; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0008147 (gene) of Chayote v1 genome

Gene IDSed0008147
OrganismSechium edule (Chayote v1)
DescriptionML domain-containing protein
Genome locationLG02:41551481..41556825
RNA-Seq ExpressionSed0008147
SyntenySed0008147
Gene Ontology termsGO:0055085 - transmembrane transport (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0005524 - ATP binding (molecular function)
GO:0140359 - ABC-type transmembrane transporter activity (molecular function)
InterPro domainsIPR003172 - MD-2-related lipid-recognition domain
IPR014756 - Immunoglobulin E-set
IPR039670 - Sterol transport protein NPC2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004136524.1 MD-2-related lipid-recognition protein ROSY1 [Cucumis sativus]7.4e-6985.9Show/hide
Query:  MKPFFQMKQICSFLLCLSFVVPQFS-ATPVQLCVETAKYDIKVKGVEISPSPIVRGHPTNMTFNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSC
        M+P FQMK I  FLL L F  PQFS +T +QLC ETAKYDI VKGVEISP+P+VRGHPTNM FNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSC
Subjt:  MKPFFQMKQICSFLLCLSFVVPQFS-ATPVQLCVETAKYDIKVKGVEISPSPIVRGHPTNMTFNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSC

Query:  PYSSGDFALAPLQTPLAFFLPGPYHMQITIVDGDDNKLTCFGFDYELVIASLFGDS
        PY SGDFAL PL+TPLAFFLPG YHMQITIVDGDDNKLTCFGFDYELVIASLFGDS
Subjt:  PYSSGDFALAPLQTPLAFFLPGPYHMQITIVDGDDNKLTCFGFDYELVIASLFGDS

XP_008442939.1 PREDICTED: uncharacterized protein LOC103486693 [Cucumis melo]3.3e-6987.18Show/hide
Query:  MKPFFQMKQICSFLLCLSFVVPQFS-ATPVQLCVETAKYDIKVKGVEISPSPIVRGHPTNMTFNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSC
        M+P FQMK I  FLL L F  PQFS AT VQLC ETA+YDI VKGVEISPSPIVRGHPTNMTFNL+IG PIIAGKMVVDISYFGWHIYSDSHDICVETSC
Subjt:  MKPFFQMKQICSFLLCLSFVVPQFS-ATPVQLCVETAKYDIKVKGVEISPSPIVRGHPTNMTFNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSC

Query:  PYSSGDFALAPLQTPLAFFLPGPYHMQITIVDGDDNKLTCFGFDYELVIASLFGDS
        PY SGDFAL PL+TPLAFFLPG YHMQITIVDGDDNKLTCFGFDYELVIASLFGDS
Subjt:  PYSSGDFALAPLQTPLAFFLPGPYHMQITIVDGDDNKLTCFGFDYELVIASLFGDS

XP_022151451.1 uncharacterized protein LOC111019382 [Momordica charantia]7.4e-6985.16Show/hide
Query:  MKPFFQMKQICSFLLCLSFVVPQFSATPVQLCVETAKYDIKVKGVEISPSPIVRGHPTNMTFNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSCP
        M+P FQMK I +FL+ L  V     ATPVQLC ETA YDI VKGVEISPSPIVRGHPTNMTFNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSCP
Subjt:  MKPFFQMKQICSFLLCLSFVVPQFSATPVQLCVETAKYDIKVKGVEISPSPIVRGHPTNMTFNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSCP

Query:  YSSGDFALAPLQTPLAFFLPGPYHMQITIVDGDDNKLTCFGFDYELVIASLFGDS
        YS GDFAL PL+TPLAFF PG YHMQI IVDGDDNKLTCFGFDYELVIASLFGDS
Subjt:  YSSGDFALAPLQTPLAFFLPGPYHMQITIVDGDDNKLTCFGFDYELVIASLFGDS

XP_022940446.1 uncharacterized protein LOC111445883 isoform X2 [Cucurbita moschata]1.8e-6784.52Show/hide
Query:  MKPFFQMKQICSFLLCLSFVVPQFSATPVQLCVETAKYDIKVKGVEISPSPIVRGHPTNMTFNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSCP
        M+P   MK I SFLL LSF VPQF AT V LC ETAKYDI VKGVEISPSPIVRGHPTNMT NLIIGKPIIAGKMVVDI YFGWH+YSDS+DICVETSCP
Subjt:  MKPFFQMKQICSFLLCLSFVVPQFSATPVQLCVETAKYDIKVKGVEISPSPIVRGHPTNMTFNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSCP

Query:  YSSGDFALAPLQTPLAFFLPGPYHMQITIVDGDDNKLTCFGFDYELVIASLFGDS
        Y+SGDFALAP QTPLAFF+PG YHMQITI+DG DNKLTCFGFDYELVIASLFG S
Subjt:  YSSGDFALAPLQTPLAFFLPGPYHMQITIVDGDDNKLTCFGFDYELVIASLFGDS

XP_038905833.1 uncharacterized protein LOC120091785 [Benincasa hispida]2.8e-6886.54Show/hide
Query:  MKPFFQMKQICSFLLCLSFVVPQFS-ATPVQLCVETAKYDIKVKGVEISPSPIVRGHPTNMTFNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSC
        M+P FQMK I   LL L F VPQFS AT VQLC ETAKYD+ VKGVEISPSPIVRGHPTNMTFNLIIGKPIIAGKMVVDISYFGWHIYS+SHDICVETSC
Subjt:  MKPFFQMKQICSFLLCLSFVVPQFS-ATPVQLCVETAKYDIKVKGVEISPSPIVRGHPTNMTFNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSC

Query:  PYSSGDFALAPLQTPLAFFLPGPYHMQITIVDGDDNKLTCFGFDYELVIASLFGDS
        PYS GDFAL P +TPLAFFLPG YHMQITIVDGDDNKLTCF FDYELVIASLFGDS
Subjt:  PYSSGDFALAPLQTPLAFFLPGPYHMQITIVDGDDNKLTCFGFDYELVIASLFGDS

TrEMBL top hitse value%identityAlignment
A0A1S3B7M8 uncharacterized protein LOC1034866931.6e-6987.18Show/hide
Query:  MKPFFQMKQICSFLLCLSFVVPQFS-ATPVQLCVETAKYDIKVKGVEISPSPIVRGHPTNMTFNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSC
        M+P FQMK I  FLL L F  PQFS AT VQLC ETA+YDI VKGVEISPSPIVRGHPTNMTFNL+IG PIIAGKMVVDISYFGWHIYSDSHDICVETSC
Subjt:  MKPFFQMKQICSFLLCLSFVVPQFS-ATPVQLCVETAKYDIKVKGVEISPSPIVRGHPTNMTFNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSC

Query:  PYSSGDFALAPLQTPLAFFLPGPYHMQITIVDGDDNKLTCFGFDYELVIASLFGDS
        PY SGDFAL PL+TPLAFFLPG YHMQITIVDGDDNKLTCFGFDYELVIASLFGDS
Subjt:  PYSSGDFALAPLQTPLAFFLPGPYHMQITIVDGDDNKLTCFGFDYELVIASLFGDS

A0A5D3DP69 Putative phosphatidylglycerol/phosphatidylinositol transfer protein1.6e-6987.18Show/hide
Query:  MKPFFQMKQICSFLLCLSFVVPQFS-ATPVQLCVETAKYDIKVKGVEISPSPIVRGHPTNMTFNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSC
        M+P FQMK I  FLL L F  PQFS AT VQLC ETA+YDI VKGVEISPSPIVRGHPTNMTFNL+IG PIIAGKMVVDISYFGWHIYSDSHDICVETSC
Subjt:  MKPFFQMKQICSFLLCLSFVVPQFS-ATPVQLCVETAKYDIKVKGVEISPSPIVRGHPTNMTFNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSC

Query:  PYSSGDFALAPLQTPLAFFLPGPYHMQITIVDGDDNKLTCFGFDYELVIASLFGDS
        PY SGDFAL PL+TPLAFFLPG YHMQITIVDGDDNKLTCFGFDYELVIASLFGDS
Subjt:  PYSSGDFALAPLQTPLAFFLPGPYHMQITIVDGDDNKLTCFGFDYELVIASLFGDS

A0A6J1DDJ6 uncharacterized protein LOC1110193823.6e-6985.16Show/hide
Query:  MKPFFQMKQICSFLLCLSFVVPQFSATPVQLCVETAKYDIKVKGVEISPSPIVRGHPTNMTFNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSCP
        M+P FQMK I +FL+ L  V     ATPVQLC ETA YDI VKGVEISPSPIVRGHPTNMTFNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSCP
Subjt:  MKPFFQMKQICSFLLCLSFVVPQFSATPVQLCVETAKYDIKVKGVEISPSPIVRGHPTNMTFNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSCP

Query:  YSSGDFALAPLQTPLAFFLPGPYHMQITIVDGDDNKLTCFGFDYELVIASLFGDS
        YS GDFAL PL+TPLAFF PG YHMQI IVDGDDNKLTCFGFDYELVIASLFGDS
Subjt:  YSSGDFALAPLQTPLAFFLPGPYHMQITIVDGDDNKLTCFGFDYELVIASLFGDS

A0A6J1FIH7 uncharacterized protein LOC111445883 isoform X28.8e-6884.52Show/hide
Query:  MKPFFQMKQICSFLLCLSFVVPQFSATPVQLCVETAKYDIKVKGVEISPSPIVRGHPTNMTFNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSCP
        M+P   MK I SFLL LSF VPQF AT V LC ETAKYDI VKGVEISPSPIVRGHPTNMT NLIIGKPIIAGKMVVDI YFGWH+YSDS+DICVETSCP
Subjt:  MKPFFQMKQICSFLLCLSFVVPQFSATPVQLCVETAKYDIKVKGVEISPSPIVRGHPTNMTFNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSCP

Query:  YSSGDFALAPLQTPLAFFLPGPYHMQITIVDGDDNKLTCFGFDYELVIASLFGDS
        Y+SGDFALAP QTPLAFF+PG YHMQITI+DG DNKLTCFGFDYELVIASLFG S
Subjt:  YSSGDFALAPLQTPLAFFLPGPYHMQITIVDGDDNKLTCFGFDYELVIASLFGDS

A0A6J1KWB4 uncharacterized protein LOC111498769 isoform X28.3e-6685.23Show/hide
Query:  MKQICSFLLCLSFVVPQFSATPVQLCVETAKYDIKVKGVEISPSPIVRGHPTNMTFNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSCPYSSGDF
        MK I SFLL LSF VP F  T V LC ETAKYDI VKGVEISPSPIVRGHPTNMT NLIIGKPIIAGKMVVDI YFGWH+YSDS+DICVETSCPY+SGDF
Subjt:  MKQICSFLLCLSFVVPQFSATPVQLCVETAKYDIKVKGVEISPSPIVRGHPTNMTFNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSCPYSSGDF

Query:  ALAPLQTPLAFFLPGPYHMQITIVDGDDNKLTCFGFDYELVIASLFGDS
        ALAP QTPLAFF+PG YHMQITI+DG DNKLTCFGFDYELVIASLFG S
Subjt:  ALAPLQTPLAFFLPGPYHMQITIVDGDDNKLTCFGFDYELVIASLFGDS

SwissProt top hitse value%identityAlignment
Q9AST8 MD-2-related lipid-recognition protein ROSY16.6e-0428.71Show/hide
Query:  QICSFLLCLSFVVPQFSATPVQLCVETAKYDIKVKGVEISPSPIVRGHPTNMTFNLIIGKPIIAGKMV-VDISYFGWHIYSDSHDICVETSCPYSSGDFA
        Q+   LL   F  P       Q C    +Y +KV  VEISP P+ R     +T   +  K I  G  V + ++   + + + S+ +C  T+CP + G   
Subjt:  QICSFLLCLSFVVPQFSATPVQLCVETAKYDIKVKGVEISPSPIVRGHPTNMTFNLIIGKPIIAGKMV-VDISYFGWHIYSDSHDICVETSCPYSSGDFA

Query:  L
        L
Subjt:  L

Arabidopsis top hitse value%identityAlignment
AT2G16005.1 MD-2-related lipid recognition domain-containing protein4.7e-0528.71Show/hide
Query:  QICSFLLCLSFVVPQFSATPVQLCVETAKYDIKVKGVEISPSPIVRGHPTNMTFNLIIGKPIIAGKMV-VDISYFGWHIYSDSHDICVETSCPYSSGDFA
        Q+   LL   F  P       Q C    +Y +KV  VEISP P+ R     +T   +  K I  G  V + ++   + + + S+ +C  T+CP + G   
Subjt:  QICSFLLCLSFVVPQFSATPVQLCVETAKYDIKVKGVEISPSPIVRGHPTNMTFNLIIGKPIIAGKMV-VDISYFGWHIYSDSHDICVETSCPYSSGDFA

Query:  L
        L
Subjt:  L

AT3G11780.1 MD-2-related lipid recognition domain-containing protein / ML domain-containing protein2.3e-2839.16Show/hide
Query:  SFLLCLSFVVPQFSATPVQLCVETAKYDIKVKGVEISPSPIVRGHPTNMTFNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSCPYSSGDFALAPL
        S+ L +S +V   +AT V  C    +Y++KV+GV+I+P PI RG P     +      I +GK+V+++SYFGWHI+S++HD+C ETSCP + GDF +A  
Subjt:  SFLLCLSFVVPQFSATPVQLCVETAKYDIKVKGVEISPSPIVRGHPTNMTFNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSCPYSSGDFALAPL

Query:  QTPLAFFLPGPYHMQITIVDGDDNKLTCFGFDYELVIASLFGD
        Q    +  PG Y +++ ++DG   +LTC  F +++   S   D
Subjt:  QTPLAFFLPGPYHMQITIVDGDDNKLTCFGFDYELVIASLFGD

AT3G11780.2 MD-2-related lipid recognition domain-containing protein / ML domain-containing protein1.1e-2536.02Show/hide
Query:  SFLLCLSFVVPQFSATPVQLCVETAKYDIKVKGVEISPSPIVRGHPTNMTFNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSCPYSSGDFALA--
        S+ L +S +V   +AT V  C    +Y++KV+GV+I+P PI RG P     +      I +GK+V+++SYFGWHI+S++HD+C ETSCP + GDF +A  
Subjt:  SFLLCLSFVVPQFSATPVQLCVETAKYDIKVKGVEISPSPIVRGHPTNMTFNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSCPYSSGDFALA--

Query:  ---PLQTP-------------LAFFLPGPYHMQITIVDGDDNKLTCFGFDYELVIASLFGD
           P  TP               F + G Y +++ ++DG   +LTC  F +++   S   D
Subjt:  ---PLQTP-------------LAFFLPGPYHMQITIVDGDDNKLTCFGFDYELVIASLFGD

AT3G44100.1 MD-2-related lipid recognition domain-containing protein2.6e-1934.31Show/hide
Query:  LLCLSFVVPQFSATPVQLCVETAKYDIKVKGVEISPSPIVRGHPTNMTFNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSCPYSSGDFALAPLQT
        LL   F +P   AT    C +     +KV GV+ISP P+V G           G+ I  GK+V+ + Y G  +++++HD+C ET+CP + G F L+  QT
Subjt:  LLCLSFVVPQFSATPVQLCVETAKYDIKVKGVEISPSPIVRGHPTNMTFNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSCPYSSGDFALAPLQT

Query:  PLAFFLPGPYHMQITIVDGDDNKLTCFGFDYELVIAS
          +   PG Y +++TI D +  +LTC  F +++ + S
Subjt:  PLAFFLPGPYHMQITIVDGDDNKLTCFGFDYELVIAS

AT5G06480.1 Immunoglobulin E-set superfamily protein3.6e-2939.13Show/hide
Query:  LSFVVPQFSATPVQLCVETAKYDIKVKGVEISPSPIVRGHPTNMTFNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSCPYSSGDFALAPLQTPLA
        L  +V    A  V  C E A+Y++KVK V+ISP+PI  G P   T +   G+ I  GK+V+++SYFGWH++S++HD+C ETSCP  +GDF +A  Q    
Subjt:  LSFVVPQFSATPVQLCVETAKYDIKVKGVEISPSPIVRGHPTNMTFNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSCPYSSGDFALAPLQTPLA

Query:  FFLPGPYHMQITIVDGDDNKLTCFGFDYELVIASLFGD
        +  PG Y +++ ++D    +LTC  F +++ + +   D
Subjt:  FFLPGPYHMQITIVDGDDNKLTCFGFDYELVIASLFGD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAACCCTTTTTTCAGATGAAGCAGATTTGCTCGTTTCTTCTTTGTTTGAGCTTTGTTGTTCCTCAGTTCTCTGCCACTCCAGTTCAACTCTGCGTTGAGACAGCCAA
GTATGATATCAAGGTGAAAGGAGTAGAGATATCTCCGAGCCCTATAGTTAGAGGTCACCCAACAAATATGACCTTCAATCTAATTATAGGTAAGCCAATCATTGCAGGAA
AAATGGTAGTTGATATTTCATATTTTGGATGGCACATATATAGTGACAGCCATGACATTTGTGTTGAAACGTCCTGCCCTTATTCGTCTGGTGATTTTGCACTCGCCCCA
TTGCAAACGCCTTTGGCATTCTTTTTACCTGGTCCATATCATATGCAGATAACCATTGTTGATGGAGATGATAATAAACTTACATGTTTTGGCTTTGATTATGAATTGGT
GATTGCATCACTATTTGGGGATAGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAACCCTTTTTTCAGATGAAGCAGATTTGCTCGTTTCTTCTTTGTTTGAGCTTTGTTGTTCCTCAGTTCTCTGCCACTCCAGTTCAACTCTGCGTTGAGACAGCCAA
GTATGATATCAAGGTGAAAGGAGTAGAGATATCTCCGAGCCCTATAGTTAGAGGTCACCCAACAAATATGACCTTCAATCTAATTATAGGTAAGCCAATCATTGCAGGAA
AAATGGTAGTTGATATTTCATATTTTGGATGGCACATATATAGTGACAGCCATGACATTTGTGTTGAAACGTCCTGCCCTTATTCGTCTGGTGATTTTGCACTCGCCCCA
TTGCAAACGCCTTTGGCATTCTTTTTACCTGGTCCATATCATATGCAGATAACCATTGTTGATGGAGATGATAATAAACTTACATGTTTTGGCTTTGATTATGAATTGGT
GATTGCATCACTATTTGGGGATAGCTAA
Protein sequenceShow/hide protein sequence
MKPFFQMKQICSFLLCLSFVVPQFSATPVQLCVETAKYDIKVKGVEISPSPIVRGHPTNMTFNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSCPYSSGDFALAP
LQTPLAFFLPGPYHMQITIVDGDDNKLTCFGFDYELVIASLFGDS