; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0008239 (gene) of Chayote v1 genome

Gene IDSed0008239
OrganismSechium edule (Chayote v1)
DescriptionylmG homolog protein 1-2, chloroplastic-like
Genome locationLG06:108383..108817
RNA-Seq ExpressionSed0008239
SyntenySed0008239
Gene Ontology termsGO:0010020 - chloroplast fission (biological process)
GO:0090143 - nucleoid organization (biological process)
GO:0016020 - membrane (cellular component)
InterPro domainsIPR003425 - CCB3/YggT


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB5569801.1 hypothetical protein DKX38_003594 [Salix brachista]5.9e-4491.26Show/hide
Query:  WAALCNRPTGYLNTPLTVVAVGLAKWLDIYSGVLMVRVLLSWFPNIHWDRQPLSTIRDLCDPYLNLFRNIIPLIFDTLDVSPLLAFAVLGTLGSILSSSA
        +AAL +RPTGYLNTPLTVVA GLAKWLDIYSGVLMVRVLLSWFPNI WDRQPLS IRDLCDPYLNLFRNIIP IFDTLDVSPLLAFAVLGTLGSIL+SS 
Subjt:  WAALCNRPTGYLNTPLTVVAVGLAKWLDIYSGVLMVRVLLSWFPNIHWDRQPLSTIRDLCDPYLNLFRNIIPLIFDTLDVSPLLAFAVLGTLGSILSSSA

Query:  GMY
        GMY
Subjt:  GMY

KAF9861841.1 hypothetical protein H0E87_012905 [Populus deltoides]1.0e-4385.09Show/hide
Query:  SNTIYSNSS--WAALCNRPTGYLNTPLTVVAVGLAKWLDIYSGVLMVRVLLSWFPNIHWDRQPLSTIRDLCDPYLNLFRNIIPLIFDTLDVSPLLAFAVL
        SN ++S     +AAL +RPTGYLNTPLTVVA GLAKWLDIYSGVLMVRVLLSWFPNI WDRQPLS IRDLCDPYLNLFRNIIP IFDTLDVSPLLAFAVL
Subjt:  SNTIYSNSS--WAALCNRPTGYLNTPLTVVAVGLAKWLDIYSGVLMVRVLLSWFPNIHWDRQPLSTIRDLCDPYLNLFRNIIPLIFDTLDVSPLLAFAVL

Query:  GTLGSILSSSAGMY
        GTLGSIL+SS GMY
Subjt:  GTLGSILSSSAGMY

KAG6785406.1 hypothetical protein POTOM_011136 [Populus tomentosa]1.0e-4385.09Show/hide
Query:  SNTIYSNSS--WAALCNRPTGYLNTPLTVVAVGLAKWLDIYSGVLMVRVLLSWFPNIHWDRQPLSTIRDLCDPYLNLFRNIIPLIFDTLDVSPLLAFAVL
        SN ++S     +AAL +RPTGYLNTPLTVVA GLAKWLDIYSGVLMVRVLLSWFPNI WDRQPLS IRDLCDPYLNLFRNIIP IFDTLDVSPLLAFAVL
Subjt:  SNTIYSNSS--WAALCNRPTGYLNTPLTVVAVGLAKWLDIYSGVLMVRVLLSWFPNIHWDRQPLSTIRDLCDPYLNLFRNIIPLIFDTLDVSPLLAFAVL

Query:  GTLGSILSSSAGMY
        GTLGSIL+SS GMY
Subjt:  GTLGSILSSSAGMY

XP_002301821.3 ylmG homolog protein 1-2, chloroplastic [Populus trichocarpa]1.0e-4385.09Show/hide
Query:  SNTIYSNSS--WAALCNRPTGYLNTPLTVVAVGLAKWLDIYSGVLMVRVLLSWFPNIHWDRQPLSTIRDLCDPYLNLFRNIIPLIFDTLDVSPLLAFAVL
        SN ++S     +AAL +RPTGYLNTPLTVVA GLAKWLDIYSGVLMVRVLLSWFPNI WDRQPLS IRDLCDPYLNLFRNIIP IFDTLDVSPLLAFAVL
Subjt:  SNTIYSNSS--WAALCNRPTGYLNTPLTVVAVGLAKWLDIYSGVLMVRVLLSWFPNIHWDRQPLSTIRDLCDPYLNLFRNIIPLIFDTLDVSPLLAFAVL

Query:  GTLGSILSSSAGMY
        GTLGSIL+SS GMY
Subjt:  GTLGSILSSSAGMY

XP_011024561.1 PREDICTED: uncharacterized protein LOC105125696 [Populus euphratica]1.0e-4385.09Show/hide
Query:  SNTIYSNSS--WAALCNRPTGYLNTPLTVVAVGLAKWLDIYSGVLMVRVLLSWFPNIHWDRQPLSTIRDLCDPYLNLFRNIIPLIFDTLDVSPLLAFAVL
        SN ++S     +AAL +RPTGYLNTPLTVVA GLAKWLDIYSGVLMVRVLLSWFPNI WDRQPLS IRDLCDPYLNLFRNIIP IFDTLDVSPLLAFAVL
Subjt:  SNTIYSNSS--WAALCNRPTGYLNTPLTVVAVGLAKWLDIYSGVLMVRVLLSWFPNIHWDRQPLSTIRDLCDPYLNLFRNIIPLIFDTLDVSPLLAFAVL

Query:  GTLGSILSSSAGMY
        GTLGSIL+SS GMY
Subjt:  GTLGSILSSSAGMY

TrEMBL top hitse value%identityAlignment
A0A2K2BP78 Uncharacterized protein4.8e-4485.09Show/hide
Query:  SNTIYSNSS--WAALCNRPTGYLNTPLTVVAVGLAKWLDIYSGVLMVRVLLSWFPNIHWDRQPLSTIRDLCDPYLNLFRNIIPLIFDTLDVSPLLAFAVL
        SN ++S     +AAL +RPTGYLNTPLTVVA GLAKWLDIYSGVLMVRVLLSWFPNI WDRQPLS IRDLCDPYLNLFRNIIP IFDTLDVSPLLAFAVL
Subjt:  SNTIYSNSS--WAALCNRPTGYLNTPLTVVAVGLAKWLDIYSGVLMVRVLLSWFPNIHWDRQPLSTIRDLCDPYLNLFRNIIPLIFDTLDVSPLLAFAVL

Query:  GTLGSILSSSAGMY
        GTLGSIL+SS GMY
Subjt:  GTLGSILSSSAGMY

A0A5N5NST8 Uncharacterized protein2.8e-4491.26Show/hide
Query:  WAALCNRPTGYLNTPLTVVAVGLAKWLDIYSGVLMVRVLLSWFPNIHWDRQPLSTIRDLCDPYLNLFRNIIPLIFDTLDVSPLLAFAVLGTLGSILSSSA
        +AAL +RPTGYLNTPLTVVA GLAKWLDIYSGVLMVRVLLSWFPNI WDRQPLS IRDLCDPYLNLFRNIIP IFDTLDVSPLLAFAVLGTLGSIL+SS 
Subjt:  WAALCNRPTGYLNTPLTVVAVGLAKWLDIYSGVLMVRVLLSWFPNIHWDRQPLSTIRDLCDPYLNLFRNIIPLIFDTLDVSPLLAFAVLGTLGSILSSSA

Query:  GMY
        GMY
Subjt:  GMY

A0A6M2F4J7 Uncharacterized protein3.7e-4485.09Show/hide
Query:  SNTIYSNSS--WAALCNRPTGYLNTPLTVVAVGLAKWLDIYSGVLMVRVLLSWFPNIHWDRQPLSTIRDLCDPYLNLFRNIIPLIFDTLDVSPLLAFAVL
        SN ++S     +AAL +RPTGYLNTPLTVVA GLAKWLDIYSGVLMVRVLLSWFPNI WDRQPLS IRDLCDPYLNLFRNIIP IFDTLDVSPLLAFAVL
Subjt:  SNTIYSNSS--WAALCNRPTGYLNTPLTVVAVGLAKWLDIYSGVLMVRVLLSWFPNIHWDRQPLSTIRDLCDPYLNLFRNIIPLIFDTLDVSPLLAFAVL

Query:  GTLGSILSSSAGMY
        GTLGSIL+SS GMY
Subjt:  GTLGSILSSSAGMY

A0A6N2KF64 Uncharacterized protein2.8e-4491.26Show/hide
Query:  WAALCNRPTGYLNTPLTVVAVGLAKWLDIYSGVLMVRVLLSWFPNIHWDRQPLSTIRDLCDPYLNLFRNIIPLIFDTLDVSPLLAFAVLGTLGSILSSSA
        +AAL +RPTGYLNTPLTVVA GLAKWLDIYSGVLMVRVLLSWFPNI WDRQPLS IRDLCDPYLNLFRNIIP IFDTLDVSPLLAFAVLGTLGSIL+SS 
Subjt:  WAALCNRPTGYLNTPLTVVAVGLAKWLDIYSGVLMVRVLLSWFPNIHWDRQPLSTIRDLCDPYLNLFRNIIPLIFDTLDVSPLLAFAVLGTLGSILSSSA

Query:  GMY
        GMY
Subjt:  GMY

A0A6P4AMM0 ylmG homolog protein 1-2, chloroplastic-like8.2e-4490.29Show/hide
Query:  WAALCNRPTGYLNTPLTVVAVGLAKWLDIYSGVLMVRVLLSWFPNIHWDRQPLSTIRDLCDPYLNLFRNIIPLIFDTLDVSPLLAFAVLGTLGSILSSSA
        +AAL +RP+GYLNTPLTVVA GLAKWLDIYSGVLMVRVLLSWFPNI WDRQPLS IRDLCDPYLNLFRNIIP IFDTLDVSPLLAFAVLGTLGSIL+SS 
Subjt:  WAALCNRPTGYLNTPLTVVAVGLAKWLDIYSGVLMVRVLLSWFPNIHWDRQPLSTIRDLCDPYLNLFRNIIPLIFDTLDVSPLLAFAVLGTLGSILSSSA

Query:  GMY
        GMY
Subjt:  GMY

SwissProt top hitse value%identityAlignment
O78424 Uncharacterized protein ycf194.4e-1035.63Show/hide
Query:  LNTPLTVVAVGLAKWLDIYSGVLMVRVLLSWFPNIHWDRQPLSTIRDLCDPYLNLFRNIIPLIFDTLDVSPLLAFAVLGTLGSILSS
        ++   T++      +L IY  +L++RV L+WFPN++W  QP  ++  + DPYL +FR I+P +   +D+SP+L F +L  +  I+S+
Subjt:  LNTPLTVVAVGLAKWLDIYSGVLMVRVLLSWFPNIHWDRQPLSTIRDLCDPYLNLFRNIIPLIFDTLDVSPLLAFAVLGTLGSILSS

Q9C595 YlmG homolog protein 2, chloroplastic5.7e-1051.28Show/hide
Query:  VVAVGLAKWLDIYSGVLMVRVLLSWFPNI-HWDRQPLSTIRDLCDPYLNLFRNIIPLIFDTLDVSPLLAFAVLGTLGS
        VVA GL  +L+IY+ +L+VR++L+WFP+       PLST   LCDPYLN+FR  IP +   LD+SP+LAF VL    S
Subjt:  VVAVGLAKWLDIYSGVLMVRVLLSWFPNI-HWDRQPLSTIRDLCDPYLNLFRNIIPLIFDTLDVSPLLAFAVLGTLGS

Q9SRS3 YlmG homolog protein 1-1, chloroplastic1.1e-4285.15Show/hide
Query:  WAALCNRPTGYLNTPLTVVAVGLAKWLDIYSGVLMVRVLLSWFPNIHWDRQPLSTIRDLCDPYLNLFRNIIPLIFDTLDVSPLLAFAVLGTLGSILSSSA
        +A+L +RP GYLNTPLTVVAVG+ KWLDIYSGVLMVRVLLSWFPNI W+RQPLS IRDLCDPYLNLFRNIIP IFDTLDVSPLLAFAVLGTLGSI+  S 
Subjt:  WAALCNRPTGYLNTPLTVVAVGLAKWLDIYSGVLMVRVLLSWFPNIHWDRQPLSTIRDLCDPYLNLFRNIIPLIFDTLDVSPLLAFAVLGTLGSILSSSA

Query:  G
        G
Subjt:  G

Q9SUE0 YlmG homolog protein 1-2, chloroplastic1.0e-4386.14Show/hide
Query:  WAALCNRPTGYLNTPLTVVAVGLAKWLDIYSGVLMVRVLLSWFPNIHWDRQPLSTIRDLCDPYLNLFRNIIPLIFDTLDVSPLLAFAVLGTLGSILSSSA
        +A+L +RP GYLNTPLTVVA GL+KWLDIYSGVLMVRVLLSWFPNI WDRQPLS IRDLCDPYLNLFRNIIP +FDTLDVSPLLAFAVLGTLGSIL++S 
Subjt:  WAALCNRPTGYLNTPLTVVAVGLAKWLDIYSGVLMVRVLLSWFPNIHWDRQPLSTIRDLCDPYLNLFRNIIPLIFDTLDVSPLLAFAVLGTLGSILSSSA

Query:  G
        G
Subjt:  G

Q9TM45 Uncharacterized protein ycf192.4e-0838.89Show/hide
Query:  WLDIYSGVLMVRVLLSWFPNIHWDRQPLSTIRDLCDPYLNLFRNIIPLIFDTLDVSPLLAFAVLGTLGSILS
        +L IY  ++++R+ L WFPNI+W  QP  ++  L DPYLNLF  + P  F  +D SP++   ++  +  +LS
Subjt:  WLDIYSGVLMVRVLLSWFPNIHWDRQPLSTIRDLCDPYLNLFRNIIPLIFDTLDVSPLLAFAVLGTLGSILS

Arabidopsis top hitse value%identityAlignment
AT3G07430.1 YGGT family protein8.1e-4485.15Show/hide
Query:  WAALCNRPTGYLNTPLTVVAVGLAKWLDIYSGVLMVRVLLSWFPNIHWDRQPLSTIRDLCDPYLNLFRNIIPLIFDTLDVSPLLAFAVLGTLGSILSSSA
        +A+L +RP GYLNTPLTVVAVG+ KWLDIYSGVLMVRVLLSWFPNI W+RQPLS IRDLCDPYLNLFRNIIP IFDTLDVSPLLAFAVLGTLGSI+  S 
Subjt:  WAALCNRPTGYLNTPLTVVAVGLAKWLDIYSGVLMVRVLLSWFPNIHWDRQPLSTIRDLCDPYLNLFRNIIPLIFDTLDVSPLLAFAVLGTLGSILSSSA

Query:  G
        G
Subjt:  G

AT4G27990.1 YGGT family protein7.4e-4586.14Show/hide
Query:  WAALCNRPTGYLNTPLTVVAVGLAKWLDIYSGVLMVRVLLSWFPNIHWDRQPLSTIRDLCDPYLNLFRNIIPLIFDTLDVSPLLAFAVLGTLGSILSSSA
        +A+L +RP GYLNTPLTVVA GL+KWLDIYSGVLMVRVLLSWFPNI WDRQPLS IRDLCDPYLNLFRNIIP +FDTLDVSPLLAFAVLGTLGSIL++S 
Subjt:  WAALCNRPTGYLNTPLTVVAVGLAKWLDIYSGVLMVRVLLSWFPNIHWDRQPLSTIRDLCDPYLNLFRNIIPLIFDTLDVSPLLAFAVLGTLGSILSSSA

Query:  G
        G
Subjt:  G

AT5G21920.1 YGGT family protein4.1e-1151.28Show/hide
Query:  VVAVGLAKWLDIYSGVLMVRVLLSWFPNI-HWDRQPLSTIRDLCDPYLNLFRNIIPLIFDTLDVSPLLAFAVLGTLGS
        VVA GL  +L+IY+ +L+VR++L+WFP+       PLST   LCDPYLN+FR  IP +   LD+SP+LAF VL    S
Subjt:  VVAVGLAKWLDIYSGVLMVRVLLSWFPNI-HWDRQPLSTIRDLCDPYLNLFRNIIPLIFDTLDVSPLLAFAVLGTLGS

AT5G21920.2 YGGT family protein4.1e-1151.28Show/hide
Query:  VVAVGLAKWLDIYSGVLMVRVLLSWFPNI-HWDRQPLSTIRDLCDPYLNLFRNIIPLIFDTLDVSPLLAFAVLGTLGS
        VVA GL  +L+IY+ +L+VR++L+WFP+       PLST   LCDPYLN+FR  IP +   LD+SP+LAF VL    S
Subjt:  VVAVGLAKWLDIYSGVLMVRVLLSWFPNI-HWDRQPLSTIRDLCDPYLNLFRNIIPLIFDTLDVSPLLAFAVLGTLGS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGGATACTTGCAACCTTACCTATATTTCTTTTTATTACATAACCAGCTCCTCAAACATCATTTATCATAATGATGTTATAATAACTTGCTCCTCAAACACCATTTA
TAGTAACTCATCGTGGGCCGCCCTATGCAACCGCCCCACCGGCTACCTCAACACGCCTCTCACCGTGGTAGCCGTCGGCCTCGCCAAGTGGCTTGACATCTACAGCGGGG
TTTTGATGGTTAGGGTTTTGCTCAGTTGGTTCCCCAACATCCACTGGGACCGCCAACCCCTCTCTACCATTCGTGATCTCTGCGATCCCTACTTGAACTTGTTTCGAAAT
ATCATTCCTCTCATATTTGACACCCTCGATGTTAGCCCGCTCCTGGCCTTTGCGGTTCTCGGCACACTCGGCTCAATCCTCAGCAGTAGTGCAGGCATGTATTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCGGATACTTGCAACCTTACCTATATTTCTTTTTATTACATAACCAGCTCCTCAAACATCATTTATCATAATGATGTTATAATAACTTGCTCCTCAAACACCATTTA
TAGTAACTCATCGTGGGCCGCCCTATGCAACCGCCCCACCGGCTACCTCAACACGCCTCTCACCGTGGTAGCCGTCGGCCTCGCCAAGTGGCTTGACATCTACAGCGGGG
TTTTGATGGTTAGGGTTTTGCTCAGTTGGTTCCCCAACATCCACTGGGACCGCCAACCCCTCTCTACCATTCGTGATCTCTGCGATCCCTACTTGAACTTGTTTCGAAAT
ATCATTCCTCTCATATTTGACACCCTCGATGTTAGCCCGCTCCTGGCCTTTGCGGTTCTCGGCACACTCGGCTCAATCCTCAGCAGTAGTGCAGGCATGTATTGA
Protein sequenceShow/hide protein sequence
MSDTCNLTYISFYYITSSSNIIYHNDVIITCSSNTIYSNSSWAALCNRPTGYLNTPLTVVAVGLAKWLDIYSGVLMVRVLLSWFPNIHWDRQPLSTIRDLCDPYLNLFRN
IIPLIFDTLDVSPLLAFAVLGTLGSILSSSAGMY