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Sed0008334 (gene) of Chayote v1 genome

Gene IDSed0008334
OrganismSechium edule (Chayote v1)
Descriptionexpressed protein localized to the inner membrane of the chloroplast.
Genome locationLG01:2644291..2649660
RNA-Seq ExpressionSed0008334
SyntenySed0008334
Gene Ontology termsGO:0009706 - chloroplast inner membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7010970.1 hypothetical protein SDJN02_27768, partial [Cucurbita argyrosperma subsp. argyrosperma]4.1e-6785.99Show/hide
Query:  MAASFAPSLSVSGGLVKASDLSSKSISFGKTPKLAVQKKCLKTNHKLSVRAEYND-GRNGGGDFVAGFLLGGAVFGTLAYIFAPQIRRSVLNEDESGFRK
        MAA FAPSLSVSGGL+KASDLSSKSISFG+ PKLA+Q+KC +TNHKLSVRAEYND GRNGGG+FVAGFLLGGAVFGTLAYIFAPQIRRS+LNEDE GFR+
Subjt:  MAASFAPSLSVSGGLVKASDLSSKSISFGKTPKLAVQKKCLKTNHKLSVRAEYND-GRNGGGDFVAGFLLGGAVFGTLAYIFAPQIRRSVLNEDESGFRK

Query:  AKRPIYYDEGLEKTRETLNAKIGQLNSAIDNVSSRLRGGKNTPAVPVEDDSEIEATM
        A+RPIYYD+GLEKTR+TLN KIGQLNSAIDNVSSRLRGG  TP+VPVE D EIEATM
Subjt:  AKRPIYYDEGLEKTRETLNAKIGQLNSAIDNVSSRLRGGKNTPAVPVEDDSEIEATM

XP_008459202.1 PREDICTED: uncharacterized protein LOC103498395 [Cucumis melo]4.1e-6786.08Show/hide
Query:  MAASFAPSLSVSGGLVKASDLSSKSISFGKTPKLAVQKKCLKTNHKLSVRAEYND-GRNGGGDFVAGFLLGGAVFGTLAYIFAPQIRRSVLNEDESGFRK
        MAA FAPSLSVSGGL+KASDLSSKS+SFG+TPKLA+++KC KTNHKLSVRAEYND GR+GGGDFVAGFLLGGAVFGTLAY+FAPQIRRS+LNEDE GFR+
Subjt:  MAASFAPSLSVSGGLVKASDLSSKSISFGKTPKLAVQKKCLKTNHKLSVRAEYND-GRNGGGDFVAGFLLGGAVFGTLAYIFAPQIRRSVLNEDESGFRK

Query:  AKRPIYYDEGLEKTRETLNAKIGQLNSAIDNVSSRLRGGKNTPAVPVED-DSEIEATM
        AKRP+YYDEGLEKTR+TLNAKI QLNSAIDNVSSRLRGG NTPAVPVE+ + EIEATM
Subjt:  AKRPIYYDEGLEKTRETLNAKIGQLNSAIDNVSSRLRGGKNTPAVPVED-DSEIEATM

XP_022148671.1 uncharacterized protein LOC111017273 [Momordica charantia]2.6e-6989.1Show/hide
Query:  MAASFAPSLSVSGGLVKASDLSSKSISFGKTPKLAVQKKCLKTNHKLSVRAEYNDGRNGGGDFVAGFLLGGAVFGTLAYIFAPQIRRSVLNEDESGFRKA
        MAA FAPSLSVSGGL+KASDLSSKSI+FG+ PKLA+QKKCL+TN KLSVRAEYNDGR GGGDFVAGFLLGGAVFGTLAYIFAPQIRRS+LNEDE GFR+A
Subjt:  MAASFAPSLSVSGGLVKASDLSSKSISFGKTPKLAVQKKCLKTNHKLSVRAEYNDGRNGGGDFVAGFLLGGAVFGTLAYIFAPQIRRSVLNEDESGFRKA

Query:  KRPIYYDEGLEKTRETLNAKIGQLNSAIDNVSSRLRGGKNTPAVPVEDDSEIEATM
        KRPIYYDEGLEKTR+TLNAKIGQLNSAIDNVSSRLRGG NTPAVPVE D E EATM
Subjt:  KRPIYYDEGLEKTRETLNAKIGQLNSAIDNVSSRLRGGKNTPAVPVEDDSEIEATM

XP_022944447.1 uncharacterized protein LOC111448897 [Cucurbita moschata]7.0e-6785.99Show/hide
Query:  MAASFAPSLSVSGGLVKASDLSSKSISFGKTPKLAVQKKCLKTNHKLSVRAEYND-GRNGGGDFVAGFLLGGAVFGTLAYIFAPQIRRSVLNEDESGFRK
        MAA FAPSLSVSGGL+KASDLSSKSISFG+ PKLA+Q+KC +T+HKLSVRAEYND GRNGGG+FVAGFLLGGAVFGTLAYIFAPQIRRS+LNEDE GFR+
Subjt:  MAASFAPSLSVSGGLVKASDLSSKSISFGKTPKLAVQKKCLKTNHKLSVRAEYND-GRNGGGDFVAGFLLGGAVFGTLAYIFAPQIRRSVLNEDESGFRK

Query:  AKRPIYYDEGLEKTRETLNAKIGQLNSAIDNVSSRLRGGKNTPAVPVEDDSEIEATM
        A+RPIYYD+GLEKTR+TLN KIGQLNSAIDNVSSRLRGG  TPAVPVE D EIEATM
Subjt:  AKRPIYYDEGLEKTRETLNAKIGQLNSAIDNVSSRLRGGKNTPAVPVEDDSEIEATM

XP_023512433.1 uncharacterized protein LOC111777191 [Cucurbita pepo subsp. pepo]1.8e-6786.62Show/hide
Query:  MAASFAPSLSVSGGLVKASDLSSKSISFGKTPKLAVQKKCLKTNHKLSVRAEYND-GRNGGGDFVAGFLLGGAVFGTLAYIFAPQIRRSVLNEDESGFRK
        MAA FAPSLSVSGGL+KASDLSSKSISFG+TPKLA+Q+KC +TNHKLSVRAEYND GR+GGG+FVAGFLLGGAVFGTLAYIFAPQIRRS+LNEDE GFR+
Subjt:  MAASFAPSLSVSGGLVKASDLSSKSISFGKTPKLAVQKKCLKTNHKLSVRAEYND-GRNGGGDFVAGFLLGGAVFGTLAYIFAPQIRRSVLNEDESGFRK

Query:  AKRPIYYDEGLEKTRETLNAKIGQLNSAIDNVSSRLRGGKNTPAVPVEDDSEIEATM
        A+RPIYYD+GLEKTR+TLN KIGQLNSAIDNVSSRLRGG  TPAVPVE D EIEATM
Subjt:  AKRPIYYDEGLEKTRETLNAKIGQLNSAIDNVSSRLRGGKNTPAVPVEDDSEIEATM

TrEMBL top hitse value%identityAlignment
A0A1S3C9M4 uncharacterized protein LOC1034983952.0e-6786.08Show/hide
Query:  MAASFAPSLSVSGGLVKASDLSSKSISFGKTPKLAVQKKCLKTNHKLSVRAEYND-GRNGGGDFVAGFLLGGAVFGTLAYIFAPQIRRSVLNEDESGFRK
        MAA FAPSLSVSGGL+KASDLSSKS+SFG+TPKLA+++KC KTNHKLSVRAEYND GR+GGGDFVAGFLLGGAVFGTLAY+FAPQIRRS+LNEDE GFR+
Subjt:  MAASFAPSLSVSGGLVKASDLSSKSISFGKTPKLAVQKKCLKTNHKLSVRAEYND-GRNGGGDFVAGFLLGGAVFGTLAYIFAPQIRRSVLNEDESGFRK

Query:  AKRPIYYDEGLEKTRETLNAKIGQLNSAIDNVSSRLRGGKNTPAVPVED-DSEIEATM
        AKRP+YYDEGLEKTR+TLNAKI QLNSAIDNVSSRLRGG NTPAVPVE+ + EIEATM
Subjt:  AKRPIYYDEGLEKTRETLNAKIGQLNSAIDNVSSRLRGGKNTPAVPVED-DSEIEATM

A0A5D3CQ66 Uncharacterized protein2.0e-6786.08Show/hide
Query:  MAASFAPSLSVSGGLVKASDLSSKSISFGKTPKLAVQKKCLKTNHKLSVRAEYND-GRNGGGDFVAGFLLGGAVFGTLAYIFAPQIRRSVLNEDESGFRK
        MAA FAPSLSVSGGL+KASDLSSKS+SFG+TPKLA+++KC KTNHKLSVRAEYND GR+GGGDFVAGFLLGGAVFGTLAY+FAPQIRRS+LNEDE GFR+
Subjt:  MAASFAPSLSVSGGLVKASDLSSKSISFGKTPKLAVQKKCLKTNHKLSVRAEYND-GRNGGGDFVAGFLLGGAVFGTLAYIFAPQIRRSVLNEDESGFRK

Query:  AKRPIYYDEGLEKTRETLNAKIGQLNSAIDNVSSRLRGGKNTPAVPVED-DSEIEATM
        AKRP+YYDEGLEKTR+TLNAKI QLNSAIDNVSSRLRGG NTPAVPVE+ + EIEATM
Subjt:  AKRPIYYDEGLEKTRETLNAKIGQLNSAIDNVSSRLRGGKNTPAVPVED-DSEIEATM

A0A6J1D647 uncharacterized protein LOC1110172731.2e-6989.1Show/hide
Query:  MAASFAPSLSVSGGLVKASDLSSKSISFGKTPKLAVQKKCLKTNHKLSVRAEYNDGRNGGGDFVAGFLLGGAVFGTLAYIFAPQIRRSVLNEDESGFRKA
        MAA FAPSLSVSGGL+KASDLSSKSI+FG+ PKLA+QKKCL+TN KLSVRAEYNDGR GGGDFVAGFLLGGAVFGTLAYIFAPQIRRS+LNEDE GFR+A
Subjt:  MAASFAPSLSVSGGLVKASDLSSKSISFGKTPKLAVQKKCLKTNHKLSVRAEYNDGRNGGGDFVAGFLLGGAVFGTLAYIFAPQIRRSVLNEDESGFRKA

Query:  KRPIYYDEGLEKTRETLNAKIGQLNSAIDNVSSRLRGGKNTPAVPVEDDSEIEATM
        KRPIYYDEGLEKTR+TLNAKIGQLNSAIDNVSSRLRGG NTPAVPVE D E EATM
Subjt:  KRPIYYDEGLEKTRETLNAKIGQLNSAIDNVSSRLRGGKNTPAVPVEDDSEIEATM

A0A6J1FVP6 uncharacterized protein LOC1114488973.4e-6785.99Show/hide
Query:  MAASFAPSLSVSGGLVKASDLSSKSISFGKTPKLAVQKKCLKTNHKLSVRAEYND-GRNGGGDFVAGFLLGGAVFGTLAYIFAPQIRRSVLNEDESGFRK
        MAA FAPSLSVSGGL+KASDLSSKSISFG+ PKLA+Q+KC +T+HKLSVRAEYND GRNGGG+FVAGFLLGGAVFGTLAYIFAPQIRRS+LNEDE GFR+
Subjt:  MAASFAPSLSVSGGLVKASDLSSKSISFGKTPKLAVQKKCLKTNHKLSVRAEYND-GRNGGGDFVAGFLLGGAVFGTLAYIFAPQIRRSVLNEDESGFRK

Query:  AKRPIYYDEGLEKTRETLNAKIGQLNSAIDNVSSRLRGGKNTPAVPVEDDSEIEATM
        A+RPIYYD+GLEKTR+TLN KIGQLNSAIDNVSSRLRGG  TPAVPVE D EIEATM
Subjt:  AKRPIYYDEGLEKTRETLNAKIGQLNSAIDNVSSRLRGGKNTPAVPVEDDSEIEATM

A0A6J1L384 uncharacterized protein LOC1114999959.8e-6787.82Show/hide
Query:  MAASFAPSLSVSGGLVKASDLSSKSISFGKTPKLAVQKKCLKTNHKLSVRAEYND-GRNGGGDFVAGFLLGGAVFGTLAYIFAPQIRRSVLNEDESGFRK
        MAA F+PSLSVSGGL+KASDLSSKSISFG  PKL+VQ KC KTNHKLSVRAEYND GR+GGGDFVAGFLLGGAVFGTLAY+FAPQIRRS+LNE+E GF++
Subjt:  MAASFAPSLSVSGGLVKASDLSSKSISFGKTPKLAVQKKCLKTNHKLSVRAEYND-GRNGGGDFVAGFLLGGAVFGTLAYIFAPQIRRSVLNEDESGFRK

Query:  AKRPIYYDEGLEKTRETLNAKIGQLNSAIDNVSSRLRGGKNTPAVPVEDDSEIEAT
        AKRPIYYDEGLEKTRETLNAKIGQLNSAIDNVSSRLRGGKNTPAVPVE D E+EAT
Subjt:  AKRPIYYDEGLEKTRETLNAKIGQLNSAIDNVSSRLRGGKNTPAVPVEDDSEIEAT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G42960.1 expressed protein localized to the inner membrane of the chloroplast.4.1e-1739.26Show/hide
Query:  SISFGKTPKLAVQKKCLKTNHKLSVRAEY--NDGRNGGGDFVAGFLLGGAVFGTLAYIFAPQIRRSVLNEDESGFRKAKRPIYYDE--GLEKTRETLNAK
        S+SFG      +     +T   L++++ Y  +DG    G FV GF+LGG + G L  ++APQI +++   D     +      YDE   LEKTR+ L  K
Subjt:  SISFGKTPKLAVQKKCLKTNHKLSVRAEY--NDGRNGGGDFVAGFLLGGAVFGTLAYIFAPQIRRSVLNEDESGFRKAKRPIYYDE--GLEKTRETLNAK

Query:  IGQLNSAIDNVSSRLRGGKNTPAVPVEDDSEIEAT
        I QLNSAID+VSS+L+  ++TP        EIEAT
Subjt:  IGQLNSAIDNVSSRLRGGKNTPAVPVEDDSEIEAT

AT3G02900.1 unknown protein4.2e-3859.15Show/hide
Query:  MAASFAPSLSVSGGLVKASDLSSKSISFGKTPKLAVQKKCLKTNHKLSVRAEYNDGRNGGG--DFVAGFLLGGAVFGTLAYIFAPQIRRSVLNEDESGFR
        MA+  A  +S SG     +  +  +I   K+  L VQ K    +HKLSV A Y  G  GGG  DFV GFLLG AVFGTLAYIFAPQIRRSVL+E+E GF+
Subjt:  MAASFAPSLSVSGGLVKASDLSSKSISFGKTPKLAVQKKCLKTNHKLSVRAEYNDGRNGGG--DFVAGFLLGGAVFGTLAYIFAPQIRRSVLNEDESGFR

Query:  KAKRPIYYDEGLEKTRETLNAKIGQLNSAIDNVSSRLRGG-----KNT--PAVPVEDDSEIEAT
        K ++P+YYDEGLE+ RE LN KIGQLNSAID VSSRL+GG     KNT  P+VPVE D+E EAT
Subjt:  KAKRPIYYDEGLEKTRETLNAKIGQLNSAIDNVSSRLRGG-----KNT--PAVPVEDDSEIEAT

AT3G02900.2 unknown protein8.6e-3966.67Show/hide
Query:  KTPKLAVQKKCLKTNHKLSVRAEYNDGRNGGG--DFVAGFLLGGAVFGTLAYIFAPQIRRSVLNEDESGFRKAKRPIYYDEGLEKTRETLNAKIGQLNSA
        K+  L VQ K    +HKLSV A Y  G  GGG  DFV GFLLG AVFGTLAYIFAPQIRRSVL+E+E GF+K ++P+YYDEGLE+ RE LN KIGQLNSA
Subjt:  KTPKLAVQKKCLKTNHKLSVRAEYNDGRNGGG--DFVAGFLLGGAVFGTLAYIFAPQIRRSVLNEDESGFRKAKRPIYYDEGLEKTRETLNAKIGQLNSA

Query:  IDNVSSRLRGG-----KNT--PAVPVEDDSEIEAT
        ID VSSRL+GG     KNT  P+VPVE D+E EAT
Subjt:  IDNVSSRLRGG-----KNT--PAVPVEDDSEIEAT

AT5G16660.1 unknown protein1.2e-4064.29Show/hide
Query:  MAASFAPS-LSVSG----GLVKASDLS--SKSISFGKTPKLAVQKKCLKTNHKLSVRAEYNDGRNGG--GDFVAGFLLGGAVFGTLAYIFAPQIRRSVLN
        MA+  A + LS+SG      VKA+ LS  +K  S  KT  L + KK  +T  K SV A Y DG   G  GDF+AGFLLGGAVFG +AYIFAPQIRRSVLN
Subjt:  MAASFAPS-LSVSG----GLVKASDLS--SKSISFGKTPKLAVQKKCLKTNHKLSVRAEYNDGRNGG--GDFVAGFLLGGAVFGTLAYIFAPQIRRSVLN

Query:  -EDESGFRKAKRPIYYDEGLEKTRETLNAKIGQLNSAIDNVSSRLRG-GKNTPA--VPVEDDSEIEAT
         EDE GF K K+P YYDEGLEKTRETLN KIGQLNSAIDNVSSRLRG  KNT +  VPVE D E+EAT
Subjt:  -EDESGFRKAKRPIYYDEGLEKTRETLNAKIGQLNSAIDNVSSRLRG-GKNTPA--VPVEDDSEIEAT

AT5G16660.2 unknown protein1.1e-3862.65Show/hide
Query:  MAASFAPS-LSVSG----GLVKASDLS--SKSISFGKTPKLAVQKKCLKTNHKLSVRAEYNDGRNGGGDFVAGFLLGGAVFGTLAYIFAPQIRRSVLN-E
        MA+  A + LS+SG      VKA+ LS  +K  S  KT  L + KK  +T  K SV A         GDF+AGFLLGGAVFG +AYIFAPQIRRSVLN E
Subjt:  MAASFAPS-LSVSG----GLVKASDLS--SKSISFGKTPKLAVQKKCLKTNHKLSVRAEYNDGRNGGGDFVAGFLLGGAVFGTLAYIFAPQIRRSVLN-E

Query:  DESGFRKAKRPIYYDEGLEKTRETLNAKIGQLNSAIDNVSSRLRG-GKNTPA--VPVEDDSEIEAT
        DE GF K K+P YYDEGLEKTRETLN KIGQLNSAIDNVSSRLRG  KNT +  VPVE D E+EAT
Subjt:  DESGFRKAKRPIYYDEGLEKTRETLNAKIGQLNSAIDNVSSRLRG-GKNTPA--VPVEDDSEIEAT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGCCAGCTTTGCTCCTTCGCTCTCAGTATCTGGGGGATTGGTTAAGGCCTCAGATCTGTCCTCAAAGTCCATTTCCTTTGGAAAAACACCAAAACTCGCCGTTCA
GAAGAAATGCTTGAAAACCAACCACAAGTTATCAGTCCGTGCTGAGTACAATGATGGTAGAAATGGAGGTGGGGACTTTGTTGCTGGTTTTCTTCTTGGGGGTGCTGTAT
TTGGAACCTTAGCTTACATTTTTGCCCCGCAGATCAGAAGATCTGTACTAAATGAAGATGAGTCCGGATTTAGGAAGGCTAAGCGTCCCATCTACTACGACGAAGGTCTA
GAGAAAACGAGAGAGACGTTGAATGCAAAAATAGGGCAATTGAATTCTGCCATTGACAATGTATCTTCACGTCTGAGAGGTGGCAAAAATACTCCAGCTGTGCCAGTTGA
AGATGATTCTGAGATTGAAGCTACCATGTAA
mRNA sequenceShow/hide mRNA sequence
GAGAGACACAACAAACCCTAATAGGTTCAGTGCACTGCCCTTCTTGTCAATAGATAGAAGTTAGATATTATAATTCTAAAAAAAAAGGTTAAATATTAAAAAATAAAAAA
GTATTAGAAGTCAATAAGAAACCAGTTATCTTCAACACTCTAACTTGCGCTTTCTTCTTCGTTTCTCTCCAATTTCTTTGATTTCTCTGTAAATCTCTGCTCTCCTTCTT
CCACATGGCCGCCAGCTTTGCTCCTTCGCTCTCAGTATCTGGGGGATTGGTTAAGGCCTCAGATCTGTCCTCAAAGTCCATTTCCTTTGGAAAAACACCAAAACTCGCCG
TTCAGAAGAAATGCTTGAAAACCAACCACAAGTTATCAGTCCGTGCTGAGTACAATGATGGTAGAAATGGAGGTGGGGACTTTGTTGCTGGTTTTCTTCTTGGGGGTGCT
GTATTTGGAACCTTAGCTTACATTTTTGCCCCGCAGATCAGAAGATCTGTACTAAATGAAGATGAGTCCGGATTTAGGAAGGCTAAGCGTCCCATCTACTACGACGAAGG
TCTAGAGAAAACGAGAGAGACGTTGAATGCAAAAATAGGGCAATTGAATTCTGCCATTGACAATGTATCTTCACGTCTGAGAGGTGGCAAAAATACTCCAGCTGTGCCAG
TTGAAGATGATTCTGAGATTGAAGCTACCATGTAAATTCAACTTAAACATGAACTCATCATATGATTGAACAGGTTTGAAGTTTCTTCTTCTTTGAGACCCTATCATCAT
ATGGCAATATTCCACAATTTTTTGTTTCGAATTTTTTGGATTCAGCAAATTCAAAATGGGATGTTACACTTAGCATTGTTGGAAATATTTGAAGATAAGTACTTTAGAAT
TTCCTTTTGAATTCACTACTAAATTTCAGTTTGAGACCTAAATTTTTATATTTAGTTGCCAAAATGAGCATGTATATTTGACTTAGAGGTTATAGATTTGAATCTTACTG
TC
Protein sequenceShow/hide protein sequence
MAASFAPSLSVSGGLVKASDLSSKSISFGKTPKLAVQKKCLKTNHKLSVRAEYNDGRNGGGDFVAGFLLGGAVFGTLAYIFAPQIRRSVLNEDESGFRKAKRPIYYDEGL
EKTRETLNAKIGQLNSAIDNVSSRLRGGKNTPAVPVEDDSEIEATM