CuGenDBv2

Gene ID	Sed0008103
Organism	Sechium edule (Chayote v1)
Description	RanBP2-type zinc finger protein
Genome location	LG06:42315156..42320334
RNA-Seq Expression	Sed0008103
Synteny	Sed0008103
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component) GO:0046872 - metal ion binding (molecular function)
InterPro domains	IPR001876 - Zinc finger, RanBP2-type IPR036443 - Zinc finger, RanBP2-type superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6573592.1 RanBP2-type zinc finger protein, partial [Cucurbita argyrosperma subsp. sororia]

4.8e-143

87.37

Show/hide

Query:  MSQVDSRNSSAAKRARTDGSRREDDWTCPMCGNVNFSFRTTCNMRNCTQPRPADHNPKFAAKLVQAPQGYSYSAPYMNSGAPSSMYPGIPPYGSSLFNGS
        MSQVDSRNSSAAKRARTDGSRREDDWTCP CGNVNFSFRTTCNMRNCTQPRPADHN K AAK V APQGYSYSAPYM SGAPSSMYPGIPPYGSS+FNGS
Subjt:  MSQVDSRNSSAAKRARTDGSRREDDWTCPMCGNVNFSFRTTCNMRNCTQPRPADHNPKFAAKLVQAPQGYSYSAPYMNSGAPSSMYPGIPPYGSSLFNGS

Query:  SIPPYDVPYSGGPALHYNYGSRYSAGSPYRPL----PAPYSSGSMMGNSGVYGMPPIVDRYGMPLTIGPGTMGPRPVFFSDDMSQKKSADTSRDNDWPCP
        SIPPYDVP+SGG A HYNYGSR+SAGSPYRPL    PAPYSSGS+MGNS VYGMPPI+DRYG+ L +GPGTMGPRP FF DDMSQKK AD +RDNDWPCP
Subjt:  SIPPYDVPYSGGPALHYNYGSRYSAGSPYRPL----PAPYSSGSMMGNSGVYGMPPIVDRYGMPLTIGPGTMGPRPVFFSDDMSQKKSADTSRDNDWPCP

Query:  KCGNINFSFRSVCNMRKCNTPKPGSQGSSNEKNSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSQSPTQDEDEQ
        KCGNINFSFR+VCNMRKCNTPKPGSQG  N+K SKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKS SP QDED +
Subjt:  KCGNINFSFRSVCNMRKCNTPKPGSQGSSNEKNSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSQSPTQDEDEQ

XP_004135329.1 ranBP2-type zinc finger protein At1g67325 [Cucumis sativus]

5.3e-142

86.67

Show/hide

Query:  MSQVDSRNSSAAKRARTDGSRREDDWTCPMCGNVNFSFRTTCNMRNCTQPRPADHNPKFAAKLVQAPQGYSYSAPYMNSGAPSSMYPGIPPYGSSLFNGS
        MSQVDSRNSSAAKRARTDGSRREDDWTCP CGNVNFSFRTTCNMRNCTQPRPADHN K AAK VQAPQGYSYSAPYM SGAPSSMYPG+PPYGSS+FNGS
Subjt:  MSQVDSRNSSAAKRARTDGSRREDDWTCPMCGNVNFSFRTTCNMRNCTQPRPADHNPKFAAKLVQAPQGYSYSAPYMNSGAPSSMYPGIPPYGSSLFNGS

Query:  SIPPYDVPYSGGPALHYNYGSRYSAGSPYRPL----PAPYSSGSMMGNSGVYGMPPIVDRYGMPLTIGPGTMGPRPVFFSDDMSQKKSADTSRDNDWPCP
        SIPPYDVP+SGG A HYNYGSR+SAGSPYRPL    PAPYSSGSMMGNS VYG+PPI+DRYGM L +GPG MGPRP FF D+MSQKK ADT+RDNDW CP
Subjt:  SIPPYDVPYSGGPALHYNYGSRYSAGSPYRPL----PAPYSSGSMMGNSGVYGMPPIVDRYGMPLTIGPGTMGPRPVFFSDDMSQKKSADTSRDNDWPCP

Query:  KCGNINFSFRSVCNMRKCNTPKPGSQGSSNEKNSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSQSPTQDEDEQ
        KCGNINFSFR+VCNMRKCNTPKPGSQ S N+K+SKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKS SP Q+E++Q
Subjt:  KCGNINFSFRSVCNMRKCNTPKPGSQGSSNEKNSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSQSPTQDEDEQ

XP_022945886.1 ranBP2-type zinc finger protein At1g67325-like isoform X1 [Cucurbita moschata]

1.8e-142

86.67

Show/hide

Query:  MSQVDSRNSSAAKRARTDGSRREDDWTCPMCGNVNFSFRTTCNMRNCTQPRPADHNPKFAAKLVQAPQGYSYSAPYMNSGAPSSMYPGIPPYGSSLFNGS
        MSQVDSRNSSAAKRARTDGSRREDDWTCP CGNVNFSFRTTCNMRNCTQPRPADHN K AAK V APQGYSYSAPYM SGAPSSMYPG+PPYGSS+FNGS
Subjt:  MSQVDSRNSSAAKRARTDGSRREDDWTCPMCGNVNFSFRTTCNMRNCTQPRPADHNPKFAAKLVQAPQGYSYSAPYMNSGAPSSMYPGIPPYGSSLFNGS

Query:  SIPPYDVPYSGGPALHYNYGSRYSAGSPYRPL----PAPYSSGSMMGNSGVYGMPPIVDRYGMPLTIGPGTMGPRPVFFSDDMSQKKSADTSRDNDWPCP
        SIPPYDVP+SGG A HYNYGSR+SAGSPYRPL    PAPYSSGS+MGNS VYGMPPI+DRYG+ L +GPGTMGPRP FF DD+SQKK AD +RDNDWPCP
Subjt:  SIPPYDVPYSGGPALHYNYGSRYSAGSPYRPL----PAPYSSGSMMGNSGVYGMPPIVDRYGMPLTIGPGTMGPRPVFFSDDMSQKKSADTSRDNDWPCP

Query:  KCGNINFSFRSVCNMRKCNTPKPGSQGSSNEKNSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSQSPTQDEDEQ
        KCGNINFSFR+VCNMRKCNTPKPGSQG  N+K SKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKS SP QDED +
Subjt:  KCGNINFSFRSVCNMRKCNTPKPGSQGSSNEKNSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSQSPTQDEDEQ

XP_022966809.1 ranBP2-type zinc finger protein At1g67325-like isoform X1 [Cucurbita maxima]

4.8e-143

87.02

Show/hide

Query:  MSQVDSRNSSAAKRARTDGSRREDDWTCPMCGNVNFSFRTTCNMRNCTQPRPADHNPKFAAKLVQAPQGYSYSAPYMNSGAPSSMYPGIPPYGSSLFNGS
        MSQVDSRNSSAAKRARTDGSRREDDWTCP CGNVNFSFRTTCNMRNCTQPRPADHN K AAK V APQGYSYSAPYM SGAPSSMYPG+PPYGSS+FNGS
Subjt:  MSQVDSRNSSAAKRARTDGSRREDDWTCPMCGNVNFSFRTTCNMRNCTQPRPADHNPKFAAKLVQAPQGYSYSAPYMNSGAPSSMYPGIPPYGSSLFNGS

Query:  SIPPYDVPYSGGPALHYNYGSRYSAGSPYRPL----PAPYSSGSMMGNSGVYGMPPIVDRYGMPLTIGPGTMGPRPVFFSDDMSQKKSADTSRDNDWPCP
        SIPPYDVP+SGG A HYNYGSR+SAGSPYRPL    PAPYSSGS+MGNS VYGMPPI+DRYG+ L +GPGTMGPRP FF DDMSQKK AD +RDNDWPCP
Subjt:  SIPPYDVPYSGGPALHYNYGSRYSAGSPYRPL----PAPYSSGSMMGNSGVYGMPPIVDRYGMPLTIGPGTMGPRPVFFSDDMSQKKSADTSRDNDWPCP

Query:  KCGNINFSFRSVCNMRKCNTPKPGSQGSSNEKNSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSQSPTQDEDEQ
        KCGNINFSFR+VCNMRKCNTPKPGSQG  N+K SKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKS SP QDED +
Subjt:  KCGNINFSFRSVCNMRKCNTPKPGSQGSSNEKNSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSQSPTQDEDEQ

XP_023543009.1 ranBP2-type zinc finger protein At1g67325-like isoform X1 [Cucurbita pepo subsp. pepo]

6.3e-143

87.02

Show/hide

Query:  MSQVDSRNSSAAKRARTDGSRREDDWTCPMCGNVNFSFRTTCNMRNCTQPRPADHNPKFAAKLVQAPQGYSYSAPYMNSGAPSSMYPGIPPYGSSLFNGS
        MSQVDSRNSSAAKRARTDGSRREDDWTCP CGNVNFSFRTTCNMRNCTQPRPADHN K AAK V APQGYSYSAPYM SGAPSSMYPG+PPYGSS+FNGS
Subjt:  MSQVDSRNSSAAKRARTDGSRREDDWTCPMCGNVNFSFRTTCNMRNCTQPRPADHNPKFAAKLVQAPQGYSYSAPYMNSGAPSSMYPGIPPYGSSLFNGS

Query:  SIPPYDVPYSGGPALHYNYGSRYSAGSPYRPL----PAPYSSGSMMGNSGVYGMPPIVDRYGMPLTIGPGTMGPRPVFFSDDMSQKKSADTSRDNDWPCP
        SIPPYDVP+SGG A HYNYGSR+SAGSPYRPL    PAPYSSGS+MGNS VYGMPPI+DRYG+ L +GPGTMGPRP FF DDMSQKK AD +RDNDWPCP
Subjt:  SIPPYDVPYSGGPALHYNYGSRYSAGSPYRPL----PAPYSSGSMMGNSGVYGMPPIVDRYGMPLTIGPGTMGPRPVFFSDDMSQKKSADTSRDNDWPCP

Query:  KCGNINFSFRSVCNMRKCNTPKPGSQGSSNEKNSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSQSPTQDEDEQ
        KCGNINFSFR+VCNMRKCNTPKPGSQG  N+K SKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKS SP QDED +
Subjt:  KCGNINFSFRSVCNMRKCNTPKPGSQGSSNEKNSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSQSPTQDEDEQ

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KPV4 Uncharacterized protein

2.6e-142

86.67

Show/hide

Query:  MSQVDSRNSSAAKRARTDGSRREDDWTCPMCGNVNFSFRTTCNMRNCTQPRPADHNPKFAAKLVQAPQGYSYSAPYMNSGAPSSMYPGIPPYGSSLFNGS
        MSQVDSRNSSAAKRARTDGSRREDDWTCP CGNVNFSFRTTCNMRNCTQPRPADHN K AAK VQAPQGYSYSAPYM SGAPSSMYPG+PPYGSS+FNGS
Subjt:  MSQVDSRNSSAAKRARTDGSRREDDWTCPMCGNVNFSFRTTCNMRNCTQPRPADHNPKFAAKLVQAPQGYSYSAPYMNSGAPSSMYPGIPPYGSSLFNGS

Query:  SIPPYDVPYSGGPALHYNYGSRYSAGSPYRPL----PAPYSSGSMMGNSGVYGMPPIVDRYGMPLTIGPGTMGPRPVFFSDDMSQKKSADTSRDNDWPCP
        SIPPYDVP+SGG A HYNYGSR+SAGSPYRPL    PAPYSSGSMMGNS VYG+PPI+DRYGM L +GPG MGPRP FF D+MSQKK ADT+RDNDW CP
Subjt:  SIPPYDVPYSGGPALHYNYGSRYSAGSPYRPL----PAPYSSGSMMGNSGVYGMPPIVDRYGMPLTIGPGTMGPRPVFFSDDMSQKKSADTSRDNDWPCP

Query:  KCGNINFSFRSVCNMRKCNTPKPGSQGSSNEKNSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSQSPTQDEDEQ
        KCGNINFSFR+VCNMRKCNTPKPGSQ S N+K+SKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKS SP Q+E++Q
Subjt:  KCGNINFSFRSVCNMRKCNTPKPGSQGSSNEKNSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSQSPTQDEDEQ

A0A5A7SU69 RanBP2-type zinc finger protein

2.6e-142

86.67

Show/hide

Query:  MSQVDSRNSSAAKRARTDGSRREDDWTCPMCGNVNFSFRTTCNMRNCTQPRPADHNPKFAAKLVQAPQGYSYSAPYMNSGAPSSMYPGIPPYGSSLFNGS
        MSQVDSRNSSAAKRARTDGSRREDDWTCP CGNVNFSFRTTCNMRNCTQPRPADHN K AAK VQAPQGYSYSAPYM SGAPSSMYPG+PPYGSS+FNGS
Subjt:  MSQVDSRNSSAAKRARTDGSRREDDWTCPMCGNVNFSFRTTCNMRNCTQPRPADHNPKFAAKLVQAPQGYSYSAPYMNSGAPSSMYPGIPPYGSSLFNGS

Query:  SIPPYDVPYSGGPALHYNYGSRYSAGSPYRPL----PAPYSSGSMMGNSGVYGMPPIVDRYGMPLTIGPGTMGPRPVFFSDDMSQKKSADTSRDNDWPCP
        SIPPYDVP+SGG A HYNYGSR+SAGSPYRPL    PAPYSSGSMMGNS VYG+PPI+DRYGM L +GPG MGPRP FF D+MSQKK ADT+RDNDW CP
Subjt:  SIPPYDVPYSGGPALHYNYGSRYSAGSPYRPL----PAPYSSGSMMGNSGVYGMPPIVDRYGMPLTIGPGTMGPRPVFFSDDMSQKKSADTSRDNDWPCP

Query:  KCGNINFSFRSVCNMRKCNTPKPGSQGSSNEKNSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSQSPTQDEDEQ
        KCGNINFSFR+VCNMRKCNTPKPGSQ S N+K+SKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKS SP Q+E++Q
Subjt:  KCGNINFSFRSVCNMRKCNTPKPGSQGSSNEKNSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSQSPTQDEDEQ

A0A5D3CW31 RanBP2-type zinc finger protein

2.6e-142

86.67

Show/hide

Query:  MSQVDSRNSSAAKRARTDGSRREDDWTCPMCGNVNFSFRTTCNMRNCTQPRPADHNPKFAAKLVQAPQGYSYSAPYMNSGAPSSMYPGIPPYGSSLFNGS
        MSQVDSRNSSAAKRARTDGSRREDDWTCP CGNVNFSFRTTCNMRNCTQPRPADHN K AAK VQAPQGYSYSAPYM SGAPSSMYPG+PPYGSS+FNGS
Subjt:  MSQVDSRNSSAAKRARTDGSRREDDWTCPMCGNVNFSFRTTCNMRNCTQPRPADHNPKFAAKLVQAPQGYSYSAPYMNSGAPSSMYPGIPPYGSSLFNGS

Query:  SIPPYDVPYSGGPALHYNYGSRYSAGSPYRPL----PAPYSSGSMMGNSGVYGMPPIVDRYGMPLTIGPGTMGPRPVFFSDDMSQKKSADTSRDNDWPCP
        SIPPYDVP+SGG A HYNYGSR+SAGSPYRPL    PAPYSSGSMMGNS VYG+PPI+DRYGM L +GPG MGPRP FF D+MSQKK ADT+RDNDW CP
Subjt:  SIPPYDVPYSGGPALHYNYGSRYSAGSPYRPL----PAPYSSGSMMGNSGVYGMPPIVDRYGMPLTIGPGTMGPRPVFFSDDMSQKKSADTSRDNDWPCP

Query:  KCGNINFSFRSVCNMRKCNTPKPGSQGSSNEKNSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSQSPTQDEDEQ
        KCGNINFSFR+VCNMRKCNTPKPGSQ S N+K+SKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKS SP Q+E++Q
Subjt:  KCGNINFSFRSVCNMRKCNTPKPGSQGSSNEKNSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSQSPTQDEDEQ

A0A6J1G249 ranBP2-type zinc finger protein At1g67325-like isoform X1

8.9e-143

86.67

Show/hide

Query:  MSQVDSRNSSAAKRARTDGSRREDDWTCPMCGNVNFSFRTTCNMRNCTQPRPADHNPKFAAKLVQAPQGYSYSAPYMNSGAPSSMYPGIPPYGSSLFNGS
        MSQVDSRNSSAAKRARTDGSRREDDWTCP CGNVNFSFRTTCNMRNCTQPRPADHN K AAK V APQGYSYSAPYM SGAPSSMYPG+PPYGSS+FNGS
Subjt:  MSQVDSRNSSAAKRARTDGSRREDDWTCPMCGNVNFSFRTTCNMRNCTQPRPADHNPKFAAKLVQAPQGYSYSAPYMNSGAPSSMYPGIPPYGSSLFNGS

Query:  SIPPYDVPYSGGPALHYNYGSRYSAGSPYRPL----PAPYSSGSMMGNSGVYGMPPIVDRYGMPLTIGPGTMGPRPVFFSDDMSQKKSADTSRDNDWPCP
        SIPPYDVP+SGG A HYNYGSR+SAGSPYRPL    PAPYSSGS+MGNS VYGMPPI+DRYG+ L +GPGTMGPRP FF DD+SQKK AD +RDNDWPCP
Subjt:  SIPPYDVPYSGGPALHYNYGSRYSAGSPYRPL----PAPYSSGSMMGNSGVYGMPPIVDRYGMPLTIGPGTMGPRPVFFSDDMSQKKSADTSRDNDWPCP

Query:  KCGNINFSFRSVCNMRKCNTPKPGSQGSSNEKNSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSQSPTQDEDEQ
        KCGNINFSFR+VCNMRKCNTPKPGSQG  N+K SKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKS SP QDED +
Subjt:  KCGNINFSFRSVCNMRKCNTPKPGSQGSSNEKNSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSQSPTQDEDEQ

A0A6J1HUW6 ranBP2-type zinc finger protein At1g67325-like isoform X1

2.3e-143

87.02

Show/hide

Query:  MSQVDSRNSSAAKRARTDGSRREDDWTCPMCGNVNFSFRTTCNMRNCTQPRPADHNPKFAAKLVQAPQGYSYSAPYMNSGAPSSMYPGIPPYGSSLFNGS
        MSQVDSRNSSAAKRARTDGSRREDDWTCP CGNVNFSFRTTCNMRNCTQPRPADHN K AAK V APQGYSYSAPYM SGAPSSMYPG+PPYGSS+FNGS
Subjt:  MSQVDSRNSSAAKRARTDGSRREDDWTCPMCGNVNFSFRTTCNMRNCTQPRPADHNPKFAAKLVQAPQGYSYSAPYMNSGAPSSMYPGIPPYGSSLFNGS

Query:  SIPPYDVPYSGGPALHYNYGSRYSAGSPYRPL----PAPYSSGSMMGNSGVYGMPPIVDRYGMPLTIGPGTMGPRPVFFSDDMSQKKSADTSRDNDWPCP
        SIPPYDVP+SGG A HYNYGSR+SAGSPYRPL    PAPYSSGS+MGNS VYGMPPI+DRYG+ L +GPGTMGPRP FF DDMSQKK AD +RDNDWPCP
Subjt:  SIPPYDVPYSGGPALHYNYGSRYSAGSPYRPL----PAPYSSGSMMGNSGVYGMPPIVDRYGMPLTIGPGTMGPRPVFFSDDMSQKKSADTSRDNDWPCP

Query:  KCGNINFSFRSVCNMRKCNTPKPGSQGSSNEKNSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSQSPTQDEDEQ
        KCGNINFSFR+VCNMRKCNTPKPGSQG  N+K SKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKS SP QDED +
Subjt:  KCGNINFSFRSVCNMRKCNTPKPGSQGSSNEKNSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSQSPTQDEDEQ

SwissProt top hits

e value

%identity

Alignment

Q5ZLX5 Zinc finger Ran-binding domain-containing protein 2

4.1e-04

33.33

Show/hide

Query:  DNDWPCP--KCGNINFSFRSVCNMRKCNTPKP---------GSQ-GSSNEKNSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPAESEK
        D DW CP  KCGN+NF+ R+ CN  +C   K          G++ G +  + S+       W+C+ C N+N+  R++CN   C   K A+ E+
Subjt:  DNDWPCP--KCGNINFSFRSVCNMRKCNTPKP---------GSQ-GSSNEKNSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPAESEK

Q8GZ43 RanBP2-type zinc finger protein At1g67325

9.9e-107

66.9

Show/hide

Query:  MSQVDSRNSSAAKRARTDGSRREDDWTCPMCGNVNFSFRTTCNMRNCTQPRPADHNPKFAAKLVQAPQGYSYSAPYMNSGAPSSMYPGIPPYGSSLFNGS
        MSQVD+RNSSAAKRARTDG RREDDW CP CGNVNFSFRTTCNMRNCTQPRPADHN K A K +Q  QG+S    Y+ SG P  +Y G  PYGS LFNGS
Subjt:  MSQVDSRNSSAAKRARTDGSRREDDWTCPMCGNVNFSFRTTCNMRNCTQPRPADHNPKFAAKLVQAPQGYSYSAPYMNSGAPSSMYPGIPPYGSSLFNGS

Query:  SIPPYDVPYSGGPALHYNYGSRYSAGSPYRPL----PAPYSSGSMMGNSGVYGMPPIVDRYGMPLTIGPGT---MGPRPVFFSDDMSQKKSADTSRDNDW
        S+PPYDVP+SGG   H+NY SR  AG+ YRPL    P PY  GSMMG+ G+YGMPP +DRYG+ + +GPG+   M PRP F+ D+ SQK+  D++RDNDW
Subjt:  SIPPYDVPYSGGPALHYNYGSRYSAGSPYRPL----PAPYSSGSMMGNSGVYGMPPIVDRYGMPLTIGPGT---MGPRPVFFSDDMSQKKSADTSRDNDW

Query:  PCPKCGNINFSFRSVCNMRKCNTPKPGS-QGSSNEKNSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPAE-SEKSQSPTQDEDEQ
         CP CGN+NFSFR+VCNMRKCNTPKPGS QG S++K SKQ  PEGSWKC+ C NINYPFR+KCNRQNCGADKP + S  S S   +E++Q
Subjt:  PCPKCGNINFSFRSVCNMRKCNTPKPGS-QGSSNEKNSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPAE-SEKSQSPTQDEDEQ

Arabidopsis top hits

e value

%identity

Alignment

AT1G50300.1 TBP-associated factor 15

7.2e-04

55.56

Show/hide

Query:  DDWTCPMCGNVNFSFRTTCNMRNCTQP
        +DW CPMCGNVN++ R  CN+ N  +P
Subjt:  DDWTCPMCGNVNFSFRTTCNMRNCTQP

AT1G67325.1 Ran BP2/NZF zinc finger-like superfamily protein

2.8e-109

67.13

Show/hide

Query:  MSQVDSRNSSAAKRARTDGSRREDDWTCPMCGNVNFSFRTTCNMRNCTQPRPADHNPKFAAKLVQAPQGYSYSAPYMNSGAPSSMYPGIPPYGSSLFNGS
        MSQVD+RNSSAAKRARTDG RREDDW CP CGNVNFSFRTTCNMRNCTQPRPADHN K A K +Q  QG+S    Y+ SG P  +Y G  PYGS LFNGS
Subjt:  MSQVDSRNSSAAKRARTDGSRREDDWTCPMCGNVNFSFRTTCNMRNCTQPRPADHNPKFAAKLVQAPQGYSYSAPYMNSGAPSSMYPGIPPYGSSLFNGS

Query:  SIPPYDVPYSGGPALHYNYGSRYSAGSPYRPL----PAPYSSGSMMGNSGVYGMPPIVDRYGMPLTIGPGT---MGPRPVFFSDDMSQKKSADTSRDNDW
        S+PPYDVP+SGG   H+NY SR  AG+ YRPL    P PY  GSMMG+ G+YGMPP +DRYG+ + +GPG+   M PRP F+ D+ SQK+  D++RDNDW
Subjt:  SIPPYDVPYSGGPALHYNYGSRYSAGSPYRPL----PAPYSSGSMMGNSGVYGMPPIVDRYGMPLTIGPGT---MGPRPVFFSDDMSQKKSADTSRDNDW

Query:  PCPKCGNINFSFRSVCNMRKCNTPKPGSQGSSNEKNSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPAE-SEKSQSPTQDEDEQ
         CP CGN+NFSFR+VCNMRKCNTPKPGSQG S++K SKQ  PEGSWKC+ C NINYPFR+KCNRQNCGADKP + S  S S   +E++Q
Subjt:  PCPKCGNINFSFRSVCNMRKCNTPKPGSQGSSNEKNSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPAE-SEKSQSPTQDEDEQ

AT1G67325.2 Ran BP2/NZF zinc finger-like superfamily protein

7.0e-108

66.9

Show/hide

Query:  MSQVDSRNSSAAKRARTDGSRREDDWTCPMCGNVNFSFRTTCNMRNCTQPRPADHNPKFAAKLVQAPQGYSYSAPYMNSGAPSSMYPGIPPYGSSLFNGS
        MSQVD+RNSSAAKRARTDG RREDDW CP CGNVNFSFRTTCNMRNCTQPRPADHN K A K +Q  QG+S    Y+ SG P  +Y G  PYGS LFNGS
Subjt:  MSQVDSRNSSAAKRARTDGSRREDDWTCPMCGNVNFSFRTTCNMRNCTQPRPADHNPKFAAKLVQAPQGYSYSAPYMNSGAPSSMYPGIPPYGSSLFNGS

Query:  SIPPYDVPYSGGPALHYNYGSRYSAGSPYRPL----PAPYSSGSMMGNSGVYGMPPIVDRYGMPLTIGPGT---MGPRPVFFSDDMSQKKSADTSRDNDW
        S+PPYDVP+SGG   H+NY SR  AG+ YRPL    P PY  GSMMG+ G+YGMPP +DRYG+ + +GPG+   M PRP F+ D+ SQK+  D++RDNDW
Subjt:  SIPPYDVPYSGGPALHYNYGSRYSAGSPYRPL----PAPYSSGSMMGNSGVYGMPPIVDRYGMPLTIGPGT---MGPRPVFFSDDMSQKKSADTSRDNDW

Query:  PCPKCGNINFSFRSVCNMRKCNTPKPGS-QGSSNEKNSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPAE-SEKSQSPTQDEDEQ
         CP CGN+NFSFR+VCNMRKCNTPKPGS QG S++K SKQ  PEGSWKC+ C NINYPFR+KCNRQNCGADKP + S  S S   +E++Q
Subjt:  PCPKCGNINFSFRSVCNMRKCNTPKPGS-QGSSNEKNSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPAE-SEKSQSPTQDEDEQ

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGTCTCAGGTTGACAGCAGGAATTCCTCTGCAGCCAAACGTGCTAGAACTGATGGTAGCCGGAGGGAAGATGACTGGACTTGTCCTATGTGTGGAAACGTCAATTTTTC
ATTTAGAACAACTTGCAATATGCGCAATTGCACTCAGCCACGTCCGGCTGATCATAATCCTAAGTTTGCTGCCAAGCTTGTTCAAGCTCCTCAGGGTTACTCTTATTCTG
CCCCTTACATGAATTCTGGTGCACCCTCTTCAATGTATCCTGGCATACCGCCTTATGGTTCTTCTTTATTCAATGGTTCATCTATACCTCCCTATGATGTGCCCTATTCT
GGGGGACCAGCATTACATTATAACTATGGAAGCCGATATTCTGCAGGCAGCCCCTACAGACCTTTGCCTGCACCCTATTCTAGTGGATCTATGATGGGAAACAGTGGAGT
GTATGGTATGCCACCCATAGTGGATCGCTATGGCATGCCTTTGACCATTGGCCCTGGCACCATGGGTCCAAGACCAGTTTTTTTTTCAGATGATATGTCTCAGAAAAAGA
GTGCAGACACTTCTCGTGACAATGATTGGCCATGCCCAAAATGTGGAAACATCAACTTTTCATTTAGATCTGTCTGTAACATGAGAAAGTGTAATACGCCAAAGCCTGGG
TCACAGGGTTCCAGTAATGAAAAAAATTCTAAACAAAAGACGCCGGAGGGTAGCTGGAAGTGTGAGAAATGTAACAACATAAATTACCCATTCCGAACCAAATGCAATAG
ACAAAATTGTGGAGCTGACAAGCCAGCGGAGTCGGAGAAATCCCAATCACCTACACAGGATGAAGATGAACAGTGA

mRNA sequence

Show/hide mRNA sequence

CGCTCATTCAAGATTCCAAACGGCTTTCGTCTCCTTCATCCGACGAGCTCCGCCGTTTCCGACTGTAAAAGTTTCGCTCAGCCATTCCGATTCCAAGAACAAGATCTCAC
CGTCGTCTTCTTTCCGATAGGCCGCAATATGTCTCAGGTTGACAGCAGGAATTCCTCTGCAGCCAAACGTGCTAGAACTGATGGTAGCCGGAGGGAAGATGACTGGACTT
GTCCTATGTGTGGAAACGTCAATTTTTCATTTAGAACAACTTGCAATATGCGCAATTGCACTCAGCCACGTCCGGCTGATCATAATCCTAAGTTTGCTGCCAAGCTTGTT
CAAGCTCCTCAGGGTTACTCTTATTCTGCCCCTTACATGAATTCTGGTGCACCCTCTTCAATGTATCCTGGCATACCGCCTTATGGTTCTTCTTTATTCAATGGTTCATC
TATACCTCCCTATGATGTGCCCTATTCTGGGGGACCAGCATTACATTATAACTATGGAAGCCGATATTCTGCAGGCAGCCCCTACAGACCTTTGCCTGCACCCTATTCTA
GTGGATCTATGATGGGAAACAGTGGAGTGTATGGTATGCCACCCATAGTGGATCGCTATGGCATGCCTTTGACCATTGGCCCTGGCACCATGGGTCCAAGACCAGTTTTT
TTTTCAGATGATATGTCTCAGAAAAAGAGTGCAGACACTTCTCGTGACAATGATTGGCCATGCCCAAAATGTGGAAACATCAACTTTTCATTTAGATCTGTCTGTAACAT
GAGAAAGTGTAATACGCCAAAGCCTGGGTCACAGGGTTCCAGTAATGAAAAAAATTCTAAACAAAAGACGCCGGAGGGTAGCTGGAAGTGTGAGAAATGTAACAACATAA
ATTACCCATTCCGAACCAAATGCAATAGACAAAATTGTGGAGCTGACAAGCCAGCGGAGTCGGAGAAATCCCAATCACCTACACAGGATGAAGATGAACAGTGAGTTCTA
GAACATGTTTGAGAAGGTCCAGAGTTGTCTTCCAGCGTTGCTCAATTTGGGTGTCTGAAAGTCAGTCTTGTCGTTCTCATGTTGCAGCAGTTGTCAAGTCGGTCTACCTC
TCTTGATCCGTGTCAAGTTGTATTAACTAAATTTGTTTGCTGGTCTTTTCAAATCATTTAATGCACCATATCATCAACCGAATTGATCTGGTAAAAGACTTAATGGTTGG
TTTCTGATAATCAGGGACACATTTACTTTTCAAATTCTCTTATATAGTCTCTAGTGGGCTTGTACTTTTGAAATTCTCTTAATTGTCTTTGTGCTGTTTTTTTTTTTTTT
GAGTTCGTCCATTAGAGATTTACACTTATGTTGGTTGAGTTATTGTTCTGGTTGTCAATTGTGTTTGTGTTGATCCTTTCTTAGTATATGGTTCCAAAATTCAGAGGATG
GTTGGATTAGATAGGGTTTACCTTGTCTCGAAGGAGTAGTCTAGTAGTTGAGACTAAGGACTTCAAGACATCGCTTCCTTGAGAGATCACTAGTTTGGGGTTGTTGGAAA
GCGCTTAAACTAGAATACCTTTCGAAGTATCCCGGTGCCACAGTCTAGGGATGGGCTAGTGGTGTCACGGGTATAGGAGAGCGAAGCATCAATTTCCTGGTTTTCAAAAA
AAAAAAAAAAGATAGGGTTTTCGTTAGGCATTCATGGAATTTATGACCCATAATTGGTGGTGCCACGTCATCATTATGGCCGATAAATTTTGTTAGCATGTTTTGCCTGC
ATTACATGGTCGTCCAAAAGTAATTGTAGCCTGCCTAAGTGATGATTTGG

Protein sequence

Show/hide protein sequence

MSQVDSRNSSAAKRARTDGSRREDDWTCPMCGNVNFSFRTTCNMRNCTQPRPADHNPKFAAKLVQAPQGYSYSAPYMNSGAPSSMYPGIPPYGSSLFNGSSIPPYDVPYS
GGPALHYNYGSRYSAGSPYRPLPAPYSSGSMMGNSGVYGMPPIVDRYGMPLTIGPGTMGPRPVFFSDDMSQKKSADTSRDNDWPCPKCGNINFSFRSVCNMRKCNTPKPG
SQGSSNEKNSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSQSPTQDEDEQ

Sed0008103 (gene) of Chayote v1 genome