| GenBank top hits | e value | %identity | Alignment |
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| KAG6593155.1 U1 small nuclear ribonucleoprotein C, partial [Cucurbita argyrosperma subsp. sororia] | 1.7e-87 | 89.23 | Show/hide |
Query: RYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGVAYNQHLLGQRPRLPVLPTPLMPGGAPGLLPGIR
RYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVG AYNQHLLGQRPRLPVLPTP+MPGG PGL+PGIR
Subjt: RYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGVAYNQHLLGQRPRLPVLPTPLMPGGAPGLLPGIR
Query: PPVFPRPVPGAPGYLPAHMMPPMMAPPGAPMPGQVNVPARPPPPAPIPGNTPQPSSTSG----APPMYQANPAAPGSGGYDNLTTMAQAQPSESN
PPVFPRPVPGAPGYLP MPPMMAPPGA MPGQVNVP+RPPPPAPIPG+TPQPSST+G AP YQANPAAPGSGGYD+ TTM AQPSESN
Subjt: PPVFPRPVPGAPGYLPAHMMPPMMAPPGAPMPGQVNVPARPPPPAPIPGNTPQPSSTSG----APPMYQANPAAPGSGGYDNLTTMAQAQPSESN
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| XP_022959935.1 U1 small nuclear ribonucleoprotein C [Cucurbita moschata] | 1.9e-86 | 88.72 | Show/hide |
Query: RYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGVAYNQHLLGQRPRLPVLPTPLMPGGAPGLLPGIR
RYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVG AYNQHLLGQRPRLPVLPTP+MPGGAPGL+PGIR
Subjt: RYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGVAYNQHLLGQRPRLPVLPTPLMPGGAPGLLPGIR
Query: PPVFPRPVPGAPGYLPAHMMPPMMAPPGAPMPGQVNVPARPPPPAPIPGNTPQPSSTSG----APPMYQANPAAPGSGGYDNLTTMAQAQPSESN
PPVFPRP+PGAPGYLP MPPMMAPPGA MPGQVNVP+RPPPPAPIPG+TPQ SST+G AP YQANPAAPGSGGYD+ TTM AQPSESN
Subjt: PPVFPRPVPGAPGYLPAHMMPPMMAPPGAPMPGQVNVPARPPPPAPIPGNTPQPSSTSG----APPMYQANPAAPGSGGYDNLTTMAQAQPSESN
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| XP_023004664.1 U1 small nuclear ribonucleoprotein C [Cucurbita maxima] | 5.9e-88 | 89.74 | Show/hide |
Query: RYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGVAYNQHLLGQRPRLPVLPTPLMPGGAPGLLPGIR
RYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVG AYNQHLLGQRPRLPVLPTP+MPGGAPGL+PGIR
Subjt: RYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGVAYNQHLLGQRPRLPVLPTPLMPGGAPGLLPGIR
Query: PPVFPRPVPGAPGYLPAHMMPPMMAPPGAPMPGQVNVPARPPPPAPIPGNTPQPSSTSG----APPMYQANPAAPGSGGYDNLTTMAQAQPSESN
PPVFPRPVPGAPGYLP MPPMMAPPGA MPGQVNVP+RPPPPAPIPG+T QPSST+G APP YQANPAAPGSGGYD+ TTM AQPSESN
Subjt: PPVFPRPVPGAPGYLPAHMMPPMMAPPGAPMPGQVNVPARPPPPAPIPGNTPQPSSTSG----APPMYQANPAAPGSGGYDNLTTMAQAQPSESN
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| XP_023515032.1 U1 small nuclear ribonucleoprotein C [Cucurbita pepo subsp. pepo] | 1.5e-86 | 88.21 | Show/hide |
Query: RYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGVAYNQHLLGQRPRLPVLPTPLMPGGAPGLLPGIR
RYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVG AYNQHLLGQRPRLPVLPTP+MPGGAPGL+PGIR
Subjt: RYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGVAYNQHLLGQRPRLPVLPTPLMPGGAPGLLPGIR
Query: PPVFPRPVPGAPGYLPAHMMPPMMAPPGAPMPGQVNVPARPPPPAPIPGNTPQPSSTSG----APPMYQANPAAPGSGGYDNLTTMAQAQPSESN
PPVFPRP+PGAPGYLP MPPMMAPPGA MPGQVN+P+RPPPPAPIPG+T QPSST+G AP YQANPAAPGSGGYD+ TTM AQPSESN
Subjt: PPVFPRPVPGAPGYLPAHMMPPMMAPPGAPMPGQVNVPARPPPPAPIPGNTPQPSSTSG----APPMYQANPAAPGSGGYDNLTTMAQAQPSESN
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| XP_038899936.1 U1 small nuclear ribonucleoprotein C isoform X1 [Benincasa hispida] | 1.6e-88 | 88.27 | Show/hide |
Query: RYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGVAYNQHLLGQRPRLPVLPTPLMPGGAPGLLPGIR
RYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVG AYNQHLLGQRPRLPVLPTP+MPG APGL+PGIR
Subjt: RYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGVAYNQHLLGQRPRLPVLPTPLMPGGAPGLLPGIR
Query: PPVFPRPVPGAPGYLPAHMMPPMMAPPGAPMPGQVNVPARPPPPAPIPGNTPQPSSTSGA----PPMYQANPAAPGSGGYDNLTTMAQAQPSESNH
PPV PRPVPGAPGYLPA MPPMMAPPGAPMPGQVN+PARPPPPAP+PG+ PQPSST+GA P MYQANPAAPGSGGY++ TTM AQPSE NH
Subjt: PPVFPRPVPGAPGYLPAHMMPPMMAPPGAPMPGQVNVPARPPPPAPIPGNTPQPSSTSGA----PPMYQANPAAPGSGGYDNLTTMAQAQPSESNH
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0A0K515 U1 small nuclear ribonucleoprotein C | 6.0e-86 | 85.2 | Show/hide |
Query: RYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGVAYNQHLLGQRPRLPVLPTPLMPGGAPGLLPGIR
RYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVG A+NQHLLGQRPRLPVLPTP+MPG APGL+PGIR
Subjt: RYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGVAYNQHLLGQRPRLPVLPTPLMPGGAPGLLPGIR
Query: PPVFPRPVPGAPGYLPAHMMPPMMAPPGAPMPGQVNVPARPPPPAPIPGNTPQPSSTSG----APPMYQANPAAPGSGGYDNLTTMAQAQPSESNH
PPV PRP+PGAPGYLP MPPMMAPPGAP+PGQVN+P+RPPPPAP+PG+ PQPSST+G AP YQANPAAPGSGGYD+ T+MAQ SESNH
Subjt: PPVFPRPVPGAPGYLPAHMMPPMMAPPGAPMPGQVNVPARPPPPAPIPGNTPQPSSTSG----APPMYQANPAAPGSGGYDNLTTMAQAQPSESNH
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| A0A1S3BS92 U1 small nuclear ribonucleoprotein C | 1.0e-85 | 85.2 | Show/hide |
Query: RYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGVAYNQHLLGQRPRLPVLPTPLMPGGAPGLLPGIR
RYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVG A+NQHLLGQRPRLPVLPTP++PG APGL+PGIR
Subjt: RYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGVAYNQHLLGQRPRLPVLPTPLMPGGAPGLLPGIR
Query: PPVFPRPVPGAPGYLPAHMMPPMMAPPGAPMPGQVNVPARPPPPAPIPGNTPQPSSTSG----APPMYQANPAAPGSGGYDNLTTMAQAQPSESNH
PPV PRP+PGAPGYLP MPPMMAPPGAP+PGQVN+P+RPPPPAPIPG+ PQPSST+G AP YQANPAAPGSGGYD+ T+MAQ SESNH
Subjt: PPVFPRPVPGAPGYLPAHMMPPMMAPPGAPMPGQVNVPARPPPPAPIPGNTPQPSSTSG----APPMYQANPAAPGSGGYDNLTTMAQAQPSESNH
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| A0A5A7UNW2 U1 small nuclear ribonucleoprotein C | 1.0e-85 | 85.2 | Show/hide |
Query: RYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGVAYNQHLLGQRPRLPVLPTPLMPGGAPGLLPGIR
RYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVG A+NQHLLGQRPRLPVLPTP++PG APGL+PGIR
Subjt: RYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGVAYNQHLLGQRPRLPVLPTPLMPGGAPGLLPGIR
Query: PPVFPRPVPGAPGYLPAHMMPPMMAPPGAPMPGQVNVPARPPPPAPIPGNTPQPSSTSG----APPMYQANPAAPGSGGYDNLTTMAQAQPSESNH
PPV PRP+PGAPGYLP MPPMMAPPGAP+PGQVN+P+RPPPPAPIPG+ PQPSST+G AP YQANPAAPGSGGYD+ T+MAQ SESNH
Subjt: PPVFPRPVPGAPGYLPAHMMPPMMAPPGAPMPGQVNVPARPPPPAPIPGNTPQPSSTSG----APPMYQANPAAPGSGGYDNLTTMAQAQPSESNH
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| A0A6J1H7P8 U1 small nuclear ribonucleoprotein C | 9.3e-87 | 88.72 | Show/hide |
Query: RYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGVAYNQHLLGQRPRLPVLPTPLMPGGAPGLLPGIR
RYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVG AYNQHLLGQRPRLPVLPTP+MPGGAPGL+PGIR
Subjt: RYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGVAYNQHLLGQRPRLPVLPTPLMPGGAPGLLPGIR
Query: PPVFPRPVPGAPGYLPAHMMPPMMAPPGAPMPGQVNVPARPPPPAPIPGNTPQPSSTSG----APPMYQANPAAPGSGGYDNLTTMAQAQPSESN
PPVFPRP+PGAPGYLP MPPMMAPPGA MPGQVNVP+RPPPPAPIPG+TPQ SST+G AP YQANPAAPGSGGYD+ TTM AQPSESN
Subjt: PPVFPRPVPGAPGYLPAHMMPPMMAPPGAPMPGQVNVPARPPPPAPIPGNTPQPSSTSG----APPMYQANPAAPGSGGYDNLTTMAQAQPSESN
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| A0A6J1KWY5 U1 small nuclear ribonucleoprotein C | 2.9e-88 | 89.74 | Show/hide |
Query: RYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGVAYNQHLLGQRPRLPVLPTPLMPGGAPGLLPGIR
RYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVG AYNQHLLGQRPRLPVLPTP+MPGGAPGL+PGIR
Subjt: RYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGVAYNQHLLGQRPRLPVLPTPLMPGGAPGLLPGIR
Query: PPVFPRPVPGAPGYLPAHMMPPMMAPPGAPMPGQVNVPARPPPPAPIPGNTPQPSSTSG----APPMYQANPAAPGSGGYDNLTTMAQAQPSESN
PPVFPRPVPGAPGYLP MPPMMAPPGA MPGQVNVP+RPPPPAPIPG+T QPSST+G APP YQANPAAPGSGGYD+ TTM AQPSESN
Subjt: PPVFPRPVPGAPGYLPAHMMPPMMAPPGAPMPGQVNVPARPPPPAPIPGNTPQPSSTSG----APPMYQANPAAPGSGGYDNLTTMAQAQPSESN
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| C5XYW4 U1 small nuclear ribonucleoprotein C-2 | 2.4e-47 | 57.89 | Show/hide |
Query: RYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGVAYNQHLLG-----QRPRLPVLPTPLMPGGAP--
RYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR+YYQQFEEQQTQSLIDQRIKEHLGQAAAF Q G +NQH+L RPRLP+LPTP MP G P
Subjt: RYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGVAYNQHLLG-----QRPRLPVLPTPLMPGGAP--
Query: GLLPGIRPPVFPRP----VPGAPGYLPAHMMPP-MMAPPGAPMPGQVNVPARPP-------PPAPIPGNTPQPSS--------TSGAPP-MYQANPAAPG
L+PG+RPP+ P P PGAP +P PP M PGAP PG + P PP P P P P P+S S APP +YQANP AP
Subjt: GLLPGIRPPVFPRP----VPGAPGYLPAHMMPP-MMAPPGAPMPGQVNVPARPP-------PPAPIPGNTPQPSS--------TSGAPP-MYQANPAAPG
Query: ---SGGYDNLTTMAQ-----AQPSESNH
SG T Q A PSE NH
Subjt: ---SGGYDNLTTMAQ-----AQPSESNH
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| C5XZK6 U1 small nuclear ribonucleoprotein C-1 | 3.1e-47 | 57.58 | Show/hide |
Query: RYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGVAYNQHLLG-----QRPRLPVLPTPLMPGG---A
RYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR+YYQQFEEQQTQSLIDQRIKEHLGQAAAF Q G +NQH+L RPRLP+LPTP MP G A
Subjt: RYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGVAYNQHLLG-----QRPRLPVLPTPLMPGG---A
Query: PG--LLPGIRPPVFPRP-VPGAPGYLPAHMM----PPMMAPPGAPMPGQVNVPARPP-------PPAPIPGNTPQPSS--------TSGAPP-MYQANPA
PG L+PG+RPP+ P P +PG PG P + P M PGAP PG + P PP P P P P P+S S APP +YQ NP
Subjt: PG--LLPGIRPPVFPRP-VPGAPGYLPAHMM----PPMMAPPGAPMPGQVNVPARPP-------PPAPIPGNTPQPSS--------TSGAPP-MYQANPA
Query: APG---SGGYDNLTTMAQ-----AQPSESNH
AP SG T Q AQPSE NH
Subjt: APG---SGGYDNLTTMAQ-----AQPSESNH
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| F6HQ26 U1 small nuclear ribonucleoprotein C | 9.0e-63 | 69.44 | Show/hide |
Query: RYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGVAYNQHLLG-----QRPRLPVLPTPLMP--GGAP
RYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ AAFQQVG AYNQHL+ RPRLPVLPTP MP G AP
Subjt: RYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGVAYNQHLLG-----QRPRLPVLPTPLMP--GGAP
Query: -----GLLPGIRPPVFPRPVPGAPGYLPAHMMPPMMAPPGA---PMPGQVNVPARPP----PPAPIPGNTPQPSSTSGAP-----PMYQANPAAPGSGGY
L+PG+RPPV PRPVPGAPGY+PA MP MMAPPGA PMP ++P RPP PPA +PG+T P+S GAP PMYQANPA P SGG+
Subjt: -----GLLPGIRPPVFPRPVPGAPGYLPAHMMPPMMAPPGA---PMPGQVNVPARPP----PPAPIPGNTPQPSSTSGAP-----PMYQANPAAPGSGGY
Query: DNLTTMAQAQPSESNH
D+ AQ E+NH
Subjt: DNLTTMAQAQPSESNH
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| Q32PA0 U1 small nuclear ribonucleoprotein C | 1.1e-17 | 42.38 | Show/hide |
Query: RYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGVAYNQHLLGQRPRLPVLPTPLMPG-GAPGLLPGI
++YCDYCDTYLTHDSPSVRK H +G KHK NV+ YYQ++ E+Q QSLID+ AAFQQ + + P P +PG PG++P
Subjt: RYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGVAYNQHLLGQRPRLPVLPTPLMPG-GAPGLLPGI
Query: R---PPVFPRPVPGAPGYLPAHMMPPMMAPPGAPMPGQVNVPARPPPPAPI
PP+ P P PG +P P M P G MP P PP P+
Subjt: R---PPVFPRPVPGAPGYLPAHMMPPMMAPPGAPMPGQVNVPARPPPPAPI
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| Q56XE4 U1 small nuclear ribonucleoprotein C | 9.0e-47 | 60 | Show/hide |
Query: RYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGVAYNQHLLGQRPRLPVLPTPLMPGGAPGLLPGIR
RYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR YYQQFEEQQTQSLIDQRIKEHLGQ +QQVG +NQH+L RPR P++ L PG P G+R
Subjt: RYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGVAYNQHLLGQRPRLPVLPTPLMPGGAPGLLPGIR
Query: PPVFPRPVPGAPGYLPAHMMPPMMAPPGAPM-PGQVNVPARPPPPAPIPGN-------TPQPSSTSG---------APPMYQANPAAPGSGGYDN
PPV PRP+ GY+P +P MMAPPGAP+ P N RPP APIPG P P G PP Y NPAAP SG ++N
Subjt: PPVFPRPVPGAPGYLPAHMMPPMMAPPGAPM-PGQVNVPARPPPPAPIPGN-------TPQPSSTSG---------APPMYQANPAAPGSGGYDN
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