; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0008137 (gene) of Chayote v1 genome

Gene IDSed0008137
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG03:6969341..6970215
RNA-Seq ExpressionSed0008137
SyntenySed0008137
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601844.1 hypothetical protein SDJN03_07077, partial [Cucurbita argyrosperma subsp. sororia]4.1e-5074.15Show/hide
Query:  SINSAPFLLPPISPTAHRRRIR---PGTTVKSS-----QSDNNSYYAGGKLVDESMIVLRKRIHEMKMAEQSRDPPADWLDWEKRCYSDYDSHICEALGY
        S +SAP L PPISP+A RRR R   P  TV +S     Q+D+NSYYA GKLVDESMIVLRKRIHE+K AEQ+ DPP DW DWEKRCYS+YDS+ICEALGY
Subjt:  SINSAPFLLPPISPTAHRRRIR---PGTTVKSS-----QSDNNSYYAGGKLVDESMIVLRKRIHEMKMAEQSRDPPADWLDWEKRCYSDYDSHICEALGY

Query:  LQSHLMNTRPSVAVGMLALLTLSLPLSSAVVIHRFFQIAAALLAGIR
        LQSHLMNTRPSVA+GMLALLTLS+P+SSAVV+HRF +IA  LLAGIR
Subjt:  LQSHLMNTRPSVAVGMLALLTLSLPLSSAVVIHRFFQIAAALLAGIR

KAG7032552.1 hypothetical protein SDJN02_06601, partial [Cucurbita argyrosperma subsp. argyrosperma]3.1e-5074.66Show/hide
Query:  SINSAPFLLPPISPTAHRRRIR--PGTTVKSS-----QSDNNSYYAGGKLVDESMIVLRKRIHEMKMAEQSRDPPADWLDWEKRCYSDYDSHICEALGYL
        S +SAP L PPISP+A RRR R  P  TV +S     Q+D+NSYYA GKLVDESMIVLRKRIHE+K AEQ+ DPP DW DWEKRCYS+YDS+ICEALGYL
Subjt:  SINSAPFLLPPISPTAHRRRIR--PGTTVKSS-----QSDNNSYYAGGKLVDESMIVLRKRIHEMKMAEQSRDPPADWLDWEKRCYSDYDSHICEALGYL

Query:  QSHLMNTRPSVAVGMLALLTLSLPLSSAVVIHRFFQIAAALLAGIR
        QSHLMNTRPSVA+GMLALLTLS+P+SSAVV+HRF +IA  LLAGIR
Subjt:  QSHLMNTRPSVAVGMLALLTLSLPLSSAVVIHRFFQIAAALLAGIR

XP_022952614.1 uncharacterized protein LOC111455246 [Cucurbita moschata]1.7e-5175.86Show/hide
Query:  SINSAPFLLPPISPTAHRRRIR-PGTTVKSS-----QSDNNSYYAGGKLVDESMIVLRKRIHEMKMAEQSRDPPADWLDWEKRCYSDYDSHICEALGYLQ
        S +SAP L PPISP+AHRRR R P  TV +S     Q+D+NSYYA GKLVDESMIVLRKRIHE+K AEQ+ DPP DW DWEKRCYS+YDS+ICEALGYLQ
Subjt:  SINSAPFLLPPISPTAHRRRIR-PGTTVKSS-----QSDNNSYYAGGKLVDESMIVLRKRIHEMKMAEQSRDPPADWLDWEKRCYSDYDSHICEALGYLQ

Query:  SHLMNTRPSVAVGMLALLTLSLPLSSAVVIHRFFQIAAALLAGIR
        SHLMNTRPSVA+GMLALLTLS+P+SSAVV+HRF +IA  LLAGIR
Subjt:  SHLMNTRPSVAVGMLALLTLSLPLSSAVVIHRFFQIAAALLAGIR

XP_022989988.1 uncharacterized protein LOC111487016 [Cucurbita maxima]2.4e-5074.48Show/hide
Query:  SINSAPFLLPPISPTAH-RRRIRPGTTVKSS-----QSDNNSYYAGGKLVDESMIVLRKRIHEMKMAEQSRDPPADWLDWEKRCYSDYDSHICEALGYLQ
        S +SAP L PPISP++H RRR  P  TV +S     Q+D+NSYYA GKLVDESMIVLRKRIHE+K AEQ+ DPP DW DWEKRCYS+YDS+ICEALGYLQ
Subjt:  SINSAPFLLPPISPTAH-RRRIRPGTTVKSS-----QSDNNSYYAGGKLVDESMIVLRKRIHEMKMAEQSRDPPADWLDWEKRCYSDYDSHICEALGYLQ

Query:  SHLMNTRPSVAVGMLALLTLSLPLSSAVVIHRFFQIAAALLAGIR
        SHLMNTRPSVA+GMLALLTLS+P+SSAVV+HRF +IA  LLAGIR
Subjt:  SHLMNTRPSVAVGMLALLTLSLPLSSAVVIHRFFQIAAALLAGIR

XP_023553368.1 uncharacterized protein LOC111810800 [Cucurbita pepo subsp. pepo]7.0e-5073.97Show/hide
Query:  SINSAPFLLPPISPTAHRRRIR--PGTTVKSS-----QSDNNSYYAGGKLVDESMIVLRKRIHEMKMAEQSRDPPADWLDWEKRCYSDYDSHICEALGYL
        S +SAP L PPISP+A RRR R  P  TV +S     Q+D+NSYYA GKLVDESMIVLRKRIHE+K AEQ+ DPP DW DWEKRCYS+YDS+ICEALGYL
Subjt:  SINSAPFLLPPISPTAHRRRIR--PGTTVKSS-----QSDNNSYYAGGKLVDESMIVLRKRIHEMKMAEQSRDPPADWLDWEKRCYSDYDSHICEALGYL

Query:  QSHLMNTRPSVAVGMLALLTLSLPLSSAVVIHRFFQIAAALLAGIR
        QSHLMNTRPSVA+GMLALLTLS+P+SSAV++HRF +IA  LLAGIR
Subjt:  QSHLMNTRPSVAVGMLALLTLSLPLSSAVVIHRFFQIAAALLAGIR

TrEMBL top hitse value%identityAlignment
A0A0A0KPI5 Uncharacterized protein1.5e-4566.23Show/hide
Query:  MISINSAPFLLPPI-SPTAH---RRRIRPGTTVKSS-----------QSDNNSYYAGGKLVDESMIVLRKRIHEMKMAEQSRDPPADWLDWEKRCYSDYD
        M SINS  F  P + SP AH   RR+  P  TV++S           +++NN+YYAGGK+VDESMIVLRKRIHE+KMAEQ ++PPADWLDWEKR YSDYD
Subjt:  MISINSAPFLLPPI-SPTAH---RRRIRPGTTVKSS-----------QSDNNSYYAGGKLVDESMIVLRKRIHEMKMAEQSRDPPADWLDWEKRCYSDYD

Query:  SHICEALGYLQSHLMNTRPSVAVGMLALLTLSLPLSSAVVIHRFFQIAAALLAG
        SHICEALGYLQSHLMNTRPSVA+GML L+ +S+PLSSA+++HRF  IA ALLAG
Subjt:  SHICEALGYLQSHLMNTRPSVAVGMLALLTLSLPLSSAVVIHRFFQIAAALLAG

A0A6J1FMN3 uncharacterized protein LOC1114453383.7e-4972.11Show/hide
Query:  SINSAPFL-LPPISPTAHRRRIRPGTTV-------KSSQSDNNSYYAGGKLVDESMIVLRKRIHEMKMAEQSRDPPADWLDWEKRCYSDYDSHICEALGY
        S NSAPFL   PIS ++ RRR  P  TV        S+ S+NN+YYA GKLVDESMIVLRKRIHE+KM E+S +PP+DWLDWEKRCYSDYDSHICEALGY
Subjt:  SINSAPFL-LPPISPTAHRRRIRPGTTV-------KSSQSDNNSYYAGGKLVDESMIVLRKRIHEMKMAEQSRDPPADWLDWEKRCYSDYDSHICEALGY

Query:  LQSHLMNTRPSVAVGMLALLTLSLPLSSAVVIHRFFQIAAALLAGIR
        LQSHLMNTRPSVA+G+L L+TLS+PLSSAV++HRF  IAAALLAG+R
Subjt:  LQSHLMNTRPSVAVGMLALLTLSLPLSSAVVIHRFFQIAAALLAGIR

A0A6J1GM73 uncharacterized protein LOC1114552468.1e-5275.86Show/hide
Query:  SINSAPFLLPPISPTAHRRRIR-PGTTVKSS-----QSDNNSYYAGGKLVDESMIVLRKRIHEMKMAEQSRDPPADWLDWEKRCYSDYDSHICEALGYLQ
        S +SAP L PPISP+AHRRR R P  TV +S     Q+D+NSYYA GKLVDESMIVLRKRIHE+K AEQ+ DPP DW DWEKRCYS+YDS+ICEALGYLQ
Subjt:  SINSAPFLLPPISPTAHRRRIR-PGTTVKSS-----QSDNNSYYAGGKLVDESMIVLRKRIHEMKMAEQSRDPPADWLDWEKRCYSDYDSHICEALGYLQ

Query:  SHLMNTRPSVAVGMLALLTLSLPLSSAVVIHRFFQIAAALLAGIR
        SHLMNTRPSVA+GMLALLTLS+P+SSAVV+HRF +IA  LLAGIR
Subjt:  SHLMNTRPSVAVGMLALLTLSLPLSSAVVIHRFFQIAAALLAGIR

A0A6J1JRY7 uncharacterized protein LOC1114870161.2e-5074.48Show/hide
Query:  SINSAPFLLPPISPTAH-RRRIRPGTTVKSS-----QSDNNSYYAGGKLVDESMIVLRKRIHEMKMAEQSRDPPADWLDWEKRCYSDYDSHICEALGYLQ
        S +SAP L PPISP++H RRR  P  TV +S     Q+D+NSYYA GKLVDESMIVLRKRIHE+K AEQ+ DPP DW DWEKRCYS+YDS+ICEALGYLQ
Subjt:  SINSAPFLLPPISPTAH-RRRIRPGTTVKSS-----QSDNNSYYAGGKLVDESMIVLRKRIHEMKMAEQSRDPPADWLDWEKRCYSDYDSHICEALGYLQ

Query:  SHLMNTRPSVAVGMLALLTLSLPLSSAVVIHRFFQIAAALLAGIR
        SHLMNTRPSVA+GMLALLTLS+P+SSAVV+HRF +IA  LLAGIR
Subjt:  SHLMNTRPSVAVGMLALLTLSLPLSSAVVIHRFFQIAAALLAGIR

A0A6J1JZG1 uncharacterized protein LOC1114892624.4e-5071.14Show/hide
Query:  SINSAPFL-LPPISPTAHRRRIRP---------GTTVKSSQSDNNSYYAGGKLVDESMIVLRKRIHEMKMAEQSRDPPADWLDWEKRCYSDYDSHICEAL
        S NSAPFL   PISP++ RRR  P         G    SS ++NN+YYA GKLVDESMIVLRKRIHE+KM EQS +PP+DWLDWEKRCYSDYDSHICEAL
Subjt:  SINSAPFL-LPPISPTAHRRRIRP---------GTTVKSSQSDNNSYYAGGKLVDESMIVLRKRIHEMKMAEQSRDPPADWLDWEKRCYSDYDSHICEAL

Query:  GYLQSHLMNTRPSVAVGMLALLTLSLPLSSAVVIHRFFQIAAALLAGIR
        GYLQSHLMNTRPSV++G+L L+TLS+PLSSAV++HRF  IAAALLAG+R
Subjt:  GYLQSHLMNTRPSVAVGMLALLTLSLPLSSAVVIHRFFQIAAALLAGIR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G15010.1 unknown protein3.6e-2847.14Show/hide
Query:  MISINSAPFLLPPISPTAHRRRIRPGTTVKSSQSDNNSYYAGGKLVDESMIVLRKRIHEMKMAEQSRDPPADWLDWEKRCYSDYDSHICEALGYLQSHLM
        MI I+S+     P+  +   +RI  GT  + + +    YY GG+ VDE+M+VLRKRIHEMKM E++ +PP+ W+ WEKR Y +YD+ IC+AL  LQ+ LM
Subjt:  MISINSAPFLLPPISPTAHRRRIRPGTTVKSSQSDNNSYYAGGKLVDESMIVLRKRIHEMKMAEQSRDPPADWLDWEKRCYSDYDSHICEALGYLQSHLM

Query:  NTRPSVAVGMLALLTLSLPLSSAVVIHRFFQIAAALLAGI
        N+RPSVA G   LL +S+P+SSAV   R   +A  LL  +
Subjt:  NTRPSVAVGMLALLTLSLPLSSAVVIHRFFQIAAALLAGI

AT2G01300.1 unknown protein7.3e-2954.63Show/hide
Query:  SSQSDNNSYYAGGKLVDESMIVLRKRIHEMKMAEQSRDPPADWLDWEKRCYSDYDSHICEALGYLQSHLMNTRPSVAVGMLALLTLSLPLSSAVVIHRFF
        ++ S  + YY GG+LVDE+MIVLRKRIHEMKM E++ +PP+ W+DWEKR Y+ YDS IC+++G LQS LMN+RP+VA+  L  L +S+P+SS V+  R  
Subjt:  SSQSDNNSYYAGGKLVDESMIVLRKRIHEMKMAEQSRDPPADWLDWEKRCYSDYDSHICEALGYLQSHLMNTRPSVAVGMLALLTLSLPLSSAVVIHRFF

Query:  QIAAALLA
         +   LLA
Subjt:  QIAAALLA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTTCCATAAATTCCGCCCCCTTCCTCCTCCCTCCGATCTCCCCCACCGCCCATCGCCGCCGCATCCGGCCGGGAACCACCGTAAAATCCTCACAATCCGACAACAA
CAGTTACTACGCGGGCGGGAAGCTGGTGGACGAGAGCATGATCGTGCTCCGGAAGCGGATCCACGAGATGAAGATGGCGGAGCAGAGCCGGGATCCGCCGGCCGATTGGC
TGGACTGGGAGAAACGCTGCTACTCCGACTACGATTCGCACATCTGTGAGGCCTTGGGCTACCTTCAATCGCACTTGATGAACACCAGGCCCAGCGTCGCCGTTGGAATG
CTCGCTCTTCTTACTCTCAGCCTTCCGCTCTCTTCCGCCGTCGTCATCCACCGCTTCTTCCAGATCGCCGCCGCGCTTCTCGCCGGAATCCGTTAA
mRNA sequenceShow/hide mRNA sequence
TTTCCCCCAAATCGCAAAAACTTCCAAATTTTTTTTTAAAAAAACTTGAAAATCACTCTGAAAATGATTTCCATAAATTCCGCCCCCTTCCTCCTCCCTCCGATCTCCCC
CACCGCCCATCGCCGCCGCATCCGGCCGGGAACCACCGTAAAATCCTCACAATCCGACAACAACAGTTACTACGCGGGCGGGAAGCTGGTGGACGAGAGCATGATCGTGC
TCCGGAAGCGGATCCACGAGATGAAGATGGCGGAGCAGAGCCGGGATCCGCCGGCCGATTGGCTGGACTGGGAGAAACGCTGCTACTCCGACTACGATTCGCACATCTGT
GAGGCCTTGGGCTACCTTCAATCGCACTTGATGAACACCAGGCCCAGCGTCGCCGTTGGAATGCTCGCTCTTCTTACTCTCAGCCTTCCGCTCTCTTCCGCCGTCGTCAT
CCACCGCTTCTTCCAGATCGCCGCCGCGCTTCTCGCCGGAATCCGTTAACTCACTTGTACAGTTACCACTGTGTTTATATGGAATGGAATGGGTGTGATGCCACGTCGTT
TTGATCATGTAATTTTCGTGAAACAGATTTTATAATTTTAATTTTTGTAGGGATTAGTTATTTCCTCTTTGTACAGCCTATATCTGATGACTGATTGTCTGTTTGTTTCG
CTTTTTTTATTTTATTTATTCGGTAAGTGTAAAAACTGGTTTCTAAAAAAATATATAATATTTATCAAAAAATATATATAAAATAAATAAATTTTATTACCGAGGGTTAG
TGGCGCAGTTGATTATCTTATTTGGTGATAATCCATTTCAACTCCACAGTCACAAGTTCGAGTCCGGAAATCGGTCCCCCATGTAAGGTTGATCTCCCTTCCCCA
Protein sequenceShow/hide protein sequence
MISINSAPFLLPPISPTAHRRRIRPGTTVKSSQSDNNSYYAGGKLVDESMIVLRKRIHEMKMAEQSRDPPADWLDWEKRCYSDYDSHICEALGYLQSHLMNTRPSVAVGM
LALLTLSLPLSSAVVIHRFFQIAAALLAGIR