; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0008322 (gene) of Chayote v1 genome

Gene IDSed0008322
OrganismSechium edule (Chayote v1)
Description30S ribosomal protein S4, chloroplastic
Genome locationLG13:18478918..18479541
RNA-Seq ExpressionSed0008322
SyntenySed0008322
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0015935 - small ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0019843 - rRNA binding (molecular function)
InterPro domainsIPR001912 - Ribosomal protein S4/S9, N-terminal
IPR002942 - RNA-binding S4 domain
IPR005709 - Ribosomal protein S4, bacterial-type
IPR018079 - Ribosomal protein S4, conserved site
IPR022801 - Ribosomal protein S4/S9
IPR036986 - RNA-binding S4 domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
QJR52958.1 ribosomal protein S4 [Herpetospermum pedunculosum]3.2e-10499Show/hide
Query:  MSRYRGPRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGM
        MSRYRGPRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGM
Subjt:  MSRYRGPRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGM

Query:  ASTIPQARQLVNHRHILVNGSIVDIPSYRCKPRDIITGKEEKKSRALIQNYLDSSPPQELPKHLTLQPLQYKGLVNQIIDSKWVSLKINELLVVEYYSRQ
        ASTIPQARQLVNHRHILVNGSIVDIPSYRCKPRDIIT KEEKKSRALIQNYLDSSPPQELPKHLTLQPLQYKGLVNQIID+KWVSLKINELLVVEYYSRQ
Subjt:  ASTIPQARQLVNHRHILVNGSIVDIPSYRCKPRDIITGKEEKKSRALIQNYLDSSPPQELPKHLTLQPLQYKGLVNQIIDSKWVSLKINELLVVEYYSRQ

Query:  T
        T
Subjt:  T

QZL38595.1 ribosomal protein S4 [Citrullus naudinianus]9.2e-10498.51Show/hide
Query:  MSRYRGPRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGM
        MSRYRGPRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGM
Subjt:  MSRYRGPRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGM

Query:  ASTIPQARQLVNHRHILVNGSIVDIPSYRCKPRDIITGKEEKKSRALIQNYLDSSPPQELPKHLTLQPLQYKGLVNQIIDSKWVSLKINELLVVEYYSRQ
        ASTIPQARQLVNHRHILVNGSI DIPSYRCKPRDIIT K+EKKSRALIQNYLDSSPPQELPKHLTLQPLQYKGLVNQIIDSKWVSLKINELLVVEYYSRQ
Subjt:  ASTIPQARQLVNHRHILVNGSIVDIPSYRCKPRDIITGKEEKKSRALIQNYLDSSPPQELPKHLTLQPLQYKGLVNQIIDSKWVSLKINELLVVEYYSRQ

Query:  T
        T
Subjt:  T

YP_009456148.1 ribosomal protein S4 [Lagenaria siceraria]3.2e-10499Show/hide
Query:  MSRYRGPRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGM
        MSRYRGPRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGM
Subjt:  MSRYRGPRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGM

Query:  ASTIPQARQLVNHRHILVNGSIVDIPSYRCKPRDIITGKEEKKSRALIQNYLDSSPPQELPKHLTLQPLQYKGLVNQIIDSKWVSLKINELLVVEYYSRQ
        ASTIPQARQLVNHRHILVNGSIVDIPSYRCKPRDIIT K+EKKSRALIQNYLDSSPPQELPKHLTLQPLQYKGLVNQIIDSKWVSLKINELLVVEYYSRQ
Subjt:  ASTIPQARQLVNHRHILVNGSIVDIPSYRCKPRDIITGKEEKKSRALIQNYLDSSPPQELPKHLTLQPLQYKGLVNQIIDSKWVSLKINELLVVEYYSRQ

Query:  T
        T
Subjt:  T

YP_009945419.1 ribosomal protein S4 [Sechium edule]2.9e-105100Show/hide
Query:  MSRYRGPRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGM
        MSRYRGPRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGM
Subjt:  MSRYRGPRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGM

Query:  ASTIPQARQLVNHRHILVNGSIVDIPSYRCKPRDIITGKEEKKSRALIQNYLDSSPPQELPKHLTLQPLQYKGLVNQIIDSKWVSLKINELLVVEYYSRQ
        ASTIPQARQLVNHRHILVNGSIVDIPSYRCKPRDIITGKEEKKSRALIQNYLDSSPPQELPKHLTLQPLQYKGLVNQIIDSKWVSLKINELLVVEYYSRQ
Subjt:  ASTIPQARQLVNHRHILVNGSIVDIPSYRCKPRDIITGKEEKKSRALIQNYLDSSPPQELPKHLTLQPLQYKGLVNQIIDSKWVSLKINELLVVEYYSRQ

Query:  T
        T
Subjt:  T

YP_010131096.1 ribosomal protein S4 [Benincasa hispida]7.0e-10498.51Show/hide
Query:  MSRYRGPRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGM
        MSRYRGPRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGM
Subjt:  MSRYRGPRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGM

Query:  ASTIPQARQLVNHRHILVNGSIVDIPSYRCKPRDIITGKEEKKSRALIQNYLDSSPPQELPKHLTLQPLQYKGLVNQIIDSKWVSLKINELLVVEYYSRQ
        ASTIPQARQLVNHRHILVNGSIVDIPSYRCKPRDIIT K+EKKSRAL+QNYLDSSPPQELPKHLTLQPLQYKGLVNQIIDSKWVSLKINELLVVEYYSRQ
Subjt:  ASTIPQARQLVNHRHILVNGSIVDIPSYRCKPRDIITGKEEKKSRALIQNYLDSSPPQELPKHLTLQPLQYKGLVNQIIDSKWVSLKINELLVVEYYSRQ

Query:  T
        T
Subjt:  T

TrEMBL top hitse value%identityAlignment
A0A6H0EQJ1 30S ribosomal protein S4, chloroplastic1.4e-105100Show/hide
Query:  MSRYRGPRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGM
        MSRYRGPRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGM
Subjt:  MSRYRGPRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGM

Query:  ASTIPQARQLVNHRHILVNGSIVDIPSYRCKPRDIITGKEEKKSRALIQNYLDSSPPQELPKHLTLQPLQYKGLVNQIIDSKWVSLKINELLVVEYYSRQ
        ASTIPQARQLVNHRHILVNGSIVDIPSYRCKPRDIITGKEEKKSRALIQNYLDSSPPQELPKHLTLQPLQYKGLVNQIIDSKWVSLKINELLVVEYYSRQ
Subjt:  ASTIPQARQLVNHRHILVNGSIVDIPSYRCKPRDIITGKEEKKSRALIQNYLDSSPPQELPKHLTLQPLQYKGLVNQIIDSKWVSLKINELLVVEYYSRQ

Query:  T
        T
Subjt:  T

A0A6H0ET69 30S ribosomal protein S4, chloroplastic1.5e-10499Show/hide
Query:  MSRYRGPRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGM
        MSRYRGPRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGM
Subjt:  MSRYRGPRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGM

Query:  ASTIPQARQLVNHRHILVNGSIVDIPSYRCKPRDIITGKEEKKSRALIQNYLDSSPPQELPKHLTLQPLQYKGLVNQIIDSKWVSLKINELLVVEYYSRQ
        ASTIPQARQLVNHRHILVNGSIVDIPSYRCKPRDIIT K+EKKSRALIQNYLDSSPPQELPKHLTLQPLQYKGLVNQIIDSKWVSLKINELLVVEYYSRQ
Subjt:  ASTIPQARQLVNHRHILVNGSIVDIPSYRCKPRDIITGKEEKKSRALIQNYLDSSPPQELPKHLTLQPLQYKGLVNQIIDSKWVSLKINELLVVEYYSRQ

Query:  T
        T
Subjt:  T

A0A6H0EVH0 30S ribosomal protein S4, chloroplastic1.5e-10499Show/hide
Query:  MSRYRGPRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGM
        MSRYRGPRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGM
Subjt:  MSRYRGPRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGM

Query:  ASTIPQARQLVNHRHILVNGSIVDIPSYRCKPRDIITGKEEKKSRALIQNYLDSSPPQELPKHLTLQPLQYKGLVNQIIDSKWVSLKINELLVVEYYSRQ
        ASTIPQARQLVNHRHILVNGSIVDIPSYRCKPRDIIT K+EKKSRALIQNYLDSSPPQELPKHLTLQPLQYKGLVNQIIDSKWVSLKINELLVVEYYSRQ
Subjt:  ASTIPQARQLVNHRHILVNGSIVDIPSYRCKPRDIITGKEEKKSRALIQNYLDSSPPQELPKHLTLQPLQYKGLVNQIIDSKWVSLKINELLVVEYYSRQ

Query:  T
        T
Subjt:  T

A0A6H0EW03 30S ribosomal protein S4, chloroplastic1.5e-10499Show/hide
Query:  MSRYRGPRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGM
        MSRYRGPRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGM
Subjt:  MSRYRGPRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGM

Query:  ASTIPQARQLVNHRHILVNGSIVDIPSYRCKPRDIITGKEEKKSRALIQNYLDSSPPQELPKHLTLQPLQYKGLVNQIIDSKWVSLKINELLVVEYYSRQ
        ASTIPQARQLVNHRHILVNGSIVDIPSYRCKPRDIIT K+EKKSRALIQNYLDSSPPQELPKHLTLQPLQYKGLVNQIIDSKWVSLKINELLVVEYYSRQ
Subjt:  ASTIPQARQLVNHRHILVNGSIVDIPSYRCKPRDIITGKEEKKSRALIQNYLDSSPPQELPKHLTLQPLQYKGLVNQIIDSKWVSLKINELLVVEYYSRQ

Query:  T
        T
Subjt:  T

X2F260 30S ribosomal protein S4, chloroplastic1.5e-10499Show/hide
Query:  MSRYRGPRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGM
        MSRYRGPRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGM
Subjt:  MSRYRGPRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGM

Query:  ASTIPQARQLVNHRHILVNGSIVDIPSYRCKPRDIITGKEEKKSRALIQNYLDSSPPQELPKHLTLQPLQYKGLVNQIIDSKWVSLKINELLVVEYYSRQ
        ASTIPQARQLVNHRHILVNGSIVDIPSYRCKPRDIIT K+EKKSRALIQNYLDSSPPQELPKHLTLQPLQYKGLVNQIIDSKWVSLKINELLVVEYYSRQ
Subjt:  ASTIPQARQLVNHRHILVNGSIVDIPSYRCKPRDIITGKEEKKSRALIQNYLDSSPPQELPKHLTLQPLQYKGLVNQIIDSKWVSLKINELLVVEYYSRQ

Query:  T
        T
Subjt:  T

SwissProt top hitse value%identityAlignment
A0A337 30S ribosomal protein S4, chloroplastic2.7e-9891.04Show/hide
Query:  MSRYRGPRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGM
        MSRYRGPRFKKIRRLGALPGLT+K+P+ GNDL+NQ RSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGM
Subjt:  MSRYRGPRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGM

Query:  ASTIPQARQLVNHRHILVNGSIVDIPSYRCKPRDIITGKEEKKSRALIQNYLDSSPPQELPKHLTLQPLQYKGLVNQIIDSKWVSLKINELLVVEYYSRQ
        ASTIP ARQLVNHRHILVNG IVDIPSYRCKPRDIITGK+E+KSRALIQ  LDSSP +ELP HLTL P QYKGLVNQIIDSKWV LKINELLVVEYYSRQ
Subjt:  ASTIPQARQLVNHRHILVNGSIVDIPSYRCKPRDIITGKEEKKSRALIQNYLDSSPPQELPKHLTLQPLQYKGLVNQIIDSKWVSLKINELLVVEYYSRQ

Query:  T
        T
Subjt:  T

A6MM38 30S ribosomal protein S4, chloroplastic3.2e-9992.04Show/hide
Query:  MSRYRGPRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGM
        MSRYRGPRFKKIRRLGALPGLTSKRP+ G+DL+NQSRSGK+SQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGM
Subjt:  MSRYRGPRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGM

Query:  ASTIPQARQLVNHRHILVNGSIVDIPSYRCKPRDIITGKEEKKSRALIQNYLDSSPPQELPKHLTLQPLQYKGLVNQIIDSKWVSLKINELLVVEYYSRQ
        ASTIP ARQLVNHRHILVNG IVDIPSYRCKPRDIIT K+E+KSRALIQNYLDSSP +ELPKHLTL   QYKGLVNQIIDSKWV LKINELLVVEYYSRQ
Subjt:  ASTIPQARQLVNHRHILVNGSIVDIPSYRCKPRDIITGKEEKKSRALIQNYLDSSPPQELPKHLTLQPLQYKGLVNQIIDSKWVSLKINELLVVEYYSRQ

Query:  T
        T
Subjt:  T

Q1KXV7 30S ribosomal protein S4, chloroplastic4.6e-9890.55Show/hide
Query:  MSRYRGPRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGM
        MSRYRGPRFKKIRRLGALPGLT+KRP+ G+DL+NQSRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGM
Subjt:  MSRYRGPRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGM

Query:  ASTIPQARQLVNHRHILVNGSIVDIPSYRCKPRDIITGKEEKKSRALIQNYLDSSPPQELPKHLTLQPLQYKGLVNQIIDSKWVSLKINELLVVEYYSRQ
        A TIP ARQLVNHRHILVNG IVDIPSYRCKPRD I  ++E+KSRALIQN LDSSPP+ELP HLTLQP QYKGLVNQIIDSKWV LKINELLVVEYYSRQ
Subjt:  ASTIPQARQLVNHRHILVNGSIVDIPSYRCKPRDIITGKEEKKSRALIQNYLDSSPPQELPKHLTLQPLQYKGLVNQIIDSKWVSLKINELLVVEYYSRQ

Query:  T
        T
Subjt:  T

Q49KZ6 30S ribosomal protein S4, chloroplastic1.9e-9990.55Show/hide
Query:  MSRYRGPRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGM
        MSRYRGPRFKKIRRLGALPGLTSKRP+ G+DL+NQSRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGM
Subjt:  MSRYRGPRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGM

Query:  ASTIPQARQLVNHRHILVNGSIVDIPSYRCKPRDIITGKEEKKSRALIQNYLDSSPPQELPKHLTLQPLQYKGLVNQIIDSKWVSLKINELLVVEYYSRQ
        ASTIPQARQLVNHRHILVNG IVDIPSYRCKPRDIIT ++++KSRA+IQNY DSSP +E+PKHLTL P QYKGLVNQIIDSKW+ LKINELLVVEYYSRQ
Subjt:  ASTIPQARQLVNHRHILVNGSIVDIPSYRCKPRDIITGKEEKKSRALIQNYLDSSPPQELPKHLTLQPLQYKGLVNQIIDSKWVSLKINELLVVEYYSRQ

Query:  T
        T
Subjt:  T

Q4VZH3 30S ribosomal protein S4, chloroplastic1.0e-10598.01Show/hide
Query:  MSRYRGPRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGM
        MSRYR PRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGM
Subjt:  MSRYRGPRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGM

Query:  ASTIPQARQLVNHRHILVNGSIVDIPSYRCKPRDIITGKEEKKSRALIQNYLDSSPPQELPKHLTLQPLQYKGLVNQIIDSKWVSLKINELLVVEYYSRQ
        ASTIPQARQLVNHRHILVNGSIVDIPSYRCKPRDIIT K+EKKSR LIQNYLDSSPPQELPKHLTLQPLQYKGLVNQIIDSKWVSLKINELLVVEYYSRQ
Subjt:  ASTIPQARQLVNHRHILVNGSIVDIPSYRCKPRDIITGKEEKKSRALIQNYLDSSPPQELPKHLTLQPLQYKGLVNQIIDSKWVSLKINELLVVEYYSRQ

Query:  T
        T
Subjt:  T

Arabidopsis top hitse value%identityAlignment
AT2G07734.1 Alpha-L RNA-binding motif/Ribosomal protein S4 family protein8.0e-0543.4Show/hide
Query:  EMRLDNILFRLGMASTIPQARQLVNHRHILVNGSIVDIPSYRCKPRDIITGKE
        E R D I  RL    TIPQARQ ++HR + VN  +V I  ++    DII+ +E
Subjt:  EMRLDNILFRLGMASTIPQARQLVNHRHILVNGSIVDIPSYRCKPRDIITGKE

AT5G39850.1 Ribosomal protein S46.7e-0430.93Show/hide
Query:  SRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTGQVLL----QLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGSIVDIPSY
        SR    ++  + L+EK   R   G    + +    +  + +     VL       LE RL  I+F+ GMA +I  AR L+  RHI V   +V+IPS+
Subjt:  SRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTGQVLL----QLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGSIVDIPSY

ATCG00380.1 chloroplast ribosomal protein S42.7e-9387.56Show/hide
Query:  MSRYRGPRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGM
        MSRYRGPRFKKIRRLGALPGLTSKRPK G+DL+NQSRS KKSQYRIRLEEKQKLRFHYGLTE QLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGM
Subjt:  MSRYRGPRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGM

Query:  ASTIPQARQLVNHRHILVNGSIVDIPSYRCKPRDIITGKEEKKSRALIQNYLDSSPPQELPKHLTLQPLQYKGLVNQIIDSKWVSLKINELLVVEYYSRQ
        A TIPQARQLVNH HILVNG IVDIPSYRCKPRDIIT K+E+ SR L+QN LDSS P+ELP HLTL   QY+GLVNQIID K V LKINELLVVEYYSRQ
Subjt:  ASTIPQARQLVNHRHILVNGSIVDIPSYRCKPRDIITGKEEKKSRALIQNYLDSSPPQELPKHLTLQPLQYKGLVNQIIDSKWVSLKINELLVVEYYSRQ

Query:  T
        T
Subjt:  T

ATMG00290.1 mitochondrial ribosomal protein S48.0e-0543.4Show/hide
Query:  EMRLDNILFRLGMASTIPQARQLVNHRHILVNGSIVDIPSYRCKPRDIITGKE
        E R D I  RL    TIPQARQ ++HR + VN  +V I  ++    DII+ +E
Subjt:  EMRLDNILFRLGMASTIPQARQLVNHRHILVNGSIVDIPSYRCKPRDIITGKE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGCGTTACAGAGGGCCTCGTTTCAAAAAAATACGCCGTCTGGGGGCTTTACCGGGACTAACTAGTAAAAGGCCCAAAACCGGAAACGATCTTAAAAACCAATCGCG
TTCCGGTAAAAAATCTCAATATCGTATTCGTTTAGAAGAAAAACAAAAATTGCGTTTTCATTATGGTCTTACAGAACGACAATTACTTAAATACGTTCGTATCGCCGGAA
AAGCCAAAGGATCAACGGGTCAAGTTTTACTACAATTACTTGAAATGCGGTTGGATAACATCCTTTTTAGATTGGGTATGGCTTCGACTATTCCTCAAGCCCGCCAATTA
GTTAATCATAGACATATTTTAGTTAATGGTTCTATAGTGGATATACCAAGTTATCGTTGCAAACCCCGAGATATTATTACAGGAAAGGAGGAAAAAAAATCGAGAGCACT
GATTCAAAATTATCTTGATTCATCCCCCCCTCAGGAATTGCCAAAACATTTGACTCTTCAGCCATTGCAATATAAAGGATTAGTCAATCAAATAATAGATAGTAAATGGG
TCAGTTTGAAAATAAATGAATTGCTCGTTGTAGAATATTATTCTCGTCAGACTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCGCGTTACAGAGGGCCTCGTTTCAAAAAAATACGCCGTCTGGGGGCTTTACCGGGACTAACTAGTAAAAGGCCCAAAACCGGAAACGATCTTAAAAACCAATCGCG
TTCCGGTAAAAAATCTCAATATCGTATTCGTTTAGAAGAAAAACAAAAATTGCGTTTTCATTATGGTCTTACAGAACGACAATTACTTAAATACGTTCGTATCGCCGGAA
AAGCCAAAGGATCAACGGGTCAAGTTTTACTACAATTACTTGAAATGCGGTTGGATAACATCCTTTTTAGATTGGGTATGGCTTCGACTATTCCTCAAGCCCGCCAATTA
GTTAATCATAGACATATTTTAGTTAATGGTTCTATAGTGGATATACCAAGTTATCGTTGCAAACCCCGAGATATTATTACAGGAAAGGAGGAAAAAAAATCGAGAGCACT
GATTCAAAATTATCTTGATTCATCCCCCCCTCAGGAATTGCCAAAACATTTGACTCTTCAGCCATTGCAATATAAAGGATTAGTCAATCAAATAATAGATAGTAAATGGG
TCAGTTTGAAAATAAATGAATTGCTCGTTGTAGAATATTATTCTCGTCAGACTTAAACCTAACTAAAAAACAAG
Protein sequenceShow/hide protein sequence
MSRYRGPRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPQARQL
VNHRHILVNGSIVDIPSYRCKPRDIITGKEEKKSRALIQNYLDSSPPQELPKHLTLQPLQYKGLVNQIIDSKWVSLKINELLVVEYYSRQT