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Sed0008228 (gene) of Chayote v1 genome

Gene IDSed0008228
OrganismSechium edule (Chayote v1)
DescriptionThaumatin-like protein
Genome locationLG05:6471612..6472135
RNA-Seq ExpressionSed0008228
SyntenySed0008228
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6579487.1 hypothetical protein SDJN03_23935, partial [Cucurbita argyrosperma subsp. sororia]5.1e-0642.99Show/hide
Query:  LIFFL-LFSSHFHSHAASFLIPDNGVPTVTNDNKGLLPLLNDNENNVWALVINPSAGSSRILVRSNCNIDGPGCHTCRAGHGL---RAYVDRGLGSLFGW
        LIF L LFS H HS+AA        +    +D + LL L++D +NN WA V++PS+GSS I V +      PG        GL   +AYVDRG GSL  W
Subjt:  LIFFL-LFSSHFHSHAASFLIPDNGVPTVTNDNKGLLPLLNDNENNVWALVINPSAGSSRILVRSNCNIDGPGCHTCRAGHGL---RAYVDRGLGSLFGW

Query:  RAYDNEI
        RAY +++
Subjt:  RAYDNEI
KAG6579490.1 hypothetical protein SDJN03_23938, partial [Cucurbita argyrosperma subsp. sororia]2.5e-0542.99Show/hide
Query:  LIFFL-LFSSHFHSHAASFLIPDNGVPTVTNDNKGLLPLLNDNENNVWALVINPSAGSSRILVRSNCNIDGPGCHTCRAGHGL---RAYVDRGLGSLFGW
        LIF L LFS H HS+AAS            +D + L  L++D +NN WA V++PS+ SS I V +      PG        GL   RAYVDRG GSL  W
Subjt:  LIFFL-LFSSHFHSHAASFLIPDNGVPTVTNDNKGLLPLLNDNENNVWALVINPSAGSSRILVRSNCNIDGPGCHTCRAGHGL---RAYVDRGLGSLFGW

Query:  RAYDNEI
        RAY +++
Subjt:  RAYDNEI
KGN50133.1 hypothetical protein Csa_000073 [Cucumis sativus]4.9e-0939.84Show/hide
Query:  MKTLIFFL-----LFSSHFH-SHAASFLIPDNGVPTVTNDNKGLLPLLNDNENNVWALVINPSAGSSRILVRSNCNIDGPGCHTCRAGH-----------
        M T IFF      LFS HF  S+AASF + +NG  T +         L+DN N+ WA V+NP+  SS I +   C  DG  C  C  G            
Subjt:  MKTLIFFL-----LFSSHFH-SHAASFLIPDNGVPTVTNDNKGLLPLLNDNENNVWALVINPSAGSSRILVRSNCNIDGPGCHTCRAGH-----------

Query:  -GLRAYVDRGLGSLFGWRAYDNEITKYV
           +A+VD+G GS F WR Y N+I KYV
Subjt:  -GLRAYVDRGLGSLFGWRAYDNEITKYV
TrEMBL top hitse value%identityAlignment
A0A0A0KKL7 Uncharacterized protein2.4e-0939.84Show/hide
Query:  MKTLIFFL-----LFSSHFH-SHAASFLIPDNGVPTVTNDNKGLLPLLNDNENNVWALVINPSAGSSRILVRSNCNIDGPGCHTCRAGH-----------
        M T IFF      LFS HF  S+AASF + +NG  T +         L+DN N+ WA V+NP+  SS I +   C  DG  C  C  G            
Subjt:  MKTLIFFL-----LFSSHFH-SHAASFLIPDNGVPTVTNDNKGLLPLLNDNENNVWALVINPSAGSSRILVRSNCNIDGPGCHTCRAGH-----------

Query:  -GLRAYVDRGLGSLFGWRAYDNEITKYV
           +A+VD+G GS F WR Y N+I KYV
Subjt:  -GLRAYVDRGLGSLFGWRAYDNEITKYV
A0A0A0KMN1 Thaumatin-like protein5.1e-0440.48Show/hide
Query:  IFFLLFSSHF-HSHAASFLIPDN-----GVPTVTNDNKGLLPLLNDNENNVWALVINPSAGSSRILVRSNCNIDGPGCHTCRAG
        I FL F S F HSHAA+F I +N         V    + L      N+N+VW L +NP   ++RI  R+NCN DG G   C+ G
Subjt:  IFFLLFSSHF-HSHAASFLIPDN-----GVPTVTNDNKGLLPLLNDNENNVWALVINPSAGSSRILVRSNCNIDGPGCHTCRAG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAACCTTAATTTTCTTTCTTCTTTTCTCCTCCCATTTCCATTCCCATGCAGCTTCTTTTCTAATCCCCGACAATGGAGTTCCAACTGTTACCAACGACAATAAGGG
TTTATTGCCGCTCCTAAACGATAACGAGAACAATGTTTGGGCATTGGTGATCAACCCGAGCGCGGGAAGCTCTCGCATTTTGGTTCGAAGCAACTGTAACATCGATGGAC
CCGGATGCCATACATGTCGAGCCGGTCACGGGTTGCGAGCTTACGTCGACCGAGGCCTCGGTAGCCTTTTCGGATGGCGCGCTTATGATAATGAGATCACCAAATATGTC
TCCAGCAACCAATTCTAA
mRNA sequenceShow/hide mRNA sequence
GAAAAATAAAAAAATCAGCATAAATGAAAACCTTAATTTTCTTTCTTCTTTTCTCCTCCCATTTCCATTCCCATGCAGCTTCTTTTCTAATCCCCGACAATGGAGTTCCA
ACTGTTACCAACGACAATAAGGGTTTATTGCCGCTCCTAAACGATAACGAGAACAATGTTTGGGCATTGGTGATCAACCCGAGCGCGGGAAGCTCTCGCATTTTGGTTCG
AAGCAACTGTAACATCGATGGACCCGGATGCCATACATGTCGAGCCGGTCACGGGTTGCGAGCTTACGTCGACCGAGGCCTCGGTAGCCTTTTCGGATGGCGCGCTTATG
ATAATGAGATCACCAAATATGTCTCCAGCAACCAATTCTAATTATGTTGCCATGATATGGATATCTATATGGTTTTGTTTCATTACTAATTTCTTACTGAGTGTGTTTGG
AAGAACATTCTACAAAGGAAAATCAAATCTACCCATTGTGGGGATTGAATTGTACACTATTAACGCCTTATTATTTTGGCCAGC
Protein sequenceShow/hide protein sequence
MKTLIFFLLFSSHFHSHAASFLIPDNGVPTVTNDNKGLLPLLNDNENNVWALVINPSAGSSRILVRSNCNIDGPGCHTCRAGHGLRAYVDRGLGSLFGWRAYDNEITKYV
SSNQF