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Sed0008088 (gene) of Chayote v1 genome

Gene IDSed0008088
OrganismSechium edule (Chayote v1)
DescriptionStress response protein nst1
Genome locationLG01:70672837..70673019
RNA-Seq ExpressionSed0008088
SyntenySed0008088
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8650841.1 hypothetical protein Csa_017605, partial [Cucumis sativus]5.7e-0972.73Show/hide
Query:  MEEDRLYGMGSVLIMLVVAGLVLFLPLVIGTLQPPSGLVLFLFPVILAVVFICLA
        MEE  ++GMGSVLIMLVV GLVL LPLVIG+LQPPSG +L LFPV LA VF  L+
Subjt:  MEEDRLYGMGSVLIMLVVAGLVLFLPLVIGTLQPPSGLVLFLFPVILAVVFICLA
KAG7011309.1 hypothetical protein SDJN02_26213, partial [Cucurbita argyrosperma subsp. argyrosperma]3.3e-0966.67Show/hide
Query:  MEEDRLYGMGSVLIMLVVAGLVLFLPLVIGTLQPPSGLVLFLFPVILAVVFICLAFASSD
        M E+ + GMGSVLIMLVV G +LFLPLVIG++QPPSGL+L +FPV LA VF  L+ ASS+
Subjt:  MEEDRLYGMGSVLIMLVVAGLVLFLPLVIGTLQPPSGLVLFLFPVILAVVFICLAFASSD
XP_008447644.1 PREDICTED: uncharacterized protein LOC103490051 [Cucumis melo]1.8e-1072.88Show/hide
Query:  MEEDRLYGMGSVLIMLVVAGLVLFLPLVIGTLQPPSGLVLFLFPVILAVVFICLAFASS
        MEE  ++GMGSVLIMLVV GLVLFLPL+IG+LQPPSG +L LFPV LA VF  L+ ASS
Subjt:  MEEDRLYGMGSVLIMLVVAGLVLFLPLVIGTLQPPSGLVLFLFPVILAVVFICLAFASS
XP_011652820.1 uncharacterized protein LOC105435116 [Cucumis sativus]5.1e-1072.88Show/hide
Query:  MEEDRLYGMGSVLIMLVVAGLVLFLPLVIGTLQPPSGLVLFLFPVILAVVFICLAFASS
        MEE  ++GMGSVLIMLVV GLVL LPLVIG+LQPPSG +L LFPV LA VF  L+ ASS
Subjt:  MEEDRLYGMGSVLIMLVVAGLVLFLPLVIGTLQPPSGLVLFLFPVILAVVFICLAFASS
XP_038888108.1 uncharacterized protein LOC120078008 [Benincasa hispida]3.9e-1071.19Show/hide
Query:  MEEDRLYGMGSVLIMLVVAGLVLFLPLVIGTLQPPSGLVLFLFPVILAVVFICLAFASS
        ME+  ++GMGSVL+MLVV GLVLFLPLVIG+LQPPSGL+L +FPV LA VF  L+ ASS
Subjt:  MEEDRLYGMGSVLIMLVVAGLVLFLPLVIGTLQPPSGLVLFLFPVILAVVFICLAFASS
TrEMBL top hitse value%identityAlignment
A0A1S3BHY2 uncharacterized protein LOC1034900518.5e-1172.88Show/hide
Query:  MEEDRLYGMGSVLIMLVVAGLVLFLPLVIGTLQPPSGLVLFLFPVILAVVFICLAFASS
        MEE  ++GMGSVLIMLVV GLVLFLPL+IG+LQPPSG +L LFPV LA VF  L+ ASS
Subjt:  MEEDRLYGMGSVLIMLVVAGLVLFLPLVIGTLQPPSGLVLFLFPVILAVVFICLAFASS
A0A2P5EXP0 Uncharacterized protein7.7e-0451.72Show/hide
Query:  EEDRLYGMGSVLIMLVVAGLVLFLPLVIGTLQPPSGLVLFLFPVILAVVFICLAFASS
        +++ + G+ SV+++LVVA L+LFLPL +G +QPPS   L +FP++L VVFI L+ ASS
Subjt:  EEDRLYGMGSVLIMLVVAGLVLFLPLVIGTLQPPSGLVLFLFPVILAVVFICLAFASS
A0A5A7T8Q7 Stress response protein nst18.5e-1172.88Show/hide
Query:  MEEDRLYGMGSVLIMLVVAGLVLFLPLVIGTLQPPSGLVLFLFPVILAVVFICLAFASS
        MEE  ++GMGSVLIMLVV GLVLFLPL+IG+LQPPSG +L LFPV LA VF  L+ ASS
Subjt:  MEEDRLYGMGSVLIMLVVAGLVLFLPLVIGTLQPPSGLVLFLFPVILAVVFICLAFASS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G14315.1 unknown protein9.0e-0548.08Show/hide
Query:  YGMGSVLIMLVVAGLVLFLPLVIGTLQPPSGLVLFLFPVILAVVFICLAFAS
        +GMGSVL ++VVA ++LF+PL++G +  PS  ++ +FPV+L  VF+ L F S
Subjt:  YGMGSVLIMLVVAGLVLFLPLVIGTLQPPSGLVLFLFPVILAVVFICLAFAS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGAAGATAGGCTGTATGGGATGGGGAGTGTGTTGATAATGCTTGTAGTGGCTGGTTTGGTTTTGTTTCTGCCGCTGGTGATCGGAACACTTCAGCCGCCGTCCGG
CCTTGTGCTGTTCCTTTTTCCGGTCATTCTCGCGGTGGTGTTCATCTGTCTCGCATTCGCATCCTCCGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGAAGATAGGCTGTATGGGATGGGGAGTGTGTTGATAATGCTTGTAGTGGCTGGTTTGGTTTTGTTTCTGCCGCTGGTGATCGGAACACTTCAGCCGCCGTCCGG
CCTTGTGCTGTTCCTTTTTCCGGTCATTCTCGCGGTGGTGTTCATCTGTCTCGCATTCGCATCCTCCGATTGA
Protein sequenceShow/hide protein sequence
MEEDRLYGMGSVLIMLVVAGLVLFLPLVIGTLQPPSGLVLFLFPVILAVVFICLAFASSD