; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0007997 (gene) of Chayote v1 genome

Gene IDSed0007997
OrganismSechium edule (Chayote v1)
Descriptionbinding partner of ACD11 1
Genome locationLG03:14789071..14794371
RNA-Seq ExpressionSed0007997
SyntenySed0007997
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR034360 - Vip1-like, RNA recognition motif, plant
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8652335.1 hypothetical protein Csa_022102 [Cucumis sativus]1.8e-12389.01Show/hide
Query:  MQSQIPTRTVRVNHVSDLATEREIHEFFSFSGEIEHIEIQCEQGQSKTAFVTFKDPKALEIALLLSGATIVDQIVRISPAENHVPKREMQEVRYVDSAAR
        +QSQ  TRTV+V HVSDLATEREIHEFFSFSGEIEHIEIQCEQG+SKTAFVTF DPKALEIALLLSGATIVD+IV I+PAENHVP+REMQEVR  D+AA 
Subjt:  MQSQIPTRTVRVNHVSDLATEREIHEFFSFSGEIEHIEIQCEQGQSKTAFVTFKDPKALEIALLLSGATIVDQIVRISPAENHVPKREMQEVRYVDSAAR

Query:  LTPTESNVPSIEDSASQPSSGKMYVNRAQEVVASVLAKGSEIGQDAMNKAKAFDEKHQLRASASAKVISFDRRVGLTEKLTVGISVVNEKVKSVDQRLHV
        LTPTE+N PSIEDSASQPSSGKMYVNRAQEVVA+VLAKGS IGQDAMNKAKAFDEKHQL ASASAKV+SFDRRVGLTEKLTVGISVVNEKVKSVDQ+LHV
Subjt:  LTPTESNVPSIEDSASQPSSGKMYVNRAQEVVASVLAKGSEIGQDAMNKAKAFDEKHQLRASASAKVISFDRRVGLTEKLTVGISVVNEKVKSVDQRLHV

Query:  SDKTMAAIFAAERKINDTGSAVKTSKYVTAGTAWLNGAFGKVTKAGQAAGSKTREKFHLAMSNLTSKEHSVVA
        SDKTMAAIFAAERK+NDTGSAVKTSKYVTA  AWLNGAFGKV KAGQAAG+KTREKFHLAMSNL SKE  VVA
Subjt:  SDKTMAAIFAAERKINDTGSAVKTSKYVTAGTAWLNGAFGKVTKAGQAAGSKTREKFHLAMSNLTSKEHSVVA

KAG7033660.1 Binding partner of ACD11 1 [Cucurbita argyrosperma subsp. argyrosperma]1.1e-12390.3Show/hide
Query:  MQSQIPTRTVRVNHVSDLATEREIHEFFSFSGEIEHIEIQCEQGQSKTAFVTFKDPKALEIALLLSGATIVDQIVRISPAENHVPKREMQEVRYVDSAAR
        MQSQ  TRTV+  +VSDLATEREIHEFFSFSGEIEH+EIQCEQGQSKTAFVTF+DPKALEIALLLSGATIVDQIV ISPAEN+VP+REMQEVR VD+AA 
Subjt:  MQSQIPTRTVRVNHVSDLATEREIHEFFSFSGEIEHIEIQCEQGQSKTAFVTFKDPKALEIALLLSGATIVDQIVRISPAENHVPKREMQEVRYVDSAAR

Query:  LTPTESNVPSIEDSASQPSSGKMYVNRAQEVVASVLAKGSEIGQDAMNKAKAFDEKHQLRASASAKVISFDRRVGLTEKLTVGISVVNEKVKSVDQRLHV
        LTPTE+N PSIEDSASQPSSG+MYVNRAQEVVASVLAKGS IGQDAMNKAKAFDEKHQL ASASAKV+SFDR+VGLTEKLTVGISVVNEKVKSVDQ+LHV
Subjt:  LTPTESNVPSIEDSASQPSSGKMYVNRAQEVVASVLAKGSEIGQDAMNKAKAFDEKHQLRASASAKVISFDRRVGLTEKLTVGISVVNEKVKSVDQRLHV

Query:  SDKTMAAIFAAERKINDTGSAVKTSKYVTAGTAWLNGAFGKVTKAGQAAGSKTREKFHLAMSNLTSKE
        SDKTMAAIFAAERKINDTGSAVKTSKYVT+G AWLNGAFGKV KAGQAAG+KTREKFHLAMSNLTSKE
Subjt:  SDKTMAAIFAAERKINDTGSAVKTSKYVTAGTAWLNGAFGKVTKAGQAAGSKTREKFHLAMSNLTSKE

XP_004151849.1 binding partner of ACD11 1 [Cucumis sativus]8.3e-12489.38Show/hide
Query:  MQSQIPTRTVRVNHVSDLATEREIHEFFSFSGEIEHIEIQCEQGQSKTAFVTFKDPKALEIALLLSGATIVDQIVRISPAENHVPKREMQEVRYVDSAAR
        MQSQ  TRTV+V HVSDLATEREIHEFFSFSGEIEHIEIQCEQG+SKTAFVTF DPKALEIALLLSGATIVD+IV I+PAENHVP+REMQEVR  D+AA 
Subjt:  MQSQIPTRTVRVNHVSDLATEREIHEFFSFSGEIEHIEIQCEQGQSKTAFVTFKDPKALEIALLLSGATIVDQIVRISPAENHVPKREMQEVRYVDSAAR

Query:  LTPTESNVPSIEDSASQPSSGKMYVNRAQEVVASVLAKGSEIGQDAMNKAKAFDEKHQLRASASAKVISFDRRVGLTEKLTVGISVVNEKVKSVDQRLHV
        LTPTE+N PSIEDSASQPSSGKMYVNRAQEVVA+VLAKGS IGQDAMNKAKAFDEKHQL ASASAKV+SFDRRVGLTEKLTVGISVVNEKVKSVDQ+LHV
Subjt:  LTPTESNVPSIEDSASQPSSGKMYVNRAQEVVASVLAKGSEIGQDAMNKAKAFDEKHQLRASASAKVISFDRRVGLTEKLTVGISVVNEKVKSVDQRLHV

Query:  SDKTMAAIFAAERKINDTGSAVKTSKYVTAGTAWLNGAFGKVTKAGQAAGSKTREKFHLAMSNLTSKEHSVVA
        SDKTMAAIFAAERK+NDTGSAVKTSKYVTA  AWLNGAFGKV KAGQAAG+KTREKFHLAMSNL SKE  VVA
Subjt:  SDKTMAAIFAAERKINDTGSAVKTSKYVTAGTAWLNGAFGKVTKAGQAAGSKTREKFHLAMSNLTSKEHSVVA

XP_022950330.1 binding partner of ACD11 1 [Cucurbita moschata]1.3e-12489.38Show/hide
Query:  MQSQIPTRTVRVNHVSDLATEREIHEFFSFSGEIEHIEIQCEQGQSKTAFVTFKDPKALEIALLLSGATIVDQIVRISPAENHVPKREMQEVRYVDSAAR
        MQSQ  TRTV+  +VSDLATEREIHEFFSFSGEIEH+EIQCEQGQSKTAFVTF+DPKALEIALLLSGATIVDQIV ISPAEN+VP+REMQEVR VD+AA 
Subjt:  MQSQIPTRTVRVNHVSDLATEREIHEFFSFSGEIEHIEIQCEQGQSKTAFVTFKDPKALEIALLLSGATIVDQIVRISPAENHVPKREMQEVRYVDSAAR

Query:  LTPTESNVPSIEDSASQPSSGKMYVNRAQEVVASVLAKGSEIGQDAMNKAKAFDEKHQLRASASAKVISFDRRVGLTEKLTVGISVVNEKVKSVDQRLHV
        LTPTE+N PSIEDSASQPSSG+MYVNRAQEVVASVLAKGS IGQDAMNKAKAFDEKHQL ASASAKV+SFDR+VGLTEKLTVGISVVNEKVKSVDQ+LHV
Subjt:  LTPTESNVPSIEDSASQPSSGKMYVNRAQEVVASVLAKGSEIGQDAMNKAKAFDEKHQLRASASAKVISFDRRVGLTEKLTVGISVVNEKVKSVDQRLHV

Query:  SDKTMAAIFAAERKINDTGSAVKTSKYVTAGTAWLNGAFGKVTKAGQAAGSKTREKFHLAMSNLTSKEHSVVA
        SDKTMAAIFAAERKINDTGSAVKTSKYVT+G AWLNGAFGKV KAGQAAG+KTREKFHLAMSNLTSK H V A
Subjt:  SDKTMAAIFAAERKINDTGSAVKTSKYVTAGTAWLNGAFGKVTKAGQAAGSKTREKFHLAMSNLTSKEHSVVA

XP_038881171.1 binding partner of ACD11 1-like isoform X2 [Benincasa hispida]3.4e-12590.84Show/hide
Query:  MQSQIPTRTVRVNHVSDLATEREIHEFFSFSGEIEHIEIQCEQGQSKTAFVTFKDPKALEIALLLSGATIVDQIVRISPAENHVPKREMQEVRYVDSAAR
        MQSQ  TRTV+V HVSDLATEREIHEFFSFSGEIEHIEIQCEQGQSKTAFVTF+DPKALEIALLLSGATIVDQIV IS AENHVP+REMQEVR VD+AA 
Subjt:  MQSQIPTRTVRVNHVSDLATEREIHEFFSFSGEIEHIEIQCEQGQSKTAFVTFKDPKALEIALLLSGATIVDQIVRISPAENHVPKREMQEVRYVDSAAR

Query:  LTPTESNVPSIEDSASQPSSGKMYVNRAQEVVASVLAKGSEIGQDAMNKAKAFDEKHQLRASASAKVISFDRRVGLTEKLTVGISVVNEKVKSVDQRLHV
        LTPTE+N PS EDSASQPSSGKMYVNRAQ VVA+VLAKGS IGQDAMNKAKAFDEKHQL ASASAKV+SFDRRVGLTEKLTVGISVVNEKVKSVDQ LHV
Subjt:  LTPTESNVPSIEDSASQPSSGKMYVNRAQEVVASVLAKGSEIGQDAMNKAKAFDEKHQLRASASAKVISFDRRVGLTEKLTVGISVVNEKVKSVDQRLHV

Query:  SDKTMAAIFAAERKINDTGSAVKTSKYVTAGTAWLNGAFGKVTKAGQAAGSKTREKFHLAMSNLTSKEHSVVA
        SDKTMAAIFAAERK+NDTGSAVKTSKYVTAG AWLNGAFGKV KAGQAAG+KTREKFHLAMSNLTSKE SVVA
Subjt:  SDKTMAAIFAAERKINDTGSAVKTSKYVTAGTAWLNGAFGKVTKAGQAAGSKTREKFHLAMSNLTSKEHSVVA

TrEMBL top hitse value%identityAlignment
A0A0A0LNE8 RRM domain-containing protein4.0e-12489.38Show/hide
Query:  MQSQIPTRTVRVNHVSDLATEREIHEFFSFSGEIEHIEIQCEQGQSKTAFVTFKDPKALEIALLLSGATIVDQIVRISPAENHVPKREMQEVRYVDSAAR
        MQSQ  TRTV+V HVSDLATEREIHEFFSFSGEIEHIEIQCEQG+SKTAFVTF DPKALEIALLLSGATIVD+IV I+PAENHVP+REMQEVR  D+AA 
Subjt:  MQSQIPTRTVRVNHVSDLATEREIHEFFSFSGEIEHIEIQCEQGQSKTAFVTFKDPKALEIALLLSGATIVDQIVRISPAENHVPKREMQEVRYVDSAAR

Query:  LTPTESNVPSIEDSASQPSSGKMYVNRAQEVVASVLAKGSEIGQDAMNKAKAFDEKHQLRASASAKVISFDRRVGLTEKLTVGISVVNEKVKSVDQRLHV
        LTPTE+N PSIEDSASQPSSGKMYVNRAQEVVA+VLAKGS IGQDAMNKAKAFDEKHQL ASASAKV+SFDRRVGLTEKLTVGISVVNEKVKSVDQ+LHV
Subjt:  LTPTESNVPSIEDSASQPSSGKMYVNRAQEVVASVLAKGSEIGQDAMNKAKAFDEKHQLRASASAKVISFDRRVGLTEKLTVGISVVNEKVKSVDQRLHV

Query:  SDKTMAAIFAAERKINDTGSAVKTSKYVTAGTAWLNGAFGKVTKAGQAAGSKTREKFHLAMSNLTSKEHSVVA
        SDKTMAAIFAAERK+NDTGSAVKTSKYVTA  AWLNGAFGKV KAGQAAG+KTREKFHLAMSNL SKE  VVA
Subjt:  SDKTMAAIFAAERKINDTGSAVKTSKYVTAGTAWLNGAFGKVTKAGQAAGSKTREKFHLAMSNLTSKEHSVVA

A0A5D3BPG7 Binding partner of ACD11 1-like7.6e-12388.64Show/hide
Query:  MQSQIPTRTVRVNHVSDLATEREIHEFFSFSGEIEHIEIQCEQGQSKTAFVTFKDPKALEIALLLSGATIVDQIVRISPAENHVPKREMQEVRYVDSAAR
        MQSQ  TRTV+V HVSDLATEREIHEFFSFSGEIEHIEIQCEQG+SKTAFVTF DPKALEIALLLSGATIVD+IV I+PAENHVP+RE+QEVR  D+AA 
Subjt:  MQSQIPTRTVRVNHVSDLATEREIHEFFSFSGEIEHIEIQCEQGQSKTAFVTFKDPKALEIALLLSGATIVDQIVRISPAENHVPKREMQEVRYVDSAAR

Query:  LTPTESNVPSIEDSASQPSSGKMYVNRAQEVVASVLAKGSEIGQDAMNKAKAFDEKHQLRASASAKVISFDRRVGLTEKLTVGISVVNEKVKSVDQRLHV
        LTPTE+N PS EDSASQPSSGKMYVNRAQEVVA+VLAKGS IGQDAMNKAKAFDEKHQL ASASAKV+SFDRRVGLTEKLTVGISVVNEKVKSVDQ+LHV
Subjt:  LTPTESNVPSIEDSASQPSSGKMYVNRAQEVVASVLAKGSEIGQDAMNKAKAFDEKHQLRASASAKVISFDRRVGLTEKLTVGISVVNEKVKSVDQRLHV

Query:  SDKTMAAIFAAERKINDTGSAVKTSKYVTAGTAWLNGAFGKVTKAGQAAGSKTREKFHLAMSNLTSKEHSVVA
        SDKTMAAIFAAERK+NDTGSAVKTSKYVTA  AWLNGAFGKV KAGQAAG+KTREKFHLAMSNL SKE  VVA
Subjt:  SDKTMAAIFAAERKINDTGSAVKTSKYVTAGTAWLNGAFGKVTKAGQAAGSKTREKFHLAMSNLTSKEHSVVA

A0A6J1DJX5 binding partner of ACD11 11.5e-12390.11Show/hide
Query:  MQSQIPTRTVRVNHVSDLATEREIHEFFSFSGEIEHIEIQCEQGQSKTAFVTFKDPKALEIALLLSGATIVDQIVRISPAENHVPKREMQEVRYVDSAAR
        MQS+  TRTV+VNHVSDLATEREIHEFFSFSGEIEHIEIQCE GQSKTAFVTF+DPKALEIALLLSGATIVDQIV ISPAENHVPKRE+QEVR VD+AA 
Subjt:  MQSQIPTRTVRVNHVSDLATEREIHEFFSFSGEIEHIEIQCEQGQSKTAFVTFKDPKALEIALLLSGATIVDQIVRISPAENHVPKREMQEVRYVDSAAR

Query:  LTPTESNVPSIEDSASQPSSGKMYVNRAQEVVASVLAKGSEIGQDAMNKAKAFDEKHQLRASASAKVISFDRRVGLTEKLTVGISVVNEKVKSVDQRLHV
        LT TE+N+PS EDSASQPS G+MYVNRAQEVVASVLAKGS IGQDAMNKAKAFDEKH+L ASAS KV+SFDRRVGLTEKLTVGISVVNEKVKSVDQRLHV
Subjt:  LTPTESNVPSIEDSASQPSSGKMYVNRAQEVVASVLAKGSEIGQDAMNKAKAFDEKHQLRASASAKVISFDRRVGLTEKLTVGISVVNEKVKSVDQRLHV

Query:  SDKTMAAIFAAERKINDTGSAVKTSKYVTAGTAWLNGAFGKVTKAGQAAGSKTREKFHLAMSNLTSKEHSVVA
        SDKTMAAIFAAERK+NDTGSAVKTSKYVTAG AWLNGAFGKV KAGQAAGSKTREKFHLAMSNLTSKE  VVA
Subjt:  SDKTMAAIFAAERKINDTGSAVKTSKYVTAGTAWLNGAFGKVTKAGQAAGSKTREKFHLAMSNLTSKEHSVVA

A0A6J1GFF4 binding partner of ACD11 16.2e-12589.38Show/hide
Query:  MQSQIPTRTVRVNHVSDLATEREIHEFFSFSGEIEHIEIQCEQGQSKTAFVTFKDPKALEIALLLSGATIVDQIVRISPAENHVPKREMQEVRYVDSAAR
        MQSQ  TRTV+  +VSDLATEREIHEFFSFSGEIEH+EIQCEQGQSKTAFVTF+DPKALEIALLLSGATIVDQIV ISPAEN+VP+REMQEVR VD+AA 
Subjt:  MQSQIPTRTVRVNHVSDLATEREIHEFFSFSGEIEHIEIQCEQGQSKTAFVTFKDPKALEIALLLSGATIVDQIVRISPAENHVPKREMQEVRYVDSAAR

Query:  LTPTESNVPSIEDSASQPSSGKMYVNRAQEVVASVLAKGSEIGQDAMNKAKAFDEKHQLRASASAKVISFDRRVGLTEKLTVGISVVNEKVKSVDQRLHV
        LTPTE+N PSIEDSASQPSSG+MYVNRAQEVVASVLAKGS IGQDAMNKAKAFDEKHQL ASASAKV+SFDR+VGLTEKLTVGISVVNEKVKSVDQ+LHV
Subjt:  LTPTESNVPSIEDSASQPSSGKMYVNRAQEVVASVLAKGSEIGQDAMNKAKAFDEKHQLRASASAKVISFDRRVGLTEKLTVGISVVNEKVKSVDQRLHV

Query:  SDKTMAAIFAAERKINDTGSAVKTSKYVTAGTAWLNGAFGKVTKAGQAAGSKTREKFHLAMSNLTSKEHSVVA
        SDKTMAAIFAAERKINDTGSAVKTSKYVT+G AWLNGAFGKV KAGQAAG+KTREKFHLAMSNLTSK H V A
Subjt:  SDKTMAAIFAAERKINDTGSAVKTSKYVTAGTAWLNGAFGKVTKAGQAAGSKTREKFHLAMSNLTSKEHSVVA

A0A6J1IKN1 binding partner of ACD11 16.2e-12589.38Show/hide
Query:  MQSQIPTRTVRVNHVSDLATEREIHEFFSFSGEIEHIEIQCEQGQSKTAFVTFKDPKALEIALLLSGATIVDQIVRISPAENHVPKREMQEVRYVDSAAR
        MQSQ  TRTV+  +VSDLATEREIHEFFSFSGEIEH+EIQCEQGQSKTAFVTF+DPKALEIALLLSGATIVDQIV ISPAEN+VP+REMQEVR VD+AA 
Subjt:  MQSQIPTRTVRVNHVSDLATEREIHEFFSFSGEIEHIEIQCEQGQSKTAFVTFKDPKALEIALLLSGATIVDQIVRISPAENHVPKREMQEVRYVDSAAR

Query:  LTPTESNVPSIEDSASQPSSGKMYVNRAQEVVASVLAKGSEIGQDAMNKAKAFDEKHQLRASASAKVISFDRRVGLTEKLTVGISVVNEKVKSVDQRLHV
        LTPTE+N PSIEDSASQPSSG+MYVNRAQEVVASVLAKGS IGQDAMNKAKAFDEKHQL ASASAKV+SFDR+VGLTEKLTVGISVVNEKVKSVDQ+LHV
Subjt:  LTPTESNVPSIEDSASQPSSGKMYVNRAQEVVASVLAKGSEIGQDAMNKAKAFDEKHQLRASASAKVISFDRRVGLTEKLTVGISVVNEKVKSVDQRLHV

Query:  SDKTMAAIFAAERKINDTGSAVKTSKYVTAGTAWLNGAFGKVTKAGQAAGSKTREKFHLAMSNLTSKEHSVVA
        SDKTMAAIFAAERKINDTGSAVKTSKYVT+G AWLNGAFGKV KAGQAAG+KTREKFHLAMSNLTSK H V A
Subjt:  SDKTMAAIFAAERKINDTGSAVKTSKYVTAGTAWLNGAFGKVTKAGQAAGSKTREKFHLAMSNLTSKEHSVVA

SwissProt top hitse value%identityAlignment
P87216 Protein vip11.5e-0624Show/hide
Query:  VRVNHVSDLATEREIHEFFSFSGEIEHIEIQCEQGQSKTAFVTFKDPKALEIALLLSGATIVDQIVRISPAENHVPKREMQEVRYVDSAARLTPTESNVP
        V V ++S   TE++I +FFSF G++ +I  + + G+++TA + F+ P A + ALLL  A +    ++I+  +        Q     D AAR         
Subjt:  VRVNHVSDLATEREIHEFFSFSGEIEHIEIQCEQGQSKTAFVTFKDPKALEIALLLSGATIVDQIVRISPAENHVPKREMQEVRYVDSAARLTPTESNVP

Query:  SIEDSASQPSSGKMYVNRAQEVVASVLAKGSEIGQDAMNKAKAFDEKHQLRASASAKVISFDRRVGLTEKLTVGISVVNEKVKSVDQRLHVSDKT--MAA
               +P S          +++ +L++G  +    + K+                 I  D+  G++ K    +      V+SV++R HV++K   +  
Subjt:  SIEDSASQPSSGKMYVNRAQEVVASVLAKGSEIGQDAMNKAKAFDEKHQLRASASAKVISFDRRVGLTEKLTVGISVVNEKVKSVDQRLHVSDKT--MAA

Query:  IFAAERKINDTGSAVKTSKYVTAGTAWLNGAFGKVTKAGQAAGSKTREKF
         FA   K+N T S V T  +    TA           AG +AG K +  +
Subjt:  IFAAERKINDTGSAVKTSKYVTAGTAWLNGAFGKVTKAGQAAGSKTREKF

Q9LFD5 Binding partner of ACD11 11.5e-4642.97Show/hide
Query:  MQSQIPTRTVRVNHVSDLATEREIHEFFSFSGEIEHIEIQCEQGQSKTAFVTFKDPKALEIALLLSGATIVDQIVRISPAENHVPKREMQEVRYVDSAAR
        M SQ+  R+V+V ++S  ATE +I EFFSFSGE+E I+IQ  +    +A+VTFK+ +  E A+LLSGA+I DQ V I  A N+ P               
Subjt:  MQSQIPTRTVRVNHVSDLATEREIHEFFSFSGEIEHIEIQCEQGQSKTAFVTFKDPKALEIALLLSGATIVDQIVRISPAENHVPKREMQEVRYVDSAAR

Query:  LTPTESNVPSIEDSASQPSSGKMYVNRAQEVVASVLAKGSEIGQDAMNKAKAFDEKHQLRASASAKVISFDRRVGLTEKLTVGISVVNEKVKSVDQRLHV
                P+   + +Q S  +  V +A++VV+S+LAKG  +G+DA+ KAKAFDEKH   ++A+A V S D+++GL++KLT G S+VNEK+K+VDQ   V
Subjt:  LTPTESNVPSIEDSASQPSSGKMYVNRAQEVVASVLAKGSEIGQDAMNKAKAFDEKHQLRASASAKVISFDRRVGLTEKLTVGISVVNEKVKSVDQRLHV

Query:  SDKTMAAIFAAERKINDTGSAVKTSKYVTAGTAWLNGAFGKVTKAGQAAGSKTREK
        +++T +   AAE+ ++  GSAV  ++YV  G +W  GAF +V +A    G KT+EK
Subjt:  SDKTMAAIFAAERKINDTGSAVKTSKYVTAGTAWLNGAFGKVTKAGQAAGSKTREK

Arabidopsis top hitse value%identityAlignment
AT4G17720.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.1e-5246.03Show/hide
Query:  TVRVNHVSDLATEREIHEFFSFSGEIEHIEIQCEQGQSKTAFVTFKDPKALEIALLLSGATIVDQIVRISPAENHVPKREMQEVRYVDSAARLTPTESNV
        TV+V++VS  AT+R++ EFFSFSG+I ++E Q E  ++K A+VTFKD +  E A+LLSGATIVD  V +S A ++    E        + A L P +SN 
Subjt:  TVRVNHVSDLATEREIHEFFSFSGEIEHIEIQCEQGQSKTAFVTFKDPKALEIALLLSGATIVDQIVRISPAENHVPKREMQEVRYVDSAARLTPTESNV

Query:  PSIEDSASQPSSGKMYVNRAQEVVASVLAKGSEIGQDAMNKAKAFDEKHQLRASASAKVISFDRRVGLTEKLTVGISVVNEKVKSVDQRLHVSDKTMAAI
                 P +G   + +A++VV+S+LAKG  +G+DA+ KAK+ DEKHQL ++ASAKV SFD+++G T+K+  G  VV EKV+ VDQ+  VS+KT +AI
Subjt:  PSIEDSASQPSSGKMYVNRAQEVVASVLAKGSEIGQDAMNKAKAFDEKHQLRASASAKVISFDRRVGLTEKLTVGISVVNEKVKSVDQRLHVSDKTMAAI

Query:  FAAERKINDTGSAVKTSKYVTAGTAWLNGAFGKVTKAGQAAGSKTREKFHLA
         AAE+ +++ GSA+  ++YV  G  W+ GAF KV KA +  G K +EK  +A
Subjt:  FAAERKINDTGSAVKTSKYVTAGTAWLNGAFGKVTKAGQAAGSKTREKFHLA

AT5G16840.1 binding partner of acd11 11.0e-4742.97Show/hide
Query:  MQSQIPTRTVRVNHVSDLATEREIHEFFSFSGEIEHIEIQCEQGQSKTAFVTFKDPKALEIALLLSGATIVDQIVRISPAENHVPKREMQEVRYVDSAAR
        M SQ+  R+V+V ++S  ATE +I EFFSFSGE+E I+IQ  +    +A+VTFK+ +  E A+LLSGA+I DQ V I  A N+ P               
Subjt:  MQSQIPTRTVRVNHVSDLATEREIHEFFSFSGEIEHIEIQCEQGQSKTAFVTFKDPKALEIALLLSGATIVDQIVRISPAENHVPKREMQEVRYVDSAAR

Query:  LTPTESNVPSIEDSASQPSSGKMYVNRAQEVVASVLAKGSEIGQDAMNKAKAFDEKHQLRASASAKVISFDRRVGLTEKLTVGISVVNEKVKSVDQRLHV
                P+   + +Q S  +  V +A++VV+S+LAKG  +G+DA+ KAKAFDEKH   ++A+A V S D+++GL++KLT G S+VNEK+K+VDQ   V
Subjt:  LTPTESNVPSIEDSASQPSSGKMYVNRAQEVVASVLAKGSEIGQDAMNKAKAFDEKHQLRASASAKVISFDRRVGLTEKLTVGISVVNEKVKSVDQRLHV

Query:  SDKTMAAIFAAERKINDTGSAVKTSKYVTAGTAWLNGAFGKVTKAGQAAGSKTREK
        +++T +   AAE+ ++  GSAV  ++YV  G +W  GAF +V +A    G KT+EK
Subjt:  SDKTMAAIFAAERKINDTGSAVKTSKYVTAGTAWLNGAFGKVTKAGQAAGSKTREK

AT5G16840.2 binding partner of acd11 17.9e-4843.36Show/hide
Query:  MQSQIPTRTVRVNHVSDLATEREIHEFFSFSGEIEHIEIQCEQGQSKTAFVTFKDPKALEIALLLSGATIVDQIVRISPAENHVPKREMQEVRYVDSAAR
        M SQ+  R+V+V ++S  ATE +I EFFSFSGE+E I+IQ     S  A+VTFK+ +  E A+LLSGA+I DQ V I  A N+ P               
Subjt:  MQSQIPTRTVRVNHVSDLATEREIHEFFSFSGEIEHIEIQCEQGQSKTAFVTFKDPKALEIALLLSGATIVDQIVRISPAENHVPKREMQEVRYVDSAAR

Query:  LTPTESNVPSIEDSASQPSSGKMYVNRAQEVVASVLAKGSEIGQDAMNKAKAFDEKHQLRASASAKVISFDRRVGLTEKLTVGISVVNEKVKSVDQRLHV
                P+   + +Q S  +  V +A++VV+S+LAKG  +G+DA+ KAKAFDEKH   ++A+A V S D+++GL++KLT G S+VNEK+K+VDQ   V
Subjt:  LTPTESNVPSIEDSASQPSSGKMYVNRAQEVVASVLAKGSEIGQDAMNKAKAFDEKHQLRASASAKVISFDRRVGLTEKLTVGISVVNEKVKSVDQRLHV

Query:  SDKTMAAIFAAERKINDTGSAVKTSKYVTAGTAWLNGAFGKVTKAGQAAGSKTREK
        +++T +   AAE+ ++  GSAV  ++YV  G +W  GAF +V +A    G KT+EK
Subjt:  SDKTMAAIFAAERKINDTGSAVKTSKYVTAGTAWLNGAFGKVTKAGQAAGSKTREK

AT5G32450.1 RNA binding (RRM/RBD/RNP motifs) family protein2.4e-9772.52Show/hide
Query:  TRTVRVNHVSDLATEREIHEFFSFSGEIEHIEIQCEQGQSKTAFVTFKDPKALEIALLLSGATIVDQIVRISPAENHVPKREMQEVRYVDSAARLTPTES
        TR+V+VN+VSDLATEREIHEFFSFSG+IEHIEIQ E GQS+ AFVTF DPKALEIALLLSGATIVDQIV I+ AEN+V +RE QEVR +D+A  L   ES
Subjt:  TRTVRVNHVSDLATEREIHEFFSFSGEIEHIEIQCEQGQSKTAFVTFKDPKALEIALLLSGATIVDQIVRISPAENHVPKREMQEVRYVDSAARLTPTES

Query:  NVPSIEDSASQPSSGKMYVNRAQEVVASVLAKGSEIGQDAMNKAKAFDEKHQLRASASAKVISFDRRVGLTEKLTVGISVVNEKVKSVDQRLHVSDKTMA
           + +   +   + + YV++AQ+VVA+VLAKGS +GQDA+NKAKAFDEKHQLRA+ASAKV SFD+RVGLTEKL+VGIS VNEKVKSVDQ+L VSDKTMA
Subjt:  NVPSIEDSASQPSSGKMYVNRAQEVVASVLAKGSEIGQDAMNKAKAFDEKHQLRASASAKVISFDRRVGLTEKLTVGISVVNEKVKSVDQRLHVSDKTMA

Query:  AIFAAERKINDTGSAVKTSKYVTAGTAWLNGAFGKVTKAGQAAGSKTREKFHLAMSNLTSKE
        AIFAAERK+NDTGSAVK+S+YVTAG AW +GAF KV + GQ AGSKT+EKF+LA+SN++SK+
Subjt:  AIFAAERKINDTGSAVKTSKYVTAGTAWLNGAFGKVTKAGQAAGSKTREKFHLAMSNLTSKE

AT5G46870.1 RNA-binding (RRM/RBD/RNP motifs) family protein2.2e-5042.05Show/hide
Query:  TVRVNHVSDLATEREIHEFFSFSGEIEHIEIQCEQGQSKTAFVTFKDPKALEIALLLSGATIVDQIVRISPAENH-VPKREMQEVRYVDSAARLTPTESN
        TV+V++VS  ATER++ EFFSFSG+I ++E Q E   SK A+VTFKD +  E A+LL+G+TIVD  V ++ + ++ +P   +  +  +  +      +S+
Subjt:  TVRVNHVSDLATEREIHEFFSFSGEIEHIEIQCEQGQSKTAFVTFKDPKALEIALLLSGATIVDQIVRISPAENH-VPKREMQEVRYVDSAARLTPTESN

Query:  VPSIEDSASQPSSGKMYVNRAQEVVASVLAKGSEIGQDAMNKAKAFDEKHQLRASASAKVISFDRRVGLTEKLTVGISVVNEKVKSVDQRLHVSDKTMAA
         P+ ED +           +A++VV+ +++KG  +G+DA+ KAK+ DEKHQL ++ASA+V SFD+R+G TEK+  G +VV+EKVK VDQ+  V++KT +A
Subjt:  VPSIEDSASQPSSGKMYVNRAQEVVASVLAKGSEIGQDAMNKAKAFDEKHQLRASASAKVISFDRRVGLTEKLTVGISVVNEKVKSVDQRLHVSDKTMAA

Query:  IFAAERKINDTGSAVKTSKYVTAGTAWLNGAFGKVTKAGQAAGSKTREKFHLAMSNLTSKEHSV
        I AAE+ +++ GSA+  ++YV  G  W+ GAF +V+KA +  G K +EK  LA      K+  V
Subjt:  IFAAERKINDTGSAVKTSKYVTAGTAWLNGAFGKVTKAGQAAGSKTREKFHLAMSNLTSKEHSV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGTCTCAGATTCCGACGCGGACGGTTCGAGTAAATCACGTTTCGGATCTAGCTACGGAGAGGGAGATTCACGAGTTCTTCTCATTTTCTGGAGAAATTGAGCACAT
AGAGATCCAATGTGAACAGGGGCAATCAAAGACTGCGTTCGTGACATTTAAAGATCCGAAAGCTCTTGAAATTGCATTATTGTTATCGGGAGCAACTATTGTAGATCAGA
TTGTCCGCATATCTCCTGCTGAAAATCATGTACCAAAAAGAGAAATGCAGGAAGTACGGTATGTGGACAGTGCTGCACGTCTCACTCCTACAGAAAGTAATGTGCCTAGC
ATTGAGGATTCTGCAAGCCAGCCTAGCAGTGGAAAAATGTATGTTAACCGAGCGCAAGAAGTAGTTGCAAGTGTGCTTGCTAAGGGTTCTGAAATTGGACAAGATGCCAT
GAACAAGGCAAAAGCATTTGACGAAAAACATCAGTTAAGAGCAAGTGCGTCTGCAAAGGTAATATCCTTTGACAGAAGGGTTGGGCTCACAGAGAAATTGACAGTTGGGA
TTTCAGTGGTTAACGAGAAAGTCAAGTCTGTAGATCAAAGGCTTCATGTTTCGGATAAAACAATGGCTGCAATCTTTGCTGCTGAGAGAAAGATCAACGACACAGGATCT
GCTGTCAAAACAAGCAAGTATGTGACGGCAGGCACTGCTTGGCTAAATGGTGCTTTTGGCAAGGTCACAAAAGCAGGGCAGGCTGCAGGCTCAAAAACAAGAGAGAAATT
CCATTTGGCTATGTCAAACTTGACTTCGAAGGAACATTCAGTTGTTGCCTAA
mRNA sequenceShow/hide mRNA sequence
ATCTCTCCCAAGCTTTGTCTGGTGAAAACTCCTTTCAAATTGCCTCAGAGCTCCAACCTGTACAACTTCTCTCTACTTTCTCTCTCTACAAGAAATCGCCGAATTCTCCG
ATTCTTAGCTATGCAGTCTCAGATTCCGACGCGGACGGTTCGAGTAAATCACGTTTCGGATCTAGCTACGGAGAGGGAGATTCACGAGTTCTTCTCATTTTCTGGAGAAA
TTGAGCACATAGAGATCCAATGTGAACAGGGGCAATCAAAGACTGCGTTCGTGACATTTAAAGATCCGAAAGCTCTTGAAATTGCATTATTGTTATCGGGAGCAACTATT
GTAGATCAGATTGTCCGCATATCTCCTGCTGAAAATCATGTACCAAAAAGAGAAATGCAGGAAGTACGGTATGTGGACAGTGCTGCACGTCTCACTCCTACAGAAAGTAA
TGTGCCTAGCATTGAGGATTCTGCAAGCCAGCCTAGCAGTGGAAAAATGTATGTTAACCGAGCGCAAGAAGTAGTTGCAAGTGTGCTTGCTAAGGGTTCTGAAATTGGAC
AAGATGCCATGAACAAGGCAAAAGCATTTGACGAAAAACATCAGTTAAGAGCAAGTGCGTCTGCAAAGGTAATATCCTTTGACAGAAGGGTTGGGCTCACAGAGAAATTG
ACAGTTGGGATTTCAGTGGTTAACGAGAAAGTCAAGTCTGTAGATCAAAGGCTTCATGTTTCGGATAAAACAATGGCTGCAATCTTTGCTGCTGAGAGAAAGATCAACGA
CACAGGATCTGCTGTCAAAACAAGCAAGTATGTGACGGCAGGCACTGCTTGGCTAAATGGTGCTTTTGGCAAGGTCACAAAAGCAGGGCAGGCTGCAGGCTCAAAAACAA
GAGAGAAATTCCATTTGGCTATGTCAAACTTGACTTCGAAGGAACATTCAGTTGTTGCCTAAGCTTAAAAACTTAGGCTTCACGAAAGTCACTTGGCTTGGCTACTCGTA
TTTTGTCAATGGGGGATTGAAATTAGTGTCTTAAATTTCATTTTCTTCAAGTTACTTAATCTTGAGAACTATGCTCTATTGTTTGTTTGCCTTTTTTTTTTTTTATAGTT
TTTTTATATTTTTTATATTCTTTAATTACAAGGGTGTTTGATTGACGACAATTTTGCATCTGTAAGATTGGTTATGAAAGTGTAAAGAGCAAGTCCATTTGTGGTTTGTC
TTATTATTTGTTTAGGAGTATCAAGTTTGTGGCTCAGCTTGTTTCTTGCTGACATTTTGGCTCTTCTTGCCTGTGTTTTATTTATTTATTTATTATTGTTTTCGACCTCA
G
Protein sequenceShow/hide protein sequence
MQSQIPTRTVRVNHVSDLATEREIHEFFSFSGEIEHIEIQCEQGQSKTAFVTFKDPKALEIALLLSGATIVDQIVRISPAENHVPKREMQEVRYVDSAARLTPTESNVPS
IEDSASQPSSGKMYVNRAQEVVASVLAKGSEIGQDAMNKAKAFDEKHQLRASASAKVISFDRRVGLTEKLTVGISVVNEKVKSVDQRLHVSDKTMAAIFAAERKINDTGS
AVKTSKYVTAGTAWLNGAFGKVTKAGQAAGSKTREKFHLAMSNLTSKEHSVVA