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Sed0008313 (gene) of Chayote v1 genome

Gene IDSed0008313
OrganismSechium edule (Chayote v1)
Descriptiontranscription factor bHLH146-like
Genome locationLG03:45084378..45086582
RNA-Seq ExpressionSed0008313
SyntenySed0008313
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR044660 - Transcription factor IBH1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6598877.1 Transcription factor IBH1, partial [Cucurbita argyrosperma subsp. sororia]2.7e-2671.57Show/hide
Query:  MAMAQSATEFAWGNALKKKLLIQRQEVCNNGFDFPLQTVKFFQDKNLEREEEGEEKKMENGLMKLRKILPGGNGDS--NGYLEEDDLLKQTESYIKCLEL
        MAMA+SAT+FAWGNALKKKLL   Q    NGFDF LQT+KF ++ NLEREEE EE+KMENGL +LRKI+PGG G    NG LEE++LLKQTESYIKCLEL
Subjt:  MAMAQSATEFAWGNALKKKLLIQRQEVCNNGFDFPLQTVKFFQDKNLEREEEGEEKKMENGLMKLRKILPGGNGDS--NGYLEEDDLLKQTESYIKCLEL

Query:  QM
        Q+
Subjt:  QM
XP_022153354.1 transcription factor bHLH146 [Momordica charantia]6.0e-2671.03Show/hide
Query:  MAMAQSATEFAWGNALKKKLLIQRQEVCN----NGFDFPLQTVKFFQDKNLEREEEGEEKKMENGLMKLRKILPGG--NGDSNG-YLEEDDLLKQTESYI
        MAMA SA+EFAWG+ALK+KLL Q+QE  N    N FDF LQT+KF ++K  E EEE ++KKMENGL+KLRKILPGG  N DSNG  LEEDDLLKQTESYI
Subjt:  MAMAQSATEFAWGNALKKKLLIQRQEVCN----NGFDFPLQTVKFFQDKNLEREEEGEEKKMENGLMKLRKILPGG--NGDSNG-YLEEDDLLKQTESYI

Query:  KCLELQM
        KCLELQ+
Subjt:  KCLELQM
XP_022929709.1 transcription factor bHLH146-like [Cucurbita moschata]2.7e-2671.57Show/hide
Query:  MAMAQSATEFAWGNALKKKLLIQRQEVCNNGFDFPLQTVKFFQDKNLEREEEGEEKKMENGLMKLRKILPGGNGDS--NGYLEEDDLLKQTESYIKCLEL
        MAMA+SAT+FAWGNALKKKLL   Q    NGFDF LQT+KF ++ NLEREEE EE+KMENGL +LRKI+PGG G    NG LEE++LLKQTESYIKCLEL
Subjt:  MAMAQSATEFAWGNALKKKLLIQRQEVCNNGFDFPLQTVKFFQDKNLEREEEGEEKKMENGLMKLRKILPGGNGDS--NGYLEEDDLLKQTESYIKCLEL

Query:  QM
        Q+
Subjt:  QM
XP_022996791.1 transcription factor bHLH146-like [Cucurbita maxima]2.1e-2671.15Show/hide
Query:  MAMAQSATEFAWGNALKKKLLIQRQEVCNNGFDFPLQTVKFFQDKNLEREEEGEEKKMENGLMKLRKILPGGNGDS----NGYLEEDDLLKQTESYIKCL
        MAMA+SAT+FAWGNALKKKLL   Q    NGFDF LQT+KF ++ NLEREEE EE+KMENGL KLRKI+PGG G      NG LEE++LLKQTESYIKCL
Subjt:  MAMAQSATEFAWGNALKKKLLIQRQEVCNNGFDFPLQTVKFFQDKNLEREEEGEEKKMENGLMKLRKILPGGNGDS----NGYLEEDDLLKQTESYIKCL

Query:  ELQM
        ELQ+
Subjt:  ELQM
XP_023538247.1 transcription factor bHLH146-like [Cucurbita pepo subsp. pepo]5.4e-2772.12Show/hide
Query:  MAMAQSATEFAWGNALKKKLLIQRQEVCNNGFDFPLQTVKFFQDKNLERE----EEGEEKKMENGLMKLRKILPGGNGDSNGYLEEDDLLKQTESYIKCL
        MAMAQSATEF+WGNALKKKLL +     +NGF F LQTVKF Q+ NLERE    EE +E K+ENGLMKLRKI+PGG   SNG LEEDDL KQTESYIKCL
Subjt:  MAMAQSATEFAWGNALKKKLLIQRQEVCNNGFDFPLQTVKFFQDKNLERE----EEGEEKKMENGLMKLRKILPGGNGDSNGYLEEDDLLKQTESYIKCL

Query:  ELQM
        ELQ+
Subjt:  ELQM
TrEMBL top hitse value%identityAlignment
A0A6J1DIU0 transcription factor bHLH1462.9e-2671.03Show/hide
Query:  MAMAQSATEFAWGNALKKKLLIQRQEVCN----NGFDFPLQTVKFFQDKNLEREEEGEEKKMENGLMKLRKILPGG--NGDSNG-YLEEDDLLKQTESYI
        MAMA SA+EFAWG+ALK+KLL Q+QE  N    N FDF LQT+KF ++K  E EEE ++KKMENGL+KLRKILPGG  N DSNG  LEEDDLLKQTESYI
Subjt:  MAMAQSATEFAWGNALKKKLLIQRQEVCN----NGFDFPLQTVKFFQDKNLEREEEGEEKKMENGLMKLRKILPGG--NGDSNG-YLEEDDLLKQTESYI

Query:  KCLELQM
        KCLELQ+
Subjt:  KCLELQM
A0A6J1EPJ9 transcription factor bHLH146-like1.3e-2671.57Show/hide
Query:  MAMAQSATEFAWGNALKKKLLIQRQEVCNNGFDFPLQTVKFFQDKNLEREEEGEEKKMENGLMKLRKILPGGNGDS--NGYLEEDDLLKQTESYIKCLEL
        MAMA+SAT+FAWGNALKKKLL   Q    NGFDF LQT+KF ++ NLEREEE EE+KMENGL +LRKI+PGG G    NG LEE++LLKQTESYIKCLEL
Subjt:  MAMAQSATEFAWGNALKKKLLIQRQEVCNNGFDFPLQTVKFFQDKNLEREEEGEEKKMENGLMKLRKILPGGNGDS--NGYLEEDDLLKQTESYIKCLEL

Query:  QM
        Q+
Subjt:  QM
A0A6J1FJ33 transcription factor bHLH146-like6.5e-2668.22Show/hide
Query:  MAMAQSATEFAWGNALKKKLLIQRQEVCNNGFDFPLQTVKFFQDKNLERE-------EEGEEKKMENGLMKLRKILPGGNGDSNGYLEEDDLLKQTESYI
        MAMAQSATEF+WGNALKKKLL +     +NGF   LQ VKF ++ NLERE       EE EE+K+ENGLMKLRKI+PGG   SNG LEEDDL KQTESYI
Subjt:  MAMAQSATEFAWGNALKKKLLIQRQEVCNNGFDFPLQTVKFFQDKNLERE-------EEGEEKKMENGLMKLRKILPGGNGDSNGYLEEDDLLKQTESYI

Query:  KCLELQM
        KCLELQ+
Subjt:  KCLELQM
A0A6J1I0E6 transcription factor bHLH146-like7.1e-2566.36Show/hide
Query:  MAMAQSATEFAWGNALKKKLLIQRQEVCNNGFDFPLQTVKFFQDKNLERE----------EEGEEKKMENGLMKLRKILPGGNGDSNGYLEEDDLLKQTE
        MAMAQSATEF+WGNALKKKLL +  +  +NGF F L  VKF ++ NLERE          EE EE+K+ENGLMKLRKI+PGG   SNG LEEDDL KQTE
Subjt:  MAMAQSATEFAWGNALKKKLLIQRQEVCNNGFDFPLQTVKFFQDKNLERE----------EEGEEKKMENGLMKLRKILPGGNGDSNGYLEEDDLLKQTE

Query:  SYIKCLELQM
        SYIKCLELQ+
Subjt:  SYIKCLELQM
A0A6J1K5R7 transcription factor bHLH146-like1.0e-2671.15Show/hide
Query:  MAMAQSATEFAWGNALKKKLLIQRQEVCNNGFDFPLQTVKFFQDKNLEREEEGEEKKMENGLMKLRKILPGGNGDS----NGYLEEDDLLKQTESYIKCL
        MAMA+SAT+FAWGNALKKKLL   Q    NGFDF LQT+KF ++ NLEREEE EE+KMENGL KLRKI+PGG G      NG LEE++LLKQTESYIKCL
Subjt:  MAMAQSATEFAWGNALKKKLLIQRQEVCNNGFDFPLQTVKFFQDKNLEREEEGEEKKMENGLMKLRKILPGGNGDS----NGYLEEDDLLKQTESYIKCL

Query:  ELQM
        ELQ+
Subjt:  ELQM
SwissProt top hitse value%identityAlignment
Q9SUM5 Transcription factor bHLH1467.9e-0537.5Show/hide
Query:  MAMAQSATEFAWGNALKKKLLIQRQEVCNNGFDFPLQTVKFFQD--KNLER-EEEG--EEKKMENGLMKLRKILPGGNGDSNGYLEEDDLLKQTESYIKC
        MA+A SA EFAW   L +KL         +    P  T     D  + LER ++EG  EE  +E  L +L+K+LPGG       +  +++L +  +YIKC
Subjt:  MAMAQSATEFAWGNALKKKLLIQRQEVCNNGFDFPLQTVKFFQD--KNLER-EEEG--EEKKMENGLMKLRKILPGGNGDSNGYLEEDDLLKQTESYIKC

Query:  LELQ
        LELQ
Subjt:  LELQ
Arabidopsis top hitse value%identityAlignment
AT2G18969.1 BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors6.6e-0733.04Show/hide
Query:  MAMAQSATEFAWGNALKKKLLIQRQEVCNNGFDFPLQT------------VKFFQDKNLEREEEGEEKKMENGLMKLRKILPGGNGDSNGYLEEDDLLKQ
        MA A SA EFAW   L++KLL       ++ +D P+ T             +   +K+ + +EE E  +++  L +L+K+LPGG       +  +++L +
Subjt:  MAMAQSATEFAWGNALKKKLLIQRQEVCNNGFDFPLQT------------VKFFQDKNLEREEEGEEKKMENGLMKLRKILPGGNGDSNGYLEEDDLLKQ

Query:  TESYIKCLELQM
          SYI CLELQM
Subjt:  TESYIKCLELQM
AT4G30180.1 sequence-specific DNA binding transcription factors;transcription regulators5.6e-0637.5Show/hide
Query:  MAMAQSATEFAWGNALKKKLLIQRQEVCNNGFDFPLQTVKFFQD--KNLER-EEEG--EEKKMENGLMKLRKILPGGNGDSNGYLEEDDLLKQTESYIKC
        MA+A SA EFAW   L +KL         +    P  T     D  + LER ++EG  EE  +E  L +L+K+LPGG       +  +++L +  +YIKC
Subjt:  MAMAQSATEFAWGNALKKKLLIQRQEVCNNGFDFPLQTVKFFQD--KNLER-EEEG--EEKKMENGLMKLRKILPGGNGDSNGYLEEDDLLKQTESYIKC

Query:  LELQ
        LELQ
Subjt:  LELQ

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAATGGCTCAATCAGCAACTGAATTTGCATGGGGAAATGCTCTAAAAAAGAAGCTTCTAATTCAAAGACAAGAAGTTTGCAATAATGGTTTTGATTTTCCTCTCCA
AACAGTGAAATTTTTTCAAGATAAAAATTTAGAAAGAGAAGAAGAAGGAGAAGAGAAAAAGATGGAAAATGGATTGATGAAGCTGAGAAAAATCTTACCAGGTGGTAATG
GTGATTCTAATGGATATTTGGAAGAAGATGATTTGTTGAAACAAACTGAAAGCTATATAAAATGTCTTGAATTGCAGATGAAAGATAGATCCTGGTACTACAAAAACAAT
TCTAGATATGGTGTTGATCAGAGACCATGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAATGGCTCAATCAGCAACTGAATTTGCATGGGGAAATGCTCTAAAAAAGAAGCTTCTAATTCAAAGACAAGAAGTTTGCAATAATGGTTTTGATTTTCCTCTCCA
AACAGTGAAATTTTTTCAAGATAAAAATTTAGAAAGAGAAGAAGAAGGAGAAGAGAAAAAGATGGAAAATGGATTGATGAAGCTGAGAAAAATCTTACCAGGTGGTAATG
GTGATTCTAATGGATATTTGGAAGAAGATGATTTGTTGAAACAAACTGAAAGCTATATAAAATGTCTTGAATTGCAGATGAAAGATAGATCCTGGTACTACAAAAACAAT
TCTAGATATGGTGTTGATCAGAGACCATGGTAA
Protein sequenceShow/hide protein sequence
MAMAQSATEFAWGNALKKKLLIQRQEVCNNGFDFPLQTVKFFQDKNLEREEEGEEKKMENGLMKLRKILPGGNGDSNGYLEEDDLLKQTESYIKCLELQMKDRSWYYKNN
SRYGVDQRPW