; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0008136 (gene) of Chayote v1 genome

Gene IDSed0008136
OrganismSechium edule (Chayote v1)
DescriptionRING-H2 finger protein ATL16-like
Genome locationLG14:3471502..3472143
RNA-Seq ExpressionSed0008136
SyntenySed0008136
Gene Ontology termsNA
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571005.1 E3 ubiquitin-protein ligase RING1-like protein, partial [Cucurbita argyrosperma subsp. sororia]1.8e-1232Show/hide
Query:  VEVPPSFSVDLFIGASKRILYVYAPYTVGYDTNTYSLPVHKLQEDLKTFEGLVEDWLYSLYITASASERIAAHVFSFLFRYFVKQRNTHVDFDAVL----
        +EV     + L  G   +I+   AP  +    + + LP +    D    +  + D L SL I A ASE I+A + SF  +   +  +T+V   AV+    
Subjt:  VEVPPSFSVDLFIGASKRILYVYAPYTVGYDTNTYSLPVHKLQEDLKTFEGLVEDWLYSLYITASASERIAAHVFSFLFRYFVKQRNTHVDFDAVL----

Query:  ----------------SINVTRETILP-------RLRMDKLEKKEEEADE-LGHCCICLDQIFNSQNIEAVKISCGHAYHKPCILTWLKSSNSNSCPLCR
                        S  V R  ++        R RM+K+E +EEE +E LG+C ICLD++   +  E ++  CGH YH+ CI  WL   NS+SCPLCR
Subjt:  ----------------SINVTRETILP-------RLRMDKLEKKEEEADE-LGHCCICLDQIFNSQNIEAVKISCGHAYHKPCILTWLKSSNSNSCPLCR

KGN66555.2 hypothetical protein Csa_007514 [Cucumis sativus]2.3e-1230.5Show/hide
Query:  RLVEVQPADK--HEV-EVPPSFSVDLFIGASKRILYVYAPYTVGYDTNTYSLPVHKLQE--DLKTFEGLVEDWLYSLYITASASERIAAHVFSFLFRYFV
        R+  V P++   H+V E+    S  L      +I++   P  + YD N + L  +      +  +F   V     SL I + ASE +A ++  FL    V
Subjt:  RLVEVQPADK--HEV-EVPPSFSVDLFIGASKRILYVYAPYTVGYDTNTYSLPVHKLQE--DLKTFEGLVEDWLYSLYITASASERIAAHVFSFLFRYFV

Query:  KQRNTHVDFDAVLSINVTRETILPRLRMD---------KLEKKEEEADELGHCCICLDQIFNSQNIEAVKISCGHAYHKPCILTWLKSSNSNSCPLCRIP
           N++  F   + I+    T +  L             + ++++  ++LG C ICLD++  S     +KISCGH YH+ CIL WL   NS+SCPLCR P
Subjt:  KQRNTHVDFDAVLSINVTRETILPRLRMD---------KLEKKEEEADELGHCCICLDQIFNSQNIEAVKISCGHAYHKPCILTWLKSSNSNSCPLCRIP

XP_022944063.1 RING-H2 finger protein ATL16-like [Cucurbita moschata]2.1e-1331.16Show/hide
Query:  VEVPPSFSVDLFIGASKRILYVYAPYTVGYDTNTYSLPVHKLQEDLKTFEGLVEDWLYSLYITASASERIAAHVFSFLFRYFVKQRNTHVDFDAVL----
        +E+     + L  G   +I+   AP  +    + + LP +    D    +  + D L SL I A ASE I+A + SF  +   +  +T+V   AV+    
Subjt:  VEVPPSFSVDLFIGASKRILYVYAPYTVGYDTNTYSLPVHKLQEDLKTFEGLVEDWLYSLYITASASERIAAHVFSFLFRYFVKQRNTHVDFDAVL----

Query:  ----------------SINVTRETILP-------RLRMDKLEKKEEEADELGHCCICLDQIFNSQNIEAVKISCGHAYHKPCILTWLKSSNSNSCPLCR
                        S  V R  ++        R RM+K+E +EEE ++LG+C ICLD++   +  E ++  CGH YH+ CI  WL   NS+SCPLCR
Subjt:  ----------------SINVTRETILP-------RLRMDKLEKKEEEADELGHCCICLDQIFNSQNIEAVKISCGHAYHKPCILTWLKSSNSNSCPLCR

XP_022985641.1 RING-H2 finger protein ATL16-like [Cucurbita maxima]6.1e-1331.66Show/hide
Query:  VEVPPSFSVDLFIGASKRILYVYAPYTVGYDTNTYSLPVHKLQEDLKTFEGLVEDWLYSLYITASASERIAAHVFSFLFRYFVKQRNTHVDFDAVL----
        +EV     + L  G   +I+   AP  +    + + LP +    D    +  + + L SL I A ASE IAA + SF  +   +  +T+V   AV+    
Subjt:  VEVPPSFSVDLFIGASKRILYVYAPYTVGYDTNTYSLPVHKLQEDLKTFEGLVEDWLYSLYITASASERIAAHVFSFLFRYFVKQRNTHVDFDAVL----

Query:  -----------------SINVTRETILP------RLRMDKLEKKEEEADELGHCCICLDQIFNSQNIEAVKISCGHAYHKPCILTWLKSSNSNSCPLCR
                         +    RE +        R RM+K+E+KEEE  +LG+C ICLD++   +  E ++  CGH YH+ CI  WL   NS+SCPLCR
Subjt:  -----------------SINVTRETILP------RLRMDKLEKKEEEADELGHCCICLDQIFNSQNIEAVKISCGHAYHKPCILTWLKSSNSNSCPLCR

XP_038883574.1 E3 ubiquitin-protein ligase RNF181-like [Benincasa hispida]3.3e-1129.53Show/hide
Query:  SVDLFIGASKRILYVYAPYTVGYDTNTYSLPVHKLQEDLKTFEGLVEDWLYSLYITASASERIAAHVFSFLFRYFVKQRNTH------VDFDAVLSIN--
        SV    G   RIL  +    + +    + L +H+LQ  L      +  +L SL I  +A E +A  + S++ R   + R ++      VDF  V+ +   
Subjt:  SVDLFIGASKRILYVYAPYTVGYDTNTYSLPVHKLQEDLKTFEGLVEDWLYSLYITASASERIAAHVFSFLFRYFVKQRNTH------VDFDAVLSIN--

Query:  -------VTRETIL------PRLRMDKLE----KKEEEADELGHCCICLDQIFNSQNIEAVKISCGHAYHKPCILTWLKSSNSNSCPLCRIPL
               +  ET++      PR  ++K+     ++ +  +ELG CCICL+++ + +  E ++I CGH YH+ C+  WL+   +NSCPLCR PL
Subjt:  -------VTRETIL------PRLRMDKLE----KKEEEADELGHCCICLDQIFNSQNIEAVKISCGHAYHKPCILTWLKSSNSNSCPLCRIPL

TrEMBL top hitse value%identityAlignment
A0A0A0LW68 RING-type domain-containing protein3.2e-1230.3Show/hide
Query:  RLVEVQPADK--HEV-EVPPSFSVDLFIGASKRILYVYAPYTVGYDTNTYSLPVHKLQE--DLKTFEGLVEDWLYSLYITASASERIAAHVFSFLFRYFV
        R+  V P++   H+V E+    S  L      +I++   P  + YD N + L  +      +  +F   V     SL I + ASE +A ++  FL    V
Subjt:  RLVEVQPADK--HEV-EVPPSFSVDLFIGASKRILYVYAPYTVGYDTNTYSLPVHKLQE--DLKTFEGLVEDWLYSLYITASASERIAAHVFSFLFRYFV

Query:  KQRNTHVDFDAVLSINVTRETILPRLRMD---------KLEKKEEEADELGHCCICLDQIFNSQNIEAVKISCGHAYHKPCILTWLKSSNSNSCPLCR
           N++  F   + I+    T +  L             + ++++  ++LG C ICLD++  S     +KISCGH YH+ CIL WL   NS+SCPLCR
Subjt:  KQRNTHVDFDAVLSINVTRETILPRLRMD---------KLEKKEEEADELGHCCICLDQIFNSQNIEAVKISCGHAYHKPCILTWLKSSNSNSCPLCR

A0A5A7TNB0 RING finger protein 165-like protein1.4e-1033.33Show/hide
Query:  EDLKTFEGLVEDWL--YSLYITASASERIAAHVFSFLFRY------FVKQRNTHVDFDAVLSINVTRETILP------------RLRMDKLEKKEEEADE
        E  ++ E LV ++L  ++L+  ASA   I   + SF  ++      F  + N     D ++     +ET  P            RLR +K +   +E +E
Subjt:  EDLKTFEGLVEDWL--YSLYITASASERIAAHVFSFLFRY------FVKQRNTHVDFDAVLSINVTRETILP------------RLRMDKLEKKEEEADE

Query:  LGHCCICLDQIFNSQNIEAVKISCGHAYHKPCILTWLKSSNSNSCPLCRIPLR
        +G C +C +++   Q  E  +I CGH YHK CILTWL+   +NSCPLCR PL+
Subjt:  LGHCCICLDQIFNSQNIEAVKISCGHAYHKPCILTWLKSSNSNSCPLCRIPLR

A0A5D3E1S5 E3 ubiquitin-protein ligase RNF181-like protein4.0e-1032.89Show/hide
Query:  VEDWLYSLYITASASERIAAHVFSFLFRYFVK--QRNTH----VDFDAVLSINVTRETI--------------------LPRLRMDKLEKKEEEADELGH
        +  +L SL I  +AS+ +A  + S + +   +   RN H    VDF  V+ + +  +++                    + + R ++L K EE+ ++LG 
Subjt:  VEDWLYSLYITASASERIAAHVFSFLFRYFVK--QRNTH----VDFDAVLSINVTRETI--------------------LPRLRMDKLEKKEEEADELGH

Query:  CCICLDQIFNSQNIEAVKISCGHAYHKPCILTWLKSSNSNSCPLCRIPL
        C ICLD++ + +  E ++I CGH YH+ CI  WLK  N NSCPLCR PL
Subjt:  CCICLDQIFNSQNIEAVKISCGHAYHKPCILTWLKSSNSNSCPLCRIPL

A0A6J1FXN0 RING-H2 finger protein ATL16-like1.0e-1331.16Show/hide
Query:  VEVPPSFSVDLFIGASKRILYVYAPYTVGYDTNTYSLPVHKLQEDLKTFEGLVEDWLYSLYITASASERIAAHVFSFLFRYFVKQRNTHVDFDAVL----
        +E+     + L  G   +I+   AP  +    + + LP +    D    +  + D L SL I A ASE I+A + SF  +   +  +T+V   AV+    
Subjt:  VEVPPSFSVDLFIGASKRILYVYAPYTVGYDTNTYSLPVHKLQEDLKTFEGLVEDWLYSLYITASASERIAAHVFSFLFRYFVKQRNTHVDFDAVL----

Query:  ----------------SINVTRETILP-------RLRMDKLEKKEEEADELGHCCICLDQIFNSQNIEAVKISCGHAYHKPCILTWLKSSNSNSCPLCR
                        S  V R  ++        R RM+K+E +EEE ++LG+C ICLD++   +  E ++  CGH YH+ CI  WL   NS+SCPLCR
Subjt:  ----------------SINVTRETILP-------RLRMDKLEKKEEEADELGHCCICLDQIFNSQNIEAVKISCGHAYHKPCILTWLKSSNSNSCPLCR

A0A6J1J8T7 RING-H2 finger protein ATL16-like2.9e-1331.66Show/hide
Query:  VEVPPSFSVDLFIGASKRILYVYAPYTVGYDTNTYSLPVHKLQEDLKTFEGLVEDWLYSLYITASASERIAAHVFSFLFRYFVKQRNTHVDFDAVL----
        +EV     + L  G   +I+   AP  +    + + LP +    D    +  + + L SL I A ASE IAA + SF  +   +  +T+V   AV+    
Subjt:  VEVPPSFSVDLFIGASKRILYVYAPYTVGYDTNTYSLPVHKLQEDLKTFEGLVEDWLYSLYITASASERIAAHVFSFLFRYFVKQRNTHVDFDAVL----

Query:  -----------------SINVTRETILP------RLRMDKLEKKEEEADELGHCCICLDQIFNSQNIEAVKISCGHAYHKPCILTWLKSSNSNSCPLCR
                         +    RE +        R RM+K+E+KEEE  +LG+C ICLD++   +  E ++  CGH YH+ CI  WL   NS+SCPLCR
Subjt:  -----------------SINVTRETILP------RLRMDKLEKKEEEADELGHCCICLDQIFNSQNIEAVKISCGHAYHKPCILTWLKSSNSNSCPLCR

SwissProt top hitse value%identityAlignment
P0CH30 E3 ubiquitin-protein ligase RING12.8e-0542Show/hide
Query:  ELGHCCICLDQIFNSQNIEAVKISCGHAYHKPCILTWLKSSNSNSCPLCR
        E   C +C+D     +  EA ++ C H YHK C+L WL+    NSCP+CR
Subjt:  ELGHCCICLDQIFNSQNIEAVKISCGHAYHKPCILTWLKSSNSNSCPLCR

P29128 E3 ubiquitin-protein ligase ICP01.8e-0442.86Show/hide
Query:  ADELGHCCICLDQIFNSQNIEAVKISCGHAYHKPCILTWLKSSNSNSCPLCRIPLR
        A ELG CCICLD I  +    A  + C HA+   CI  WL+     +CPLC+ P++
Subjt:  ADELGHCCICLDQIFNSQNIEAVKISCGHAYHKPCILTWLKSSNSNSCPLCRIPLR

Q9LF64 RING-H2 finger protein ATL521.1e-0443.48Show/hide
Query:  CCICLDQIFNSQNIEAVKISCGHAYHKPCILTWLKSSNSNSCPLCR
        C +CL +   ++++  +   C HA+H PCI TWLKS   ++CPLCR
Subjt:  CCICLDQIFNSQNIEAVKISCGHAYHKPCILTWLKSSNSNSCPLCR

Q9SPL2 E3 ubiquitin-protein ligase CIP81.4e-0433.85Show/hide
Query:  MDKLEKKEEEADELGHCCICLDQIFNSQNIEAVKISCGHAYHKPCILTWLKSSNSNSCPLCRIPL
        ++  E    E + +  C +C D +   +     K+ CGH YH  CI+ WL     NSCP+CR  L
Subjt:  MDKLEKKEEEADELGHCCICLDQIFNSQNIEAVKISCGHAYHKPCILTWLKSSNSNSCPLCRIPL

Q9SRQ8 RING-H2 finger protein ATL514.8e-0542Show/hide
Query:  ELGHCCICLDQIFNSQNIEAVKISCGHAYHKPCILTWLKSSNSNSCPLCR
        E   C +CL +   ++++  +   C HA+H PCI TWLKS   ++CPLCR
Subjt:  ELGHCCICLDQIFNSQNIEAVKISCGHAYHKPCILTWLKSSNSNSCPLCR

Arabidopsis top hitse value%identityAlignment
AT3G03550.1 RING/U-box superfamily protein3.4e-0642Show/hide
Query:  ELGHCCICLDQIFNSQNIEAVKISCGHAYHKPCILTWLKSSNSNSCPLCR
        E   C +CL +   ++++  +   C HA+H PCI TWLKS   ++CPLCR
Subjt:  ELGHCCICLDQIFNSQNIEAVKISCGHAYHKPCILTWLKSSNSNSCPLCR

AT3G15740.1 RING/U-box superfamily protein4.0e-0730.95Show/hide
Query:  HVDFDAVLSINVTRETILPRLRMDKLEKKEEEADELGHCCICLDQIFNSQNIEAVKISCGHAYHKPCILTWLKSSNSNSCPLCR
        HVD    L++    +  +  + ++ L  + E     G+C IC+D I    ++EA ++ C H +H+ C   WL+  NS  CP+CR
Subjt:  HVDFDAVLSINVTRETILPRLRMDKLEKKEEEADELGHCCICLDQIFNSQNIEAVKISCGHAYHKPCILTWLKSSNSNSCPLCR

AT3G28620.1 Zinc finger, C3HC4 type (RING finger) family protein1.3e-0840.98Show/hide
Query:  EKKEEEADELGHCCICLDQIFNSQNIEAVKISCGHAYHKPCILTWLKSSNSNSCPLCRIPL
        E ++EE +E   C ICL+ +  S++   +  +C H +H+PC+  WL   N NSCPLCR P+
Subjt:  EKKEEEADELGHCCICLDQIFNSQNIEAVKISCGHAYHKPCILTWLKSSNSNSCPLCRIPL

AT4G12140.1 RING/U-box superfamily protein8.2e-0833.33Show/hide
Query:  TRETILPRLRMDKLEKKEEEADELGHCCICLDQIFNSQNIEAVKISCGHAYHKPCILTWLKSSNSNSCPLCRIPL
        ++E+ + RL   K E+ +    E   C ICL  + +S      ++SC H +H  C++ WLK    N+CP+CR  L
Subjt:  TRETILPRLRMDKLEKKEEEADELGHCCICLDQIFNSQNIEAVKISCGHAYHKPCILTWLKSSNSNSCPLCRIPL

AT5G54990.1 RING/U-box superfamily protein2.6e-0643.48Show/hide
Query:  CCICLDQIFNSQNIEAVKISCGHAYHKPCILTWLKSSNSNSCPLCR
        C ICL ++  S  +  +K+ C H +H+ CI+TWLK   + SCP+CR
Subjt:  CCICLDQIFNSQNIEAVKISCGHAYHKPCILTWLKSSNSNSCPLCR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGAGTACGAAGTCTTAACAAAGACGTCGACCGAGTATGCGATAACGGTGAACAACAACACAATTACACGGCGACTCGTCGAAGTCCAACCGGCGGATAAACATGA
AGTTGAAGTCCCACCATCCTTTTCTGTTGATCTGTTCATCGGAGCTTCAAAGCGAATCCTCTACGTATACGCGCCGTACACAGTCGGCTACGATACTAATACGTATAGTC
TCCCTGTCCACAAATTGCAAGAAGACTTGAAGACCTTCGAGGGCTTGGTCGAGGACTGGCTGTATTCACTCTACATCACCGCCTCCGCTTCAGAGCGCATCGCCGCCCAT
GTCTTCTCCTTCCTCTTCCGATACTTCGTCAAGCAACGAAACACACACGTGGACTTCGACGCAGTGCTATCGATCAATGTTACGCGGGAAACCATCCTGCCGCGTCTAAG
AATGGACAAGTTGGAAAAGAAGGAAGAAGAAGCTGACGAGTTAGGACATTGTTGTATCTGTTTGGATCAAATATTCAATAGCCAAAACATCGAGGCCGTAAAGATTTCGT
GCGGACATGCCTATCATAAACCATGCATTCTCACTTGGCTTAAAAGTTCAAATTCCAATTCTTGCCCTTTGTGTAGAATCCCACTCCGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGTGAGTACGAAGTCTTAACAAAGACGTCGACCGAGTATGCGATAACGGTGAACAACAACACAATTACACGGCGACTCGTCGAAGTCCAACCGGCGGATAAACATGA
AGTTGAAGTCCCACCATCCTTTTCTGTTGATCTGTTCATCGGAGCTTCAAAGCGAATCCTCTACGTATACGCGCCGTACACAGTCGGCTACGATACTAATACGTATAGTC
TCCCTGTCCACAAATTGCAAGAAGACTTGAAGACCTTCGAGGGCTTGGTCGAGGACTGGCTGTATTCACTCTACATCACCGCCTCCGCTTCAGAGCGCATCGCCGCCCAT
GTCTTCTCCTTCCTCTTCCGATACTTCGTCAAGCAACGAAACACACACGTGGACTTCGACGCAGTGCTATCGATCAATGTTACGCGGGAAACCATCCTGCCGCGTCTAAG
AATGGACAAGTTGGAAAAGAAGGAAGAAGAAGCTGACGAGTTAGGACATTGTTGTATCTGTTTGGATCAAATATTCAATAGCCAAAACATCGAGGCCGTAAAGATTTCGT
GCGGACATGCCTATCATAAACCATGCATTCTCACTTGGCTTAAAAGTTCAAATTCCAATTCTTGCCCTTTGTGTAGAATCCCACTCCGTTAG
Protein sequenceShow/hide protein sequence
MGEYEVLTKTSTEYAITVNNNTITRRLVEVQPADKHEVEVPPSFSVDLFIGASKRILYVYAPYTVGYDTNTYSLPVHKLQEDLKTFEGLVEDWLYSLYITASASERIAAH
VFSFLFRYFVKQRNTHVDFDAVLSINVTRETILPRLRMDKLEKKEEEADELGHCCICLDQIFNSQNIEAVKISCGHAYHKPCILTWLKSSNSNSCPLCRIPLR