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Sed0008191 (gene) of Chayote v1 genome

Gene IDSed0008191
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG04:29603588..29604612
RNA-Seq ExpressionSed0008191
SyntenySed0008191
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6596576.1 Rho GTPase-activating protein 1, partial [Cucurbita argyrosperma subsp. sororia]9.4e-2873.74Show/hide
Query:  GRDGEVTGGEGSRFPAAEVDRELHPGHNQHVEVDPISSEVAESVKAKEHAKIKEAEEEERQQAKKKEAKQTLKTTFIVSGVVAAVAAVAFAIFKKLREN
        GRDG  TGG GSRFPA +VDRELHPGHNQHV VDPISS+VA SV+ KE AK K   EEER+QAKKK+  QTLKTTFIVSGV+AAVA  AF + KKLR+N
Subjt:  GRDGEVTGGEGSRFPAAEVDRELHPGHNQHVEVDPISSEVAESVKAKEHAKIKEAEEEERQQAKKKEAKQTLKTTFIVSGVVAAVAAVAFAIFKKLREN

XP_022144747.1 uncharacterized protein LOC111014362 [Momordica charantia]2.0e-2569.9Show/hide
Query:  MASPGRDGEVTGGEGSRFPAAEVDRELHPGHNQHVEVDPISSEVAESVKAKEHAKIKEAEEEERQQAKKKEAKQTLKTTFIVSGVVAAVAAVAFAIFKKL
        MASPG DG V+   GS FPAA+VDREL+PGHN+HVEVDP+SSEVA S++ KE AK ++A EEER++AKK +  +TLKTTFIVSGV+AAVA  AFAI KKL
Subjt:  MASPGRDGEVTGGEGSRFPAAEVDRELHPGHNQHVEVDPISSEVAESVKAKEHAKIKEAEEEERQQAKKKEAKQTLKTTFIVSGVVAAVAAVAFAIFKKL

Query:  REN
        REN
Subjt:  REN

XP_022947065.1 uncharacterized protein LOC111451047 [Cucurbita moschata]4.5e-3075.73Show/hide
Query:  MASPGRDGEVTGGEGSRFPAAEVDRELHPGHNQHVEVDPISSEVAESVKAKEHAKIKEAEEEERQQAKKKEAKQTLKTTFIVSGVVAAVAAVAFAIFKKL
        MASPGRDG  TGG GSRFPA +VDRELHPGHNQHV VDPISS+VA SV+ KE AK K   EEER+QAKKK+  QTLKTTFIVSGVVAAVA  AF + KKL
Subjt:  MASPGRDGEVTGGEGSRFPAAEVDRELHPGHNQHVEVDPISSEVAESVKAKEHAKIKEAEEEERQQAKKKEAKQTLKTTFIVSGVVAAVAAVAFAIFKKL

Query:  REN
        R+N
Subjt:  REN

XP_023005785.1 uncharacterized protein LOC111498680 [Cucurbita maxima]5.9e-3074.76Show/hide
Query:  MASPGRDGEVTGGEGSRFPAAEVDRELHPGHNQHVEVDPISSEVAESVKAKEHAKIKEAEEEERQQAKKKEAKQTLKTTFIVSGVVAAVAAVAFAIFKKL
        MASPGRDG  TGG GSRFPA +VDRELHPGHNQHV VDPISS+VA SV+ KE AK K   EEER+QAKKK+  QTLKTTFIVSGV+AAVA  AF + KKL
Subjt:  MASPGRDGEVTGGEGSRFPAAEVDRELHPGHNQHVEVDPISSEVAESVKAKEHAKIKEAEEEERQQAKKKEAKQTLKTTFIVSGVVAAVAAVAFAIFKKL

Query:  REN
        R+N
Subjt:  REN

XP_023539528.1 uncharacterized protein LOC111800168 [Cucurbita pepo subsp. pepo]6.3e-2475.28Show/hide
Query:  GSRFPAAEVDRELHPGHNQHVEVDPISSEVAESVKAKEHAKIKEAEEEERQQAKKKEAKQTLKTTFIVSGVVAAVAAVAFAIFKKLREN
        GSRFPA +VDRELHPGHNQHV VDPISS+VA SV+ KE AK K   EEER+QAKKK+  QTLKTTFIVSGVVAAVA  AF + KKLR+N
Subjt:  GSRFPAAEVDRELHPGHNQHVEVDPISSEVAESVKAKEHAKIKEAEEEERQQAKKKEAKQTLKTTFIVSGVVAAVAAVAFAIFKKLREN

TrEMBL top hitse value%identityAlignment
A0A0A0LBF7 Uncharacterized protein7.5e-2365.05Show/hide
Query:  MASPGRDGEVTGGEGSRFPAAEVDRELHPGHNQHVEVDPISSEVAESVKAKEHAKIKEAEEEERQQAKKKEAKQTLKTTFIVSGVVAAVAAVAFAIFKKL
        M S GRDGE        FPA +V+REL+PG N+HVEVDP+SS+VA S++AKEH K K AE+E ++  KKKEA QTLKTTFIVSG++AAVA  AFAI KKL
Subjt:  MASPGRDGEVTGGEGSRFPAAEVDRELHPGHNQHVEVDPISSEVAESVKAKEHAKIKEAEEEERQQAKKKEAKQTLKTTFIVSGVVAAVAAVAFAIFKKL

Query:  REN
        REN
Subjt:  REN

A0A1S3B6R1 uncharacterized protein LOC1034866211.3e-2266.02Show/hide
Query:  MASPGRDGEVTGGEGSRFPAAEVDRELHPGHNQHVEVDPISSEVAESVKAKEHAKIKEAEEEERQQAKKKEAKQTLKTTFIVSGVVAAVAAVAFAIFKKL
        M S GRDGE        FPA +V+REL+PG N+HVEVDPISS+VA S++AKEH K   AEEE ++  KKKEA QTLKTTFIVSG++AAVA  AFAI KKL
Subjt:  MASPGRDGEVTGGEGSRFPAAEVDRELHPGHNQHVEVDPISSEVAESVKAKEHAKIKEAEEEERQQAKKKEAKQTLKTTFIVSGVVAAVAAVAFAIFKKL

Query:  REN
        REN
Subjt:  REN

A0A6J1CUK2 uncharacterized protein LOC1110143629.5e-2669.9Show/hide
Query:  MASPGRDGEVTGGEGSRFPAAEVDRELHPGHNQHVEVDPISSEVAESVKAKEHAKIKEAEEEERQQAKKKEAKQTLKTTFIVSGVVAAVAAVAFAIFKKL
        MASPG DG V+   GS FPAA+VDREL+PGHN+HVEVDP+SSEVA S++ KE AK ++A EEER++AKK +  +TLKTTFIVSGV+AAVA  AFAI KKL
Subjt:  MASPGRDGEVTGGEGSRFPAAEVDRELHPGHNQHVEVDPISSEVAESVKAKEHAKIKEAEEEERQQAKKKEAKQTLKTTFIVSGVVAAVAAVAFAIFKKL

Query:  REN
        REN
Subjt:  REN

A0A6J1G5S8 uncharacterized protein LOC1114510472.2e-3075.73Show/hide
Query:  MASPGRDGEVTGGEGSRFPAAEVDRELHPGHNQHVEVDPISSEVAESVKAKEHAKIKEAEEEERQQAKKKEAKQTLKTTFIVSGVVAAVAAVAFAIFKKL
        MASPGRDG  TGG GSRFPA +VDRELHPGHNQHV VDPISS+VA SV+ KE AK K   EEER+QAKKK+  QTLKTTFIVSGVVAAVA  AF + KKL
Subjt:  MASPGRDGEVTGGEGSRFPAAEVDRELHPGHNQHVEVDPISSEVAESVKAKEHAKIKEAEEEERQQAKKKEAKQTLKTTFIVSGVVAAVAAVAFAIFKKL

Query:  REN
        R+N
Subjt:  REN

A0A6J1KYC8 uncharacterized protein LOC1114986802.8e-3074.76Show/hide
Query:  MASPGRDGEVTGGEGSRFPAAEVDRELHPGHNQHVEVDPISSEVAESVKAKEHAKIKEAEEEERQQAKKKEAKQTLKTTFIVSGVVAAVAAVAFAIFKKL
        MASPGRDG  TGG GSRFPA +VDRELHPGHNQHV VDPISS+VA SV+ KE AK K   EEER+QAKKK+  QTLKTTFIVSGV+AAVA  AF + KKL
Subjt:  MASPGRDGEVTGGEGSRFPAAEVDRELHPGHNQHVEVDPISSEVAESVKAKEHAKIKEAEEEERQQAKKKEAKQTLKTTFIVSGVVAAVAAVAFAIFKKL

Query:  REN
        R+N
Subjt:  REN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G52620.1 unknown protein3.8e-1144.19Show/hide
Query:  FPAAEVDRELHPGHNQHVEVDPISSEVAESVKAKEHAKIKEAEEEERQQAKKKEAKQTLKTTFIVSGVVAAVAAVAFAIFKKLREN
        FP  + + EL+PG N++ EVDP+SSE+A         K+++  E+      K++  +TLK T IVS V+ AVA  AFAI KKL+EN
Subjt:  FPAAEVDRELHPGHNQHVEVDPISSEVAESVKAKEHAKIKEAEEEERQQAKKKEAKQTLKTTFIVSGVVAAVAAVAFAIFKKLREN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAGCCCAGGCAGAGATGGGGAAGTAACCGGCGGTGAAGGTTCCCGGTTTCCGGCTGCTGAGGTGGACAGAGAATTACATCCCGGCCATAACCAGCACGTCGAGGT
GGATCCCATTTCCTCTGAAGTGGCTGAATCTGTCAAGGCTAAGGAGCATGCGAAGATCAAAGAAGCTGAAGAAGAAGAAAGACAGCAGGCGAAGAAGAAGGAAGCGAAAC
AGACATTGAAGACAACGTTCATCGTCTCCGGCGTCGTTGCTGCCGTGGCGGCGGTCGCCTTCGCCATTTTTAAAAAATTAAGAGAAAACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGAGCCCAGGCAGAGATGGGGAAGTAACCGGCGGTGAAGGTTCCCGGTTTCCGGCTGCTGAGGTGGACAGAGAATTACATCCCGGCCATAACCAGCACGTCGAGGT
GGATCCCATTTCCTCTGAAGTGGCTGAATCTGTCAAGGCTAAGGAGCATGCGAAGATCAAAGAAGCTGAAGAAGAAGAAAGACAGCAGGCGAAGAAGAAGGAAGCGAAAC
AGACATTGAAGACAACGTTCATCGTCTCCGGCGTCGTTGCTGCCGTGGCGGCGGTCGCCTTCGCCATTTTTAAAAAATTAAGAGAAAACTGA
Protein sequenceShow/hide protein sequence
MASPGRDGEVTGGEGSRFPAAEVDRELHPGHNQHVEVDPISSEVAESVKAKEHAKIKEAEEEERQQAKKKEAKQTLKTTFIVSGVVAAVAAVAFAIFKKLREN