CuGenDBv2

Gene ID	Sed0008047
Organism	Sechium edule (Chayote v1)
Description	Protein Ycf2
Genome location	Contig00297:43283..44504
RNA-Seq Expression	Sed0008047
Synteny	Sed0008047
Gene Ontology terms	GO:0009507 - chloroplast (cellular component) GO:0016020 - membrane (cellular component) GO:0000166 - nucleotide binding (molecular function)
InterPro domains	IPR008543 - Uncharacterised protein family Ycf2

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

CAB4284022.1 unnamed protein product [Prunus armeniaca]

1.4e-141

68.89

Show/hide

Query:  MNFIGPRNDTLEESFGSSNINRLIVSLLYLPKGKKISESCFLDPK---------KECIMPESNWGSRWWRNWIGKKRDSSCKISNETVAGIEISFKEKDI
        MNFIGPRNDTLEESFGSSNINRLIVSLLYLPKGKKISESCFLDPK         K+CIMPESNWGS WWRNWIGKKR SSCKISNETVAGIEISFKEKDI
Subjt:  MNFIGPRNDTLEESFGSSNINRLIVSLLYLPKGKKISESCFLDPK---------KECIMPESNWGSRWWRNWIGKKRDSSCKISNETVAGIEISFKEKDI

Query:  KYLEFLFVYYMDDQIRKDHDWELFDRLSPRKRRNIINLNSGQLFEILVKDWICYLMFAFREKIPIEVEGFFKQQGAGSTIQSNDIEHVSHLFSRNKWAIS
        KYLEFLFVYYMDD IRKDHDWELFDRLSPRKRRNIINLNSGQLFEILVKDWICYLMFAFREKIP+E EGFFKQQGAGSTIQSN+IEHVSHLFSRNK A  
Subjt:  KYLEFLFVYYMDDQIRKDHDWELFDRLSPRKRRNIINLNSGQLFEILVKDWICYLMFAFREKIPIEVEGFFKQQGAGSTIQSNDIEHVSHLFSRNKWAIS

Query:  LQNCAQFHMWQFRQDLFFSWGRIRTNRIFEEHIERE--LDLV----------------------------------------------------------
        +QNCAQFHM QF QDLFFSWG+      F  +I RE  LD V                                                          
Subjt:  LQNCAQFHMWQFRQDLFFSWGRIRTNRIFEEHIERE--LDLV----------------------------------------------------------

Query:  ------RQCVVGKQGSIDSLGSFLSSNGTNRDRIRPIPKCFSGYSSMSRLFTEREKQMNNHPLPEEIEEFLRNPTRSIRSFSLTDGQNFIWVRILLRGPL
              R+    K+ SI    SFL +  T  +  R  PKC SGYSSMSRLFTEREKQMN H LPEEIEEFL NPTRSIRSFSLTDGQNFIWVRILLRGPL
Subjt:  ------RQCVVGKQGSIDSLGSFLSSNGTNRDRIRPIPKCFSGYSSMSRLFTEREKQMNNHPLPEEIEEFLRNPTRSIRSFSLTDGQNFIWVRILLRGPL

Query:  EIRNC
        EIRNC
Subjt:  EIRNC

QIT04093.1 Ycf2 protein [Luffa aegyptiaca]

1.4e-138

70.5

Show/hide

Query:  MNFIGPRNDTLEESFGSSNINRLIVSLLYLPKGKKISESCFLDPK---------KECIMPESNWGSRWWRNWIGKKRDSSCKISNETVAGIEISFKEKDI
        MNFIGPRNDTLEESFGSSNINRLIVSLLYLPKGKKISESCFLDPK         K+CIMPESNWGSRWWRNWIGKKRDSSCKISNETVAGIEISFKEKDI
Subjt:  MNFIGPRNDTLEESFGSSNINRLIVSLLYLPKGKKISESCFLDPK---------KECIMPESNWGSRWWRNWIGKKRDSSCKISNETVAGIEISFKEKDI

Query:  KYLEFLFVYYMDDQIRKDHDWELFDRLSPRKRRNIINLNSGQLFEILVKDWICYLMFAFREKIPIEVEGFFKQQGAGSTIQSNDIEHVSHLFSRNKWAIS
        KYLEFLFVYYMDDQIRKDHDWELFDRLSPRKRRNIINLNSGQLFEILVKDWICYLMFAFREKIPIEVEGFFKQQGAGSTIQSNDIEHVSHLFSRNKWAIS
Subjt:  KYLEFLFVYYMDDQIRKDHDWELFDRLSPRKRRNIINLNSGQLFEILVKDWICYLMFAFREKIPIEVEGFFKQQGAGSTIQSNDIEHVSHLFSRNKWAIS

Query:  LQNCAQFHMWQFRQDLFFSWGRIRTNRIFEEHIERE----LDLV--------------------------------------------------------
        LQNCAQFHMWQFRQDLFFSWG+      F  +I RE    LD V                                                        
Subjt:  LQNCAQFHMWQFRQDLFFSWGRIRTNRIFEEHIERE----LDLV--------------------------------------------------------

Query:  --------RQCVVGKQGSIDSLGSFLSSNGTNRDRIRPIPKCFSGYSSMSRLFTEREKQMNNHPLPEEIEEFLRNPTRSIRSF
                R+    K+ SI    SFL +  T  +  R  PKCFSGYSSMSRLFTEREKQMNNHPLPEEIEEFL NPTRSIRSF
Subjt:  --------RQCVVGKQGSIDSLGSFLSSNGTNRDRIRPIPKCFSGYSSMSRLFTEREKQMNNHPLPEEIEEFLRNPTRSIRSF

YP_009420838.1 Ycf2 [Citrullus colocynthis]

8.5e-139

69.97

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Query:  MNFIGPRNDTLEESFGSSNINRLIVSLLYLPKGKKISESCFLDPK---------KECIMPESNWGSRWWRNWIGKKRDSSCKISNETVAGIEISFKEKDI
        MNFIGPRNDTLEESFGSSNINRLIVSLLYLPKGKKISESCFLDPK         K+CIMPESNWGSRWWRNWIGKKRDSSCKISNETVAG+EISFKEKDI
Subjt:  MNFIGPRNDTLEESFGSSNINRLIVSLLYLPKGKKISESCFLDPK---------KECIMPESNWGSRWWRNWIGKKRDSSCKISNETVAGIEISFKEKDI

Query:  KYLEFLFVYYMDDQIRKDHDWELFDRLSPRKRRNIINLNSGQLFEILVKDWICYLMFAFREKIPIEVEGFFKQQGAGSTIQSNDIEHVSHLFSRNKWAIS
        KYLEFLFVYYMDDQIRKDHDWELFDRLSPRKRRNIINLNSGQLFEILVKDWICYLMFAFREKIPIEVEGFFKQQGAGSTIQSNDIEHVSHLFSRNKWAIS
Subjt:  KYLEFLFVYYMDDQIRKDHDWELFDRLSPRKRRNIINLNSGQLFEILVKDWICYLMFAFREKIPIEVEGFFKQQGAGSTIQSNDIEHVSHLFSRNKWAIS

Query:  LQNCAQFHMWQFRQDLFFSWGRIRTNRIFEEHIERE----------------------------LDLVRQCVVGKQGSIDSLG-----------------
        LQNCAQFHMWQFRQDLFFSWG+      F  +I RE                             D  R   V    S  S G                 
Subjt:  LQNCAQFHMWQFRQDLFFSWGRIRTNRIFEEHIERE----------------------------LDLVRQCVVGKQGSIDSLG-----------------

Query:  -----------------------SFLSSNGTNRDRIRPIPKCFSGYSSMSRLFTEREKQMNNHPLPEEIEEFLRNPTRSIRSF
                               SFL +  T  +  R  PKCFSGYSSMSRLFTEREKQMNNHPLPEEIEEFL NPTRSIRSF
Subjt:  -----------------------SFLSSNGTNRDRIRPIPKCFSGYSSMSRLFTEREKQMNNHPLPEEIEEFLRNPTRSIRSF

YP_009468904.1 hypothetical chloroplast RF2 [Gynostemma compressum]

1.4e-138

70.5

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Query:  MNFIGPRNDTLEESFGSSNINRLIVSLLYLPKGKKISESCFLDPK---------KECIMPESNWGSRWWRNWIGKKRDSSCKISNETVAGIEISFKEKDI
        MNFIGPRNDTLEESFGSSNINRLIVSLLYLPKGKKISESCFLDPK         K+CIMPESNWGSRWWRNWIGKKRDSSCKISNETVAGIEISFKEKDI
Subjt:  MNFIGPRNDTLEESFGSSNINRLIVSLLYLPKGKKISESCFLDPK---------KECIMPESNWGSRWWRNWIGKKRDSSCKISNETVAGIEISFKEKDI

Query:  KYLEFLFVYYMDDQIRKDHDWELFDRLSPRKRRNIINLNSGQLFEILVKDWICYLMFAFREKIPIEVEGFFKQQGAGSTIQSNDIEHVSHLFSRNKWAIS
        KYLEFLFVYYMDDQIRKDHDWELFDRLSPRKRRNIINLNSGQLFEILVKDWICYLMFAFREKIPIEVEGFFKQQGAGSTIQSNDIEHVSHLFSRNKWAIS
Subjt:  KYLEFLFVYYMDDQIRKDHDWELFDRLSPRKRRNIINLNSGQLFEILVKDWICYLMFAFREKIPIEVEGFFKQQGAGSTIQSNDIEHVSHLFSRNKWAIS

Query:  LQNCAQFHMWQFRQDLFFSWGRIRTNRIFEEHIERE----LDLV--------------------------------------------------------
        LQNCAQFHMWQFRQDLFFSWG+      F  +I RE    LD V                                                        
Subjt:  LQNCAQFHMWQFRQDLFFSWGRIRTNRIFEEHIERE----LDLV--------------------------------------------------------

Query:  --------RQCVVGKQGSIDSLGSFLSSNGTNRDRIRPIPKCFSGYSSMSRLFTEREKQMNNHPLPEEIEEFLRNPTRSIRSF
                R+    K+ SI    SFL +  T  +  R  PKCFSGYSSMSRLFTEREKQMNNHPLPEEIEEFL NPTRSIRSF
Subjt:  --------RQCVVGKQGSIDSLGSFLSSNGTNRDRIRPIPKCFSGYSSMSRLFTEREKQMNNHPLPEEIEEFLRNPTRSIRSF

YP_009674434.1 photosystem I assembly protein Ycf2 [Siraitia grosvenorii]

3.8e-139

70.23

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Query:  MNFIGPRNDTLEESFGSSNINRLIVSLLYLPKGKKISESCFLDPK---------KECIMPESNWGSRWWRNWIGKKRDSSCKISNETVAGIEISFKEKDI
        MNFIGPRNDTLEESFGSSNINRLIVSLLYLPKGKKISESCFLDPK         K+CIMPESNWGSRWWRNWIGKKRDSSCKISNETVAGIEISFKEKDI
Subjt:  MNFIGPRNDTLEESFGSSNINRLIVSLLYLPKGKKISESCFLDPK---------KECIMPESNWGSRWWRNWIGKKRDSSCKISNETVAGIEISFKEKDI

Query:  KYLEFLFVYYMDDQIRKDHDWELFDRLSPRKRRNIINLNSGQLFEILVKDWICYLMFAFREKIPIEVEGFFKQQGAGSTIQSNDIEHVSHLFSRNKWAIS
        KYLEFLFVYYMDDQIRKDHDWELFDRLSPRKRRNIINLNSGQLFEILVKDWICYLMFAFREKIPIEVEGFFKQQGAGSTIQSNDIEHVSHLFSRNKWAIS
Subjt:  KYLEFLFVYYMDDQIRKDHDWELFDRLSPRKRRNIINLNSGQLFEILVKDWICYLMFAFREKIPIEVEGFFKQQGAGSTIQSNDIEHVSHLFSRNKWAIS

Query:  LQNCAQFHMWQFRQDLFFSWGRIRTNRIFEEHIERE----------------------------LDLVRQCVVGKQGSIDSLG-----------------
        LQNCAQFHMWQFRQDLFFSWG+      F  +I RE                             D  R   V    S  S G                 
Subjt:  LQNCAQFHMWQFRQDLFFSWGRIRTNRIFEEHIERE----------------------------LDLVRQCVVGKQGSIDSLG-----------------

Query:  -----------------------SFLSSNGTNRDRIRPIPKCFSGYSSMSRLFTEREKQMNNHPLPEEIEEFLRNPTRSIRSF
                               SFL +  T  +  R  PKCFSGYSSMSRLFTEREKQMNNHPLPEEIEEFL NPTRSIRSF
Subjt:  -----------------------SFLSSNGTNRDRIRPIPKCFSGYSSMSRLFTEREKQMNNHPLPEEIEEFLRNPTRSIRSF

TrEMBL top hits

e value

%identity

Alignment

A0A249RXF2 Protein Ycf2

4.1e-139

69.97

Show/hide

Query:  MNFIGPRNDTLEESFGSSNINRLIVSLLYLPKGKKISESCFLDPK---------KECIMPESNWGSRWWRNWIGKKRDSSCKISNETVAGIEISFKEKDI
        MNFIGPRNDTLEESFGSSNINRLIVSLLYLPKGKKISESCFLDPK         K+CIMPESNWGSRWWRNWIGKKRDSSCKISNETVAG+EISFKEKDI
Subjt:  MNFIGPRNDTLEESFGSSNINRLIVSLLYLPKGKKISESCFLDPK---------KECIMPESNWGSRWWRNWIGKKRDSSCKISNETVAGIEISFKEKDI

Query:  KYLEFLFVYYMDDQIRKDHDWELFDRLSPRKRRNIINLNSGQLFEILVKDWICYLMFAFREKIPIEVEGFFKQQGAGSTIQSNDIEHVSHLFSRNKWAIS
        KYLEFLFVYYMDDQIRKDHDWELFDRLSPRKRRNIINLNSGQLFEILVKDWICYLMFAFREKIPIEVEGFFKQQGAGSTIQSNDIEHVSHLFSRNKWAIS
Subjt:  KYLEFLFVYYMDDQIRKDHDWELFDRLSPRKRRNIINLNSGQLFEILVKDWICYLMFAFREKIPIEVEGFFKQQGAGSTIQSNDIEHVSHLFSRNKWAIS

Query:  LQNCAQFHMWQFRQDLFFSWGRIRTNRIFEEHIERE----------------------------LDLVRQCVVGKQGSIDSLG-----------------
        LQNCAQFHMWQFRQDLFFSWG+      F  +I RE                             D  R   V    S  S G                 
Subjt:  LQNCAQFHMWQFRQDLFFSWGRIRTNRIFEEHIERE----------------------------LDLVRQCVVGKQGSIDSLG-----------------

Query:  -----------------------SFLSSNGTNRDRIRPIPKCFSGYSSMSRLFTEREKQMNNHPLPEEIEEFLRNPTRSIRSF
                               SFL +  T  +  R  PKCFSGYSSMSRLFTEREKQMNNHPLPEEIEEFL NPTRSIRSF
Subjt:  -----------------------SFLSSNGTNRDRIRPIPKCFSGYSSMSRLFTEREKQMNNHPLPEEIEEFLRNPTRSIRSF

A0A343F2F1 Protein Ycf2

4.1e-139

69.97

Show/hide

Query:  MNFIGPRNDTLEESFGSSNINRLIVSLLYLPKGKKISESCFLDPK---------KECIMPESNWGSRWWRNWIGKKRDSSCKISNETVAGIEISFKEKDI
        MNFIGPRNDTLEESFGSSNINRLIVSLLYLPKGKKISESCFLDPK         K+CIMPESNWGSRWWRNWIGKKRDSSCKISNETVAG+EISFKEKDI
Subjt:  MNFIGPRNDTLEESFGSSNINRLIVSLLYLPKGKKISESCFLDPK---------KECIMPESNWGSRWWRNWIGKKRDSSCKISNETVAGIEISFKEKDI

Query:  KYLEFLFVYYMDDQIRKDHDWELFDRLSPRKRRNIINLNSGQLFEILVKDWICYLMFAFREKIPIEVEGFFKQQGAGSTIQSNDIEHVSHLFSRNKWAIS
        KYLEFLFVYYMDDQIRKDHDWELFDRLSPRKRRNIINLNSGQLFEILVKDWICYLMFAFREKIPIEVEGFFKQQGAGSTIQSNDIEHVSHLFSRNKWAIS
Subjt:  KYLEFLFVYYMDDQIRKDHDWELFDRLSPRKRRNIINLNSGQLFEILVKDWICYLMFAFREKIPIEVEGFFKQQGAGSTIQSNDIEHVSHLFSRNKWAIS

Query:  LQNCAQFHMWQFRQDLFFSWGRIRTNRIFEEHIERE----------------------------LDLVRQCVVGKQGSIDSLG-----------------
        LQNCAQFHMWQFRQDLFFSWG+      F  +I RE                             D  R   V    S  S G                 
Subjt:  LQNCAQFHMWQFRQDLFFSWGRIRTNRIFEEHIERE----------------------------LDLVRQCVVGKQGSIDSLG-----------------

Query:  -----------------------SFLSSNGTNRDRIRPIPKCFSGYSSMSRLFTEREKQMNNHPLPEEIEEFLRNPTRSIRSF
                               SFL +  T  +  R  PKCFSGYSSMSRLFTEREKQMNNHPLPEEIEEFL NPTRSIRSF
Subjt:  -----------------------SFLSSNGTNRDRIRPIPKCFSGYSSMSRLFTEREKQMNNHPLPEEIEEFLRNPTRSIRSF

A0A514YKZ7 Protein Ycf2

1.8e-139

70.23

Show/hide

Query:  MNFIGPRNDTLEESFGSSNINRLIVSLLYLPKGKKISESCFLDPK---------KECIMPESNWGSRWWRNWIGKKRDSSCKISNETVAGIEISFKEKDI
        MNFIGPRNDTLEESFGSSNINRLIVSLLYLPKGKKISESCFLDPK         K+CIMPESNWGSRWWRNWIGKKRDSSCKISNETVAGIEISFKEKDI
Subjt:  MNFIGPRNDTLEESFGSSNINRLIVSLLYLPKGKKISESCFLDPK---------KECIMPESNWGSRWWRNWIGKKRDSSCKISNETVAGIEISFKEKDI

Query:  KYLEFLFVYYMDDQIRKDHDWELFDRLSPRKRRNIINLNSGQLFEILVKDWICYLMFAFREKIPIEVEGFFKQQGAGSTIQSNDIEHVSHLFSRNKWAIS
        KYLEFLFVYYMDDQIRKDHDWELFDRLSPRKRRNIINLNSGQLFEILVKDWICYLMFAFREKIPIEVEGFFKQQGAGSTIQSNDIEHVSHLFSRNKWAIS
Subjt:  KYLEFLFVYYMDDQIRKDHDWELFDRLSPRKRRNIINLNSGQLFEILVKDWICYLMFAFREKIPIEVEGFFKQQGAGSTIQSNDIEHVSHLFSRNKWAIS

Query:  LQNCAQFHMWQFRQDLFFSWGRIRTNRIFEEHIERE----------------------------LDLVRQCVVGKQGSIDSLG-----------------
        LQNCAQFHMWQFRQDLFFSWG+      F  +I RE                             D  R   V    S  S G                 
Subjt:  LQNCAQFHMWQFRQDLFFSWGRIRTNRIFEEHIERE----------------------------LDLVRQCVVGKQGSIDSLG-----------------

Query:  -----------------------SFLSSNGTNRDRIRPIPKCFSGYSSMSRLFTEREKQMNNHPLPEEIEEFLRNPTRSIRSF
                               SFL +  T  +  R  PKCFSGYSSMSRLFTEREKQMNNHPLPEEIEEFL NPTRSIRSF
Subjt:  -----------------------SFLSSNGTNRDRIRPIPKCFSGYSSMSRLFTEREKQMNNHPLPEEIEEFLRNPTRSIRSF

A0A6H0ET42 Protein Ycf2

7.0e-139

70.5

Show/hide

Query:  MNFIGPRNDTLEESFGSSNINRLIVSLLYLPKGKKISESCFLDPK---------KECIMPESNWGSRWWRNWIGKKRDSSCKISNETVAGIEISFKEKDI
        MNFIGPRNDTLEESFGSSNINRLIVSLLYLPKGKKISESCFLDPK         K+CIMPESNWGSRWWRNWIGKKRDSSCKISNETVAGIEISFKEKDI
Subjt:  MNFIGPRNDTLEESFGSSNINRLIVSLLYLPKGKKISESCFLDPK---------KECIMPESNWGSRWWRNWIGKKRDSSCKISNETVAGIEISFKEKDI

Query:  KYLEFLFVYYMDDQIRKDHDWELFDRLSPRKRRNIINLNSGQLFEILVKDWICYLMFAFREKIPIEVEGFFKQQGAGSTIQSNDIEHVSHLFSRNKWAIS
        KYLEFLFVYYMDDQIRKDHDWELFDRLSPRKRRNIINLNSGQLFEILVKDWICYLMFAFREKIPIEVEGFFKQQGAGSTIQSNDIEHVSHLFSRNKWAIS
Subjt:  KYLEFLFVYYMDDQIRKDHDWELFDRLSPRKRRNIINLNSGQLFEILVKDWICYLMFAFREKIPIEVEGFFKQQGAGSTIQSNDIEHVSHLFSRNKWAIS

Query:  LQNCAQFHMWQFRQDLFFSWGRIRTNRIFEEHIERE----LDLV--------------------------------------------------------
        LQNCAQFHMWQFRQDLFFSWG+      F  +I RE    LD V                                                        
Subjt:  LQNCAQFHMWQFRQDLFFSWGRIRTNRIFEEHIERE----LDLV--------------------------------------------------------

Query:  --------RQCVVGKQGSIDSLGSFLSSNGTNRDRIRPIPKCFSGYSSMSRLFTEREKQMNNHPLPEEIEEFLRNPTRSIRSF
                R+    K+ SI    SFL +  T  +  R  PKCFSGYSSMSRLFTEREKQMNNHPLPEEIEEFL NPTRSIRSF
Subjt:  --------RQCVVGKQGSIDSLGSFLSSNGTNRDRIRPIPKCFSGYSSMSRLFTEREKQMNNHPLPEEIEEFLRNPTRSIRSF

A0A6J5V726 Uncharacterized protein

6.7e-142

68.89

Show/hide

Query:  MNFIGPRNDTLEESFGSSNINRLIVSLLYLPKGKKISESCFLDPK---------KECIMPESNWGSRWWRNWIGKKRDSSCKISNETVAGIEISFKEKDI
        MNFIGPRNDTLEESFGSSNINRLIVSLLYLPKGKKISESCFLDPK         K+CIMPESNWGS WWRNWIGKKR SSCKISNETVAGIEISFKEKDI
Subjt:  MNFIGPRNDTLEESFGSSNINRLIVSLLYLPKGKKISESCFLDPK---------KECIMPESNWGSRWWRNWIGKKRDSSCKISNETVAGIEISFKEKDI

Query:  KYLEFLFVYYMDDQIRKDHDWELFDRLSPRKRRNIINLNSGQLFEILVKDWICYLMFAFREKIPIEVEGFFKQQGAGSTIQSNDIEHVSHLFSRNKWAIS
        KYLEFLFVYYMDD IRKDHDWELFDRLSPRKRRNIINLNSGQLFEILVKDWICYLMFAFREKIP+E EGFFKQQGAGSTIQSN+IEHVSHLFSRNK A  
Subjt:  KYLEFLFVYYMDDQIRKDHDWELFDRLSPRKRRNIINLNSGQLFEILVKDWICYLMFAFREKIPIEVEGFFKQQGAGSTIQSNDIEHVSHLFSRNKWAIS

Query:  LQNCAQFHMWQFRQDLFFSWGRIRTNRIFEEHIERE--LDLV----------------------------------------------------------
        +QNCAQFHM QF QDLFFSWG+      F  +I RE  LD V                                                          
Subjt:  LQNCAQFHMWQFRQDLFFSWGRIRTNRIFEEHIERE--LDLV----------------------------------------------------------

Query:  ------RQCVVGKQGSIDSLGSFLSSNGTNRDRIRPIPKCFSGYSSMSRLFTEREKQMNNHPLPEEIEEFLRNPTRSIRSFSLTDGQNFIWVRILLRGPL
              R+    K+ SI    SFL +  T  +  R  PKC SGYSSMSRLFTEREKQMN H LPEEIEEFL NPTRSIRSFSLTDGQNFIWVRILLRGPL
Subjt:  ------RQCVVGKQGSIDSLGSFLSSNGTNRDRIRPIPKCFSGYSSMSRLFTEREKQMNNHPLPEEIEEFLRNPTRSIRSFSLTDGQNFIWVRILLRGPL

Query:  EIRNC
        EIRNC
Subjt:  EIRNC

SwissProt top hits

e value

%identity

Alignment

A0ZZ78 Protein Ycf2

2.5e-133

68.32

Show/hide

Query:  MNFIGPRNDTLEESFGSSNINRLIVSLLYLPKGKKISESCFLDPK---------KECIMPESNWGSRWWRNWIGKKRDSSCKISNETVAGIEISFKEKDI
        MN IGPRNDTLEESFGSSNINRLIVSLLYLPKGKKISESCFLDPK         K+CIMPESN  SRWWRNWIGKKRDSSCKISNETVAGIEISFKEKDI
Subjt:  MNFIGPRNDTLEESFGSSNINRLIVSLLYLPKGKKISESCFLDPK---------KECIMPESNWGSRWWRNWIGKKRDSSCKISNETVAGIEISFKEKDI

Query:  KYLEFLFVYYMDDQIRKDHDWELFDRLSPRKRRNIINLNSGQLFEILVKDWICYLMFAFREKIPIEVEGFFKQQGAGSTIQSNDIEHVSHLFSRNKWAIS
        KYLEFLFVYYMDD IRKDHDWELFDRLSP KRRNIINLNSGQLFEILVKDWICYLMFAFREKIPIEVEGFFKQQGAGSTIQSNDIEHVSHLFSR KWAIS
Subjt:  KYLEFLFVYYMDDQIRKDHDWELFDRLSPRKRRNIINLNSGQLFEILVKDWICYLMFAFREKIPIEVEGFFKQQGAGSTIQSNDIEHVSHLFSRNKWAIS

Query:  LQNCAQFHMWQFRQDLFFSWGRIRTNRIFEEHIERE----LDLV----RQCVVGKQGSIDS-------LGSFL---------SSNGTNRDRIRPI-----
        LQNCAQFHMWQFRQDLF SWG+      F  +I RE    LD V    R     K  ++ S         SF+          S+  +RDR   I     
Subjt:  LQNCAQFHMWQFRQDLFFSWGRIRTNRIFEEHIERE----LDLV----RQCVVGKQGSIDS-------LGSFL---------SSNGTNRDRIRPI-----

Query:  --------------------------------------PKCFSGYSSMSRLFTEREKQMNNHPLPEEIEEFLRNPTRSIRSF
                                              PKC SGYSSMSRLFTEREK+MNNH LPEEIEEFL NPTRSIRSF
Subjt:  --------------------------------------PKCFSGYSSMSRLFTEREKQMNNHPLPEEIEEFLRNPTRSIRSF

A4GYV4 Protein Ycf2

1.4e-131

67.62

Show/hide

Query:  MNFIGPRNDTLEESFGSSNINRLIVSLLYLPKGKKISESCFLDPK---------KECIMPESNWGSRWWRNWIGKKRDSSCKISNETVAGIEISFKEKDI
        MN IGPRNDTLEESFGSSNINRLIVSLLYLPKGKKISES FLDPK         K+CIM ESNWGSRWWRNWIGKKRDSSCKISNETVAGIEISFKEKDI
Subjt:  MNFIGPRNDTLEESFGSSNINRLIVSLLYLPKGKKISESCFLDPK---------KECIMPESNWGSRWWRNWIGKKRDSSCKISNETVAGIEISFKEKDI

Query:  KYLEFLFVYYMDDQIRKDHDWELFDRLSPRKRRNIINLNSGQLFEILVKDWICYLMFAFREKIPIEVEGFFKQQGAGSTIQSNDIEHVSHLFSRNKWAIS
        KYLEFLFVYYMDD IRKDHDWELFDRLSPRK RNIINLNSGQLFEILVKDWICYLMFAFREKIPIEVEGFFKQQGAGSTIQSNDIEHVSHLFSR KWAIS
Subjt:  KYLEFLFVYYMDDQIRKDHDWELFDRLSPRKRRNIINLNSGQLFEILVKDWICYLMFAFREKIPIEVEGFFKQQGAGSTIQSNDIEHVSHLFSRNKWAIS

Query:  LQNCAQFHMWQFRQDLFFSWGRIRTNRIFEEHIERE----LDLV-------------------------RQCVVGKQGS------------IDSLG----
        LQNCAQFHMWQFRQDLF SWG       F  +I RE    LD V                            V G+  S             DS+     
Subjt:  LQNCAQFHMWQFRQDLFFSWGRIRTNRIFEEHIERE----LDLV-------------------------RQCVVGKQGS------------IDSLG----

Query:  -----------------------SFLSSNGTNRDRIRPIPKCFSGYSSMSRLFTEREKQMNNHPLPEEIEEFLRNPTRSIRSF
                               SFL +  T  +  R  PKC SGYSSMSRLFTE  K+MNNH LPEEIEEFL NPTRSIRSF
Subjt:  -----------------------SFLSSNGTNRDRIRPIPKCFSGYSSMSRLFTEREKQMNNHPLPEEIEEFLRNPTRSIRSF

B1NWJ3 Protein Ycf2

1.4e-131

67.62

Show/hide

Query:  MNFIGPRNDTLEESFGSSNINRLIVSLLYLPKGKKISESCFLDPK---------KECIMPESNWGSRWWRNWIGKKRDSSCKISNETVAGIEISFKEKDI
        MN IGPRNDTLEESF SSNINRLIVSLLYLPKGKKISES FLDPK         K+CIM ESNWGSRWWRNWIGKKRDSSCKISNETVAGIEISFKEKDI
Subjt:  MNFIGPRNDTLEESFGSSNINRLIVSLLYLPKGKKISESCFLDPK---------KECIMPESNWGSRWWRNWIGKKRDSSCKISNETVAGIEISFKEKDI

Query:  KYLEFLFVYYMDDQIRKDHDWELFDRLSPRKRRNIINLNSGQLFEILVKDWICYLMFAFREKIPIEVEGFFKQQGAGSTIQSNDIEHVSHLFSRNKWAIS
        KYLEFLFVYYMDD IRKDHDWELFDRLSPRK RNIINLNSGQLFEILVKDWICYLMFAFREKIPIEVEGFFKQQGAGSTIQSNDIEHVSHLFSR KWAIS
Subjt:  KYLEFLFVYYMDDQIRKDHDWELFDRLSPRKRRNIINLNSGQLFEILVKDWICYLMFAFREKIPIEVEGFFKQQGAGSTIQSNDIEHVSHLFSRNKWAIS

Query:  LQNCAQFHMWQFRQDLFFSWGRIRTNRIFEEHIERE----LDLV-------------------------RQCVVGKQGS------------IDSLG----
        LQNCAQFHMWQFRQDLF SWG       F  +I RE    LD V                            V G+  S             DS+     
Subjt:  LQNCAQFHMWQFRQDLFFSWGRIRTNRIFEEHIERE----LDLV-------------------------RQCVVGKQGS------------IDSLG----

Query:  -----------------------SFLSSNGTNRDRIRPIPKCFSGYSSMSRLFTEREKQMNNHPLPEEIEEFLRNPTRSIRSF
                               SFL +  T  +  R  PKC SGYSSMSRLFTE EK+MNNH LPEEIEEFL NPTRSIRSF
Subjt:  -----------------------SFLSSNGTNRDRIRPIPKCFSGYSSMSRLFTEREKQMNNHPLPEEIEEFLRNPTRSIRSF

Q09WV7 Protein Ycf2

7.7e-135

68.31

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Query:  MNFIGPRNDTLEESFGSSNINRLIVSLLYLPKGKKISESCFLDPK---------KECIMPESNWGSRWWRNWIGKKRDSSCKISNETVAGIEISFKEKDI
        MNFIGPRNDTLEESFGSSNINRLIVSLLYLPKGKKISESCFLDPK         K+CIMPESNWGSRWWRNW+GKKRDSSCKISNETV GIEISFKEKDI
Subjt:  MNFIGPRNDTLEESFGSSNINRLIVSLLYLPKGKKISESCFLDPK---------KECIMPESNWGSRWWRNWIGKKRDSSCKISNETVAGIEISFKEKDI

Query:  KYLEFLFVYYMDDQIRKDHDWELFDRLSPRKRRNIINLNSGQLFEILVKDWICYLMFAFREKIPIEVEGFFKQQGAGSTIQSNDIEHVSHLFSRNKWAIS
        KYLEFLFVYYMDD IRKDHDWELFDRLSPRKRRNIINLNSGQLFEILVKDWICYLMFAFREKIPIE EGFFKQQGAGSTIQSNDIEHVSHLFSRNKWAIS
Subjt:  KYLEFLFVYYMDDQIRKDHDWELFDRLSPRKRRNIINLNSGQLFEILVKDWICYLMFAFREKIPIEVEGFFKQQGAGSTIQSNDIEHVSHLFSRNKWAIS

Query:  LQNCAQFHMWQFRQDLFFSWGRIRTNRIFEEHIERE----LDLV--------------------------------------------------------
        LQNCAQFHMWQFRQDLFFSWG+      F  +I RE    LD V                                                        
Subjt:  LQNCAQFHMWQFRQDLFFSWGRIRTNRIFEEHIERE----LDLV--------------------------------------------------------

Query:  --------RQCVVGKQGSIDSLGSFLSSNGTNRDRIRPIPKCFSGYSSMSRLFTEREKQMNNHPLPEEIEEF--LRNPTRSIRSF
                R+    K+ SI    SFL    T  +  R  PKC SGYSSMSRLFTEREKQMNNH LPEEIEEF  L N TRSIRSF
Subjt:  --------RQCVVGKQGSIDSLGSFLSSNGTNRDRIRPIPKCFSGYSSMSRLFTEREKQMNNHPLPEEIEEF--LRNPTRSIRSF

Q2L949 Protein Ycf2

3.8e-134

68.59

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Query:  MNFIGPRNDTLEESFGSSNINRLIVSLLYLPKGKKISESCFLDPK---------KECIMPESNWGSRWWRNWIGKKRDSSCKISNETVAGIEISFKEKDI
        MN IGPRNDTLEESFGSSNINRLIVSLLYLPKGKKISESCFLDPK         K+CIMPESN GSRWWRNWIGKKRDSSCKISNETVAGIEISFKEKDI
Subjt:  MNFIGPRNDTLEESFGSSNINRLIVSLLYLPKGKKISESCFLDPK---------KECIMPESNWGSRWWRNWIGKKRDSSCKISNETVAGIEISFKEKDI

Query:  KYLEFLFVYYMDDQIRKDHDWELFDRLSPRKRRNIINLNSGQLFEILVKDWICYLMFAFREKIPIEVEGFFKQQGAGSTIQSNDIEHVSHLFSRNKWAIS
        KYLEFLFVYYMDD IRKDHDWELFDRLSP KRRNIINLNSGQLFEILVKDWICYLMFAFREKIPIEVEGFFKQQGAGSTIQSNDIEHVSHLFSR KWAIS
Subjt:  KYLEFLFVYYMDDQIRKDHDWELFDRLSPRKRRNIINLNSGQLFEILVKDWICYLMFAFREKIPIEVEGFFKQQGAGSTIQSNDIEHVSHLFSRNKWAIS

Query:  LQNCAQFHMWQFRQDLFFSWGRIRTNRIFEEHIERE----LDLV----RQCVVGKQGSIDS-------LGSFL---------SSNGTNRDRIRPI-----
        LQNCAQFHMWQFRQDLF SWG+      F  +I RE    LD V    R     K  ++ S         SF+          S+  +RDR   I     
Subjt:  LQNCAQFHMWQFRQDLFFSWGRIRTNRIFEEHIERE----LDLV----RQCVVGKQGSIDS-------LGSFL---------SSNGTNRDRIRPI-----

Query:  --------------------------------------PKCFSGYSSMSRLFTEREKQMNNHPLPEEIEEFLRNPTRSIRSF
                                              PKC SGYSSMSRLFTEREK+MNNH LPEEIEEFL NPTRSIRSF
Subjt:  --------------------------------------PKCFSGYSSMSRLFTEREKQMNNHPLPEEIEEFLRNPTRSIRSF

Arabidopsis top hits

e value

%identity

Alignment

ATCG00860.1 Chloroplast Ycf2;ATPase, AAA type, core

4.3e-125

63.64

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Query:  MNFIGPRNDTLEESFGSSNINRLIVSLLYLPKGKKISESCFLDPK---------KECIMPESNWGSRWWRNWIGKKRDSSCKISNETVAGIEISFKEKDI
        MN IGPRNDT EESFGS NINRLIVSLLYL KGKKISESCF DPK         ++CIMPESNW SRWWRNWIGKKR   CKISNETVAGI+ISFKEKDI
Subjt:  MNFIGPRNDTLEESFGSSNINRLIVSLLYLPKGKKISESCFLDPK---------KECIMPESNWGSRWWRNWIGKKRDSSCKISNETVAGIEISFKEKDI

Query:  KYLEFLFVYYMDDQIRKDHDWELFDRLSPRKRRNIINLNSGQLFEILVKDWICYLMFAFREKIPIEVEGFFKQQGAGSTIQSNDIEHVSHLFSRNKWAIS
        KYLEFLFVYYMDD IRK HDWELFDRLSP KRRNIINLNSGQLFEILVKDWICYLMFAFREKIPIEVEGF KQQGAGSTIQSNDIEHVSHLFSRNKWAIS
Subjt:  KYLEFLFVYYMDDQIRKDHDWELFDRLSPRKRRNIINLNSGQLFEILVKDWICYLMFAFREKIPIEVEGFFKQQGAGSTIQSNDIEHVSHLFSRNKWAIS

Query:  LQNCAQFHMWQFRQDLFFSWGRIRTNRIFEEHIERE----LDLV--------------------------------------------------------
        LQNCAQFHMWQF QDLF SWG+      F   I RE    LD V                                                        
Subjt:  LQNCAQFHMWQFRQDLFFSWGRIRTNRIFEEHIERE----LDLV--------------------------------------------------------

Query:  ----------RQCVVGKQGSIDSLGSFLSSNGTNRDRIRPIPKCFSGYSSMSRLFTEREKQMNNHPLPEEIEEFLRNPTRSIRSF
                  R+    K+ SI    SF+ + G   +  R  PK  SGYSSM RLFTEREK+MNNH LPEE EEFL NPTR+IRSF
Subjt:  ----------RQCVVGKQGSIDSLGSFLSSNGTNRDRIRPIPKCFSGYSSMSRLFTEREKQMNNHPLPEEIEEFLRNPTRSIRSF

ATCG01280.1 Chloroplast Ycf2;ATPase, AAA type, core

4.3e-125

63.64

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Query:  MNFIGPRNDTLEESFGSSNINRLIVSLLYLPKGKKISESCFLDPK---------KECIMPESNWGSRWWRNWIGKKRDSSCKISNETVAGIEISFKEKDI
        MN IGPRNDT EESFGS NINRLIVSLLYL KGKKISESCF DPK         ++CIMPESNW SRWWRNWIGKKR   CKISNETVAGI+ISFKEKDI
Subjt:  MNFIGPRNDTLEESFGSSNINRLIVSLLYLPKGKKISESCFLDPK---------KECIMPESNWGSRWWRNWIGKKRDSSCKISNETVAGIEISFKEKDI

Query:  KYLEFLFVYYMDDQIRKDHDWELFDRLSPRKRRNIINLNSGQLFEILVKDWICYLMFAFREKIPIEVEGFFKQQGAGSTIQSNDIEHVSHLFSRNKWAIS
        KYLEFLFVYYMDD IRK HDWELFDRLSP KRRNIINLNSGQLFEILVKDWICYLMFAFREKIPIEVEGF KQQGAGSTIQSNDIEHVSHLFSRNKWAIS
Subjt:  KYLEFLFVYYMDDQIRKDHDWELFDRLSPRKRRNIINLNSGQLFEILVKDWICYLMFAFREKIPIEVEGFFKQQGAGSTIQSNDIEHVSHLFSRNKWAIS

Query:  LQNCAQFHMWQFRQDLFFSWGRIRTNRIFEEHIERE----LDLV--------------------------------------------------------
        LQNCAQFHMWQF QDLF SWG+      F   I RE    LD V                                                        
Subjt:  LQNCAQFHMWQFRQDLFFSWGRIRTNRIFEEHIERE----LDLV--------------------------------------------------------

Query:  ----------RQCVVGKQGSIDSLGSFLSSNGTNRDRIRPIPKCFSGYSSMSRLFTEREKQMNNHPLPEEIEEFLRNPTRSIRSF
                  R+    K+ SI    SF+ + G   +  R  PK  SGYSSM RLFTEREK+MNNH LPEE EEFL NPTR+IRSF
Subjt:  ----------RQCVVGKQGSIDSLGSFLSSNGTNRDRIRPIPKCFSGYSSMSRLFTEREKQMNNHPLPEEIEEFLRNPTRSIRSF

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGAATTTCATTGGACCCAGAAATGATACATTGGAAGAATCTTTTGGCTCTTCCAATATCAATAGGTTGATTGTTTCGCTCCTGTATCTTCCAAAAGGAAAAAAGATCTC
TGAGAGCTGTTTCCTGGATCCGAAAAAAGAATGTATCATGCCTGAATCTAACTGGGGTTCGCGGTGGTGGAGGAACTGGATCGGAAAAAAGAGGGATTCCAGTTGTAAGA
TATCTAATGAAACCGTCGCTGGAATTGAGATCTCATTCAAAGAGAAAGATATAAAATATCTGGAGTTTCTTTTTGTATATTATATGGATGATCAGATCCGCAAGGACCAT
GATTGGGAATTGTTTGATCGTCTTTCTCCGAGGAAGAGGCGAAACATAATCAACTTGAATTCGGGACAGCTATTCGAAATCTTAGTGAAAGACTGGATTTGTTATCTCAT
GTTTGCTTTTCGTGAAAAAATACCAATTGAAGTGGAGGGCTTCTTCAAACAACAAGGAGCTGGGTCAACTATTCAATCAAATGATATTGAGCATGTTTCCCATCTCTTCT
CGAGAAACAAGTGGGCTATTTCTTTGCAAAATTGTGCTCAATTTCATATGTGGCAATTCCGCCAAGATCTCTTCTTTAGTTGGGGAAGAATCCGCACAAATCGGATTTTT
GAGGAACATATCGAGAGAGAATTGGATTTGGTTAGACAATGTGTGGTTGGTAAACAAGGATCGATCGATTCTTTGGGATCCTTCCTTTCTTCAAACGGAACGAACAGAGA
TAGAATCAGACCGATTCCTAAATGCTTTTCTGGATATTCCTCAATGTCCCGGCTATTCACGGAACGTGAGAAGCAGATGAATAATCATCCGCTTCCGGAAGAAATCGAAG
AATTTCTCAGGAATCCTACAAGATCCATTCGTTCTTTTTCTCTGACAGATGGTCAGAACTTCATATGGGTTCGAATCCTATTGAGAGGTCCACTAGAGATCAGAAATTGT
TGA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MNFIGPRNDTLEESFGSSNINRLIVSLLYLPKGKKISESCFLDPKKECIMPESNWGSRWWRNWIGKKRDSSCKISNETVAGIEISFKEKDIKYLEFLFVYYMDDQIRKDH
DWELFDRLSPRKRRNIINLNSGQLFEILVKDWICYLMFAFREKIPIEVEGFFKQQGAGSTIQSNDIEHVSHLFSRNKWAISLQNCAQFHMWQFRQDLFFSWGRIRTNRIF
EEHIERELDLVRQCVVGKQGSIDSLGSFLSSNGTNRDRIRPIPKCFSGYSSMSRLFTEREKQMNNHPLPEEIEEFLRNPTRSIRSFSLTDGQNFIWVRILLRGPLEIRNC

Sed0008047 (gene) of Chayote v1 genome