTWR+AFL IPES+RRGF+NN+
Subjt:  -------SPQAKDGVDESLDKCLEILNSMVDIDDRAYSNILKRLIEDTTWRRAFLGIPESKRRGFINNI

A0A1S3CFA7 L10-interacting MYB domain-containing protein-like4.6e-3336.4Show/hide
Query:  MEEAVVKGNRPTTTFTITSWTFMKDELFAKAGYTYTHDHLKNKFNHLRKVYKDFKSLLNDVSGKGWDPVLGTITLEEEQWTNLVKKLMRIYGDTMATGIH
        M+E V KGNRPTTTFT TSW +M+ EL A  GY Y+HD LKNKFN LRK+ K FK +L+D++G GWDP+ G I                           
Subjt:  MEEAVVKGNRPTTTFTITSWTFMKDELFAKAGYTYTHDHLKNKFNHLRKVYKDFKSLLNDVSGKGWDPVLGTITLEEEQWTNLVKKLMRIYGDTMATGIH

Query:  SLPSTNIQLDFEDENRTEGCAPMGSENNKDENQDQSSISKKTKRKRGASNETMETYVQAY---------------------------ISPQAKDGVDESL
        + PST +  DFEDEN  E      ++   +EN D+    K+ +R R   +     ++  Y                            S +  D + E L
Subjt:  SLPSTNIQLDFEDENRTEGCAPMGSENNKDENQDQSSISKKTKRKRGASNETMETYVQAY---------------------------ISPQAKDGVDESL

Query:  DKCLEILNSMVDIDDRAYSNILKRLIEDTTWRRAFLGIPESKRRGFINNI
         +CL+IL++M D+D   YS ILK L  D  WR+ FL +P+S++R FIN++
Subjt:  DKCLEILNSMVDIDDRAYSNILKRLIEDTTWRRAFLGIPESKRRGFINNI

A0A1S3CTN1 uncharacterized protein LOC1035043231.3e-2441.14Show/hide
Query:  MKDELFAKAGYTYTHDHLKNKFNHLRKVYKDFKSLLNDVSGKGWDPVLGTITLEEEQWTNLVK-----------------KLMRIYGDTMATGIHSLPST
        M+ +L A AGY Y+HD LKNKFN LR+ YKDFK +L+D++G GWDP+LGT+ LE+EQW  L K                 KL+RI+GDT ATG+++ PST
Subjt:  MKDELFAKAGYTYTHDHLKNKFNHLRKVYKDFKSLLNDVSGKGWDPVLGTITLEEEQWTNLVK-----------------KLMRIYGDTMATGIHSLPST

Query:  NIQLDFEDENRTEGCAPMG---SENNKDENQDQSSISKKTKRKRGASNETMETYVQAY
         +  D EDEN  +  +       ENNK +++      K+ +RK+        +++  Y
Subjt:  NIQLDFEDENRTEGCAPMG---SENNKDENQDQSSISKKTKRKRGASNETMETYVQAY

A0A1S4DUG7 L10-interacting MYB domain-containing protein-like isoform X25.1e-6952.42Show/hide
Query:  MEEAVVKGNRPTTTFTITSWTFMKDELFAKAGYTYTHDHLKNKFNHLRKVYKDFKSLLNDVSGKGWDPVLGTITLEEEQWTNLVK---------------
        ME+ V KGNRPTTTFT TSWT++K++L+ K GY Y+H+ LKNK+N LR  YK+FK LL+D++GKGWDPVLGTITL E QWTNL+K               
Subjt:  MEEAVVKGNRPTTTFTITSWTFMKDELFAKAGYTYTHDHLKNKFNHLRKVYKDFKSLLNDVSGKGWDPVLGTITLEEEQWTNLVK---------------

Query:  --KLMRIYGDTMA-TGIHSLPSTNIQLDFEDENRTEGCAPMGSE---NNKDENQDQSSISKKTKRKRGASNETMETYVQAYI------------------
          KLM IYGDT+A T + +LPST +  D E +N+TE  APM +E   NN+DEN  QSS+SKK+KRKR   N+ M ++ +AY+                  
Subjt:  --KLMRIYGDTMA-TGIHSLPSTNIQLDFEDENRTEGCAPMGSE---NNKDENQDQSSISKKTKRKRGASNETMETYVQAYI------------------

Query:  -------SPQAKDGVDESLDKCLEILNSMVDIDDRAYSNILKRLIEDTTWRRAFLGIPESKRRGFINNI
               S +A+D  DE L+KC++ILNSMVDIDD+AY+ +LK+L+ DTTWR+AFL IPES+RRGF+NN+
Subjt:  -------SPQAKDGVDESLDKCLEILNSMVDIDDRAYSNILKRLIEDTTWRRAFLGIPESKRRGFINNI

A0A5A7UDA1 L10-interacting MYB domain-containing protein-like isoform X24.5e-4149.02Show/hide
Query:  WDPVLGTITLEEEQWTNLVK-----------------KLMRIYGDTMA-TGIHSLPSTNIQLDFEDENRTEGCAPMGSE---NNKDENQDQSSISKKTKR
        WDPVLGTITL E QWTNL+K                 KLM IYGDT+A T + +LPST +  D E +N+TE  APM +E   NN+DEN  QSS+SKK+KR
Subjt:  WDPVLGTITLEEEQWTNLVK-----------------KLMRIYGDTMA-TGIHSLPSTNIQLDFEDENRTEGCAPMGSE---NNKDENQDQSSISKKTKR

Query:  KRGASNETMETYVQAYI-------------------------SPQAKDGVDESLDKCLEILNSMVDIDDRAYSNILKRLIEDTTWRRAFLGIPESKRRGF
        KR   N+ M ++ +AY+                         S +A+D  DE L+KC++ILNSMVDIDD+AY+ +LK+L+ DTTWR+AFL IPES+RRGF
Subjt:  KRGASNETMETYVQAYI-------------------------SPQAKDGVDESLDKCLEILNSMVDIDDRAYSNILKRLIEDTTWRRAFLGIPESKRRGF

Query:  INNI
        +NN+
Subjt:  INNI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G24960.1 unknown protein6.5e-0833.73Show/hide
Query:  EAVVKGNRPTTTFTITSWTFMKDELFAKAGYTYTHDHLKNKFNHLRKVYKDFKSLLNDVSGKGWDPVLGTITLEEEQWTNLVK
        E V  GNR   TF  ++W  M     AK G  +  D LKN++ HLR++Y D K LL + +G  WD     +  +++ W   ++
Subjt:  EAVVKGNRPTTTFTITSWTFMKDELFAKAGYTYTHDHLKNKFNHLRKVYKDFKSLLNDVSGKGWDPVLGTITLEEEQWTNLVK

AT2G24960.2 unknown protein6.5e-0833.73Show/hide
Query:  EAVVKGNRPTTTFTITSWTFMKDELFAKAGYTYTHDHLKNKFNHLRKVYKDFKSLLNDVSGKGWDPVLGTITLEEEQWTNLVK
        E V  GNR   TF  ++W  M     AK G  +  D LKN++ HLR++Y D K LL + +G  WD     +  +++ W   ++
Subjt:  EAVVKGNRPTTTFTITSWTFMKDELFAKAGYTYTHDHLKNKFNHLRKVYKDFKSLLNDVSGKGWDPVLGTITLEEEQWTNLVK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGAAGCGGTTGTGAAAGGAAATCGCCCAACTACAACCTTTACTATAACTAGTTGGACTTTTATGAAGGATGAACTATTTGCTAAAGCTGGTTATACTTATACTCA
CGATCATTTGAAGAATAAGTTTAACCATCTAAGAAAAGTTTATAAAGATTTCAAAAGCTTGTTGAATGATGTTAGTGGAAAAGGTTGGGATCCAGTGTTGGGTACTATTA
CTTTAGAAGAGGAGCAGTGGACTAACCTTGTTAAGAAGTTGATGAGAATATATGGAGATACAATGGCAACTGGTATCCATTCTCTACCATCAACAAATATTCAATTGGAT
TTTGAAGATGAAAATAGAACTGAAGGTTGTGCTCCTATGGGAAGTGAAAATAATAAAGATGAAAACCAAGACCAAAGTAGCATTAGCAAGAAAACTAAAAGAAAGAGAGG
AGCTTCCAATGAAACCATGGAAACTTACGTTCAAGCTTATATTTCACCACAAGCAAAAGATGGTGTTGATGAAAGCTTGGACAAATGCCTTGAAATTTTGAATAGTATGG
TTGATATTGATGACAGAGCCTATTCAAACATATTGAAACGTTTGATTGAAGACACTACTTGGAGACGAGCATTTTTGGGCATTCCCGAGTCAAAGAGGAGAGGGTTTATC
AATAACATTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGAAGCGGTTGTGAAAGGAAATCGCCCAACTACAACCTTTACTATAACTAGTTGGACTTTTATGAAGGATGAACTATTTGCTAAAGCTGGTTATACTTATACTCA
CGATCATTTGAAGAATAAGTTTAACCATCTAAGAAAAGTTTATAAAGATTTCAAAAGCTTGTTGAATGATGTTAGTGGAAAAGGTTGGGATCCAGTGTTGGGTACTATTA
CTTTAGAAGAGGAGCAGTGGACTAACCTTGTTAAGAAGTTGATGAGAATATATGGAGATACAATGGCAACTGGTATCCATTCTCTACCATCAACAAATATTCAATTGGAT
TTTGAAGATGAAAATAGAACTGAAGGTTGTGCTCCTATGGGAAGTGAAAATAATAAAGATGAAAACCAAGACCAAAGTAGCATTAGCAAGAAAACTAAAAGAAAGAGAGG
AGCTTCCAATGAAACCATGGAAACTTACGTTCAAGCTTATATTTCACCACAAGCAAAAGATGGTGTTGATGAAAGCTTGGACAAATGCCTTGAAATTTTGAATAGTATGG
TTGATATTGATGACAGAGCCTATTCAAACATATTGAAACGTTTGATTGAAGACACTACTTGGAGACGAGCATTTTTGGGCATTCCCGAGTCAAAGAGGAGAGGGTTTATC
AATAACATTTAA
Protein sequenceShow/hide protein sequence
MEEAVVKGNRPTTTFTITSWTFMKDELFAKAGYTYTHDHLKNKFNHLRKVYKDFKSLLNDVSGKGWDPVLGTITLEEEQWTNLVKKLMRIYGDTMATGIHSLPSTNIQLD
FEDENRTEGCAPMGSENNKDENQDQSSISKKTKRKRGASNETMETYVQAYISPQAKDGVDESLDKCLEILNSMVDIDDRAYSNILKRLIEDTTWRRAFLGIPESKRRGFI
NNI