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Sed0008234 (gene) of Chayote v1 genome

Gene IDSed0008234
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG12:33786680..33786934
RNA-Seq ExpressionSed0008234
SyntenySed0008234
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046741.1 hypothetical protein E6C27_scaffold216G00220 [Cucumis melo var. makuwa]5.2e-0853.95Show/hide
Query:  SSPPSNFDEFSVDSPPGFISSTPLNNEAPDLLPVFKSS--------------GENCVHLIPLILFLSALILWLCSS
        SS   +FDEFSVD  P  ISS PL NEA  +LP+FKS+              G N VHLIPL LFL ALILW+CS+
Subjt:  SSPPSNFDEFSVDSPPGFISSTPLNNEAPDLLPVFKSS--------------GENCVHLIPLILFLSALILWLCSS

KAE8653076.1 hypothetical protein Csa_019861 [Cucumis sativus]2.3e-0853.25Show/hide
Query:  SSPPSNFDEFSVDSPPGFISSTPLNNEAPDLLPVFKSS--------------GENCVHLIPLILFLSALILWLCSST
        SS   +F+EFSVD  P  ISS PL NEA  +LP+FKS+              GEN VHLIPL LFL ALILW+CS++
Subjt:  SSPPSNFDEFSVDSPPGFISSTPLNNEAPDLLPVFKSS--------------GENCVHLIPLILFLSALILWLCSST

KAG6587911.1 hypothetical protein SDJN03_16476, partial [Cucurbita argyrosperma subsp. sororia]5.9e-1261.84Show/hide
Query:  SSPPSNFDEFSVDSPPGFISSTPLNNEAP-DLLPV-------------FKSSGENCVHLIPLILFLSALILWLCSS
        SS   NFDE+SVD PPGF SS PL NEAP DLLP+             FK  G+N VHLIPLIL LSALILW+CSS
Subjt:  SSPPSNFDEFSVDSPPGFISSTPLNNEAP-DLLPV-------------FKSSGENCVHLIPLILFLSALILWLCSS

KAG7021797.1 hypothetical protein SDJN02_15525, partial [Cucurbita argyrosperma subsp. argyrosperma]5.9e-1261.84Show/hide
Query:  SSPPSNFDEFSVDSPPGFISSTPLNNEAP-DLLPV-------------FKSSGENCVHLIPLILFLSALILWLCSS
        SS   NFDE+SVD PPGF SS PL NEAP DLLP+             FK  G+N VHLIPLIL LSALILW+CSS
Subjt:  SSPPSNFDEFSVDSPPGFISSTPLNNEAP-DLLPV-------------FKSSGENCVHLIPLILFLSALILWLCSS

TrEMBL top hitse value%identityAlignment
A0A0A0LTP3 Uncharacterized protein1.9e-0853.95Show/hide
Query:  SSPPSNFDEFSVDSPPGFISSTPLNNEAPDLLPVFKSS--------------GENCVHLIPLILFLSALILWLCSS
        SS   +F+EFSVD  P  ISS PL NEA  +LP+FKS+              GEN VHLIPL LFL ALILW+CS+
Subjt:  SSPPSNFDEFSVDSPPGFISSTPLNNEAPDLLPVFKSS--------------GENCVHLIPLILFLSALILWLCSS

A0A5A7TZH0 Uncharacterized protein2.5e-0853.95Show/hide
Query:  SSPPSNFDEFSVDSPPGFISSTPLNNEAPDLLPVFKSS--------------GENCVHLIPLILFLSALILWLCSS
        SS   +FDEFSVD  P  ISS PL NEA  +LP+FKS+              G N VHLIPL LFL ALILW+CS+
Subjt:  SSPPSNFDEFSVDSPPGFISSTPLNNEAPDLLPVFKSS--------------GENCVHLIPLILFLSALILWLCSS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTTCAAGCACGGCTCTGAACTTTGACGAGTTCTCGGTTGACTTGCCTCCGGGTTTCATCAGCTCCCCACCATCGAACTTTGATGAATTCTCGGTTGACTCGCCACC
GGGTTTTATCAGCTCGACACCATTGAACAATGAAGCTCCTGATCTTTTGCCGGTCTTTAAATCTTCAGGAGAAAATTGTGTTCATCTAATTCCTCTTATTCTGTTTCTTT
CTGCTTTAATACTTTGGCTTTGTTCGTCCACCTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCTTCAAGCACGGCTCTGAACTTTGACGAGTTCTCGGTTGACTTGCCTCCGGGTTTCATCAGCTCCCCACCATCGAACTTTGATGAATTCTCGGTTGACTCGCCACC
GGGTTTTATCAGCTCGACACCATTGAACAATGAAGCTCCTGATCTTTTGCCGGTCTTTAAATCTTCAGGAGAAAATTGTGTTCATCTAATTCCTCTTATTCTGTTTCTTT
CTGCTTTAATACTTTGGCTTTGTTCGTCCACCTGA
Protein sequenceShow/hide protein sequence
MPSSTALNFDEFSVDLPPGFISSPPSNFDEFSVDSPPGFISSTPLNNEAPDLLPVFKSSGENCVHLIPLILFLSALILWLCSST