CuGenDBv2

Gene ID	Sed0008051
Organism	Sechium edule (Chayote v1)
Description	ER membrane protein complex subunit 6
Genome location	LG02:48469604..48474418
RNA-Seq Expression	Sed0008051
Synteny	Sed0008051
Gene Ontology terms	GO:0000045 - autophagosome assembly (biological process) GO:0072546 - ER membrane protein complex (cellular component)
InterPro domains	IPR008504 - ER membrane protein complex subunit 6 IPR029008 - Rab5-interacting protein family

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6597582.1 ER membrane protein complex subunit 6, partial [Cucurbita argyrosperma subsp. sororia]

6.3e-52

92.44

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Query:  MAGFSSTASEKKSSEAADDLPIFNAENLQSNLKIIYYSRTFLSIIGGVIAGILGFTSLTGFIFYFLVMGITSLGLAAKAGFSFHSYFESWNQILLDGFLS
        MAG+SS ASEKKSS+A DD+PI NAENLQ+NLKIIYYSRTFLSIIGGVIAGILGFTSLTGFIFYFLVM ITS+GLAAKAGFSFHSYFESWNQILLDGFLS
Subjt:  MAGFSSTASEKKSSEAADDLPIFNAENLQSNLKIIYYSRTFLSIIGGVIAGILGFTSLTGFIFYFLVMGITSLGLAAKAGFSFHSYFESWNQILLDGFLS

Query:  GLMSFVLFWTFAYDIVHIF
        GLMSFVLFWTFAYDIVHIF
Subjt:  GLMSFVLFWTFAYDIVHIF

XP_008450632.1 PREDICTED: ER membrane protein complex subunit 6 [Cucumis melo]

1.0e-49

89.92

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Query:  MAGFSSTASEKKSSEAADDLPIFNAENLQSNLKIIYYSRTFLSIIGGVIAGILGFTSLTGFIFYFLVMGITSLGLAAKAGFSFHSYFESWNQILLDGFLS
        MAG+SSTAS+KKSS++ADD+PIFNAENLQ+NLKIIYYSRTFLSIIGGVIAGILGFT LTGFIFYFLVM ITS+ LAAKAGFSFHSYFES NQILLDGFL 
Subjt:  MAGFSSTASEKKSSEAADDLPIFNAENLQSNLKIIYYSRTFLSIIGGVIAGILGFTSLTGFIFYFLVMGITSLGLAAKAGFSFHSYFESWNQILLDGFLS

Query:  GLMSFVLFWTFAYDIVHIF
        GLMSFVLFWTFAYDIVHIF
Subjt:  GLMSFVLFWTFAYDIVHIF

XP_022137968.1 ER membrane protein complex subunit 6 [Momordica charantia]

4.8e-52

93.28

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Query:  MAGFSSTASEKKSSEAADDLPIFNAENLQSNLKIIYYSRTFLSIIGGVIAGILGFTSLTGFIFYFLVMGITSLGLAAKAGFSFHSYFESWNQILLDGFLS
        MAG+SS ASEKKS+EAADD+PIFNAENLQ+NLKIIYYSRTFLSIIGGVIAGILGFT LTGFI YFLVM ITSLGLAAKAGFSFHSYFESWNQILLDGFLS
Subjt:  MAGFSSTASEKKSSEAADDLPIFNAENLQSNLKIIYYSRTFLSIIGGVIAGILGFTSLTGFIFYFLVMGITSLGLAAKAGFSFHSYFESWNQILLDGFLS

Query:  GLMSFVLFWTFAYDIVHIF
        GLMSFVLFWTFAYDIVHIF
Subjt:  GLMSFVLFWTFAYDIVHIF

XP_022937062.1 ER membrane protein complex subunit 6 [Cucurbita moschata]

6.3e-52

92.44

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Query:  MAGFSSTASEKKSSEAADDLPIFNAENLQSNLKIIYYSRTFLSIIGGVIAGILGFTSLTGFIFYFLVMGITSLGLAAKAGFSFHSYFESWNQILLDGFLS
        MAG+SS ASEKKSS+A DD+PI NAENLQ+NLKIIYYSRTFLSIIGGVIAGILGFTSLTGFIFYFLVM ITS+GLAAKAGFSFHSYFESWNQILLDGFLS
Subjt:  MAGFSSTASEKKSSEAADDLPIFNAENLQSNLKIIYYSRTFLSIIGGVIAGILGFTSLTGFIFYFLVMGITSLGLAAKAGFSFHSYFESWNQILLDGFLS

Query:  GLMSFVLFWTFAYDIVHIF
        GLMSFVLFWTFAYDIVHIF
Subjt:  GLMSFVLFWTFAYDIVHIF

XP_022972030.1 ER membrane protein complex subunit 6 [Cucurbita maxima]

3.7e-52

93.28

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Query:  MAGFSSTASEKKSSEAADDLPIFNAENLQSNLKIIYYSRTFLSIIGGVIAGILGFTSLTGFIFYFLVMGITSLGLAAKAGFSFHSYFESWNQILLDGFLS
        MAG+SS ASEKKSS+A DDLPI NAENLQ+NLKIIYYSRTFLSIIGGVIAGILGFTSLTGFIFYFLVM ITS+GLAAKAGFSFHSYFESWNQILLDGFLS
Subjt:  MAGFSSTASEKKSSEAADDLPIFNAENLQSNLKIIYYSRTFLSIIGGVIAGILGFTSLTGFIFYFLVMGITSLGLAAKAGFSFHSYFESWNQILLDGFLS

Query:  GLMSFVLFWTFAYDIVHIF
        GLMSFVLFWTFAYDIVHIF
Subjt:  GLMSFVLFWTFAYDIVHIF

TrEMBL top hits

e value

%identity

Alignment

A0A1S3BQB0 ER membrane protein complex subunit 6

4.9e-50

89.92

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Query:  MAGFSSTASEKKSSEAADDLPIFNAENLQSNLKIIYYSRTFLSIIGGVIAGILGFTSLTGFIFYFLVMGITSLGLAAKAGFSFHSYFESWNQILLDGFLS
        MAG+SSTAS+KKSS++ADD+PIFNAENLQ+NLKIIYYSRTFLSIIGGVIAGILGFT LTGFIFYFLVM ITS+ LAAKAGFSFHSYFES NQILLDGFL 
Subjt:  MAGFSSTASEKKSSEAADDLPIFNAENLQSNLKIIYYSRTFLSIIGGVIAGILGFTSLTGFIFYFLVMGITSLGLAAKAGFSFHSYFESWNQILLDGFLS

Query:  GLMSFVLFWTFAYDIVHIF
        GLMSFVLFWTFAYDIVHIF
Subjt:  GLMSFVLFWTFAYDIVHIF

A0A6J1CBS9 ER membrane protein complex subunit 6

2.3e-52

93.28

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Query:  MAGFSSTASEKKSSEAADDLPIFNAENLQSNLKIIYYSRTFLSIIGGVIAGILGFTSLTGFIFYFLVMGITSLGLAAKAGFSFHSYFESWNQILLDGFLS
        MAG+SS ASEKKS+EAADD+PIFNAENLQ+NLKIIYYSRTFLSIIGGVIAGILGFT LTGFI YFLVM ITSLGLAAKAGFSFHSYFESWNQILLDGFLS
Subjt:  MAGFSSTASEKKSSEAADDLPIFNAENLQSNLKIIYYSRTFLSIIGGVIAGILGFTSLTGFIFYFLVMGITSLGLAAKAGFSFHSYFESWNQILLDGFLS

Query:  GLMSFVLFWTFAYDIVHIF
        GLMSFVLFWTFAYDIVHIF
Subjt:  GLMSFVLFWTFAYDIVHIF

A0A6J1FFH8 ER membrane protein complex subunit 6

3.1e-52

92.44

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Query:  MAGFSSTASEKKSSEAADDLPIFNAENLQSNLKIIYYSRTFLSIIGGVIAGILGFTSLTGFIFYFLVMGITSLGLAAKAGFSFHSYFESWNQILLDGFLS
        MAG+SS ASEKKSS+A DD+PI NAENLQ+NLKIIYYSRTFLSIIGGVIAGILGFTSLTGFIFYFLVM ITS+GLAAKAGFSFHSYFESWNQILLDGFLS
Subjt:  MAGFSSTASEKKSSEAADDLPIFNAENLQSNLKIIYYSRTFLSIIGGVIAGILGFTSLTGFIFYFLVMGITSLGLAAKAGFSFHSYFESWNQILLDGFLS

Query:  GLMSFVLFWTFAYDIVHIF
        GLMSFVLFWTFAYDIVHIF
Subjt:  GLMSFVLFWTFAYDIVHIF

A0A6J1I7D9 ER membrane protein complex subunit 6

1.8e-52

93.28

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Query:  MAGFSSTASEKKSSEAADDLPIFNAENLQSNLKIIYYSRTFLSIIGGVIAGILGFTSLTGFIFYFLVMGITSLGLAAKAGFSFHSYFESWNQILLDGFLS
        MAG+SS ASEKKSS+A DDLPI NAENLQ+NLKIIYYSRTFLSIIGGVIAGILGFTSLTGFIFYFLVM ITS+GLAAKAGFSFHSYFESWNQILLDGFLS
Subjt:  MAGFSSTASEKKSSEAADDLPIFNAENLQSNLKIIYYSRTFLSIIGGVIAGILGFTSLTGFIFYFLVMGITSLGLAAKAGFSFHSYFESWNQILLDGFLS

Query:  GLMSFVLFWTFAYDIVHIF
        GLMSFVLFWTFAYDIVHIF
Subjt:  GLMSFVLFWTFAYDIVHIF

A0A6P3YTB6 ER membrane protein complex subunit 6

8.6e-47

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Query:  MAGFS-STASEKKSSEAADDLPIFNAENLQSNLKIIYYSRTFLSIIGGVIAGILGFTSLTGFIFYFLVMGITSLGLAAKAGFSFHSYFESWNQILLDGFL
        MAG + S ASEKKS+EA +DLP FNAEN+QSN+KIIYYSRTF+SIIGGVIAGILGFTSLTGFIFYFLVM ITS+GL AKAGFS HSYF SWNQI+LDGFL
Subjt:  MAGFS-STASEKKSSEAADDLPIFNAENLQSNLKIIYYSRTFLSIIGGVIAGILGFTSLTGFIFYFLVMGITSLGLAAKAGFSFHSYFESWNQILLDGFL

Query:  SGLMSFVLFWTFAYDIVHIF
         GLMSFVLFWTFAYDIVHIF
Subjt:  SGLMSFVLFWTFAYDIVHIF

SwissProt top hits

e value

%identity

Alignment

Q3ZCG8 ER membrane protein complex subunit 6

6.0e-13

40.4

Show/hide

Query:  PIFNAENLQSNLKIIYYSRTFLSIIGGVIAGILGFTSLTGFIFYFLVMGITSLGLAAKAGFSFHSYFESWNQILLDGFLSGLMSFVLFWTFAYDIVHIF
        P  +   ++ N  ++ Y RT +S + G  AGILG T L GFIFY L   + SL L  KA   ++ YF+S   +   G + GL ++VLFWTF Y +VH++
Subjt:  PIFNAENLQSNLKIIYYSRTFLSIIGGVIAGILGFTSLTGFIFYFLVMGITSLGLAAKAGFSFHSYFESWNQILLDGFLSGLMSFVLFWTFAYDIVHIF

Q68EU8 ER membrane protein complex subunit 6

1.9e-14

44.57

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Query:  LQSNLKIIYYSRTFLSIIGGVIAGILGFTSLTGFIFYFLVMGITSLGLAAKAGFSFHSYFESWNQILLDGFLSGLMSFVLFWTFAYDIVHIF
        ++ N  ++ Y RT +S + G  AGILG TSL GFIFYFL   + SL L  K+G  ++ YF+S   +   G + GL ++VLFWTF Y +VH++
Subjt:  LQSNLKIIYYSRTFLSIIGGVIAGILGFTSLTGFIFYFLVMGITSLGLAAKAGFSFHSYFESWNQILLDGFLSGLMSFVLFWTFAYDIVHIF

Q6GLC5 ER membrane protein complex subunit 6

3.2e-14

43.48

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Query:  LQSNLKIIYYSRTFLSIIGGVIAGILGFTSLTGFIFYFLVMGITSLGLAAKAGFSFHSYFESWNQILLDGFLSGLMSFVLFWTFAYDIVHIF
        ++ N  ++ Y RT +S + G  AGILG T+L GFIFYFL   + SL L  K+G  ++ YF+S   +   G + GL ++VLFWTF Y +VH++
Subjt:  LQSNLKIIYYSRTFLSIIGGVIAGILGFTSLTGFIFYFLVMGITSLGLAAKAGFSFHSYFESWNQILLDGFLSGLMSFVLFWTFAYDIVHIF

Q9BV81 ER membrane protein complex subunit 6

5.4e-14

41.41

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Query:  PIFNAENLQSNLKIIYYSRTFLSIIGGVIAGILGFTSLTGFIFYFLVMGITSLGLAAKAGFSFHSYFESWNQILLDGFLSGLMSFVLFWTFAYDIVHIF
        P  +   ++ N  ++ Y RT +S + G  AGILG T L GFIFY L   + SL L  KAG  ++ YF+S   +   G + GL ++VLFWTF Y +VH++
Subjt:  PIFNAENLQSNLKIIYYSRTFLSIIGGVIAGILGFTSLTGFIFYFLVMGITSLGLAAKAGFSFHSYFESWNQILLDGFLSGLMSFVLFWTFAYDIVHIF

Q9CQW0 ER membrane protein complex subunit 6

5.4e-14

41.41

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Query:  PIFNAENLQSNLKIIYYSRTFLSIIGGVIAGILGFTSLTGFIFYFLVMGITSLGLAAKAGFSFHSYFESWNQILLDGFLSGLMSFVLFWTFAYDIVHIF
        P  +   ++ N  ++ Y RT +S + G  AGILG T L GFIFY L   + SL L  KAG  ++ YF+S   +   G + GL ++VLFWTF Y +VH++
Subjt:  PIFNAENLQSNLKIIYYSRTFLSIIGGVIAGILGFTSLTGFIFYFLVMGITSLGLAAKAGFSFHSYFESWNQILLDGFLSGLMSFVLFWTFAYDIVHIF

Arabidopsis top hits

e value

%identity

Alignment

AT5G49540.1 Rab5-interacting family protein

1.1e-38

69.64

Show/hide

Query:  ASEKKSSEAADDLPIFNAENLQSNLKIIYYSRTFLSIIGGVIAGILGFTSLTGFIFYFLVMGITSLGLAAKAGFSFHSYFESWNQILLDGFLSGLMSFVL
        +SEK+S +   D+P F+AENLQ+NLK+I  SRTFLSII GV+AGI+GF  L GF+FYF+VM ITS+GL AKAGFS   YF+SWN++L DGFL GLMSFVL
Subjt:  ASEKKSSEAADDLPIFNAENLQSNLKIIYYSRTFLSIIGGVIAGILGFTSLTGFIFYFLVMGITSLGLAAKAGFSFHSYFESWNQILLDGFLSGLMSFVL

Query:  FWTFAYDIVHIF
        FWTFAYD+VHIF
Subjt:  FWTFAYDIVHIF

Sequences

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CDS sequence

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ATGGCTGGATTTTCGTCCACTGCTTCTGAGAAGAAATCGTCTGAGGCGGCCGACGATTTGCCGATCTTCAATGCTGAAAATTTGCAAAGCAACTTGAAGATTATATATTA
CAGCCGGACGTTTTTGTCTATAATTGGTGGAGTAATTGCTGGAATTTTGGGATTCACAAGCCTGACTGGATTTATATTCTACTTCCTAGTCATGGGAATTACTTCACTTG
GACTTGCAGCTAAGGCTGGATTCTCTTTTCATTCGTATTTTGAGAGCTGGAACCAGATTCTACTTGATGGCTTTCTGAGTGGTCTCATGTCGTTCGTGCTCTTTTGGACA
TTCGCCTACGACATCGTTCATATATTCTGA

mRNA sequence

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GCTCAACTCTAACTTGAAGACTCACAGCTGCCGCTTAAACGACGCTGTTCATAGAGCGAAACTCTACTTTTCTTCTCTCAGATCGATCACAATCAACCGTTTCTTGGCAT
TTTGTAACTTCGGATCATACACCGGCAGAATCTATGGCTGGATTTTCGTCCACTGCTTCTGAGAAGAAATCGTCTGAGGCGGCCGACGATTTGCCGATCTTCAATGCTGA
AAATTTGCAAAGCAACTTGAAGATTATATATTACAGCCGGACGTTTTTGTCTATAATTGGTGGAGTAATTGCTGGAATTTTGGGATTCACAAGCCTGACTGGATTTATAT
TCTACTTCCTAGTCATGGGAATTACTTCACTTGGACTTGCAGCTAAGGCTGGATTCTCTTTTCATTCGTATTTTGAGAGCTGGAACCAGATTCTACTTGATGGCTTTCTG
AGTGGTCTCATGTCGTTCGTGCTCTTTTGGACATTCGCCTACGACATCGTTCATATATTCTGAGTTCAGAATGCTGGCAGGAATCATCCTAAAGTAGCTGCAGCTTTCGG
TACAAATCGACTTGAGATTTGGAGTTCCAAATCAGTTAAATGACTTTTGTCCATTGAAATGATAATTAGATTGAGTTATATCATTTGATACCCACCTCCTCCTAATGACA
TTGTGATAAGTTAATTTCTAATCCTTCATTACTATGTTTAGAATCTGTTAAATTTATAAGAGTAGGATTTTTTGTGCTTTGAATCAAAATGAGCATAGATTTTGCTTATT
CTTTATTGTTTTTATCAGTTCTTGAGATTATTTGACTAAGTGTGAAACTGTACTTAATCTATCTATGGTTCTATAAATTAATTGCTGACGAGAATTCATAATGGATTGCG
G

Protein sequence

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MAGFSSTASEKKSSEAADDLPIFNAENLQSNLKIIYYSRTFLSIIGGVIAGILGFTSLTGFIFYFLVMGITSLGLAAKAGFSFHSYFESWNQILLDGFLSGLMSFVLFWT
FAYDIVHIF

Sed0008051 (gene) of Chayote v1 genome