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Sed0008097 (gene) of Chayote v1 genome

Gene IDSed0008097
OrganismSechium edule (Chayote v1)
DescriptionAnaphase-promoting complex subunit 11
Genome locationLG07:43164322..43166509
RNA-Seq ExpressionSed0008097
SyntenySed0008097
Gene Ontology termsGO:0016567 - protein ubiquitination (biological process)
GO:0031145 - anaphase-promoting complex-dependent catabolic process (biological process)
GO:0045842 - positive regulation of mitotic metaphase/anaphase transition (biological process)
GO:0051301 - cell division (biological process)
GO:0005680 - anaphase-promoting complex (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0008270 - zinc ion binding (molecular function)
GO:0061630 - ubiquitin protein ligase activity (molecular function)
GO:0097602 - cullin family protein binding (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type
IPR024991 - Anaphase-promoting complex subunit 11, RING-H2 finger


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF5463601.1 hypothetical protein F2P56_013763 [Juglans regia]4.7e-4791.3Show/hide
Query:  MKVKILRIHCISVYLWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKE
        MKVK+LRI    + LWHAVASWTW+AQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKE
Subjt:  MKVKILRIHCISVYLWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKE

KAF5463602.1 hypothetical protein F2P56_013763 [Juglans regia]1.1e-4690.32Show/hide
Query:  MKVKILRIHCIS-VYLWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKE
        MKVK+LR    S +Y WHAVASWTW+AQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKE
Subjt:  MKVKILRIHCIS-VYLWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKE

NP_001189819.1 anaphase-promoting complex/cyclosome 11 [Arabidopsis thaliana]6.2e-4792.39Show/hide
Query:  MKVKILRIHCISVYLWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKE
        MKVKILRI      LWHAVASWTW+AQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKE
Subjt:  MKVKILRIHCISVYLWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKE

XP_035547557.1 anaphase-promoting complex subunit 11 isoform X7 [Juglans regia]1.1e-4690.32Show/hide
Query:  MKVKILRIHCIS-VYLWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKE
        MKVK+LR    S +Y WHAVASWTW+AQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKE
Subjt:  MKVKILRIHCIS-VYLWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKE

XP_035547560.1 anaphase-promoting complex subunit 11 isoform X8 [Juglans regia]4.7e-4791.3Show/hide
Query:  MKVKILRIHCISVYLWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKE
        MKVK+LRI    + LWHAVASWTW+AQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKE
Subjt:  MKVKILRIHCISVYLWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKE

TrEMBL top hitse value%identityAlignment
A0A1I9LLE4 Anaphase-promoting complex subunit 113.0e-4792.39Show/hide
Query:  MKVKILRIHCISVYLWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKE
        MKVKILRI      LWHAVASWTW+AQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKE
Subjt:  MKVKILRIHCISVYLWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKE

A0A2I4HDN9 Anaphase-promoting complex subunit 115.1e-4790.32Show/hide
Query:  MKVKILRIHCIS-VYLWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKE
        MKVK+LR    S +Y WHAVASWTW+AQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKE
Subjt:  MKVKILRIHCIS-VYLWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKE

A0A2I4HDV5 Anaphase-promoting complex subunit 112.3e-4791.3Show/hide
Query:  MKVKILRIHCISVYLWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKE
        MKVK+LRI    + LWHAVASWTW+AQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKE
Subjt:  MKVKILRIHCISVYLWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKE

A0A2I4HJW5 Anaphase-promoting complex subunit 111.1e-4687.63Show/hide
Query:  MKVKILRIHCI----SVYL-WHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKE
        MKVK+LRI  +    S+Y+ WHAVASWTW+AQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKE
Subjt:  MKVKILRIHCI----SVYL-WHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKE

D7MN37 Anaphase-promoting complex subunit 113.0e-4792.39Show/hide
Query:  MKVKILRIHCISVYLWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKE
        MKVKILRI      LWHAVASWTW+AQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKE
Subjt:  MKVKILRIHCISVYLWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKE

SwissProt top hitse value%identityAlignment
Q3ZCF6 Anaphase-promoting complex subunit 113.5e-3768.29Show/hide
Query:  ISVYLWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKE
        + +  W+ VA+W W A DE CGICRMAF+GCCPDCK+PGDDCPL+WG C+H FH+HCILKW+N+Q  Q HCPMCR+EW+FKE
Subjt:  ISVYLWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKE

Q5R8A2 Anaphase-promoting complex subunit 111.3e-3667.07Show/hide
Query:  ISVYLWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKE
        + +  W+ VA+W W A DE CGICRMAF+GCCPDCK+PGDDCPL+WG C+H FH+HCILKW+++Q  Q HCPMCR+EW+FKE
Subjt:  ISVYLWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKE

Q9CPX9 Anaphase-promoting complex subunit 113.5e-3768.29Show/hide
Query:  ISVYLWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKE
        + +  W+ VA+W W A DE CGICRMAF+GCCPDCK+PGDDCPL+WG C+H FH+HCILKW+N+Q  Q HCPMCR+EW+FKE
Subjt:  ISVYLWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKE

Q9M9L0 Anaphase-promoting complex subunit 112.6e-4889.13Show/hide
Query:  MKVKILRIHCISVYLWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKE
        MKVKIL+        WHAVASWTW+AQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKE
Subjt:  MKVKILRIHCISVYLWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKE

Q9NYG5 Anaphase-promoting complex subunit 111.3e-3667.07Show/hide
Query:  ISVYLWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKE
        + +  W+ VA+W W A DE CGICRMAF+GCCPDCK+PGDDCPL+WG C+H FH+HCILKW+++Q  Q HCPMCR+EW+FKE
Subjt:  ISVYLWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKE

Arabidopsis top hitse value%identityAlignment
AT3G05870.1 anaphase-promoting complex/cyclosome 115.7e-5192.39Show/hide
Query:  MKVKILRIHCISVYLWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKE
        MKVKILRI      LWHAVASWTW+AQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKE
Subjt:  MKVKILRIHCISVYLWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKE

AT3G05870.2 anaphase-promoting complex/cyclosome 115.7e-5192.39Show/hide
Query:  MKVKILRIHCISVYLWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKE
        MKVKILRI      LWHAVASWTW+AQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKE
Subjt:  MKVKILRIHCISVYLWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKE

AT3G42830.1 RING/U-box superfamily protein4.3e-1439.02Show/hide
Query:  WHAVASWTWNAQDETCGICRMAFDGCCPDC-----KLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKE
        W AVA W W+   + C ICR      C +C         ++C + WG CNHAFH HCI +W+  +T Q  CP+   EW+F++
Subjt:  WHAVASWTWNAQDETCGICRMAFDGCCPDC-----KLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKE

AT5G20570.1 RING-box 18.7e-1539.02Show/hide
Query:  WHAVASWTWNAQDETCGICRMAFDGCCPDCK-----LPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKE
        W AVA W W+   + C ICR      C +C+        ++C + WG CNHAFH HCI +W+  +T Q  CP+   EW+F++
Subjt:  WHAVASWTWNAQDETCGICRMAFDGCCPDCK-----LPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKE

AT5G26640.1 BEST Arabidopsis thaliana protein match is: anaphase-promoting complex/cyclosome 11 (TAIR:AT3G05870.2)2.4e-1281.25Show/hide
Query:  TWNAQDETCGICRMAFDGCCPDCKLPGDDCPL
        TW+AQDETCG+CRM FD  CPDCKLP DDCPL
Subjt:  TWNAQDETCGICRMAFDGCCPDCKLPGDDCPL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGTAAAAATTTTGCGTATCCATTGTATATCTGTTTACCTGTGGCATGCTGTTGCATCATGGACTTGGAATGCTCAAGATGAAACATGTGGAATTTGTAGGATGGC
TTTTGATGGTTGTTGCCCTGATTGCAAACTTCCTGGAGATGATTGCCCATTGATTTGGGGTGCATGCAACCATGCTTTTCATCTTCATTGCATCCTCAAATGGGTGAATT
CACAGACATCTCAAGCACATTGCCCCATGTGCCGTAGAGAATGGCAATTCAAGGAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAAGTAAAAATTTTGCGTATCCATTGTATATCTGTTTACCTGTGGCATGCTGTTGCATCATGGACTTGGAATGCTCAAGATGAAACATGTGGAATTTGTAGGATGGC
TTTTGATGGTTGTTGCCCTGATTGCAAACTTCCTGGAGATGATTGCCCATTGATTTGGGGTGCATGCAACCATGCTTTTCATCTTCATTGCATCCTCAAATGGGTGAATT
CACAGACATCTCAAGCACATTGCCCCATGTGCCGTAGAGAATGGCAATTCAAGGAGTGA
Protein sequenceShow/hide protein sequence
MKVKILRIHCISVYLWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKE